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Filter By

Current Database

  • EMDB [132]

Current status

  • REL [132]

Sample type

  • Protein [129]
  • Complex [120]
  • Ligand [103]
  • RNA [43]
  • DNA [16]
  • Cellular component [5]
  • Sample [5]
  • Cell [2]
  • Other [2]
  • Tissue [2]

Organism

  • Homo sapiens [50]
  • Synthetic construct [23]
  • Severe acute respiratory syndrome coronavirus [9]
  • Chaetomium thermophilum [9]
  • Danio rerio [9]
  • Rattus norvegicus [7]
  • Escherichia coli [7]
  • Xenopus laevis [7]
  • Oryctolagus cuniculus [7]
  • Mus musculus [5]
  • Legionella pneumophila [5]
  • Sus scrofa [5]
  • Saccharomyces cerevisiae [4]
  • Saccharomyces cerevisiae [4]
  • Methanothermobacter thermautotrophicus [3]
  • Oryza sativa [3]
  • Escherichia coli [3]
  • Mycobacterium tuberculosis [2]
  • Severe acute respiratory syndrome coronavirus [2]
  • Thermococcus kodakarensis [2]
  • Pleurotus ostreatus [2]
  • Amanita phalloides [2]
  • Drosophila melanogaster [2]
  • Lama glama [2]
  • Human herpesvirus 1 [1]
  • Human herpesvirus 1 [1]
  • Human mastadenovirus c [1]
  • Unidentified adenovirus [1]
  • Enterobacteria phage m13 [1]
  • Clostridium virus phicpv4 [1]
  • Spraguea lophii [1]
  • Clostridium perfringens [1]
  • Thermobifida fusca [1]
  • Mycolicibacterium smegmatis [1]
  • Gaunavirus ga1 [1]
  • Thermobifida fusca [1]
  • Spinacia oleracea [1]
  • Porphyridium purpureum [1]
  • Haliotis diversicolor [1]
  • Gluconobacter japonicus [1]
  • Shigella flexneri [1]
  • Aquifex aeolicus [1]
  • Vibrio vulnificus [1]
  • Spodoptera frugiperda [1]
  • Bos taurus [1]

EM Method

  • Single-particle [131]
  • Subtomogram averaging [1]

Resolution

  • ≥ 2Å and < 3Å [37]
  • ≥ 3Å and < 4Å [72]
  • ≥ 4Å and < 5Å [5]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [4]
  • ≥ 8Å and < 12Å [6]
  • ≥ 12Å and < 16Å [3]
  • ≥ 20Å and < 30Å [1]
  • ≥ 30Å [3]

Release Date

  • 2024 [6]
  • 2023 [54]
  • 2022 [30]
  • 2021 [15]
  • 2020 [8]
  • 2019 [6]
  • 2018 [5]
  • 2017 [1]
  • 2016 [2]
  • 2015 [2]
  • 2014 [1]
  • 2013 [1]
  • 2012 [1]

Author by name

  • Amunts A [12]
  • Cheng J [11]
  • Beckmann R [10]
  • Gouaux E [10]
  • Yu J [10]
  • Zhu H [10]
  • Berninghausen O [9]
  • Denk T [9]
  • Du J [9]
  • Falquet L [9]
  • Fischer P [9]
  • Flemming D [9]
  • Fromm L [9]
  • Greiner T [9]
  • Hurt E [9]
  • Kellner N [9]
  • Lape R [9]
  • Lau B [9]
  • Lu W [9]
  • Singh V [9]
  • Sivilotti L [9]
  • Thoms M [9]
  • Aibara S [8]
  • Rubinstein JL [7]
  • Zhang X [7]
  • Abbas YM [6]
  • Chen RE [6]
  • Diamond MS [6]
  • Itoh Y [6]
  • Modelska A [6]
  • Yan N [6]
  • Yan Z [6]
  • Zhao Y [6]
  • Chen S [5]
  • Chen Z [5]
  • Chow RD [5]
  • Clark P [5]
  • Cook M [5]
  • Dong MB [5]
  • Fang Z [5]
  • Gao S [5]
  • Hu Y [5]
  • Klein D [5]
  • Lei J [5]
  • Li T [5]
  • Mankowski MC [5]
  • Nelson B [5]
  • Peng L [5]
  • Ren P [5]
  • Sutton R [5]
  • Tripler T [5]
  • Wang G [5]
  • Wei J [5]
  • Wilen CB [5]
  • Wu C [5]
  • Xiong Y [5]
  • Ye L [5]
  • Zhang Z [5]
  • Zhao M [5]
  • Ban N [4]
  • Bhattacharjee S [4]
  • Bradley NP [4]
  • Brown PZ [4]
  • Brown ZP [4]
  • Chazin WJ [4]
  • Chen Y [4]
  • Dadhwal P [4]
  • Durie CL [4]
  • Eichman BF [4]
  • Feng X [4]
  • Frank J [4]
  • Huang G [4]
  • Huang Y [4]
  • Jackman JE [4]
  • Leibundgut M [4]
  • Maji S [4]
  • Mullins EA [4]
  • Ohi MD [4]
  • Salay LE [4]
  • Wang X [4]
  • Wu J [4]
  • Wu Q [4]
  • Agarwal S [3]
  • Allen TW [3]
  • Aricescu AR [3]
  • Ast T [3]
  • Barrientos A [3]
  • Bei W [3]
  • Bei WW [3]
  • Bilsel O [3]
  • Chakravarthy S [3]
  • Chen K [3]
  • Chicherin I [3]
  • Chirgadze DY [3]
  • Cramer P [3]
  • Das S [3]
  • Desai R [3]
  • Dienemann C [3]
  • Dong Q [3]
  • Dong QH [3]

Journal

  • CELL [19]
  • NAT COMMUN [15]
  • NAT STRUCT MOL BIOL [15]
  • TO BE PUBLISHED [11]
  • NATURE [10]
  • ELIFE [9]
  • EMBO REP [9]
  • STRUCTURE [6]
  • MOL CELL [5]
  • PLOS BIOL [5]
  • NAT CHEM BIOL [4]
  • SCI ADV [4]
  • BIORXIV [3]
  • COMMUN CHEM [3]
  • PNAS [3]
  • SCIENCE [3]
  • COMMUN BIOL [2]
  • IUCRJ [2]
  • VIRUSES [2]
  • ACS CATAL [1]
  • CELL DISCOV [1]
  • CELL REP [1]
  • CELL RES [1]
  • EMBO J [1]
  • J.THROMB.HAEMOST. [1]
  • MOL MICROBIOL [1]
  • NAT MICROBIOL [1]
  • PLANT COMMUN. [1]
  • PROTEIN CELL [1]
  • RES SQ [1]

Software

  • RELION [30]
  • CRYOSPARC [16]
  • CHIMERA [3]
  • CHIMERA, FLEX-EM, MODELLER, TEMPY [2]
  • EMAN2 [2]
  • IMAGIC, SPIDER [2]
  • PHENIX [2]
  • WARP [2]
  • CISTEM [1]
  • CTFFIND [1]
  • CTFFIND3, RELION [1]
  • EMAN [1]
  • EMAN1 [1]
  • EMAN2, SPIDER, BESPOKE-2D-ALIGNMENT, BESPOKE-X-AND-Y-SHIFTING [1]
  • FREALIGN [1]
  • GCTF [1]
  • SPIDER [1]

Microscope

  • FEI TITAN KRIOS [99]
  • TFS KRIOS [10]
  • FEI TALOS ARCTICA [7]
  • FEI POLARA 300 [5]
  • FEI TITAN [4]
  • FEI/PHILIPS CM120T [2]
  • FEI TECNAI 12 [1]
  • FEI TECNAI 20 [1]
  • FEI TECNAI ARCTICA [1]
  • JEOL 3200FSC [1]
  • JEOL CRYO ARM 300 [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [130]
  • LAB6 [2]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [42]
  • GATAN K3 6K X 4K [34]
  • GATAN K3 BIOQUANTUM 6K X 4K [20]
  • FEI FALCON IV 4K X 4K [10]
  • GATAN K2 QUANTUM 4K X 4K [6]
  • FEI FALCON III 4K X 4K [5]
  • GATAN K2 BASE 4K X 4K [4]
  • FEI FALCON II 4K X 4K [3]
  • GATAN ULTRASCAN 4000 4K X 4K [2]
  • TVIPS TEMCAM-F224 2K X 2K [2]
  • FEI EAGLE 4K X 4K [1]
  • FEI FALCON I 4K X 4K [1]
  • KODAK SO-163 FILM [1]
  • OTHER [1]
  • TFS FALCON 4I 4K X 4K [1]

External links

  • AlphaFold DB [122]
  • EMPIAR [12]
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Showing 1 - 10 of 132. Page 1 of 14
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EMD-38109
Download Map
3D View
MCM in the Apo state.
Composite map
CryoEM
Release date: Jan. 17, 2024
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 8x7t
Q-score: 0.374
Similar entry percentile: 16%

Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Li Q, Wang D, Gilbert RJC, Zhang P

Nat Commun (2024) 15 pp. 10304-10304 [ DOI: doi:10.1038/s41467-024-53745-w Pubmed: 39604363 ]

EMD-38111
Download Map
3D View
MCM in complex with dsDNA in presence of ATP.
Composite map
CryoEM
Release date: Jan. 17, 2024
Resolution: 3.57 Å
EM Method: Single-particle
Fitted PDBs: 8x7u
Q-score: 0.347
Similar entry percentile: 19%

Ma J, Yi G, Ye M, MacGregor-Chatwin C, Sheng Y, Lu Y, Li M, Li Q, Wang D, Gilbert RJC, Zhang P

Nat Commun (2024) 15 pp. 10304-10304 [ DOI: doi:10.1038/s41467-024-53745-w Pubmed: 39604363 ]

EMD-16966
Download Map
3D View
Small subunit of yeast mitochondrial ribosome in complex with METTL17/Rsm22.
CryoEM
Release date: Jan. 10, 2024
Resolution: 2.57 Å
EM Method: Single-particle
Fitted PDBs: 8om2
Q-score: 0.602
Similar entry percentile: 80%

Ast T, Itoh Y, Sadre S, McCoy JG, Namkoong G, Wengrod JC, Chicherin I, Joshi PR, Kamenski P, Suess DLM, Amunts A, Mootha VK

Mol Cell (2024) 84 pp. 359- [ DOI: doi:10.1016/j.molcel.2023.12.016 Pubmed: 38199006 ]

EMD-16967
Download Map
3D View
Small subunit of yeast mitochondrial ribosome in complex with IF3/Aim23.
CryoEM
Release date: Jan. 10, 2024
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 8om3
Q-score: 0.564
Similar entry percentile: 80%

Ast T, Itoh Y, Sadre S, McCoy JG, Namkoong G, Wengrod JC, Chicherin I, Joshi PR, Kamenski P, Suess DLM, Amunts A, Mootha VK

Mol Cell (2024) 84 pp. 359- [ DOI: doi:10.1016/j.molcel.2023.12.016 Pubmed: 38199006 ]

EMD-16968
Download Map
3D View
Small subunit of yeast mitochondrial ribosome.
CryoEM
Release date: Jan. 10, 2024
Resolution: 2.32 Å
EM Method: Single-particle
Fitted PDBs: 8om4
Q-score: 0.654
Similar entry percentile: 85%

Ast T, Itoh Y, Sadre S, McCoy JG, Namkoong G, Wengrod JC, Chicherin I, Joshi PR, Kamenski P, Suess DLM, Amunts A, Mootha VK

Mol Cell (2024) 84 pp. 359- [ DOI: doi:10.1016/j.molcel.2023.12.016 Pubmed: 38199006 ]

EMD-17957
Download Map
3D View
Chaetomium thermophilum pre-60S State 4 - post-5S rotation with Rix1 complex without Foot - composite structure
CryoEM
Release date: Jan. 10, 2024
Resolution: 2.91 Å
EM Method: Single-particle
Fitted PDBs: 8pv8
Q-score: 0.559
Similar entry percentile: 80%

Thoms M, Lau B, Cheng J, Fromm L, Denk T, Kellner N, Flemming D, Fischer P, Falquet L, Berninghausen O, Beckmann R, Hurt E

EMBO Rep (2023) 24 pp. e57984-e57984 [ DOI: doi:10.15252/embr.202357984 Pubmed: 37921038 ]

EMD-42510
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3D View
Structural and biochemical investigations of a HEAT-repeat protein involved in the cytosolic iron-sulfur cluster assembly pathway
Composite map
CryoEM
Release date: Dec. 27, 2023
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8usp
Q-score: 0.37
Similar entry percentile: 16%

Vasquez S, Marquez MD, Brignole EJ, Vo A, Kong S, Park C, Perlstein DL, Drennan CL

Commun Biol (2023) 6 pp. 1276-1276 [ Pubmed: 38110506 DOI: doi:10.1038/s42003-023-05579-3 ]

EMD-41829
Download Map
3D View
Structure of a class A GPCR/agonist complex
CryoEM
Release date: Dec. 20, 2023
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8u1u
Q-score: 0.515
Similar entry percentile: 67%

Sun D, Sun Y, Janezic E, Zhou T, Johnson M, Azumaya C, Noreng S, Chiu C, Seki A, Arenzana TL, Nicoludis JM, Shi Y, Wang B, Ho H, Joshi P, Tam C, Payandeh J, Comps-Agrar L, Wang J, Rutz S, Koerber JT, Masureel M

Nat Commun (2023) 14 pp. 7940-7940 [ DOI: doi:10.1038/s41467-023-43601-8 Pubmed: 38040762 ]

EMD-42990
Download Map
3D View
DNA initiation complex configuration 1 of Xenopus laevis DNA polymerase alpha-primase
CryoEM
Release date: Dec. 20, 2023
Resolution: 11.16 Å
EM Method: Single-particle
Fitted PDBs: 8v6g
Q-score: 0.054
Similar entry percentile: 32%

Mullins EA, Salay LE, Durie CL, Bradley NP, Jackman JE, Ohi MD, Chazin WJ, Eichman BF

Nat Struct Mol Biol (2024) 31 pp. 777-790 [ Pubmed: 38491139 DOI: doi:10.1038/s41594-024-01227-4 ]

EMD-42991
Download Map
3D View
DNA initiation complex configuration 2 of Xenopus laevis DNA polymerase alpha-primase
CryoEM
Release date: Dec. 20, 2023
Resolution: 11.11 Å
EM Method: Single-particle
Fitted PDBs: 8v6h
Q-score: 0.018
Similar entry percentile: 9%

Mullins EA, Salay LE, Durie CL, Bradley NP, Jackman JE, Ohi MD, Chazin WJ, Eichman BF

Nat Struct Mol Biol (2024) 31 pp. 777-790 [ Pubmed: 38491139 DOI: doi:10.1038/s41594-024-01227-4 ]

Sort by: Download
Showing 1 - 10 of 132. Page 1 of 14
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Filter By

Current Database

  • EMDB [132]

Current status

  • REL [132]

Sample type

  • Protein [129]
  • Complex [120]
  • Ligand [103]
  • RNA [43]
  • DNA [16]
  • Cellular component [5]
  • Sample [5]
  • Cell [2]
  • Other [2]
  • Tissue [2]

Organism

  • Homo sapiens [50]
  • Synthetic construct [23]
  • Severe acute respiratory syndrome coronavirus [9]
  • Chaetomium thermophilum [9]
  • Danio rerio [9]
  • Rattus norvegicus [7]
  • Escherichia coli [7]
  • Xenopus laevis [7]
  • Oryctolagus cuniculus [7]
  • Mus musculus [5]
  • Legionella pneumophila [5]
  • Sus scrofa [5]
  • Saccharomyces cerevisiae [4]
  • Saccharomyces cerevisiae [4]
  • Methanothermobacter thermautotrophicus [3]
  • Oryza sativa [3]
  • Escherichia coli [3]
  • Mycobacterium tuberculosis [2]
  • Severe acute respiratory syndrome coronavirus [2]
  • Thermococcus kodakarensis [2]
  • Pleurotus ostreatus [2]
  • Amanita phalloides [2]
  • Drosophila melanogaster [2]
  • Lama glama [2]
  • Human herpesvirus 1 [1]
  • Human herpesvirus 1 [1]
  • Human mastadenovirus c [1]
  • Unidentified adenovirus [1]
  • Enterobacteria phage m13 [1]
  • Clostridium virus phicpv4 [1]
  • Spraguea lophii [1]
  • Clostridium perfringens [1]
  • Thermobifida fusca [1]
  • Mycolicibacterium smegmatis [1]
  • Gaunavirus ga1 [1]
  • Thermobifida fusca [1]
  • Spinacia oleracea [1]
  • Porphyridium purpureum [1]
  • Haliotis diversicolor [1]
  • Gluconobacter japonicus [1]
  • Shigella flexneri [1]
  • Aquifex aeolicus [1]
  • Vibrio vulnificus [1]
  • Spodoptera frugiperda [1]
  • Bos taurus [1]

EM Method

  • Single-particle [131]
  • Subtomogram averaging [1]

Resolution

  • ≥ 2Å and < 3Å [37]
  • ≥ 3Å and < 4Å [72]
  • ≥ 4Å and < 5Å [5]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [4]
  • ≥ 8Å and < 12Å [6]
  • ≥ 12Å and < 16Å [3]
  • ≥ 20Å and < 30Å [1]
  • ≥ 30Å [3]

Release Date

  • 2024 [6]
  • 2023 [54]
  • 2022 [30]
  • 2021 [15]
  • 2020 [8]
  • 2019 [6]
  • 2018 [5]
  • 2017 [1]
  • 2016 [2]
  • 2015 [2]
  • 2014 [1]
  • 2013 [1]
  • 2012 [1]

Author by name

  • Amunts A [12]
  • Cheng J [11]
  • Beckmann R [10]
  • Gouaux E [10]
  • Yu J [10]
  • Zhu H [10]
  • Berninghausen O [9]
  • Denk T [9]
  • Du J [9]
  • Falquet L [9]
  • Fischer P [9]
  • Flemming D [9]
  • Fromm L [9]
  • Greiner T [9]
  • Hurt E [9]
  • Kellner N [9]
  • Lape R [9]
  • Lau B [9]
  • Lu W [9]
  • Singh V [9]
  • Sivilotti L [9]
  • Thoms M [9]
  • Aibara S [8]
  • Rubinstein JL [7]
  • Zhang X [7]
  • Abbas YM [6]
  • Chen RE [6]
  • Diamond MS [6]
  • Itoh Y [6]
  • Modelska A [6]
  • Yan N [6]
  • Yan Z [6]
  • Zhao Y [6]
  • Chen S [5]
  • Chen Z [5]
  • Chow RD [5]
  • Clark P [5]
  • Cook M [5]
  • Dong MB [5]
  • Fang Z [5]
  • Gao S [5]
  • Hu Y [5]
  • Klein D [5]
  • Lei J [5]
  • Li T [5]
  • Mankowski MC [5]
  • Nelson B [5]
  • Peng L [5]
  • Ren P [5]
  • Sutton R [5]
  • Tripler T [5]
  • Wang G [5]
  • Wei J [5]
  • Wilen CB [5]
  • Wu C [5]
  • Xiong Y [5]
  • Ye L [5]
  • Zhang Z [5]
  • Zhao M [5]
  • Ban N [4]
  • Bhattacharjee S [4]
  • Bradley NP [4]
  • Brown PZ [4]
  • Brown ZP [4]
  • Chazin WJ [4]
  • Chen Y [4]
  • Dadhwal P [4]
  • Durie CL [4]
  • Eichman BF [4]
  • Feng X [4]
  • Frank J [4]
  • Huang G [4]
  • Huang Y [4]
  • Jackman JE [4]
  • Leibundgut M [4]
  • Maji S [4]
  • Mullins EA [4]
  • Ohi MD [4]
  • Salay LE [4]
  • Wang X [4]
  • Wu J [4]
  • Wu Q [4]
  • Agarwal S [3]
  • Allen TW [3]
  • Aricescu AR [3]
  • Ast T [3]
  • Barrientos A [3]
  • Bei W [3]
  • Bei WW [3]
  • Bilsel O [3]
  • Chakravarthy S [3]
  • Chen K [3]
  • Chicherin I [3]
  • Chirgadze DY [3]
  • Cramer P [3]
  • Das S [3]
  • Desai R [3]
  • Dienemann C [3]
  • Dong Q [3]
  • Dong QH [3]

Journal

  • CELL [19]
  • NAT COMMUN [15]
  • NAT STRUCT MOL BIOL [15]
  • TO BE PUBLISHED [11]
  • NATURE [10]
  • ELIFE [9]
  • EMBO REP [9]
  • STRUCTURE [6]
  • MOL CELL [5]
  • PLOS BIOL [5]
  • NAT CHEM BIOL [4]
  • SCI ADV [4]
  • BIORXIV [3]
  • COMMUN CHEM [3]
  • PNAS [3]
  • SCIENCE [3]
  • COMMUN BIOL [2]
  • IUCRJ [2]
  • VIRUSES [2]
  • ACS CATAL [1]
  • CELL DISCOV [1]
  • CELL REP [1]
  • CELL RES [1]
  • EMBO J [1]
  • J.THROMB.HAEMOST. [1]
  • MOL MICROBIOL [1]
  • NAT MICROBIOL [1]
  • PLANT COMMUN. [1]
  • PROTEIN CELL [1]
  • RES SQ [1]

Software

  • RELION [30]
  • CRYOSPARC [16]
  • CHIMERA [3]
  • CHIMERA, FLEX-EM, MODELLER, TEMPY [2]
  • EMAN2 [2]
  • IMAGIC, SPIDER [2]
  • PHENIX [2]
  • WARP [2]
  • CISTEM [1]
  • CTFFIND [1]
  • CTFFIND3, RELION [1]
  • EMAN [1]
  • EMAN1 [1]
  • EMAN2, SPIDER, BESPOKE-2D-ALIGNMENT, BESPOKE-X-AND-Y-SHIFTING [1]
  • FREALIGN [1]
  • GCTF [1]
  • SPIDER [1]

Microscope

  • FEI TITAN KRIOS [99]
  • TFS KRIOS [10]
  • FEI TALOS ARCTICA [7]
  • FEI POLARA 300 [5]
  • FEI TITAN [4]
  • FEI/PHILIPS CM120T [2]
  • FEI TECNAI 12 [1]
  • FEI TECNAI 20 [1]
  • FEI TECNAI ARCTICA [1]
  • JEOL 3200FSC [1]
  • JEOL CRYO ARM 300 [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [130]
  • LAB6 [2]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [42]
  • GATAN K3 6K X 4K [34]
  • GATAN K3 BIOQUANTUM 6K X 4K [20]
  • FEI FALCON IV 4K X 4K [10]
  • GATAN K2 QUANTUM 4K X 4K [6]
  • FEI FALCON III 4K X 4K [5]
  • GATAN K2 BASE 4K X 4K [4]
  • FEI FALCON II 4K X 4K [3]
  • GATAN ULTRASCAN 4000 4K X 4K [2]
  • TVIPS TEMCAM-F224 2K X 2K [2]
  • FEI EAGLE 4K X 4K [1]
  • FEI FALCON I 4K X 4K [1]
  • KODAK SO-163 FILM [1]
  • OTHER [1]
  • TFS FALCON 4I 4K X 4K [1]

External links

  • AlphaFold DB [122]
  • EMPIAR [12]