Electron Microscopy Data Bank

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Current Database

Current status

Sample type

Organism

Homo sapiens [132]
Escherichia coli [72]
Synthetic construct [37]
Geobacillus stearothermophilus [21]
Saccharomyces cerevisiae [20]
Thermotoga maritima [18]
Mus musculus [16]
Acetivibrio thermocellus [14]
Severe acute respiratory syndrome coronavirus [12]
Arabidopsis thaliana [12]
Enterobacteria phage t4 [9]
Azotobacter vinelandii [8]
Saccharomyces cerevisiae [8]
Lama glama [8]
Bos taurus [8]
Entamoeba histolytica [6]
Morbillivirus hominis [6]
Drosophila melanogaster [6]
Adeno-associated dependoparvovirus a [5]
Rabies lyssavirus [5]
Paracoccus denitrificans [5]
Mycolicibacterium phage mycofy1 [5]
Salmonella enterica [5]
Jhaorihella thermophila [4]
Escherichia coli [4]
Streptomyces phage phic31 [3]
Measles morbillivirus [3]
Human immunodeficiency virus 1 [3]
(no species) [3]
Methanosarcina mazei [3]
Prevotella buccae [3]
Plasmodium falciparum [3]
Legionella pneumophila [3]
Betainfluenzavirus influenzae [3]
Escherichia coli [3]
Betainfluenzavirus influenzae [2]
Streptococcus thermophilus [2]
Staphylococcus aureus [2]
Influenza b virus [2]
Synthetic rna [2]
Pseudomonas protegens [2]
Methanosarcina thermophila [2]
Geobacter sulfurreducens [2]
Sarbecovirus sp. rhgb07 [2]
(no species) [2]
Escherichia phage fcwl1 [2]
Vibrio cholerae [2]
Geobacter sulfurreducens [2]
(no species) [2]
Yersinia enterocolitica [2]
Triticum monococcum [2]
Puccinia graminis [2]
Platynereis dumerilii [2]
Vibrio alginolyticus [2]
Morbillivirus hominis [2]
Coxiella burnetii [2]
Mycobacterium tuberculosis [2]
Rattus norvegicus [1]
Human herpesvirus 1 [1]
Dengue virus [1]
Influenza b virus [1]
Francisella tularensis [1]
Enterovirus c [1]
Betacoronavirus gravedinis [1]
Clostridium perfringens [1]
Rabbit hemorrhagic disease virus [1]
Haloarcula taiwanensis [1]
Shigella flexneri [1]
Candidatus saccharibacteria bacterium [1]
Chaetomium thermophilum [1]
Escherichia coli [1]
Sulfolobus acidocaldarius [1]
(no species) [1]
Francisella tularensis [1]
Chlorella ohadii [1]
Streptomyces phage phic31 [1]
Geobacillus stearothermophilus [1]
Dna molecule [1]
Enquatrovirus n4 [1]
Nipah virus [1]
Vicugna pacos [1]
Tetrahymena thermophila [1]
Betacoronavirus 1 [1]
Marchantia polymorpha [1]
Babesia divergens [1]
Riemerella anatipestifer [1]
Lablab purpureus [1]
Svunavirus gbsv1 [1]
Maackia amurensis [1]
Actinia fragacea [1]
Pomacea canaliculata [1]
Anthoceros agrestis [1]
Enterovirus d [1]
Enterovirus b [1]
Komagataella pastoris [1]
(no species) [1]
Klebsiella pneumoniae [1]
Saccharomyces cerevisiae [1]
Rhizophagus irregularis [1]
Salmonella enterica [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Andersson ER [25]
Fontana C [25]
Friebe Sandoz S [25]
Galindo Riera N [25]
Karlsson H [25]
Kosek D [25]
Petzold K [25]
Riad M [25]
Schlagnitweit J [25]
Steiner E [25]
Steinmetzger C [25]
Degenhardt MFS [21]
Hou J [21]
Li Y [21]
Stagno J [21]
Wang YX [21]
Akif Tezcan F [19]
Cook BD [19]
Erramilli SK [19]
Herzik Jr Ma [19]
Herzik MA [19]
Kossiakoff AA [19]
Mcguire KL [19]
Narehood SM [19]
Tezcan FA [19]
Li T [18]
Nosol K [18]
Perozo E [18]
Pietrzak-lichwa K [18]
Schmandt N [18]
Tokarz P [18]
Zhao M [18]
Burger J [16]
Dabrowski M [16]
Diebolder CA [16]
Fluegel T [16]
Flugel T [16]
Guillen Schlippe Yv [16]
Mielke T [16]
Schacherl M [16]
Schroeer B [16]
Spahn CMT [16]
Sprink T [16]
Unbehaun A [16]
Li L [15]
Liu B [15]
Lu G [15]
Czarnocki-cieciura M [14]
Nirwal S [14]
Nowotny M [14]
Park J [14]
Skowronek K [14]
Szczepanowski RH [14]
Zajko W [14]
Bourguet M [13]
Dessus AN [13]
Ohashi Y [13]
Rouse SL [13]
Spokaite S [13]
Wang Y [13]
Williams RL [13]
Lin J [12]
Zhang Z [12]
Carroni M [11]
Chen H [11]
Cretu C [11]
Moser T [11]
Pardon E [11]
Pena V [11]
Preobraschenski J [11]
Saphire EO [11]
Steyaert J [11]
Zyla D [11]
Asher WB [10]
Clarke OB [10]
Conigrave AD [10]
Eng E [10]
Fan QR [10]
Frangaj A [10]
Grassucci R [10]
Grasucci R [10]
Hendrickson WA [10]
Hu G [10]
Hu GB [10]
Javitch JA [10]
Li X [10]
Lin X [10]
Lu Z [10]
Manning JJ [10]
Mendez J [10]
Wang L [10]
Ye J [10]
Zuo H [10]
Adelroth P [9]
Appelgren S [9]
Chalk R [9]
Fang Q [9]
Harkins S [9]
Kahle M [9]
Konig F [9]

Author by ORCID

Wang YX [21]
Stagno J [21]
Degenhardt MFS [21]
Zhao M [18]
Perozo E [18]
Erramilli SK [18]
Nosol K [18]
Kossiakoff AA [18]
Li T [18]
Hou J [18]
Pietrzak-lichwa K [18]
Diebolder CA [16]
Mielke T [16]
Guillen Schlippe Yv [16]
Spahn CMT [16]
Schacherl M [16]
Dabrowski M [16]
Flugel T [16]
Czarnocki-cieciura M [14]
Nowotny M [14]
Zajko W [14]
Skowronek K [14]
Nirwal S [14]
Williams RL [13]
Spokaite S [13]
Ohashi Y [13]
Bourguet M [13]
Dessus AN [13]
Moser T [11]
Preobraschenski J [11]
Cretu C [11]
Pena V [11]
Carroni M [11]
Javitch JA [10]
Asher WB [10]
Pardon E [10]
Mendez J [10]
Steyaert J [10]
Lu Z [10]
Frangaj A [10]
Manning JJ [10]
Conigrave AD [10]
Eng E [10]
Zuo H [10]
Fan QR [10]
Hendrickson WA [10]
Hu GB [10]
Ye J [10]
Kahle M [9]
Liu B [9]
Wendler P [9]
Adelroth P [9]
Appelgren S [9]
Pusapati GV [8]
Rivero-gamez A [8]
Kong JH [8]
Lyumkis D [8]
Horton NC [8]
Gagnon MG [8]
Shan Z [8]
Lin J [7]
Nguyen HTV [7]
Rybak MY [7]
Zhu Y [7]
Li L [7]
Ma C [7]
Kaushal PS [6]
Pape C [6]
Huang KA [6]
Zyla D [6]
Wichmann C [6]
Leidner F [6]
Kim TH [6]
Esch K [6]
Ruan Z [6]
Grubmuller H [6]
Lin TY [6]
Brose N [6]
Strenzke N [6]
Chen H [6]
Trebilcock A [6]
Mutschall S [6]
Benseler F [6]
Hsu PH [6]
Evdokimova N [6]
Horne JE [5]
Temiakov D [5]
Itoh Y [5]
Shih HA [5]
Zhou Y [5]
Nayak AR [5]
Horne RJ [5]
Schaberle TF [5]
Chang YC [5]
Wu KP [5]
Chen T [5]
Radford SE [5]
Ranson NA [5]
Wang YS [5]
Taguchi H [5]

Journal

NAT COMMUN [129]
BIORXIV [63]
TO BE PUBLISHED [63]
PNAS [36]
NAT STRUCT MOL BIOL [14]
MOL CELL [13]
NATURE [13]
J MOL BIOL [12]
SCI ADV [11]
STRUCTURE [10]
CELL REP [9]
ELIFE [9]
CELL RES [8]
COMMUN BIOL [6]
EMBO J [5]
J BIOL CHEM [5]
ACTA CRYSTALLOGR D STRUCT BIOL [4]
CELL HOST MICROBE [4]
NUCLEIC ACIDS RES [4]
PLOS PATHOG [4]
SCIENCE [3]
J CELL BIOL [2]
J MED CHEM [2]
NAT PLANTS [2]
NAT PROTOC [2]
PROTEIN CELL [2]
ANGEW CHEM INT ED ENGL [1]
BIOMATER SCI [1]
CHEM.COMMUN.(CAMB.) [1]
CHEMPLUSCHEM [1]
COMMUN CHEM [1]
J VIROL [1]
J.MUSCLE RES.CELL.MOTIL. [1]
MOL PLANT [1]
MOL THER [1]
MOL.BIOL.EVOL. [1]
NPJ VACCINES [1]
PROTEIN SCI [1]
RES SQ [1]
SOIL BIOL.BIOCHEM. [1]

Software

Microscope

Electron Source

Film or detector model

External links

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Showing 1 - 10 of 436. Page 1 of 44

Display:

Statistics

EMD-55897

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3D View

DDK-salt stripped phosphorylated MCM2-7 DH

CryoEM

Release date: Aug. 26, 2026
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9tgd

Q-score: 0.506
Similar entry percentile: 72%

Noguchi Y, Saleh A, Schneider S, Ivanova ME, Chen ZA, Ranjha L, Aramayo R, Tognetti S, Faull SV, Rappsilber J, Speck C

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-76309-6 ]

EMD-55904

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3D View

Cryo-EM structure of MCM2-7 DH bound to Sld3-Sld7 composite map

Composite map

CryoEM

Release date: Aug. 26, 2026
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9tgm

Q-score: 0.477
Similar entry percentile: 74%

Noguchi Y, Saleh A, Schneider S, Ivanova ME, Chen ZA, Ranjha L, Aramayo R, Tognetti S, Faull SV, Rappsilber J, Speck C

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-76309-6 ]

EMD-55918

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3D View

Cryo-EM structure of MCM2-7 DH bound to Sld3-Sld7, Cdc45 and DNA composite map

Composite map

CryoEM

Release date: Aug. 26, 2026
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9th8

Q-score: 0.468
Similar entry percentile: 34%

Noguchi Y, Saleh A, Schneider S, Ivanova ME, Chen ZA, Ranjha L, Aramayo R, Tognetti S, Faull SV, Rappsilber J, Speck C

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-76309-6 ]

EMD-56011

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3D View

Negative stain-EM map of crosslinked gradient purified Sld3-Sld7

Negative staining

Release date: Aug. 26, 2026
Resolution: 17.0 Å
EM Method: Single-particle

Noguchi Y, Saleh A, Schneider S, Ivanova ME, Chen ZA, Ranjha L, Aramayo R, Tognetti S, Faull SV, Rappsilber J, Speck C

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-76309-6 ]

EMD-56012

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3D View

Negative stain-EM map of crosslinked gradient purified Sld3-Sld7-Cdc45

Negative staining

Release date: Aug. 26, 2026
Resolution: 18.0 Å
EM Method: Single-particle

Noguchi Y, Saleh A, Schneider S, Ivanova ME, Chen ZA, Ranjha L, Aramayo R, Tognetti S, Faull SV, Rappsilber J, Speck C

Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-76309-6 ]

EMD-65816

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Cryo-EM structure of helicase DruE in the Druantia anti-phage system elucidates its anti-phage mechanism

CryoEM

Release date: Aug. 26, 2026
Resolution: 3.29 Å
EM Method: Single-particle
Fitted PDBs: 9waf

Q-score: 0.615
Similar entry percentile: 99%

Hou J, He YX, Gui L

To Be Published

EMD-65882

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Cryo-EM Structure of the 11-Mer ATPase Complex YsaN from the Type III Secretion System of Yersinia enterocolitica

CryoEM

Release date: Aug. 26, 2026
Resolution: 3.51 Å
EM Method: Single-particle
Fitted PDBs: 9wd4

Q-score: 0.378
Similar entry percentile: 26%

Bhattacharyya B, Chakraborty B, Datta S, Patra D

To Be Published

EMD-65895

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3D View

Cryo-EM structure of helicase DruE in the Druantia anti-phage system elucidates its anti-phage mechanism

Consensus map

CryoEM

Release date: Aug. 26, 2026
Resolution: 3.64 Å
EM Method: Single-particle

Hou J, He YX, Gui L

To Be Published

EMD-65920

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3D View

Cryo-EM Structure of the 13-Mer ATPase Complex YsaN from the Type III Secretion System of Yersinia enterocolitica

CryoEM

Release date: Aug. 26, 2026
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 9wf0

Q-score: 0.359
Similar entry percentile: 33%

Bhattacharyya B, Chakraborty B, Datta S, Patra D

To Be Published

EMD-75729

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3D View

Mouse monoclonal antibody A2 in complex with rabies virus glycoprotein

CryoEM

Release date: Aug. 19, 2026
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 11iw

Q-score: 0.44
Similar entry percentile: 27%

Callaway HM, Zyla D, Hastie K, Harkins S, Kothalawalage S, Samarasinghe S, Flynn A, Hariharan C, Yin J, Corti D, Bouhry H, Dessain S, Saphire EO

To Be Published

Sort by: Download

Showing 1 - 10 of 436. Page 1 of 44

Display:

Statistics

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [132]
Escherichia coli [72]
Synthetic construct [37]
Geobacillus stearothermophilus [21]
Saccharomyces cerevisiae [20]
Thermotoga maritima [18]
Mus musculus [16]
Acetivibrio thermocellus [14]
Severe acute respiratory syndrome coronavirus [12]
Arabidopsis thaliana [12]
Enterobacteria phage t4 [9]
Azotobacter vinelandii [8]
Saccharomyces cerevisiae [8]
Lama glama [8]
Bos taurus [8]
Entamoeba histolytica [6]
Morbillivirus hominis [6]
Drosophila melanogaster [6]
Adeno-associated dependoparvovirus a [5]
Rabies lyssavirus [5]
Paracoccus denitrificans [5]
Mycolicibacterium phage mycofy1 [5]
Salmonella enterica [5]
Jhaorihella thermophila [4]
Escherichia coli [4]
Streptomyces phage phic31 [3]
Measles morbillivirus [3]
Human immunodeficiency virus 1 [3]
(no species) [3]
Methanosarcina mazei [3]
Prevotella buccae [3]
Plasmodium falciparum [3]
Legionella pneumophila [3]
Betainfluenzavirus influenzae [3]
Escherichia coli [3]
Betainfluenzavirus influenzae [2]
Streptococcus thermophilus [2]
Staphylococcus aureus [2]
Influenza b virus [2]
Synthetic rna [2]
Pseudomonas protegens [2]
Methanosarcina thermophila [2]
Geobacter sulfurreducens [2]
Sarbecovirus sp. rhgb07 [2]
(no species) [2]
Escherichia phage fcwl1 [2]
Vibrio cholerae [2]
Geobacter sulfurreducens [2]
(no species) [2]
Yersinia enterocolitica [2]
Triticum monococcum [2]
Puccinia graminis [2]
Platynereis dumerilii [2]
Vibrio alginolyticus [2]
Morbillivirus hominis [2]
Coxiella burnetii [2]
Mycobacterium tuberculosis [2]
Rattus norvegicus [1]
Human herpesvirus 1 [1]
Dengue virus [1]
Influenza b virus [1]
Francisella tularensis [1]
Enterovirus c [1]
Betacoronavirus gravedinis [1]
Clostridium perfringens [1]
Rabbit hemorrhagic disease virus [1]
Haloarcula taiwanensis [1]
Shigella flexneri [1]
Candidatus saccharibacteria bacterium [1]
Chaetomium thermophilum [1]
Escherichia coli [1]
Sulfolobus acidocaldarius [1]
(no species) [1]
Francisella tularensis [1]
Chlorella ohadii [1]
Streptomyces phage phic31 [1]
Geobacillus stearothermophilus [1]
Dna molecule [1]
Enquatrovirus n4 [1]
Nipah virus [1]
Vicugna pacos [1]
Tetrahymena thermophila [1]
Betacoronavirus 1 [1]
Marchantia polymorpha [1]
Babesia divergens [1]
Riemerella anatipestifer [1]
Lablab purpureus [1]
Svunavirus gbsv1 [1]
Maackia amurensis [1]
Actinia fragacea [1]
Pomacea canaliculata [1]
Anthoceros agrestis [1]
Enterovirus d [1]
Enterovirus b [1]
Komagataella pastoris [1]
(no species) [1]
Klebsiella pneumoniae [1]
Saccharomyces cerevisiae [1]
Rhizophagus irregularis [1]
Salmonella enterica [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Andersson ER [25]
Fontana C [25]
Friebe Sandoz S [25]
Galindo Riera N [25]
Karlsson H [25]
Kosek D [25]
Petzold K [25]
Riad M [25]
Schlagnitweit J [25]
Steiner E [25]
Steinmetzger C [25]
Degenhardt MFS [21]
Hou J [21]
Li Y [21]
Stagno J [21]
Wang YX [21]
Akif Tezcan F [19]
Cook BD [19]
Erramilli SK [19]
Herzik Jr Ma [19]
Herzik MA [19]
Kossiakoff AA [19]
Mcguire KL [19]
Narehood SM [19]
Tezcan FA [19]
Li T [18]
Nosol K [18]
Perozo E [18]
Pietrzak-lichwa K [18]
Schmandt N [18]
Tokarz P [18]
Zhao M [18]
Burger J [16]
Dabrowski M [16]
Diebolder CA [16]
Fluegel T [16]
Flugel T [16]
Guillen Schlippe Yv [16]
Mielke T [16]
Schacherl M [16]
Schroeer B [16]
Spahn CMT [16]
Sprink T [16]
Unbehaun A [16]
Li L [15]
Liu B [15]
Lu G [15]
Czarnocki-cieciura M [14]
Nirwal S [14]
Nowotny M [14]
Park J [14]
Skowronek K [14]
Szczepanowski RH [14]
Zajko W [14]
Bourguet M [13]
Dessus AN [13]
Ohashi Y [13]
Rouse SL [13]
Spokaite S [13]
Wang Y [13]
Williams RL [13]
Lin J [12]
Zhang Z [12]
Carroni M [11]
Chen H [11]
Cretu C [11]
Moser T [11]
Pardon E [11]
Pena V [11]
Preobraschenski J [11]
Saphire EO [11]
Steyaert J [11]
Zyla D [11]
Asher WB [10]
Clarke OB [10]
Conigrave AD [10]
Eng E [10]
Fan QR [10]
Frangaj A [10]
Grassucci R [10]
Grasucci R [10]
Hendrickson WA [10]
Hu G [10]
Hu GB [10]
Javitch JA [10]
Li X [10]
Lin X [10]
Lu Z [10]
Manning JJ [10]
Mendez J [10]
Wang L [10]
Ye J [10]
Zuo H [10]
Adelroth P [9]
Appelgren S [9]
Chalk R [9]
Fang Q [9]
Harkins S [9]
Kahle M [9]
Konig F [9]

Author by ORCID

Wang YX [21]
Stagno J [21]
Degenhardt MFS [21]
Zhao M [18]
Perozo E [18]
Erramilli SK [18]
Nosol K [18]
Kossiakoff AA [18]
Li T [18]
Hou J [18]
Pietrzak-lichwa K [18]
Diebolder CA [16]
Mielke T [16]
Guillen Schlippe Yv [16]
Spahn CMT [16]
Schacherl M [16]
Dabrowski M [16]
Flugel T [16]
Czarnocki-cieciura M [14]
Nowotny M [14]
Zajko W [14]
Skowronek K [14]
Nirwal S [14]
Williams RL [13]
Spokaite S [13]
Ohashi Y [13]
Bourguet M [13]
Dessus AN [13]
Moser T [11]
Preobraschenski J [11]
Cretu C [11]
Pena V [11]
Carroni M [11]
Javitch JA [10]
Asher WB [10]
Pardon E [10]
Mendez J [10]
Steyaert J [10]
Lu Z [10]
Frangaj A [10]
Manning JJ [10]
Conigrave AD [10]
Eng E [10]
Zuo H [10]
Fan QR [10]
Hendrickson WA [10]
Hu GB [10]
Ye J [10]
Kahle M [9]
Liu B [9]
Wendler P [9]
Adelroth P [9]
Appelgren S [9]
Pusapati GV [8]
Rivero-gamez A [8]
Kong JH [8]
Lyumkis D [8]
Horton NC [8]
Gagnon MG [8]
Shan Z [8]
Lin J [7]
Nguyen HTV [7]
Rybak MY [7]
Zhu Y [7]
Li L [7]
Ma C [7]
Kaushal PS [6]
Pape C [6]
Huang KA [6]
Zyla D [6]
Wichmann C [6]
Leidner F [6]
Kim TH [6]
Esch K [6]
Ruan Z [6]
Grubmuller H [6]
Lin TY [6]
Brose N [6]
Strenzke N [6]
Chen H [6]
Trebilcock A [6]
Mutschall S [6]
Benseler F [6]
Hsu PH [6]
Evdokimova N [6]
Horne JE [5]
Temiakov D [5]
Itoh Y [5]
Shih HA [5]
Zhou Y [5]
Nayak AR [5]
Horne RJ [5]
Schaberle TF [5]
Chang YC [5]
Wu KP [5]
Chen T [5]
Radford SE [5]
Ranson NA [5]
Wang YS [5]
Taguchi H [5]

Journal

NAT COMMUN [129]
BIORXIV [63]
TO BE PUBLISHED [63]
PNAS [36]
NAT STRUCT MOL BIOL [14]
MOL CELL [13]
NATURE [13]
J MOL BIOL [12]
SCI ADV [11]
STRUCTURE [10]
CELL REP [9]
ELIFE [9]
CELL RES [8]
COMMUN BIOL [6]
EMBO J [5]
J BIOL CHEM [5]
ACTA CRYSTALLOGR D STRUCT BIOL [4]
CELL HOST MICROBE [4]
NUCLEIC ACIDS RES [4]
PLOS PATHOG [4]
SCIENCE [3]
J CELL BIOL [2]
J MED CHEM [2]
NAT PLANTS [2]
NAT PROTOC [2]
PROTEIN CELL [2]
ANGEW CHEM INT ED ENGL [1]
BIOMATER SCI [1]
CHEM.COMMUN.(CAMB.) [1]
CHEMPLUSCHEM [1]
COMMUN CHEM [1]
J VIROL [1]
J.MUSCLE RES.CELL.MOTIL. [1]
MOL PLANT [1]
MOL THER [1]
MOL.BIOL.EVOL. [1]
NPJ VACCINES [1]
PROTEIN SCI [1]
RES SQ [1]
SOIL BIOL.BIOCHEM. [1]

Software

Microscope

Electron Source

Film or detector model

External links