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Filter By
Current Database
- EMDB [669]
Current status
- REL [669]
Sample type
- Sample [276]
- Virus [168]
- Cellular component [161]
- Cell [153]
- Complex [107]
- Protein [102]
- Tissue [35]
- Ligand [5]
- RNA [5]
- Other [1]
Organism
- Homo sapiens [109]
- Chlamydomonas reinhardtii [75]
- Mus musculus [58]
- Saccharomyces cerevisiae [21]
- Rattus norvegicus [19]
- Danio rerio [19]
- Escherichia coli [18]
- Sus scrofa [12]
- Saccharomyces cerevisiae [11]
- Human immunodeficiency virus 1 [10]
- Human herpesvirus 1 [9]
- Enterovirus c [9]
- Physcomitrium patens [9]
- Drosophila melanogaster [9]
- Vibrio cholerae [8]
- Bos taurus [8]
- Suid alphaherpesvirus 1 [7]
- Oryctolagus cuniculus [7]
- Mycobacterium phage bxb1 [6]
- Chikungunya virus [6]
- Enterobacteria phage hk97 [6]
- Yersinia entomophaga [6]
- Feline calicivirus [5]
- Enterovirus b [5]
- Synthetic construct [5]
- Haloarcula hispanica virus sh1 [5]
- Trypanosoma brucei [5]
- Felis catus [5]
- Pseudoalteromonas phage pm2 [4]
- Salmonella phage p22 [4]
- Phage gifsy-2 [4]
- Bacillus thuringiensis [4]
- Escherichia coli [4]
- Enterobacteria phage t4 [4]
- Severe acute respiratory syndrome coronavirus [4]
- Human mastadenovirus c [4]
- (no species) [4]
- Megathura crenulata [4]
- Plasmodium falciparum [4]
- Caenorhabditis elegans [4]
- (no species) [3]
- Cavia porcellus [3]
- Unidentified adenovirus [3]
- Pseudomonas phage phi6 [3]
- West nile virus [3]
- Influenza a virus [3]
- Parechovirus a [3]
- Chaetomium thermophilum [3]
- Deinococcus radiodurans [3]
- Thermus thermophilus [3]
- Bunyamwera orthobunyavirus [3]
- Shigella flexneri [3]
- Chlorocebus aethiops [3]
- Human herpesvirus 3 [2]
- Hepatitis b virus [2]
- Canine mastadenovirus a [2]
- Human papillomavirus [2]
- Pseudomonas virus prd1 [2]
- Semliki forest virus [2]
- Hepacivirus c [2]
- Vesicular stomatitis virus [2]
- Synechocystis sp. pcc 6803 [2]
- Equine infectious anemia virus [2]
- Mason-pfizer monkey virus [2]
- Litorilinea aerophila [2]
- Hiv-1 vector pnl4-3 [2]
- Human respiratory syncytial virus [2]
- Yersinia phage phir1-37 [2]
- Enterovirus b [2]
- Plasmodium falciparum [2]
- Toxoplasma gondii [2]
- Influenza a virus [2]
- Enterovirus a [2]
- Magnetospirillum gryphiswaldense [2]
- Schizosaccharomyces pombe [2]
- Enterobacteria phage cus-3 [2]
- Trypanosoma brucei [2]
- Toxoplasma gondii [2]
- Brochothrix phage nf5 [2]
- African horse sickness virus [2]
- Salmonella enterica [2]
- (no species) [1]
- Mus sp. [1]
- Human herpesvirus 1 [1]
- Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [1]
- Epstein-barr virus (strain gd1) [1]
- Simian virus 40 [1]
- Bacillus phage spp1 [1]
- Great island virus [1]
- Rotavirus a [1]
- Avian infectious bursal disease virus [1]
- Sindbis virus [1]
- Venezuelan equine encephalitis virus [1]
- Western equine encephalitis virus [1]
- Candidatus pseudothioglobus singularis [1]
- Synechococcus elongatus [1]
- Alphainfluenzavirus influenzae [1]
- Simian immunodeficiency virus [1]
- Murine leukemia virus [1]
- Avian leukosis virus [1]
EM Method
- Tomography [331]
- Single-particle [163]
- Subtomogram averaging [135]
- Helical reconstruction [35]
- Electron Crystallography [5]
Resolution
- ≥ 2Å and < 3Å [1]
- ≥ 3Å and < 4Å [3]
- ≥ 4Å and < 5Å [3]
- ≥ 5Å and < 6Å [2]
- ≥ 6Å and < 8Å [17]
- ≥ 8Å and < 12Å [73]
- ≥ 12Å and < 16Å [43]
- ≥ 16Å and < 20Å [31]
- ≥ 20Å and < 30Å [57]
- ≥ 30Å [112]
Model molecular weight
- 0-50 kDa [1]
- 50-100 kDa [4]
- 100-250 kDa [7]
- 250-500 kDa [13]
- 500-1000 kDa [2]
- 1-2 MDa [8]
- 2-5 MDa [14]
- 5-10 MDa [11]
- > 10 MDa [9]
Release Date
- 2026 [58]
- 2025 [35]
- 2024 [72]
- 2023 [49]
- 2022 [41]
- 2021 [23]
- 2020 [27]
- 2019 [22]
- 2018 [35]
- 2017 [21]
- 2016 [46]
- 2015 [17]
- 2014 [46]
- 2013 [38]
- 2012 [34]
- 2011 [17]
- 2010 [17]
- 2009 [22]
- 2008 [8]
- 2007 [7]
- 2006 [9]
- 2005 [16]
- 2004 [1]
- 2003 [5]
- 2002 [3]
Author by name
- Kikkawa M [81]
- Oda T [69]
- Yanagisawa H [56]
- Baumeister W [53]
- Butcher SJ [40]
- Conway JF [31]
- Beck F [27]
- Guo Q [27]
- Elbaum M [25]
- Plitzko JM [24]
- Briggs JAG [23]
- Chiu W [21]
- Laurinmaki P [21]
- Qu L [20]
- Tang X [20]
- Yagi T [20]
- Bamford DH [19]
- Abe T [18]
- Fernandez-busnadiego R [18]
- Schulman BA [18]
- Wilfling F [18]
- Yamaguchi H [18]
- Enenkel C [17]
- Ernst OP [17]
- Saibil HR [17]
- Schoehn G [17]
- Chang YW [16]
- Cheng N [16]
- Kirchweger P [16]
- Chang Y-W [15]
- Homa FL [15]
- Poege M [15]
- Steven AC [15]
- Wu W [15]
- Grigorieff N [14]
- Huet A [14]
- Huffman JB [14]
- Huiskonen JT [13]
- Jensen GJ [13]
- Wolf SG [13]
- Effantin G [12]
- Morikawa M [12]
- Pilhofer M [12]
- Plitzko J [12]
- Bhella D [11]
- Dickmanns M [11]
- Fandrich M [11]
- Frommer WB [11]
- Grunewald K [11]
- Klumpe S [11]
- Liu J [11]
- Makhov AM [11]
- Miras M [11]
- Schmid MF [11]
- Schmidt M [11]
- Schur FKM [11]
- Simon R [11]
- Taylor KA [11]
- Xu P [11]
- Annamalai K [10]
- Chretien D [10]
- Guesdon A [10]
- Kamiya R [10]
- Mielke T [10]
- Morado DR [10]
- Schampers R [10]
- Schmidt A [10]
- Seitsonen JJT [10]
- Susi P [10]
- Tang XM [10]
- Varsano N [10]
- Winkler H [10]
- Boer Iwema R [9]
- Close W [9]
- Comet M [9]
- Dijkman PM [9]
- Drulyte I [9]
- Faendrich M [9]
- Franke T [9]
- Grollios F [9]
- Hora M [9]
- Hyypia T [9]
- Jacobs-sera D [9]
- Kivela HM [9]
- Li Z [9]
- Lopez HR [9]
- Masiulis S [9]
- Neumann M [9]
- Ortega DR [9]
- Pryor Jr Ee [9]
- Raschdorf O [9]
- Reif B [9]
- Rettberg LA [9]
- Ruigrok RW [9]
- Schmidt V [9]
- Shakeel S [9]
- Toropova K [9]
- Zhang Y [9]
- Barr ZK [8]
- Belnap DM [8]
Author by ORCID
- Kikkawa M [81]
- Oda T [69]
- Yanagisawa H [54]
- Butcher SJ [38]
- Conway JF [29]
- Baumeister W [21]
- Yagi T [20]
- Briggs JAG [19]
- Laurinmaki P [18]
- Schulman BA [18]
- Wilfling F [18]
- Yamaguchi H [18]
- Chiu W [18]
- Schoehn G [17]
- Elbaum M [16]
- Plitzko JM [16]
- Guo Q [16]
- Chang YW [15]
- Bamford DH [14]
- Fernandez-busnadiego R [14]
- Huiskonen JT [13]
- Grigorieff N [13]
- Pilhofer M [12]
- Effantin G [12]
- Morikawa M [12]
- Grunewald K [11]
- Klumpe S [11]
- Bhella D [11]
- Kirchweger P [10]
- Susi P [10]
- Pryor Jr Ee [9]
- Hora M [9]
- Neumann M [9]
- Toropova K [9]
- Drulyte I [9]
- Raschdorf O [9]
- Shakeel S [9]
- Schampers R [9]
- Frommer WB [8]
- Engel BD [8]
- Simon R [8]
- Clare DK [8]
- Miras M [8]
- Hogle JM [8]
- Rettberg LA [8]
- Barr ZK [8]
- Pittler SJ [8]
- Schmid MF [8]
- Estrozi LF [8]
- Wensel TG [8]
- Dickmanns M [8]
- Egelman EH [8]
- Gory-faure S [7]
- Arnal I [7]
- Prazak V [7]
- Schulze WX [7]
- Kjr A [7]
- Akhmanova A [7]
- Duchesne L [7]
- Bosc C [7]
- Denarier E [7]
- Wolf SG [7]
- Serre L [7]
- Chretien D [7]
- Mitsuoka K [7]
- Gopal D [7]
- Steinmetz MO [7]
- Chipman PR [7]
- Schur FKM [7]
- Wu J [7]
- Huet A [6]
- Beton JG [6]
- Hipp MS [6]
- Weiss GL [6]
- Saibil HR [6]
- Freeman KG [6]
- Mondal S [6]
- Monistrol J [6]
- Ho MC [6]
- Johnston EC [6]
- Takeda H [6]
- Filman DJ [6]
- Yanagisawa HA [6]
- Winkler DC [6]
- Hurst M [5]
- Baker TS [5]
- Sinkovits RS [5]
- Roine E [5]
- Raunser S [5]
- Aksyuk A [5]
- Schoof M [5]
- Strauss M [5]
- Wakabayashi KI [5]
- Feldmuller M [5]
- Sun S [5]
- Koplas A [5]
- Shi Y [5]
- Kukulski W [5]
- Ericson CF [5]
- Khodjakov A [5]
Journal
- PNAS [61]
- TO BE PUBLISHED [55]
- J VIROL [51]
- CELL [49]
- NAT COMMUN [45]
- ELIFE [32]
- MOL BIOL CELL [30]
- BIORXIV [27]
- J STRUCT BIOL [23]
- NAT MICROBIOL [22]
- SCIENCE [20]
- STRUCTURE [19]
- J MOL BIOL [17]
- NAT STRUCT MOL BIOL [15]
- J CELL BIOL [14]
- J CELL SCI [14]
- NATURE [14]
- EMBO J [12]
- SCI ADV [12]
- PLOS PATHOG [11]
- ACTA CRYSTALLOGR D STRUCT BIOL [10]
- VIROLOGY [10]
- NAT CELL BIOL [9]
- EMBO REP [8]
- NAT METHODS [8]
- J BIOL CHEM [7]
- MOL CELL [7]
- NAT PLANTS [7]
- CURR BIOL [6]
- MICROSC MICROANAL [6]
- CYTOSKELETON [5]
- ISCIENCE [5]
- J STRUCT BIOL X [5]
- MBIO [5]
- PLOS BIOL [5]
- BLOOD [4]
- CELL REP [4]
- COMMUN BIOL [4]
- J BACTERIOL [4]
- J MICROSC [4]
- RES SQ [4]
- NUCLEIC ACIDS RES [3]
- PLOS ONE [3]
- J IMMUNOL [2]
- MOL MICROBIOL [2]
- SCI REP [2]
- ADV SCI [1]
- BIOL IMAGING [1]
- BIOPHYS J [1]
- CELL DISCOV [1]
- CELL MICROBIOL [1]
- CELLS [1]
- ENVIRON MICROBIOL [1]
- FEBS LETT [1]
- FRONT CELL NEUROSCI [1]
- FRONT MICROBIOL [1]
- GENES CELLS [1]
- HUM GENE THER [1]
- INT J MOL SCI [1]
- J GEN VIROL [1]
- J VIS EXP [1]
- NAT PROTOC [1]
- OPEN BIOL [1]
- PLOS COMPUT BIOL [1]
- VIRUSES [1]
Software
- IMOD [186]
- AUTO3DEM [31]
- PEET [31]
- IMOD, PEET [28]
- EMAN2 [25]
- SPIDER [24]
- PRIISM/IVE [23]
- TOMO3D [23]
- ETOMO [22]
- CTFFIND [19]
- FREALIX [14]
- PEET, RUBY-HELIX [13]
- PROTOMO [11]
- EM3DR2 [10]
- RELION [9]
- WARP [9]
- CHIMERA [8]
- EMAN [8]
- PFT2, EM3DR2, POR, P3DR [7]
- MATLAB [6]
- CTFPHASEFLIP [5]
- FREALIGN [5]
- MRC [5]
- NOVACTF [5]
- AUTO3DEM V3.13 [4]
- EMBL, P3DR [4]
- EMFIT [4]
- ETOMO, IMOD [4]
- PFT - EM3DR [4]
- PFT2, EM3DR2 [4]
- AMIRAMOL 3.0 [3]
- ETOMO, FROM, IMOD, SOFTWARE [3]
- GCTF [3]
- IPET [3]
- PFT EM3DR [3]
- SPIDER, IHRSR [3]
- TOMOCTF [3]
- 2DX [2]
- AUTO3DEM, CTFFIND3 [2]
- AUTO3DEM, ROBEM, AUTOPP [2]
- EM3DR2, P3DR [2]
- EMBL-ICOS, MRC [2]
- IMAGIC, FREALIGN AND SPIDER [2]
- IMOD, PEET, BSOFT, EMAN2, SPARX [2]
- MDFF [2]
- P3DR [2]
- PFT, POR, EM3DR2, P3DR [2]
- PFT2 AND EM3DR2 [2]
- PFT2 EM3DR2 [2]
- SITUS [2]
- SPIDER, SPARX [2]
- SPIER, IMAGIC, BKRP [2]
- UCSF CHIMERA [2]
- URO [2]
- 2DX_AUTOMATOR, CTFFIND, HELIXBOXER, IHRSR/SPIDER [1]
- ARETOMO [1]
- AUTO [1]
- AUTO3DEM V3.07 [1]
- AUTO3DEM V4.02 [1]
- BSOFT, PFT2, EM3DR2 [1]
- BUSTER-TNT [1]
- CHARMM [1]
- CHIMERA, PYMOL, VMD, NAMD, MDFF, BSOFT [1]
- CHIMERA,SCULPTOR [1]
- CISTEM [1]
- COOT [1]
- CRYOSPARC [1]
- CTFFIND3, EMAN2, AND, AUTO3DEM [1]
- DYNAMO [1]
- EM3DR [1]
- EMAN, BSOFT, PFT2, EM3DR2 [1]
- EMBL [1]
- EMBL-ICOS [1]
- EMFIT CHENG ET AL 1995 [1]
- EMFIT M. ROSSMANN CHENG, R., KUHN, R., OLSON, N., ROSSMANN, M., AND BAKER, T. 1995 . NUCLEOCAPSID AND GLYCOPROTEIN ORGANIZATION IN AN ENVELOPED VIRUS. CELL 80, 621-630. [1]
- EMPFT [1]
- FOCUS [1]
- FOLDHUNTER AND HOMEMADE SOFTWARE [1]
- GAP [1]
- GROMACS [1]
- HAND-MADE, PROGRAMS [1]
- HANDMADE [1]
- IHRSR [1]
- IMAGIC [1]
- IMAGIC SPIDER [1]
- IMAGIC, EMAN, BSOFT [1]
- IMAGIC, EMAN, FREALIGN, SPIDER, GAP [1]
- IMAGIC-5, SPIDER [1]
- IMOD, RAPTOR [1]
- IMOD, TOMO3D [1]
- IMODFIT [1]
- JSPR [1]
- MATLAB, IMAGEV [1]
- MOLREP [1]
- MRC, CCP4, HOMEMADE [1]
- O [1]
- PARALLELIZED EMPFT, EM3DR [1]
- PFT [1]
- PFT EM3DR PFT2 EM3DR2 [1]
- PFT, POR, EM3DR, P3DR [1]
Microscope
- FEI TITAN KRIOS [168]
- TFS KRIOS [95]
- FEI TECNAI F20 [82]
- FEI POLARA 300 [49]
- JEOL 3100FFC [43]
- FEI/PHILIPS CM200FEG [29]
- JEOL 2200FS [21]
- OTHER [18]
- FEI TECNAI 20 [17]
- FEI/PHILIPS CM300FEG/T [16]
- FEI TALOS ARCTICA [14]
- FEI TECNAI 12 [14]
- FEI TECNAI F30 [13]
- FEI/PHILIPS CM200T [12]
- JEOL 2100 [12]
- JEOL 2010F [9]
- TFS GLACIOS [9]
- FEI/PHILIPS CM200FEG/ST [5]
- JEOL 3100FEF [5]
- HITACHI H3000 UHVEM [4]
- FEI/PHILIPS CM120T [3]
- JEOL 1200EXII [3]
- JEOL 2200FSC [3]
- JEOL 3000SFF [3]
- JEOL 3200FSC [3]
- JEOL CRYO ARM 300 [3]
- JEOL 1200 [2]
- JEOL 1400 [2]
- JEOL 2100F [2]
- TFS TALOS [2]
- ZEISS LIBRA120PLUS [2]
- FEI TECNAI SPIRIT [1]
- FEI TITAN [1]
- FEI/PHILIPS CM300FEG/ST [1]
- FEI/PHILIPS EM420 [1]
- JEOL 2010UHR [1]
- JEOL 4000EX [1]
Electron Source
- FIELD EMISSION GUN [601]
- LAB6 [57]
- TUNGSTEN HAIRPIN [10]
- OTHER [1]
Film or detector model
- KODAK SO-163 FILM [139]
- GATAN K2 SUMMIT 4K X 4K [114]
- TVIPS TEMCAM-F416 4K X 4K [71]
- GATAN K3 6K X 4K [42]
- GATAN K3 BIOQUANTUM 6K X 4K [41]
- FEI FALCON IV 4K X 4K [40]
- OTHER [38]
- GATAN ULTRASCAN 4000 4K X 4K [29]
- FEI FALCON II 4K X 4K [21]
- GATAN K2 QUANTUM 4K X 4K [15]
- GATAN ULTRASCAN 1000 2K X 2K [11]
- TFS FALCON 4I 4K X 4K [11]
- TVIPS TEMCAM-F224 2K X 2K [10]
- DIRECT ELECTRON DE-20 5K X 3K [9]
- GENERIC GATAN [9]
- GATAN MULTISCAN [8]
- GENERIC CCD [7]
- FEI EAGLE 4K X 4K [6]
- TVIPS TEMCAM-F216 2K X 2K [5]
- DECTRIS ARINA 0.2K X 0.2K [4]
- DIRECT ELECTRON DE-64 8K X 8K [4]
- FEI FALCON III 4K X 4K [4]
- GATAN K2 4K X 4K [4]
- DIRECT ELECTRON DE-16 4K X 4K [3]
- GENERIC GATAN 4K X 4K [3]
- FEI FALCON I 4K X 4K [2]
- GATAN K3 BIOCONTINUUM 6K X 4K [2]
- DIRECT ELECTRON DE-12 4K X 3K [1]
- FEI EAGLE 2K X 2K [1]
- GATAN K2 BASE 4K X 4K [1]
- GATAN ORIUS SC200 2K X 2K [1]
- GENERIC CCD 2K X 2K [1]
- GENERIC GATAN 2K X 2K [1]
- KODAK 4489 FILM [1]
- TVIPS TEMCAM-F415 4K X 4K [1]
External links
- PDB [668]
- EMPIAR [54]
- UniProt [47]
- AlphaFold DB [44]
- PDBe-Kb [39]
- InterPro [20]
- Gene Ontology [16]
- Pfam [10]
- Complex Portal [6]
- ChEBI [2]
- DrugBank [2]
- SCOP2 [1]
CryoEM
Release date: July 29, 2026
EM Method: Tomography
EM Method: Tomography
Yue M, Zhu Y, Wu H, Yan S, Zhang J, Chang M, Liu L, Huang H, Lu J, Wu W, Chen R, Wu S, Gao Y, Cao Y, Ding H, Zheng Q, Wang Y, Yuan Q, Xiong H, Tian K, Zhang T, Xia N
iScience (2025) 28 pp. 113714-113714 [ Pubmed: 41312378 DOI: doi:10.1016/j.isci.2025.113714 ]
CryoEM
Release date: July 29, 2026
EM Method: Tomography
EM Method: Tomography
Yue M, Zhu Y, Wu H, Yan S, Zhang J, Chang M, Liu L, Huang H, Lu J, Wu W, Chen R, Wu S, Gao Y, Cao Y, Ding H, Zheng Q, Wang Y, Yuan Q, Xiong H, Tian K, Zhang T, Xia N
iScience (2025) 28 pp. 113714-113714 [ Pubmed: 41312378 DOI: doi:10.1016/j.isci.2025.113714 ]
CryoEM
Release date: July 15, 2026
EM Method: Tomography
EM Method: Tomography
Guo Q, Qian YW, Chen C, Zheng XY
To Be Published
CryoEM
Release date: July 15, 2026
EM Method: Tomography
EM Method: Tomography
Guo Q, Qian YW, Chen C, Zheng XY
To Be Published
CryoEM
Release date: July 15, 2026
EM Method: Tomography
EM Method: Tomography
Guo Q, Qian YW, Chen C, Zheng XY
To Be Published
CryoEM
Release date: July 15, 2026
EM Method: Tomography
EM Method: Tomography
Guo Q, Qian YW, Chen C, Zheng XY
To Be Published
CryoEM
Release date: July 15, 2026
EM Method: Tomography
EM Method: Tomography
Guo Q, Qian YW, Chen C, Zheng XY
To Be Published
CryoEM
Release date: June 24, 2026
EM Method: Tomography
EM Method: Tomography
Joest M, Mollat CL, Mutschler L, Rodriguez-Franco M, Sivabalasarma S, Drepper F, Huesgen PF, Ott T, Albers S-V
To Be Published
CryoEM
Release date: June 24, 2026
EM Method: Tomography
EM Method: Tomography
Joest M, Mollat CL, Mutschler L, Rodriguez-Franco M, Sivabalasarma S, Drepper F, Huesgen PF, Ott T, Albers S-V
To Be Published
CryoEM
Release date: June 24, 2026
EM Method: Tomography
EM Method: Tomography
Kieninger AK, Li Y, Janovic A, Haanappel E, Tokarz P, Gueroult M, Chavent M, Maldener I, Weiss GL
Cell Rep (2026) 45 pp. 117677-117677 [ Pubmed: 42424141 DOI: doi:10.1016/j.celrep.2026.117677 ]
Filter By
Current Database
- EMDB [669]
Current status
- REL [669]
Sample type
- Sample [276]
- Virus [168]
- Cellular component [161]
- Cell [153]
- Complex [107]
- Protein [102]
- Tissue [35]
- Ligand [5]
- RNA [5]
- Other [1]
Organism
- Homo sapiens [109]
- Chlamydomonas reinhardtii [75]
- Mus musculus [58]
- Saccharomyces cerevisiae [21]
- Rattus norvegicus [19]
- Danio rerio [19]
- Escherichia coli [18]
- Sus scrofa [12]
- Saccharomyces cerevisiae [11]
- Human immunodeficiency virus 1 [10]
- Human herpesvirus 1 [9]
- Enterovirus c [9]
- Physcomitrium patens [9]
- Drosophila melanogaster [9]
- Vibrio cholerae [8]
- Bos taurus [8]
- Suid alphaherpesvirus 1 [7]
- Oryctolagus cuniculus [7]
- Mycobacterium phage bxb1 [6]
- Chikungunya virus [6]
- Enterobacteria phage hk97 [6]
- Yersinia entomophaga [6]
- Feline calicivirus [5]
- Enterovirus b [5]
- Synthetic construct [5]
- Haloarcula hispanica virus sh1 [5]
- Trypanosoma brucei [5]
- Felis catus [5]
- Pseudoalteromonas phage pm2 [4]
- Salmonella phage p22 [4]
- Phage gifsy-2 [4]
- Bacillus thuringiensis [4]
- Escherichia coli [4]
- Enterobacteria phage t4 [4]
- Severe acute respiratory syndrome coronavirus [4]
- Human mastadenovirus c [4]
- (no species) [4]
- Megathura crenulata [4]
- Plasmodium falciparum [4]
- Caenorhabditis elegans [4]
- (no species) [3]
- Cavia porcellus [3]
- Unidentified adenovirus [3]
- Pseudomonas phage phi6 [3]
- West nile virus [3]
- Influenza a virus [3]
- Parechovirus a [3]
- Chaetomium thermophilum [3]
- Deinococcus radiodurans [3]
- Thermus thermophilus [3]
- Bunyamwera orthobunyavirus [3]
- Shigella flexneri [3]
- Chlorocebus aethiops [3]
- Human herpesvirus 3 [2]
- Hepatitis b virus [2]
- Canine mastadenovirus a [2]
- Human papillomavirus [2]
- Pseudomonas virus prd1 [2]
- Semliki forest virus [2]
- Hepacivirus c [2]
- Vesicular stomatitis virus [2]
- Synechocystis sp. pcc 6803 [2]
- Equine infectious anemia virus [2]
- Mason-pfizer monkey virus [2]
- Litorilinea aerophila [2]
- Hiv-1 vector pnl4-3 [2]
- Human respiratory syncytial virus [2]
- Yersinia phage phir1-37 [2]
- Enterovirus b [2]
- Plasmodium falciparum [2]
- Toxoplasma gondii [2]
- Influenza a virus [2]
- Enterovirus a [2]
- Magnetospirillum gryphiswaldense [2]
- Schizosaccharomyces pombe [2]
- Enterobacteria phage cus-3 [2]
- Trypanosoma brucei [2]
- Toxoplasma gondii [2]
- Brochothrix phage nf5 [2]
- African horse sickness virus [2]
- Salmonella enterica [2]
- (no species) [1]
- Mus sp. [1]
- Human herpesvirus 1 [1]
- Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [1]
- Epstein-barr virus (strain gd1) [1]
- Simian virus 40 [1]
- Bacillus phage spp1 [1]
- Great island virus [1]
- Rotavirus a [1]
- Avian infectious bursal disease virus [1]
- Sindbis virus [1]
- Venezuelan equine encephalitis virus [1]
- Western equine encephalitis virus [1]
- Candidatus pseudothioglobus singularis [1]
- Synechococcus elongatus [1]
- Alphainfluenzavirus influenzae [1]
- Simian immunodeficiency virus [1]
- Murine leukemia virus [1]
- Avian leukosis virus [1]
EM Method
- Tomography [331]
- Single-particle [163]
- Subtomogram averaging [135]
- Helical reconstruction [35]
- Electron Crystallography [5]
Resolution
- ≥ 2Å and < 3Å [1]
- ≥ 3Å and < 4Å [3]
- ≥ 4Å and < 5Å [3]
- ≥ 5Å and < 6Å [2]
- ≥ 6Å and < 8Å [17]
- ≥ 8Å and < 12Å [73]
- ≥ 12Å and < 16Å [43]
- ≥ 16Å and < 20Å [31]
- ≥ 20Å and < 30Å [57]
- ≥ 30Å [112]
Model molecular weight
- 0-50 kDa [1]
- 50-100 kDa [4]
- 100-250 kDa [7]
- 250-500 kDa [13]
- 500-1000 kDa [2]
- 1-2 MDa [8]
- 2-5 MDa [14]
- 5-10 MDa [11]
- > 10 MDa [9]
Release Date
- 2026 [58]
- 2025 [35]
- 2024 [72]
- 2023 [49]
- 2022 [41]
- 2021 [23]
- 2020 [27]
- 2019 [22]
- 2018 [35]
- 2017 [21]
- 2016 [46]
- 2015 [17]
- 2014 [46]
- 2013 [38]
- 2012 [34]
- 2011 [17]
- 2010 [17]
- 2009 [22]
- 2008 [8]
- 2007 [7]
- 2006 [9]
- 2005 [16]
- 2004 [1]
- 2003 [5]
- 2002 [3]
Author by name
- Kikkawa M [81]
- Oda T [69]
- Yanagisawa H [56]
- Baumeister W [53]
- Butcher SJ [40]
- Conway JF [31]
- Beck F [27]
- Guo Q [27]
- Elbaum M [25]
- Plitzko JM [24]
- Briggs JAG [23]
- Chiu W [21]
- Laurinmaki P [21]
- Qu L [20]
- Tang X [20]
- Yagi T [20]
- Bamford DH [19]
- Abe T [18]
- Fernandez-busnadiego R [18]
- Schulman BA [18]
- Wilfling F [18]
- Yamaguchi H [18]
- Enenkel C [17]
- Ernst OP [17]
- Saibil HR [17]
- Schoehn G [17]
- Chang YW [16]
- Cheng N [16]
- Kirchweger P [16]
- Chang Y-W [15]
- Homa FL [15]
- Poege M [15]
- Steven AC [15]
- Wu W [15]
- Grigorieff N [14]
- Huet A [14]
- Huffman JB [14]
- Huiskonen JT [13]
- Jensen GJ [13]
- Wolf SG [13]
- Effantin G [12]
- Morikawa M [12]
- Pilhofer M [12]
- Plitzko J [12]
- Bhella D [11]
- Dickmanns M [11]
- Fandrich M [11]
- Frommer WB [11]
- Grunewald K [11]
- Klumpe S [11]
- Liu J [11]
- Makhov AM [11]
- Miras M [11]
- Schmid MF [11]
- Schmidt M [11]
- Schur FKM [11]
- Simon R [11]
- Taylor KA [11]
- Xu P [11]
- Annamalai K [10]
- Chretien D [10]
- Guesdon A [10]
- Kamiya R [10]
- Mielke T [10]
- Morado DR [10]
- Schampers R [10]
- Schmidt A [10]
- Seitsonen JJT [10]
- Susi P [10]
- Tang XM [10]
- Varsano N [10]
- Winkler H [10]
- Boer Iwema R [9]
- Close W [9]
- Comet M [9]
- Dijkman PM [9]
- Drulyte I [9]
- Faendrich M [9]
- Franke T [9]
- Grollios F [9]
- Hora M [9]
- Hyypia T [9]
- Jacobs-sera D [9]
- Kivela HM [9]
- Li Z [9]
- Lopez HR [9]
- Masiulis S [9]
- Neumann M [9]
- Ortega DR [9]
- Pryor Jr Ee [9]
- Raschdorf O [9]
- Reif B [9]
- Rettberg LA [9]
- Ruigrok RW [9]
- Schmidt V [9]
- Shakeel S [9]
- Toropova K [9]
- Zhang Y [9]
- Barr ZK [8]
- Belnap DM [8]
Author by ORCID
- Kikkawa M [81]
- Oda T [69]
- Yanagisawa H [54]
- Butcher SJ [38]
- Conway JF [29]
- Baumeister W [21]
- Yagi T [20]
- Briggs JAG [19]
- Laurinmaki P [18]
- Schulman BA [18]
- Wilfling F [18]
- Yamaguchi H [18]
- Chiu W [18]
- Schoehn G [17]
- Elbaum M [16]
- Plitzko JM [16]
- Guo Q [16]
- Chang YW [15]
- Bamford DH [14]
- Fernandez-busnadiego R [14]
- Huiskonen JT [13]
- Grigorieff N [13]
- Pilhofer M [12]
- Effantin G [12]
- Morikawa M [12]
- Grunewald K [11]
- Klumpe S [11]
- Bhella D [11]
- Kirchweger P [10]
- Susi P [10]
- Pryor Jr Ee [9]
- Hora M [9]
- Neumann M [9]
- Toropova K [9]
- Drulyte I [9]
- Raschdorf O [9]
- Shakeel S [9]
- Schampers R [9]
- Frommer WB [8]
- Engel BD [8]
- Simon R [8]
- Clare DK [8]
- Miras M [8]
- Hogle JM [8]
- Rettberg LA [8]
- Barr ZK [8]
- Pittler SJ [8]
- Schmid MF [8]
- Estrozi LF [8]
- Wensel TG [8]
- Dickmanns M [8]
- Egelman EH [8]
- Gory-faure S [7]
- Arnal I [7]
- Prazak V [7]
- Schulze WX [7]
- Kjr A [7]
- Akhmanova A [7]
- Duchesne L [7]
- Bosc C [7]
- Denarier E [7]
- Wolf SG [7]
- Serre L [7]
- Chretien D [7]
- Mitsuoka K [7]
- Gopal D [7]
- Steinmetz MO [7]
- Chipman PR [7]
- Schur FKM [7]
- Wu J [7]
- Huet A [6]
- Beton JG [6]
- Hipp MS [6]
- Weiss GL [6]
- Saibil HR [6]
- Freeman KG [6]
- Mondal S [6]
- Monistrol J [6]
- Ho MC [6]
- Johnston EC [6]
- Takeda H [6]
- Filman DJ [6]
- Yanagisawa HA [6]
- Winkler DC [6]
- Hurst M [5]
- Baker TS [5]
- Sinkovits RS [5]
- Roine E [5]
- Raunser S [5]
- Aksyuk A [5]
- Schoof M [5]
- Strauss M [5]
- Wakabayashi KI [5]
- Feldmuller M [5]
- Sun S [5]
- Koplas A [5]
- Shi Y [5]
- Kukulski W [5]
- Ericson CF [5]
- Khodjakov A [5]
Journal
- PNAS [61]
- TO BE PUBLISHED [55]
- J VIROL [51]
- CELL [49]
- NAT COMMUN [45]
- ELIFE [32]
- MOL BIOL CELL [30]
- BIORXIV [27]
- J STRUCT BIOL [23]
- NAT MICROBIOL [22]
- SCIENCE [20]
- STRUCTURE [19]
- J MOL BIOL [17]
- NAT STRUCT MOL BIOL [15]
- J CELL BIOL [14]
- J CELL SCI [14]
- NATURE [14]
- EMBO J [12]
- SCI ADV [12]
- PLOS PATHOG [11]
- ACTA CRYSTALLOGR D STRUCT BIOL [10]
- VIROLOGY [10]
- NAT CELL BIOL [9]
- EMBO REP [8]
- NAT METHODS [8]
- J BIOL CHEM [7]
- MOL CELL [7]
- NAT PLANTS [7]
- CURR BIOL [6]
- MICROSC MICROANAL [6]
- CYTOSKELETON [5]
- ISCIENCE [5]
- J STRUCT BIOL X [5]
- MBIO [5]
- PLOS BIOL [5]
- BLOOD [4]
- CELL REP [4]
- COMMUN BIOL [4]
- J BACTERIOL [4]
- J MICROSC [4]
- RES SQ [4]
- NUCLEIC ACIDS RES [3]
- PLOS ONE [3]
- J IMMUNOL [2]
- MOL MICROBIOL [2]
- SCI REP [2]
- ADV SCI [1]
- BIOL IMAGING [1]
- BIOPHYS J [1]
- CELL DISCOV [1]
- CELL MICROBIOL [1]
- CELLS [1]
- ENVIRON MICROBIOL [1]
- FEBS LETT [1]
- FRONT CELL NEUROSCI [1]
- FRONT MICROBIOL [1]
- GENES CELLS [1]
- HUM GENE THER [1]
- INT J MOL SCI [1]
- J GEN VIROL [1]
- J VIS EXP [1]
- NAT PROTOC [1]
- OPEN BIOL [1]
- PLOS COMPUT BIOL [1]
- VIRUSES [1]
Software
- IMOD [186]
- AUTO3DEM [31]
- PEET [31]
- IMOD, PEET [28]
- EMAN2 [25]
- SPIDER [24]
- PRIISM/IVE [23]
- TOMO3D [23]
- ETOMO [22]
- CTFFIND [19]
- FREALIX [14]
- PEET, RUBY-HELIX [13]
- PROTOMO [11]
- EM3DR2 [10]
- RELION [9]
- WARP [9]
- CHIMERA [8]
- EMAN [8]
- PFT2, EM3DR2, POR, P3DR [7]
- MATLAB [6]
- CTFPHASEFLIP [5]
- FREALIGN [5]
- MRC [5]
- NOVACTF [5]
- AUTO3DEM V3.13 [4]
- EMBL, P3DR [4]
- EMFIT [4]
- ETOMO, IMOD [4]
- PFT - EM3DR [4]
- PFT2, EM3DR2 [4]
- AMIRAMOL 3.0 [3]
- ETOMO, FROM, IMOD, SOFTWARE [3]
- GCTF [3]
- IPET [3]
- PFT EM3DR [3]
- SPIDER, IHRSR [3]
- TOMOCTF [3]
- 2DX [2]
- AUTO3DEM, CTFFIND3 [2]
- AUTO3DEM, ROBEM, AUTOPP [2]
- EM3DR2, P3DR [2]
- EMBL-ICOS, MRC [2]
- IMAGIC, FREALIGN AND SPIDER [2]
- IMOD, PEET, BSOFT, EMAN2, SPARX [2]
- MDFF [2]
- P3DR [2]
- PFT, POR, EM3DR2, P3DR [2]
- PFT2 AND EM3DR2 [2]
- PFT2 EM3DR2 [2]
- SITUS [2]
- SPIDER, SPARX [2]
- SPIER, IMAGIC, BKRP [2]
- UCSF CHIMERA [2]
- URO [2]
- 2DX_AUTOMATOR, CTFFIND, HELIXBOXER, IHRSR/SPIDER [1]
- ARETOMO [1]
- AUTO [1]
- AUTO3DEM V3.07 [1]
- AUTO3DEM V4.02 [1]
- BSOFT, PFT2, EM3DR2 [1]
- BUSTER-TNT [1]
- CHARMM [1]
- CHIMERA, PYMOL, VMD, NAMD, MDFF, BSOFT [1]
- CHIMERA,SCULPTOR [1]
- CISTEM [1]
- COOT [1]
- CRYOSPARC [1]
- CTFFIND3, EMAN2, AND, AUTO3DEM [1]
- DYNAMO [1]
- EM3DR [1]
- EMAN, BSOFT, PFT2, EM3DR2 [1]
- EMBL [1]
- EMBL-ICOS [1]
- EMFIT CHENG ET AL 1995 [1]
- EMFIT M. ROSSMANN CHENG, R., KUHN, R., OLSON, N., ROSSMANN, M., AND BAKER, T. 1995 . NUCLEOCAPSID AND GLYCOPROTEIN ORGANIZATION IN AN ENVELOPED VIRUS. CELL 80, 621-630. [1]
- EMPFT [1]
- FOCUS [1]
- FOLDHUNTER AND HOMEMADE SOFTWARE [1]
- GAP [1]
- GROMACS [1]
- HAND-MADE, PROGRAMS [1]
- HANDMADE [1]
- IHRSR [1]
- IMAGIC [1]
- IMAGIC SPIDER [1]
- IMAGIC, EMAN, BSOFT [1]
- IMAGIC, EMAN, FREALIGN, SPIDER, GAP [1]
- IMAGIC-5, SPIDER [1]
- IMOD, RAPTOR [1]
- IMOD, TOMO3D [1]
- IMODFIT [1]
- JSPR [1]
- MATLAB, IMAGEV [1]
- MOLREP [1]
- MRC, CCP4, HOMEMADE [1]
- O [1]
- PARALLELIZED EMPFT, EM3DR [1]
- PFT [1]
- PFT EM3DR PFT2 EM3DR2 [1]
- PFT, POR, EM3DR, P3DR [1]
Microscope
- FEI TITAN KRIOS [168]
- TFS KRIOS [95]
- FEI TECNAI F20 [82]
- FEI POLARA 300 [49]
- JEOL 3100FFC [43]
- FEI/PHILIPS CM200FEG [29]
- JEOL 2200FS [21]
- OTHER [18]
- FEI TECNAI 20 [17]
- FEI/PHILIPS CM300FEG/T [16]
- FEI TALOS ARCTICA [14]
- FEI TECNAI 12 [14]
- FEI TECNAI F30 [13]
- FEI/PHILIPS CM200T [12]
- JEOL 2100 [12]
- JEOL 2010F [9]
- TFS GLACIOS [9]
- FEI/PHILIPS CM200FEG/ST [5]
- JEOL 3100FEF [5]
- HITACHI H3000 UHVEM [4]
- FEI/PHILIPS CM120T [3]
- JEOL 1200EXII [3]
- JEOL 2200FSC [3]
- JEOL 3000SFF [3]
- JEOL 3200FSC [3]
- JEOL CRYO ARM 300 [3]
- JEOL 1200 [2]
- JEOL 1400 [2]
- JEOL 2100F [2]
- TFS TALOS [2]
- ZEISS LIBRA120PLUS [2]
- FEI TECNAI SPIRIT [1]
- FEI TITAN [1]
- FEI/PHILIPS CM300FEG/ST [1]
- FEI/PHILIPS EM420 [1]
- JEOL 2010UHR [1]
- JEOL 4000EX [1]
Electron Source
- FIELD EMISSION GUN [601]
- LAB6 [57]
- TUNGSTEN HAIRPIN [10]
- OTHER [1]
Film or detector model
- KODAK SO-163 FILM [139]
- GATAN K2 SUMMIT 4K X 4K [114]
- TVIPS TEMCAM-F416 4K X 4K [71]
- GATAN K3 6K X 4K [42]
- GATAN K3 BIOQUANTUM 6K X 4K [41]
- FEI FALCON IV 4K X 4K [40]
- OTHER [38]
- GATAN ULTRASCAN 4000 4K X 4K [29]
- FEI FALCON II 4K X 4K [21]
- GATAN K2 QUANTUM 4K X 4K [15]
- GATAN ULTRASCAN 1000 2K X 2K [11]
- TFS FALCON 4I 4K X 4K [11]
- TVIPS TEMCAM-F224 2K X 2K [10]
- DIRECT ELECTRON DE-20 5K X 3K [9]
- GENERIC GATAN [9]
- GATAN MULTISCAN [8]
- GENERIC CCD [7]
- FEI EAGLE 4K X 4K [6]
- TVIPS TEMCAM-F216 2K X 2K [5]
- DECTRIS ARINA 0.2K X 0.2K [4]
- DIRECT ELECTRON DE-64 8K X 8K [4]
- FEI FALCON III 4K X 4K [4]
- GATAN K2 4K X 4K [4]
- DIRECT ELECTRON DE-16 4K X 4K [3]
- GENERIC GATAN 4K X 4K [3]
- FEI FALCON I 4K X 4K [2]
- GATAN K3 BIOCONTINUUM 6K X 4K [2]
- DIRECT ELECTRON DE-12 4K X 3K [1]
- FEI EAGLE 2K X 2K [1]
- GATAN K2 BASE 4K X 4K [1]
- GATAN ORIUS SC200 2K X 2K [1]
- GENERIC CCD 2K X 2K [1]
- GENERIC GATAN 2K X 2K [1]
- KODAK 4489 FILM [1]
- TVIPS TEMCAM-F415 4K X 4K [1]
External links
- PDB [668]
- EMPIAR [54]
- UniProt [47]
- AlphaFold DB [44]
- PDBe-Kb [39]
- InterPro [20]
- Gene Ontology [16]
- Pfam [10]
- Complex Portal [6]
- ChEBI [2]
- DrugBank [2]
- SCOP2 [1]