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natural_source_ncbi_code:"11976"

Filter By

Current Database

  • EMDB [15]

Current status

  • REL [15]

Sample type

  • Virus [13]
  • Sample [8]
  • Protein [7]
  • Complex [2]
  • Ligand [1]
  • RNA [1]

Organism

  • Rabbit hemorrhagic disease virus [15]
  • Oryctolagus cuniculus [3]
  • Lagovirus europaeus [1]

EM Method

  • Single-particle [15]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [5]
  • ≥ 6Å and < 8Å [1]
  • ≥ 8Å and < 12Å [4]
  • ≥ 12Å and < 16Å [1]
  • ≥ 20Å and < 30Å [2]

Model molecular weight

  • 50-100 kDa [1]
  • 1-2 MDa [2]
  • > 10 MDa [6]

Release Date

  • 2025 [7]
  • 2013 [1]
  • 2012 [7]

Author by name

  • Barcena J [13]
  • Caston JR [12]
  • Angulo I [7]
  • Carrascosa JL [7]
  • Chichon J [7]
  • Gomez-blanco J [7]
  • Gonzalez JM [7]
  • Luque D [7]
  • Marabini R [7]
  • Mena I [7]
  • Trus BL [7]
  • Verdaguer N [7]
  • Martinez-romero JM [6]
  • Novoa G [6]
  • Perez-mata C [6]
  • Baker TS [1]
  • Gao B [1]
  • Hu Z [1]
  • J Chichon J [1]
  • Kieft JS [1]
  • Langeberg CJ [1]
  • Liu J [1]
  • Liu Y [1]
  • Ma J [1]
  • Pang H [1]
  • Pang X [1]
  • Schulten K [1]
  • Segar KE [1]
  • Sherlock ME [1]
  • Sun F [1]
  • Wang X [1]
  • Xu F [1]
  • Zhai Y [1]
  • Zhang K [1]
  • Zheng D [1]

Author by ORCID

  • Barcena J [13]
  • Caston JR [12]
  • Mena I [7]
  • Gonzalez JM [7]
  • Marabini R [7]
  • Verdaguer N [7]
  • Luque D [7]
  • Gomez-blanco J [7]
  • Martinez-romero JM [6]
  • Novoa G [6]
  • Perez-mata C [6]
  • Baker TS [1]
  • Zhang K [1]
  • Kieft JS [1]
  • Langeberg CJ [1]
  • Sherlock ME [1]

Journal

  • J VIROL [7]
  • TO BE PUBLISHED [6]
  • CELL REP [1]
  • PLOS PATHOG [1]

Software

  • XMIPP [7]
  • CRYOSPARC [2]
  • CHIMERA [1]
  • EMAN1.9, SPIDER [1]
  • RELION [1]

Microscope

  • FEI TECNAI F20 [7]
  • TFS KRIOS [3]
  • TFS TALOS [3]
  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [15]

Film or detector model

  • KODAK SO-163 FILM [7]
  • FEI FALCON III 4K X 4K [4]
  • GATAN K2 SUMMIT 4K X 4K [2]
  • FEI FALCON IV 4K X 4K [1]
  • GATAN ULTRASCAN 4000 4K X 4K [1]

External links

  • PDB [9]
  • PDBe-Kb [7]
  • UniProt [7]
  • Pfam [6]
  • AlphaFold DB [1]
  • ChEBI [1]
  • ChEMBL [1]
  • DrugBank [1]
  • Gene Ontology [1]
  • InterPro [1]
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EMD-52727
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3D View
AB Spike of RHDV mutant N15
Release date: Dec. 3, 2025
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9i8j
Q-score: 0.397

Novoa G, Martinez-Romero JM, Perez-Mata C, Barcena J, Caston JR

To Be Published

EMD-52588
Download Map
3D View
Capsid of RHDV mutant - 29N
Release date: Nov. 26, 2025
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9i3e
Q-score: 0.536

Novoa G, Martinez-Romero JM, Perez-Mata C, Barcena J

To Be Published

EMD-52593
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3D View
Capsid of RHDV mutant - N15
Release date: Nov. 26, 2025
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 9i3h
Q-score: 0.505

Novoa G, Martinez-Romero JM, Perez-Mata C, Barcena J, Caston JR

To Be Published

EMD-52733
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3D View
Capsid of RHDV VLP VP1
Release date: Nov. 26, 2025
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9i8r
Q-score: 0.413

Novoa G, Martinez-Romero JM, Perez-Mata C, Barcena J, Caston JR

To Be Published

EMD-52747
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3D View
Capsid of empty RHDV virion
Release date: Nov. 26, 2025
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9i90
Q-score: 0.414

Novoa G, Martinez-Romero JM, Perez-Mata C, Barcena J, Caston JR

To Be Published

EMD-52757
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3D View
Capsid of RHDV virion full particle
Release date: Nov. 26, 2025
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9i9d
Q-score: 0.374

Novoa G, Martinez-Romero JM, Perez-Mata C, Barcena J, Caston JR

To Be Published

EMD-45307
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3D View
Rabbit Hemorrhagic Disease Virus reinitiation stimulating TURBS RNA bound to rabbit ribosome
Release date: Feb. 19, 2025
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9c8k
Q-score: 0.256

Sherlock ME, Langeberg CJ, Segar KE, Kieft JS

Cell Rep (2025) 44 pp. 115236-115236 [ Pubmed: 39893634 DOI: doi:10.1016/j.celrep.2025.115236 ]

EMD-5410
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Cryo-electron microscopic reconstruction of wild rabbit hemorrhagic disease virus
Release date: Jan. 30, 2013
Resolution: 6.5 Å
EM Method: Single-particle
Fitted PDBs: 3j1p
Q-score: 0.238

Wang X, Xu F, Liu J, Gao B, Liu Y, Zhai Y, Ma J, Zhang K, Baker TS, Schulten K, Zheng D, Pang H, Sun F

PLoS Pathog (2013) 9 pp. e1003132-e1003132 [ DOI: doi:10.1371/journal.ppat.1003132 Pubmed: 23341770 ]

EMD-1933
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wt Rabbit Hemorrhagic Disease Virus RHDV capsid
Release date: July 25, 2012
Resolution: 10.3 Å
EM Method: Single-particle
Fitted PDBs: 3zue
Q-score: 0.039

Luque D, Gonzalez JM, Gomez-Blanco J, Marabini R, Chichon J, Mena I, Angulo I, Carrascosa JL, Verdaguer N, Trus BL, Barcena J, Caston JR

J Virol (2012) 86 pp. 6470-6480 [ DOI: doi:10.1128/JVI.07050-11 Pubmed: 22491457 ]

EMD-1934
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3D View
L17 Rabbit Hemorrhagic Disease Virus RHDV capsid
Release date: May 17, 2012
Resolution: 9.9 Å
EM Method: Single-particle

Luque D, Gonzalez JM, Gomez-Blanco J, Marabini R, Chichon J, Mena I, Angulo I, Carrascosa JL, Verdaguer N, Trus BL, Barcena J, Caston JR

J Virol (2012) 86 pp. 6470-6480 [ DOI: doi:10.1128/JVI.07050-11 Pubmed: 22491457 ]

Sort by: Download
Showing 1 - 10 of 15. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [15]

Current status

  • REL [15]

Sample type

  • Virus [13]
  • Sample [8]
  • Protein [7]
  • Complex [2]
  • Ligand [1]
  • RNA [1]

Organism

  • Rabbit hemorrhagic disease virus [15]
  • Oryctolagus cuniculus [3]
  • Lagovirus europaeus [1]

EM Method

  • Single-particle [15]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [5]
  • ≥ 6Å and < 8Å [1]
  • ≥ 8Å and < 12Å [4]
  • ≥ 12Å and < 16Å [1]
  • ≥ 20Å and < 30Å [2]

Model molecular weight

  • 50-100 kDa [1]
  • 1-2 MDa [2]
  • > 10 MDa [6]

Release Date

  • 2025 [7]
  • 2013 [1]
  • 2012 [7]

Author by name

  • Barcena J [13]
  • Caston JR [12]
  • Angulo I [7]
  • Carrascosa JL [7]
  • Chichon J [7]
  • Gomez-blanco J [7]
  • Gonzalez JM [7]
  • Luque D [7]
  • Marabini R [7]
  • Mena I [7]
  • Trus BL [7]
  • Verdaguer N [7]
  • Martinez-romero JM [6]
  • Novoa G [6]
  • Perez-mata C [6]
  • Baker TS [1]
  • Gao B [1]
  • Hu Z [1]
  • J Chichon J [1]
  • Kieft JS [1]
  • Langeberg CJ [1]
  • Liu J [1]
  • Liu Y [1]
  • Ma J [1]
  • Pang H [1]
  • Pang X [1]
  • Schulten K [1]
  • Segar KE [1]
  • Sherlock ME [1]
  • Sun F [1]
  • Wang X [1]
  • Xu F [1]
  • Zhai Y [1]
  • Zhang K [1]
  • Zheng D [1]

Author by ORCID

  • Barcena J [13]
  • Caston JR [12]
  • Mena I [7]
  • Gonzalez JM [7]
  • Marabini R [7]
  • Verdaguer N [7]
  • Luque D [7]
  • Gomez-blanco J [7]
  • Martinez-romero JM [6]
  • Novoa G [6]
  • Perez-mata C [6]
  • Baker TS [1]
  • Zhang K [1]
  • Kieft JS [1]
  • Langeberg CJ [1]
  • Sherlock ME [1]

Journal

  • J VIROL [7]
  • TO BE PUBLISHED [6]
  • CELL REP [1]
  • PLOS PATHOG [1]

Software

  • XMIPP [7]
  • CRYOSPARC [2]
  • CHIMERA [1]
  • EMAN1.9, SPIDER [1]
  • RELION [1]

Microscope

  • FEI TECNAI F20 [7]
  • TFS KRIOS [3]
  • TFS TALOS [3]
  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [15]

Film or detector model

  • KODAK SO-163 FILM [7]
  • FEI FALCON III 4K X 4K [4]
  • GATAN K2 SUMMIT 4K X 4K [2]
  • FEI FALCON IV 4K X 4K [1]
  • GATAN ULTRASCAN 4000 4K X 4K [1]

External links

  • PDB [9]
  • PDBe-Kb [7]
  • UniProt [7]
  • Pfam [6]
  • AlphaFold DB [1]
  • ChEBI [1]
  • ChEMBL [1]
  • DrugBank [1]
  • Gene Ontology [1]
  • InterPro [1]