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natural_source_ncbi_code:"11888"

Filter By

Current Database

  • EMDB [32]

Current status

  • REL [32]

Sample type

  • Protein [30]
  • Virus [28]
  • Complex [3]
  • Ligand [2]
  • RNA [2]
  • DNA [1]
  • Sample [1]

Organism

  • Rous sarcoma virus [32]

EM Method

  • Subtomogram averaging [25]
  • Single-particle [6]
  • Tomography [1]

Resolution

  • ≥ 3Å and < 4Å [3]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [22]
  • ≥ 8Å and < 12Å [2]
  • ≥ 16Å and < 20Å [1]

Model molecular weight

  • 50-100 kDa [2]
  • 100-250 kDa [25]
  • 250-500 kDa [1]
  • 1-2 MDa [2]
  • 2-5 MDa [1]

Release Date

  • 2025 [2]
  • 2023 [1]
  • 2021 [28]
  • 2010 [1]

Author by name

  • Dick RA [28]
  • Feathers JR [28]
  • Johnson MC [28]
  • Klanschnig M [28]
  • Nikulin N [28]
  • Obr M [28]
  • Ricana CL [28]
  • Schur FKM [28]
  • Thader A [28]
  • Vogt VM [28]
  • Ferre-D Amare Ar [2]
  • Jones CP [2]
  • Aihara H [1]
  • Bera S [1]
  • Feathers J-PR [1]
  • Grandgenett DP [1]
  • Hyun JK [1]
  • Kingston RL [1]
  • Mitra AK [1]
  • Pandey KK [1]
  • Radjainia M [1]
  • Shi K [1]

Author by ORCID

  • Klanschnig M [28]
  • Ricana CL [28]
  • Schur FKM [28]
  • Jones CP [2]
  • Bera S [1]
  • Pandey KK [1]
  • Mitra AK [1]
  • Hyun JK [1]
  • Shi K [1]

Journal

  • NAT COMMUN [28]
  • J BIOL CHEM [2]
  • PNAS [2]

Software

  • IMOD [26]
  • DYNAMO [25]
  • MATLAB [25]
  • RELION [4]
  • CRYOSPARC [3]
  • AV3 [1]
  • BSOFT, PFT2, EM3DR2 [1]
  • CHIMERA,SCULPTOR [1]

Microscope

  • FEI TITAN KRIOS [28]
  • FEI TECNAI ARCTICA [2]
  • FEI TECNAI 12 [1]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [31]
  • LAB6 [1]

Film or detector model

  • GATAN K2 QUANTUM 4K X 4K [26]
  • GATAN K3 BIOQUANTUM 6K X 4K [4]
  • FEI FALCON IV 4K X 4K [1]
  • KODAK SO-163 FILM [1]

External links

  • PDB [31]
  • PDBe-Kb [30]
  • UniProt [30]
  • ChEBI [2]
  • DrugBank [2]
  • ChEMBL [1]
  • Gene Ontology [1]
  • InterPro [1]
  • Pfam [1]
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Showing 1 - 10 of 32. Page 1 of 4
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EMD-46905
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3D View
Rous sarcoma virus frameshifting pseudoknot RNA EM straight dimer
Release date: April 9, 2025
Resolution: 3.22 Å
EM Method: Single-particle
Fitted PDBs: 9dig
Q-score: 0.388

Jones CP, Ferre-D'Amare AR

PNAS (2025) 122 pp. e2418418122-e2418418122 [ Pubmed: 40172966 DOI: doi:10.1073/pnas.2418418122 ]

EMD-46906
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Rous sarcoma virus frameshifting pseudoknot RNA EM straight dimer
Release date: April 9, 2025
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 9dii
Q-score: 0.385

Jones CP, Ferre-D'Amare AR

PNAS (2025) 122 pp. e2418418122-e2418418122 [ Pubmed: 40172966 DOI: doi:10.1073/pnas.2418418122 ]

EMD-27823
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3D View
Cryo-EM structure of Rous sarcoma virus strand transfer complex
Release date: April 26, 2023
Resolution: 3.36 Å
EM Method: Single-particle
Fitted PDBs: 8e14
Q-score: 0.366

Bera S, Shi K, Aihara H, Grandgenett DP, Pandey KK

J Biol Chem (2023) 299 pp. 104730-104730 [ DOI: doi:10.1016/j.jbc.2023.104730 Pubmed: 37084813 ]

EMD-12774
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Cryo-electron tomogram of mature RSV CANC CLPs
Release date: April 28, 2021
EM Method: Tomography

Obr M, Ricana CL, Nikulin N, Feathers JR, Klanschnig M, Thader A, Johnson MC, Vogt VM, Schur FKM, Dick RA

Nat Commun (2021) 12 pp. 3226-3226 [ DOI: doi:10.1038/s41467-021-23506-0 Pubmed: 34050170 ]

EMD-12485
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Structure of the mature RSV CA lattice: T 1 CA icosahedron
Release date: April 21, 2021
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7no0
Q-score: 0.517

Obr M, Ricana CL, Nikulin N, Feathers JR, Klanschnig M, Thader A, Johnson MC, Vogt VM, Schur FKM, Dick RA

Nat Commun (2021) 12 pp. 3226-3226 [ DOI: doi:10.1038/s41467-021-23506-0 Pubmed: 34050170 ]

EMD-12486
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Structure of the mature RSV CA lattice: T 3 CA icosahedron
Release date: April 21, 2021
Resolution: 7.6 Å
EM Method: Single-particle
Fitted PDBs: 7no1
Q-score: 0.232

Obr M, Ricana CL, Nikulin N, Feathers JR, Klanschnig M, Thader A, Johnson MC, Vogt VM, Schur FKM, Dick RA

Nat Commun (2021) 12 pp. 3226-3226 [ DOI: doi:10.1038/s41467-021-23506-0 Pubmed: 34050170 ]

EMD-12487
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Structure of the mature RSV CA lattice: hexamer derived from tubes C2-symmetric
Release date: April 21, 2021
Resolution: 4.3 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7no2
Q-score: 0.39

Obr M, Ricana CL, Nikulin N, Feathers JR, Klanschnig M, Thader A, Johnson MC, Vogt VM, Schur FKM, Dick RA

Nat Commun (2021) 12 pp. 3226-3226 [ DOI: doi:10.1038/s41467-021-23506-0 Pubmed: 34050170 ]

EMD-12488
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Structure of the mature RSV CA lattice: pentamer derived from polyhedral VLPs
Release date: April 21, 2021
Resolution: 5.8 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7no3
Q-score: 0.28

Obr M, Ricana CL, Nikulin N, Feathers JR, Klanschnig M, Thader A, Johnson MC, Vogt VM, Schur FKM, Dick RA

Nat Commun (2021) 12 pp. 3226-3226 [ DOI: doi:10.1038/s41467-021-23506-0 Pubmed: 34050170 ]

EMD-12489
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3D View
Structure of the mature RSV CA lattice: hexamer with 3 adjacent pentamers C3 symmetric
Release date: April 21, 2021
Resolution: 7.5 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7no4
Q-score: 0.258

Obr M, Ricana CL, Nikulin N, Feathers JR, Klanschnig M, Thader A, Johnson MC, Vogt VM, Schur FKM, Dick RA

Nat Commun (2021) 12 pp. 3226-3226 [ DOI: doi:10.1038/s41467-021-23506-0 Pubmed: 34050170 ]

EMD-12490
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3D View
Structure of the mature RSV CA lattice: hexamer with 2 adjacent pentamers C2 symmetric
Release date: April 21, 2021
Resolution: 7.4 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7no5
Q-score: 0.235

Obr M, Ricana CL, Nikulin N, Feathers JR, Klanschnig M, Thader A, Johnson MC, Vogt VM, Schur FKM, Dick RA

Nat Commun (2021) 12 pp. 3226-3226 [ DOI: doi:10.1038/s41467-021-23506-0 Pubmed: 34050170 ]

Sort by: Download
Showing 1 - 10 of 32. Page 1 of 4
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [32]

Current status

  • REL [32]

Sample type

  • Protein [30]
  • Virus [28]
  • Complex [3]
  • Ligand [2]
  • RNA [2]
  • DNA [1]
  • Sample [1]

Organism

  • Rous sarcoma virus [32]

EM Method

  • Subtomogram averaging [25]
  • Single-particle [6]
  • Tomography [1]

Resolution

  • ≥ 3Å and < 4Å [3]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [22]
  • ≥ 8Å and < 12Å [2]
  • ≥ 16Å and < 20Å [1]

Model molecular weight

  • 50-100 kDa [2]
  • 100-250 kDa [25]
  • 250-500 kDa [1]
  • 1-2 MDa [2]
  • 2-5 MDa [1]

Release Date

  • 2025 [2]
  • 2023 [1]
  • 2021 [28]
  • 2010 [1]

Author by name

  • Dick RA [28]
  • Feathers JR [28]
  • Johnson MC [28]
  • Klanschnig M [28]
  • Nikulin N [28]
  • Obr M [28]
  • Ricana CL [28]
  • Schur FKM [28]
  • Thader A [28]
  • Vogt VM [28]
  • Ferre-D Amare Ar [2]
  • Jones CP [2]
  • Aihara H [1]
  • Bera S [1]
  • Feathers J-PR [1]
  • Grandgenett DP [1]
  • Hyun JK [1]
  • Kingston RL [1]
  • Mitra AK [1]
  • Pandey KK [1]
  • Radjainia M [1]
  • Shi K [1]

Author by ORCID

  • Klanschnig M [28]
  • Ricana CL [28]
  • Schur FKM [28]
  • Jones CP [2]
  • Bera S [1]
  • Pandey KK [1]
  • Mitra AK [1]
  • Hyun JK [1]
  • Shi K [1]

Journal

  • NAT COMMUN [28]
  • J BIOL CHEM [2]
  • PNAS [2]

Software

  • IMOD [26]
  • DYNAMO [25]
  • MATLAB [25]
  • RELION [4]
  • CRYOSPARC [3]
  • AV3 [1]
  • BSOFT, PFT2, EM3DR2 [1]
  • CHIMERA,SCULPTOR [1]

Microscope

  • FEI TITAN KRIOS [28]
  • FEI TECNAI ARCTICA [2]
  • FEI TECNAI 12 [1]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [31]
  • LAB6 [1]

Film or detector model

  • GATAN K2 QUANTUM 4K X 4K [26]
  • GATAN K3 BIOQUANTUM 6K X 4K [4]
  • FEI FALCON IV 4K X 4K [1]
  • KODAK SO-163 FILM [1]

External links

  • PDB [31]
  • PDBe-Kb [30]
  • UniProt [30]
  • ChEBI [2]
  • DrugBank [2]
  • ChEMBL [1]
  • Gene Ontology [1]
  • InterPro [1]
  • Pfam [1]