Edit your search query here and hit Return to execute it:
molecular_replacement_software:PHASER

Filter By

Current Database

  • EMDB [10]

Current status

  • REL [10]

Sample type

  • Protein [10]
  • Complex [9]
  • Ligand [7]
  • Cellular component [1]

Organism

  • Homo sapiens [7]
  • Parengyodontium album [3]

EM Method

  • Electron Crystallography [10]

Resolution

  • < 2Å [5]
  • ≥ 2Å and < 3Å [2]

Model molecular weight

  • 0-50 kDa [8]
  • 50-100 kDa [1]

Release Date

  • 2025 [3]
  • 2021 [1]
  • 2018 [3]
  • 2016 [3]

Author by name

  • Gonen T [10]
  • Cascio D [6]
  • Sawaya MR [6]
  • Eisenberg DS [5]
  • Hattne J [5]
  • Rodriguez JA [4]
  • Shi D [4]
  • Clabbers MTB [3]
  • Glabe CG [3]
  • Jiang L [3]
  • Krotee P [3]
  • Martynoqycz MW [3]
  • Nannenga BL [3]
  • Philipp S [3]
  • Reyes FE [3]
  • Boyer DR [2]
  • Griner S [2]
  • Krotee PAL [2]
  • Martynowycz MW [2]
  • Murray K [2]
  • Oskarsson ME [2]
  • Seidler P [2]
  • Westermark GT [2]
  • Calero G [1]
  • Cherezov V [1]
  • Eisenberg D [1]
  • Ge P [1]
  • Ge X [1]
  • Griner SL [1]
  • Guenther EL [1]
  • Hinck AP [1]
  • Hinck CS [1]
  • Kim SK [1]
  • Lee J [1]
  • Rodriguez J [1]
  • Saelices L [1]
  • Seidler PM [1]
  • Shiriaeva A [1]
  • Trinh H [1]
  • Weiss SC [1]
  • Zhou ZH [1]
  • De La Cruz Mj [1]

Author by ORCID

  • Sawaya MR [6]
  • Hattne J [4]
  • Nannenga BL [3]
  • Gonen T [3]
  • Cascio D [2]
  • Griner S [2]
  • Clabbers MTB [2]
  • Krotee P [2]
  • Eisenberg DS [2]
  • Seidler PM [1]
  • Saelices L [1]
  • Ge P [1]
  • Shiriaeva A [1]
  • Griner SL [1]
  • Cherezov V [1]
  • De La Cruz Mj [1]
  • Trinh H [1]
  • Martynowycz MW [1]

Journal

  • ELIFE [2]
  • STRUCT DYN. [2]
  • BIORXIV [1]
  • J BIOL CHEM [1]
  • NAT CHEM [1]
  • NAT COMMUN [1]
  • NAT METHODS [1]
  • NAT STRUCT MOL BIOL [1]
  • PNAS [1]

Software

  • PHASER [10]
  • XSCALE [6]
  • XDS [4]
  • PHENIX [3]
  • AIMLESS [1]
  • DIALS [1]
  • PHENIX.REFINE [1]
  • POINTLESS [1]

Microscope

  • FEI TECNAI 20 [4]
  • TFS KRIOS [3]
  • FEI TECNAI F20 [2]
  • FEI TITAN KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [10]

Film or detector model

  • TVIPS TEMCAM-F416 4K X 4K [6]
  • FEI FALCON IV 4K X 4K [3]
  • FEI CETA 4K X 4K [1]

External links

  • AlphaFold DB [9]
  • PDB [9]
  • UniProt [9]
  • PDBe-Kb [8]
  • ChEBI [6]
  • ChEMBL [6]
  • DrugBank [6]
  • Gene Ontology [4]
  • InterPro [4]
  • Complex Portal [2]
  • Pfam [2]
  • CATH [1]
Sort by: Download
Showing 1 - 10 of 10. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download
EMD-70378
Download Map
3D View
MicroED structure of proteinase K without energy filtering
CryoEM
Release date: May 28, 2025
Resolution: 1.3 Å
EM Method: Electron Crystallography
Fitted PDBs: 9odv
Q-score: 0.763

Clabbers MTB, Gonen T

Struct Dyn. (2025) 12 pp. 034702-034702 [ DOI: doi:10.1063/4.0000755 Pubmed: 40370641 ]

EMD-70379
Download Map
3D View
MicroED structure of proteinase K with energy filtering
CryoEM
Release date: May 28, 2025
Resolution: 1.3 Å
EM Method: Electron Crystallography
Fitted PDBs: 9odw
Q-score: 0.767

Clabbers MTB, Gonen T

Struct Dyn. (2025) 12 pp. 034702-034702 [ DOI: doi:10.1063/4.0000755 Pubmed: 40370641 ]

EMD-46871
Download Map
3D View
Structure of proteinase K from energy-filtered MicroED data
CryoEM
Release date: March 19, 2025
Resolution: 1.09 Å
EM Method: Electron Crystallography
Fitted PDBs: 9dho

Clabbers MTB, Hattne J, Martynowycz MW, Gonen T

Nat Commun (2025) 16 pp. 2247-2247 [ DOI: doi:10.1038/s41467-025-57425-1 Pubmed: 40050283 ]

EMD-24551
Download Map
3D View
MicroED structure of the human adenosine receptor at 2.8A
CryoEM
Release date: Sept. 8, 2021
Resolution: 2.79 Å
EM Method: Electron Crystallography
Fitted PDBs: 7rm5
Q-score: 0.582

Martynowycz MW, Shiriaeva A, Ge X, Hattne J, Nannenga BL, Cherezov V, Gonen T

PNAS (2021) 118 [ DOI: doi:10.1073/pnas.2106041118 Pubmed: 34462357 ]

EMD-8765
Download Map
3D View
MicroED structure of the segment, DLIIKGISVHI, from the RRM2 of TDP-43, residues 247-257
CryoEM
Release date: Feb. 21, 2018
EM Method: Electron Crystallography
Fitted PDBs: 5w52

Guenther EL, Ge P, Trinh H, Sawaya MR, Cascio D, Boyer DR, Gonen T, Zhou ZH, Eisenberg DS

Nat Struct Mol Biol (2018) 25 pp. 311-319 [ Pubmed: 29531287 DOI: doi:10.1038/s41594-018-0045-5 ]

EMD-8635
Download Map
3D View
VQIINK, Structure of the amyloid-spine from microtubule associated protein tau Repeat 2
CryoEM
Release date: Feb. 7, 2018
EM Method: Electron Crystallography
Fitted PDBs: 5v5c

Seidler PM, Boyer DR, Rodriguez JA, Sawaya MR, Cascio D, Murray K, Gonen T, Eisenberg DS

Nat Chem (2018) 10 pp. 170-176 [ DOI: doi:10.1038/nchem.2889 Pubmed: 29359764 ]

EMD-8720
Download Map
3D View
VGSNKGAIIGL from Amyloid Beta determined by MicroED
CryoEM
Release date: Jan. 3, 2018
EM Method: Electron Crystallography
Fitted PDBs: 5vos

Krotee P, Griner SL, Sawaya MR, Cascio D, Rodriguez JA, Shi D, Philipp S, Murray K, Saelices L, Lee J, Seidler P, Glabe CG, Jiang L, Gonen T, Eisenberg DS

J Biol Chem (2018) 293 pp. 2888-2902 [ Pubmed: 29282295 DOI: doi:10.1074/jbc.M117.806109 ]

EMD-8272
Download Map
3D View
Human Islet Amyloid Polypeptide Segment 19-SGNNFGAILSS-29 with Early Onset S20G Mutation Determined by MicroED
CryoEM
Release date: Dec. 21, 2016
Resolution: 1.9 Å
EM Method: Electron Crystallography
Fitted PDBs: 5knz
Q-score: 0.801

Krotee P, Rodriguez JA, Sawaya MR, Cascio D, Reyes FE, Shi D, Hattne J, Nannenga BL, Oskarsson ME, Philipp S, Griner S, Jiang L, Glabe CG, Westermark GT, Gonen T, Eisenberg DS

eLife (2017) 6 [ Pubmed: 28045370 DOI: doi:10.7554/eLife.19273 ]

EMD-8273
Download Map
3D View
Human Islet Amyloid Polypeptide Segment 15-FLVHSSNNFGA-25 Determined by MicroED
CryoEM
Release date: Dec. 21, 2016
Resolution: 1.4 Å
EM Method: Electron Crystallography
Fitted PDBs: 5ko0
Q-score: 0.377

Krotee P, Rodriguez JA, Sawaya MR, Cascio D, Reyes FE, Shi D, Hattne J, Nannenga BL, Oskarsson ME, Philipp S, Griner S, Jiang L, Glabe CG, Westermark GT, Gonen T, Eisenberg DS

eLife (2017) 6 [ Pubmed: 28045370 DOI: doi:10.7554/eLife.19273 ]

EMD-8472
Download Map
3D View
MicroED structure of a complex between monomeric TGF-b and its receptor, TbRII, at 2.9 A resolution
CryoEM
Release date: June 22, 2016
Resolution: 2.9 Å
EM Method: Electron Crystallography
Fitted PDBs: 5ty4
Q-score: 0.587

de la Cruz MJ, Hattne J, Shi D, Seidler P, Rodriguez J, Reyes FE, Sawaya MR, Cascio D, Weiss SC, Kim SK, Hinck CS, Hinck AP, Calero G, Eisenberg D, Gonen T

Nat Methods (2017) 14 pp. 399-402 [ DOI: doi:10.1038/nmeth.4178 Pubmed: 28192420 ]

Sort by: Download
Showing 1 - 10 of 10. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [10]

Current status

  • REL [10]

Sample type

  • Protein [10]
  • Complex [9]
  • Ligand [7]
  • Cellular component [1]

Organism

  • Homo sapiens [7]
  • Parengyodontium album [3]

EM Method

  • Electron Crystallography [10]

Resolution

  • < 2Å [5]
  • ≥ 2Å and < 3Å [2]

Model molecular weight

  • 0-50 kDa [8]
  • 50-100 kDa [1]

Release Date

  • 2025 [3]
  • 2021 [1]
  • 2018 [3]
  • 2016 [3]

Author by name

  • Gonen T [10]
  • Cascio D [6]
  • Sawaya MR [6]
  • Eisenberg DS [5]
  • Hattne J [5]
  • Rodriguez JA [4]
  • Shi D [4]
  • Clabbers MTB [3]
  • Glabe CG [3]
  • Jiang L [3]
  • Krotee P [3]
  • Martynoqycz MW [3]
  • Nannenga BL [3]
  • Philipp S [3]
  • Reyes FE [3]
  • Boyer DR [2]
  • Griner S [2]
  • Krotee PAL [2]
  • Martynowycz MW [2]
  • Murray K [2]
  • Oskarsson ME [2]
  • Seidler P [2]
  • Westermark GT [2]
  • Calero G [1]
  • Cherezov V [1]
  • Eisenberg D [1]
  • Ge P [1]
  • Ge X [1]
  • Griner SL [1]
  • Guenther EL [1]
  • Hinck AP [1]
  • Hinck CS [1]
  • Kim SK [1]
  • Lee J [1]
  • Rodriguez J [1]
  • Saelices L [1]
  • Seidler PM [1]
  • Shiriaeva A [1]
  • Trinh H [1]
  • Weiss SC [1]
  • Zhou ZH [1]
  • De La Cruz Mj [1]

Author by ORCID

  • Sawaya MR [6]
  • Hattne J [4]
  • Nannenga BL [3]
  • Gonen T [3]
  • Cascio D [2]
  • Griner S [2]
  • Clabbers MTB [2]
  • Krotee P [2]
  • Eisenberg DS [2]
  • Seidler PM [1]
  • Saelices L [1]
  • Ge P [1]
  • Shiriaeva A [1]
  • Griner SL [1]
  • Cherezov V [1]
  • De La Cruz Mj [1]
  • Trinh H [1]
  • Martynowycz MW [1]

Journal

  • ELIFE [2]
  • STRUCT DYN. [2]
  • BIORXIV [1]
  • J BIOL CHEM [1]
  • NAT CHEM [1]
  • NAT COMMUN [1]
  • NAT METHODS [1]
  • NAT STRUCT MOL BIOL [1]
  • PNAS [1]

Software

  • PHASER [10]
  • XSCALE [6]
  • XDS [4]
  • PHENIX [3]
  • AIMLESS [1]
  • DIALS [1]
  • PHENIX.REFINE [1]
  • POINTLESS [1]

Microscope

  • FEI TECNAI 20 [4]
  • TFS KRIOS [3]
  • FEI TECNAI F20 [2]
  • FEI TITAN KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [10]

Film or detector model

  • TVIPS TEMCAM-F416 4K X 4K [6]
  • FEI FALCON IV 4K X 4K [3]
  • FEI CETA 4K X 4K [1]

External links

  • AlphaFold DB [9]
  • PDB [9]
  • UniProt [9]
  • PDBe-Kb [8]
  • ChEBI [6]
  • ChEMBL [6]
  • DrugBank [6]
  • Gene Ontology [4]
  • InterPro [4]
  • Complex Portal [2]
  • Pfam [2]
  • CATH [1]