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natural_source_ncbi_code:"11137"

Filter By

Current Database

  • EMDB [16]

Current status

  • REL [16]

Sample type

  • Complex [16]
  • Protein [8]
  • Ligand [7]
  • RNA [1]

Organism

  • Human coronavirus 229e [16]
  • Homo sapiens [5]
  • Severe acute respiratory syndrome coronavirus [1]

EM Method

  • Single-particle [16]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [12]
  • ≥ 4Å and < 5Å [1]
  • ≥ 6Å and < 8Å [1]

Model molecular weight

  • 100-250 kDa [1]
  • 250-500 kDa [5]
  • 500-1000 kDa [2]

Release Date

  • 2025 [11]
  • 2023 [1]
  • 2021 [1]
  • 2020 [2]
  • 2019 [1]

Author by name

  • Chien YC [8]
  • Hsu MF [8]
  • Hsu SD [8]
  • Hsu STD [8]
  • Khoo KH [8]
  • Tsai YX [8]
  • Baric RS [3]
  • Cain DW [3]
  • Edwards RJ [3]
  • Froggatt HM [3]
  • Haynes BF [3]
  • Liccione MF [3]
  • Pajon C [3]
  • Saunders KO [3]
  • Scobey T [3]
  • Sheahan TP [3]
  • Spence TN [3]
  • Walter EB [3]
  • Wrapp D [3]
  • Yin Q [3]
  • Yount BL [3]
  • Chen Y [2]
  • Cheng C [2]
  • Ding W [2]
  • Fu ZF [2]
  • Huang X [2]
  • Liu ZJ [2]
  • Niu T [2]
  • Peng G [2]
  • Shi J [2]
  • Shi Y [2]
  • Song X [2]
  • Sun L [2]
  • Tan Y [2]
  • Xiao S [2]
  • Xiong Q [2]
  • Zhu Y [2]
  • Benlekbir S [1]
  • Cao Y [1]
  • Chiu W [1]
  • Das R [1]
  • Desforges M [1]
  • Du S [1]
  • Huang R [1]
  • Huang W [1]
  • Kretsch RC [1]
  • Li S [1]
  • Li Z [1]
  • Liu P [1]
  • Nye G [1]
  • Rini JM [1]
  • Rubinstein JL [1]
  • Talbot PJ [1]
  • Tomlinson ACA [1]
  • Wang Y [1]
  • Wong AHM [1]
  • Xiao J [1]
  • Xiao T [1]
  • Xie XS [1]
  • Xu L [1]
  • Yasimayi A [1]
  • Zhang K [1]
  • Zhang Z [1]
  • Zhang ZY [1]
  • Zheludev IN [1]
  • Zhou D [1]
  • Zhou X [1]

Author by ORCID

  • Chien YC [8]
  • Tsai YX [8]
  • Hsu SD [8]
  • Khoo KH [8]
  • Wrapp D [3]
  • Fu ZF [2]
  • Liu ZJ [2]
  • Chen Y [2]
  • Peng G [2]
  • Huang X [2]
  • Song X [2]
  • Zhu Y [2]
  • Xiao S [2]
  • Sun L [2]
  • Ding W [2]
  • Cao Y [1]
  • Das R [1]
  • Xie XS [1]
  • Li Z [1]
  • Wong AHM [1]
  • Wang Y [1]
  • Zhou X [1]
  • Rini JM [1]
  • Xu L [1]
  • Huang W [1]
  • Zhang Z [1]
  • Kretsch RC [1]
  • Li S [1]
  • Chiu W [1]
  • Zheludev IN [1]
  • Tomlinson ACA [1]
  • Zhang K [1]
  • Rubinstein JL [1]
  • Du S [1]
  • Xiao J [1]
  • Nye G [1]
  • Huang R [1]

Journal

  • NAT COMMUN [10]
  • TO BE PUBLISHED [3]
  • BIORXIV [1]
  • CELL RES [1]
  • ELIFE [1]

Software

  • CRYOSPARC [15]

Microscope

  • FEI TITAN KRIOS [12]
  • TFS KRIOS [4]

Electron Source

  • FIELD EMISSION GUN [16]

Film or detector model

  • GATAN K3 6K X 4K [8]
  • GATAN K3 BIOQUANTUM 6K X 4K [4]
  • GATAN K2 SUMMIT 4K X 4K [2]
  • FEI FALCON III 4K X 4K [1]
  • FEI FALCON IV 4K X 4K [1]

External links

  • Gene Ontology [8]
  • PDB [8]
  • PDBe-Kb [8]
  • Pfam [8]
  • UniProt [8]
  • ChEBI [7]
  • ChEMBL [7]
  • AlphaFold DB [5]
  • InterPro [5]
  • Complex Portal [1]
Sort by: Download
Showing 1 - 10 of 16. Page 1 of 2
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Preview first 10
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EMD-70440
Download Map
3D View
HCoV-229E S2P bound by three DH1533 Fabs
Release date: Dec. 3, 2025
Resolution: 2.82 Å
EM Method: Single-particle
Fitted PDBs: 9ofo
Q-score: 0.528

Liccione MF, Scobey T, Froggatt HM, Pajon C, Yount BL, Yin Q, Spence TN, Walter EB, Saunders KO, Edwards RJ, Baric RS, Haynes BF, Cain DW, Sheahan TP, Wrapp D

To Be Published

EMD-70441
Download Map
3D View
HCoV-229E S2P bound by two DH1533 Fabs
Release date: Dec. 3, 2025
Resolution: 3.16 Å
EM Method: Single-particle
Fitted PDBs: 9ofp
Q-score: 0.474

Liccione MF, Scobey T, Froggatt HM, Pajon C, Yount BL, Yin Q, Spence TN, Walter EB, Saunders KO, Edwards RJ, Baric RS, Haynes BF, Cain DW, Sheahan TP, Wrapp D

To Be Published

EMD-70442
Composite map
Download Map
3D View
HCoV-229E S2P bound by one DH1533 Fab
Release date: Dec. 3, 2025
Resolution: 2.88 Å
EM Method: Single-particle
Fitted PDBs: 9ofq
Q-score: 0.537

Liccione MF, Scobey T, Froggatt HM, Pajon C, Yount BL, Yin Q, Spence TN, Walter EB, Saunders KO, Edwards RJ, Baric RS, Haynes BF, Cain DW, Sheahan TP, Wrapp D

To Be Published

EMD-37462
Composite map
Download Map
3D View
CryoEM structure of the spike protein of human CoV 229E in complex with receptor hAPN composite map
Release date: March 5, 2025
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8wde
Q-score: 0.435

Tsai YX, Chien YC, Hsu MF, Khoo KH, Hsu SD

Nat Commun (2025) 16 pp. 2045-2045 [ Pubmed: 40016196 DOI: doi:10.1038/s41467-025-57359-8 ]

EMD-38816
Download Map
3D View
Local refinement of receptor binding domain and hinge region of single S protein
Release date: March 5, 2025
Resolution: 3.23 Å
EM Method: Single-particle

Tsai YX, Chien YC, Hsu MF, Khoo KH, Hsu SD

Nat Commun (2025) 16 pp. 2045-2045 [ Pubmed: 40016196 DOI: doi:10.1038/s41467-025-57359-8 ]

EMD-38817
Download Map
3D View
Local refinement of monomeric hAPN
Release date: March 5, 2025
Resolution: 3.73 Å
EM Method: Single-particle

Tsai YX, Chien YC, Hsu MF, Khoo KH, Hsu SD

Nat Commun (2025) 16 pp. 2045-2045 [ Pubmed: 40016196 DOI: doi:10.1038/s41467-025-57359-8 ]

EMD-38818
Download Map
3D View
Local refinement of dimeric hAPN and the receptor binding domain as well as the hinge region of single S protein
Release date: March 5, 2025
Resolution: 3.61 Å
EM Method: Single-particle

Tsai YX, Chien YC, Hsu MF, Khoo KH, Hsu SD

Nat Commun (2025) 16 pp. 2045-2045 [ Pubmed: 40016196 DOI: doi:10.1038/s41467-025-57359-8 ]

EMD-38819
Download Map
3D View
Local refinement of monomeric hAPN and receptor binding domain of single S protein
Release date: March 5, 2025
Resolution: 3.57 Å
EM Method: Single-particle

Tsai YX, Chien YC, Hsu MF, Khoo KH, Hsu SD

Nat Commun (2025) 16 pp. 2045-2045 [ Pubmed: 40016196 DOI: doi:10.1038/s41467-025-57359-8 ]

EMD-38820
Download Map
3D View
Local refinement of single HCoV-229E S protein
Release date: March 5, 2025
Resolution: 3.39 Å
EM Method: Single-particle

Tsai YX, Chien YC, Hsu MF, Khoo KH, Hsu SD

Nat Commun (2025) 16 pp. 2045-2045 [ Pubmed: 40016196 DOI: doi:10.1038/s41467-025-57359-8 ]

EMD-38821
Download Map
3D View
Local refinement of monomeric hAPN and single HCoV-229E S protein
Release date: March 5, 2025
Resolution: 3.71 Å
EM Method: Single-particle

Tsai YX, Chien YC, Hsu MF, Khoo KH, Hsu SD

Nat Commun (2025) 16 pp. 2045-2045 [ Pubmed: 40016196 DOI: doi:10.1038/s41467-025-57359-8 ]

Sort by: Download
Showing 1 - 10 of 16. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [16]

Current status

  • REL [16]

Sample type

  • Complex [16]
  • Protein [8]
  • Ligand [7]
  • RNA [1]

Organism

  • Human coronavirus 229e [16]
  • Homo sapiens [5]
  • Severe acute respiratory syndrome coronavirus [1]

EM Method

  • Single-particle [16]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [12]
  • ≥ 4Å and < 5Å [1]
  • ≥ 6Å and < 8Å [1]

Model molecular weight

  • 100-250 kDa [1]
  • 250-500 kDa [5]
  • 500-1000 kDa [2]

Release Date

  • 2025 [11]
  • 2023 [1]
  • 2021 [1]
  • 2020 [2]
  • 2019 [1]

Author by name

  • Chien YC [8]
  • Hsu MF [8]
  • Hsu SD [8]
  • Hsu STD [8]
  • Khoo KH [8]
  • Tsai YX [8]
  • Baric RS [3]
  • Cain DW [3]
  • Edwards RJ [3]
  • Froggatt HM [3]
  • Haynes BF [3]
  • Liccione MF [3]
  • Pajon C [3]
  • Saunders KO [3]
  • Scobey T [3]
  • Sheahan TP [3]
  • Spence TN [3]
  • Walter EB [3]
  • Wrapp D [3]
  • Yin Q [3]
  • Yount BL [3]
  • Chen Y [2]
  • Cheng C [2]
  • Ding W [2]
  • Fu ZF [2]
  • Huang X [2]
  • Liu ZJ [2]
  • Niu T [2]
  • Peng G [2]
  • Shi J [2]
  • Shi Y [2]
  • Song X [2]
  • Sun L [2]
  • Tan Y [2]
  • Xiao S [2]
  • Xiong Q [2]
  • Zhu Y [2]
  • Benlekbir S [1]
  • Cao Y [1]
  • Chiu W [1]
  • Das R [1]
  • Desforges M [1]
  • Du S [1]
  • Huang R [1]
  • Huang W [1]
  • Kretsch RC [1]
  • Li S [1]
  • Li Z [1]
  • Liu P [1]
  • Nye G [1]
  • Rini JM [1]
  • Rubinstein JL [1]
  • Talbot PJ [1]
  • Tomlinson ACA [1]
  • Wang Y [1]
  • Wong AHM [1]
  • Xiao J [1]
  • Xiao T [1]
  • Xie XS [1]
  • Xu L [1]
  • Yasimayi A [1]
  • Zhang K [1]
  • Zhang Z [1]
  • Zhang ZY [1]
  • Zheludev IN [1]
  • Zhou D [1]
  • Zhou X [1]

Author by ORCID

  • Chien YC [8]
  • Tsai YX [8]
  • Hsu SD [8]
  • Khoo KH [8]
  • Wrapp D [3]
  • Fu ZF [2]
  • Liu ZJ [2]
  • Chen Y [2]
  • Peng G [2]
  • Huang X [2]
  • Song X [2]
  • Zhu Y [2]
  • Xiao S [2]
  • Sun L [2]
  • Ding W [2]
  • Cao Y [1]
  • Das R [1]
  • Xie XS [1]
  • Li Z [1]
  • Wong AHM [1]
  • Wang Y [1]
  • Zhou X [1]
  • Rini JM [1]
  • Xu L [1]
  • Huang W [1]
  • Zhang Z [1]
  • Kretsch RC [1]
  • Li S [1]
  • Chiu W [1]
  • Zheludev IN [1]
  • Tomlinson ACA [1]
  • Zhang K [1]
  • Rubinstein JL [1]
  • Du S [1]
  • Xiao J [1]
  • Nye G [1]
  • Huang R [1]

Journal

  • NAT COMMUN [10]
  • TO BE PUBLISHED [3]
  • BIORXIV [1]
  • CELL RES [1]
  • ELIFE [1]

Software

  • CRYOSPARC [15]

Microscope

  • FEI TITAN KRIOS [12]
  • TFS KRIOS [4]

Electron Source

  • FIELD EMISSION GUN [16]

Film or detector model

  • GATAN K3 6K X 4K [8]
  • GATAN K3 BIOQUANTUM 6K X 4K [4]
  • GATAN K2 SUMMIT 4K X 4K [2]
  • FEI FALCON III 4K X 4K [1]
  • FEI FALCON IV 4K X 4K [1]

External links

  • Gene Ontology [8]
  • PDB [8]
  • PDBe-Kb [8]
  • Pfam [8]
  • UniProt [8]
  • ChEBI [7]
  • ChEMBL [7]
  • AlphaFold DB [5]
  • InterPro [5]
  • Complex Portal [1]