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Current Database

  • EMDB [552]

Current status

  • REL [552]

Sample type

  • Protein [466]
  • Complex [269]
  • Ligand [197]
  • Sample [187]
  • Virus [166]
  • RNA [55]
  • Cellular component [42]
  • DNA [18]
  • Cell [3]

Organism

  • Homo sapiens [108]
  • Synthetic construct [48]
  • Adeno-associated virus [44]
  • Saccharomyces cerevisiae [43]
  • Escherichia coli [38]
  • Parengyodontium album [22]
  • Bos taurus [16]
  • Mus musculus [15]
  • Oryctolagus cuniculus [12]
  • Triticum aestivum [9]
  • Rattus norvegicus [8]
  • Adeno-associated dependoparvovirus a [8]
  • Hepacivirus c [7]
  • Sus scrofa [7]
  • Enterobacteria phage t4 [6]
  • Adeno-associated dependoparvovirus a [6]
  • Squamate dependoparvovirus 1 [6]
  • Saccharomyces cerevisiae [6]
  • Bufavirus-1 [5]
  • Adeno-associated dependoparvovirus a [5]
  • Enterovirus d [5]
  • Triticum sp. [5]
  • Primate bocaparvovirus 2 [5]
  • Canis lupus [5]
  • Human mastadenovirus c [4]
  • Bacillus thuringiensis [4]
  • (no species) [4]
  • Adeno-associated dependoparvovirus a [4]
  • Thermus thermophilus [4]
  • Drosophila melanogaster [4]
  • Unidentified adenovirus [3]
  • Bacillus phage phi29 [3]
  • Primate erythroparvovirus 1 [3]
  • Bacillus subtilis [3]
  • Methylococcus capsulatus [3]
  • Myxococcus xanthus [3]
  • Solenopsis invicta-associated densovirus [3]
  • Sulfolobus acidocaldarius [3]
  • Kelp fly virus [3]
  • Rodent protoparvovirus 1 [3]
  • Methanococcus maripaludis [3]
  • Dictyostelium discoideum [3]
  • Klebsiella pneumoniae [3]
  • Primate bocaparvovirus 1 [3]
  • Tick-borne encephalitis virus [3]
  • Torpedo marmorata [3]
  • Adeno-associated dependoparvovirus b [3]
  • Gallus gallus [3]
  • Hepatitis b virus [2]
  • Protoparvovirus rodent1 [2]
  • Maize streak virus [2]
  • (no species) [2]
  • Dengue virus [2]
  • Cypovirus 1 [2]
  • Avian coronavirus [2]
  • Escherichia coli [2]
  • Streptococcus pneumoniae [2]
  • Human blood metagenome [2]
  • Adeno-associated dependoparvovirus a [2]
  • Escherichia virus su10 [2]
  • Prevotella copri [2]
  • Methanocaldococcus jannaschii [2]
  • Adeno-associated dependoparvovirus a [2]
  • Adeno-associated dependoparvovirus a [2]
  • Penaeus monodon metallodensovirus [2]
  • Severe acute respiratory syndrome coronavirus [2]
  • Human mastadenovirus c [2]
  • Carnivore amdoparvovirus 1 [2]
  • Israeli acute paralysis virus [2]
  • Euglena gracilis [2]
  • Thermococcus kodakarensis [2]
  • Avian dependoparvovirus 1 [2]
  • Bluetongue virus [2]
  • Slow bee paralysis virus [2]
  • Adeno-associated dependoparvovirus a [2]
  • Trypanosoma brucei [2]
  • Shigella flexneri [2]
  • Chiropteran dependoparvovirus 1 [2]
  • Ovis aries [2]
  • Human herpesvirus 1 [1]
  • Human cytomegalovirus [1]
  • Bacillus phage sf6 [1]
  • Spiromicrovirus spv4 [1]
  • Methylotuvimicrobium alcaliphilum [1]
  • Rotavirus a [1]
  • Sindbis virus [1]
  • Mycobacterium xenopi [1]
  • Haloarcula hispanica icosahedral virus 2 [1]
  • Acidipropionibacterium acidipropionici [1]
  • Coxsackievirus [1]
  • Enterovirus c [1]
  • Bufavirus-2 [1]
  • Tobacco mosaic virus [1]
  • Neisseria meningitidis [1]
  • Dengue virus [1]
  • Staphylococcus epidermidis [1]
  • Enterococcus faecalis [1]
  • Pyrobaculum aerophilum [1]
  • Bufavirus-3 [1]
  • Bacillus cereus [1]

EM Method

  • Single-particle [414]
  • Electron Crystallography [112]
  • Helical reconstruction [26]

Resolution

  • < 2Å [56]
  • ≥ 2Å and < 3Å [141]
  • ≥ 3Å and < 4Å [131]
  • ≥ 4Å and < 5Å [19]
  • ≥ 5Å and < 6Å [11]
  • ≥ 6Å and < 8Å [46]
  • ≥ 8Å and < 12Å [49]
  • ≥ 12Å and < 16Å [28]
  • ≥ 16Å and < 20Å [19]
  • ≥ 20Å and < 30Å [19]
  • ≥ 30Å [9]

Model molecular weight

  • 0-50 kDa [78]
  • 50-100 kDa [17]
  • 100-250 kDa [65]
  • 250-500 kDa [58]
  • 500-1000 kDa [27]
  • 1-2 MDa [34]
  • 2-5 MDa [107]
  • 5-10 MDa [21]
  • > 10 MDa [9]

Release Date

  • 2026 [2]
  • 2025 [48]
  • 2024 [39]
  • 2023 [27]
  • 2022 [53]
  • 2021 [47]
  • 2020 [27]
  • 2019 [32]
  • 2018 [60]
  • 2017 [13]
  • 2016 [18]
  • 2015 [20]
  • 2014 [14]
  • 2013 [10]
  • 2012 [12]
  • 2011 [15]
  • 2010 [26]
  • 2009 [20]
  • 2008 [8]
  • 2007 [19]
  • 2006 [20]
  • 2005 [13]
  • 2004 [9]

Author by name

  • Mckenna R [107]
  • Chipman P [101]
  • Mietzsch M [91]
  • Gonen T [82]
  • Hattne J [69]
  • Agbandje-mckenna M [56]
  • Martynowycz MW [54]
  • Rodriguez JA [52]
  • Beckmann R [47]
  • Shi D [41]
  • Berninghausen O [39]
  • Hsi J [37]
  • Mielke T [37]
  • Sawaya MR [32]
  • Bhattacharya N [30]
  • Cascio D [29]
  • Becker T [27]
  • Zee CT [27]
  • Gallagher-jones M [25]
  • Glynn C [25]
  • Huiskonen JT [25]
  • Sousa D [24]
  • Armache JP [22]
  • Eisenberg DS [22]
  • Gilbert RJ [22]
  • Nelson AR [22]
  • Zachary J [22]
  • Alexander IE [21]
  • Farrar MA [21]
  • Ghanem M [21]
  • Huang AM [21]
  • Khandekar N [21]
  • Logan GJ [21]
  • Potts L [21]
  • Smith NJ [21]
  • Gilbert RJC [20]
  • Saibil HR [20]
  • Stuart DI [20]
  • Wilson DN [20]
  • Soderlund-venermo M [19]
  • Chipman PR [18]
  • Hull JA [18]
  • Rossmann MG [18]
  • Bennett A [17]
  • Reyes FE [17]
  • Amunts A [16]
  • Fujiyoshi Y [16]
  • Itoh Y [16]
  • Bhushan S [15]
  • Fuzik T [15]
  • Plevka P [15]
  • Yu JC [15]
  • Anger AM [13]
  • Clare DK [13]
  • Jarasch A [13]
  • Khawaja A [13]
  • Rorbach J [13]
  • Tani K [13]
  • Zhang X [13]
  • Armache J-P [12]
  • Atanassov I [12]
  • Boyer DR [12]
  • Cipullo M [12]
  • Laptev I [12]
  • Luo M [12]
  • Penzes JJ [12]
  • Rodriguez J [12]
  • Sergiev P [12]
  • Tijssen P [12]
  • Bennett AD [11]
  • Eisenberg D [11]
  • Fulton TJ [11]
  • Huang R [11]
  • Jensen GJ [11]
  • Jones CG [11]
  • Nelson HM [11]
  • Orlova EV [11]
  • Stoltz BM [11]
  • Wang J [11]
  • Zeher A [11]
  • Zhang Y [11]
  • Zhao W [11]
  • Fulton T [10]
  • Hendrickson WA [10]
  • Jimenez Ybargollin A [10]
  • Schulten K [10]
  • Seidler P [10]
  • Spahn CMT [10]
  • Abe K [9]
  • Beatrix B [9]
  • Gumbart J [9]
  • Schoehn G [9]
  • Thomm M [9]
  • Villa E [9]
  • De La Cruz Mj [9]
  • Andreas MP [8]
  • Bennett AB [8]
  • Calero G [8]
  • Chen S [8]
  • Daneshparvar N [8]

Author by ORCID

  • Chipman P [97]
  • Mckenna R [83]
  • Mietzsch M [76]
  • Hattne J [69]
  • Martynowycz MW [54]
  • Sawaya MR [31]
  • Hsi J [28]
  • Gallagher-jones M [25]
  • Huiskonen JT [23]
  • Armache JP [22]
  • Logan GJ [21]
  • Farrar MA [21]
  • Alexander IE [21]
  • Agbandje-mckenna M [21]
  • Smith NJ [21]
  • Potts L [21]
  • Stuart DI [19]
  • Wilson DN [18]
  • Chipman PR [17]
  • Itoh Y [16]
  • Fuzik T [15]
  • Bhushan S [15]
  • Plevka P [15]
  • Rorbach J [13]
  • Amunts A [13]
  • Khawaja A [13]
  • Tani K [13]
  • Atanassov I [12]
  • Sergiev P [12]
  • Gilbert RJ [12]
  • Laptev I [12]
  • Clare DK [12]
  • Eisenberg DS [12]
  • Penzes JJ [11]
  • Fujiyoshi Y [11]
  • Fulton TJ [11]
  • Orlova EV [11]
  • Jimenez Ybargollin A [10]
  • Soderlund-venermo M [10]
  • Schoehn G [9]
  • De La Cruz Mj [9]
  • Gonen T [9]
  • Villa E [9]
  • Loerke J [8]
  • Yang T [8]
  • Daneshparvar N [8]
  • Zhang Y [8]
  • Kittredge A [8]
  • Owji AP [8]
  • Hendrickson WA [8]
  • Fucini P [8]
  • Abe K [8]
  • Bennett A [8]
  • Giessen TW [7]
  • Sonnen AF [7]
  • Burger J [7]
  • Muller CW [7]
  • Heilbronn R [6]
  • Haslbeck M [6]
  • Robinson CV [6]
  • Rodriguez JA [6]
  • Kostyuchenko VA [6]
  • Mudrick HE [6]
  • Bhandari J [6]
  • Franzmann TM [6]
  • Lu SC [6]
  • Von Der Haar T [6]
  • Zeher A [6]
  • Barry MA [6]
  • Buchner J [6]
  • Hemsath JR [6]
  • Funes S [6]
  • Bakkes PJ [6]
  • Dabrowski M [6]
  • Reddy VS [6]
  • Andres FGM [6]
  • Scheerer P [5]
  • Vorlander MK [5]
  • Hagen WJH [5]
  • Koo CW [5]
  • Connell S [5]
  • Amos LA [5]
  • Rosenzweig AC [5]
  • Chapman MS [5]
  • Andreas MP [5]
  • Puno MR [5]
  • Sprink T [5]
  • He Y [5]
  • Weick EM [5]
  • Froehlich T [5]
  • Lu J [5]
  • Pridal A [5]
  • Tucci FJ [5]
  • Hilal T [5]
  • Moravcova J [5]
  • Lima CD [5]
  • Wang J [5]
  • Pool MR [5]
  • Zinder JC [5]
  • Beatrix B [4]

Journal

  • NAT COMMUN [67]
  • J VIROL [57]
  • STRUCTURE [55]
  • NATURE [53]
  • PNAS [34]
  • NAT STRUCT MOL BIOL [31]
  • VIRUSES [31]
  • MOL CELL [21]
  • CELL [20]
  • TO BE PUBLISHED [20]
  • SCIENCE [18]
  • EMBO J [17]
  • ELIFE [14]
  • J MOL BIOL [12]
  • ACS CENT SCI [11]
  • J BIOL CHEM [8]
  • NAT METHODS [8]
  • J STRUCT BIOL [7]
  • NUCLEIC ACIDS RES [7]
  • SCI REP [6]
  • J AM CHEM SOC [5]
  • BIORXIV [4]
  • VIROLOGY [4]
  • ACTA CRYSTALLOGR D STRUCT BIOL [3]
  • CELL REP [3]
  • COMMUN BIOL [3]
  • J STRUCT BIOL X [3]
  • MOL THER METHODS CLIN DEV [3]
  • ACS NANO [2]
  • EXP.MOL.MED. [2]
  • IUCRJ [2]
  • MICROSCOPY [2]
  • NAT CHEM BIOL [2]
  • PLOS BIOL [2]
  • SCI ADV [2]
  • ADV SCI [1]
  • BIOCHIM BIOPHYS ACTA [1]
  • BIOMACROMOLECULES [1]
  • BLOOD [1]
  • CELL HOST MICROBE [1]
  • CELL RES [1]
  • EMBO REP [1]
  • J APPL CRYSTALLOGR [1]
  • LIFE SCI ALLIANCE [1]
  • MEDCOMM (2020) [1]
  • MICROORGANISMS [1]
  • MOL MICROBIOL [1]
  • MOL THER [1]
  • NAT CHEM [1]
  • PLOS PATHOG [1]
  • RNA [1]

Software

  • RELION [81]
  • SPIDER [64]
  • CRYOSPARC [49]
  • CISTEM [41]
  • MRC [22]
  • URO [22]
  • MOLREP [17]
  • AIMLESS [16]
  • POINTLESS [16]
  • AUTO3DEM [14]
  • PHENIX [13]
  • GCTF [12]
  • GAP [11]
  • FREALIGN [10]
  • IMAGIC [10]
  • CHIMERA [9]
  • EMAN [7]
  • SITUS [7]
  • UCSF CHIMERA [7]
  • EMFIT [6]
  • PHASER [6]
  • SHELXD [6]
  • CHIMERA, COOT, MDFF [5]
  • EMPFT, POR, P3DR [5]
  • IMAGIC, EMAN, FREALIGN, SPIDER, GAP [5]
  • SPIDER, IMAGIC, GAP, CNS, XPLOR [5]
  • XSCALE [5]
  • CTFFIND [4]
  • MDFF [4]
  • SCALEPACK [4]
  • SPIDER AND GAP [4]
  • SPIDER, SIGNATURE, MAPPOS [4]
  • IMAGIC V [3]
  • PFT EM3DR [3]
  • PHOELIX [3]
  • SPIDER, SPARX [3]
  • COOT [2]
  • DIREX [2]
  • EMPFT, EM3DR [2]
  • FREALIGN, UPPSALA_PACKAGE [2]
  • IMAGIC, FREALIGN AND SPIDER [2]
  • MOLECULAR DYNAMICS BASED FLEXIBLE FITTING MDFF [2]
  • MRC, AND, OWN, PROGRAMS [2]
  • REFMAC [2]
  • SPIDER, IMAGIC [2]
  • SPIDER, XMIPP [2]
  • XDS [2]
  • 2DX [1]
  • BUSTER-TNT [1]
  • CCP4 [1]
  • CHIMERA AND COOT [1]
  • CHIMERA, COOT [1]
  • CNS [1]
  • CRYOLO [1]
  • ELITE3D, FREALIGN [1]
  • EM3DR [1]
  • EMBL ICOSAHEDRAL [1]
  • EMFIT SR5 [1]
  • EOS [1]
  • FLEX-EM [1]
  • FOLDHUNTER AND HOMEMADE SOFTWARE [1]
  • GROMACS [1]
  • HELICON [1]
  • IHRSR [1]
  • IMAGE2000 [1]
  • IMAGIC, FREALIGN, SPIDER, GAP [1]
  • IMAGIC-5, SPIDER [1]
  • IN-HOUSE SOFTWARE BASED ON MRC SYSTEM [1]
  • MOD-EM AND FLEX-EM [1]
  • MRC AND SPIDER [1]
  • MRC, CCP4, HOMEMADE [1]
  • O [1]
  • O, NAMD, EOS [1]
  • PARALLELIZED EMPFT, EM3DR [1]
  • PFT P3DR POR [1]
  • PURDUE SUITE [1]
  • SITUS AND EMFIT [1]
  • SITUS, COLORES [1]
  • SITUS, URO [1]
  • SPIDER AND IMAGIC [1]
  • SPIDER AND MRC [1]
  • SPIDER IMAGIC [1]
  • SPIDER-LIKE [1]
  • STAR, FISH, SPIDER [1]
  • STARFISH, SPIDER [1]
  • URO SITUS [1]

Microscope

  • FEI TITAN KRIOS [228]
  • FEI TECNAI F20 [82]
  • TFS KRIOS [50]
  • FEI TALOS ARCTICA [37]
  • FEI POLARA 300 [27]
  • FEI/PHILIPS CM200FEG [27]
  • FEI TECNAI F30 [17]
  • FEI/PHILIPS CM300FEG/T [13]
  • JEOL KYOTO-3000SFF [13]
  • FEI TECNAI 12 [12]
  • FEI TECNAI 20 [6]
  • FEI/PHILIPS CM200T [6]
  • JEOL 2010F [5]
  • JEOL 3000SFF [5]
  • JEOL 2100F [4]
  • FEI TECNAI ARCTICA [3]
  • FEI/PHILIPS CM200FEG/UT [3]
  • JEOL CRYO ARM 300 [3]
  • TFS GLACIOS [3]
  • FEI TITAN [2]
  • FEI/PHILIPS CM120T [2]
  • FEI/PHILIPS CM300FEG/ST [1]
  • HITACHI EF2000 [1]
  • JEOL 1200EXII [1]
  • JEOL 4000EX [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [516]
  • LAB6 [15]
  • OTHER [12]
  • TUNGSTEN HAIRPIN [9]

Film or detector model

  • KODAK SO-163 FILM [124]
  • GATAN K2 SUMMIT 4K X 4K [97]
  • TVIPS TEMCAM-F416 4K X 4K [67]
  • GATAN K3 6K X 4K [59]
  • FEI FALCON IV 4K X 4K [35]
  • FEI CETA 4K X 4K [29]
  • GATAN K3 BIOQUANTUM 6K X 4K [24]
  • FEI FALCON II 4K X 4K [20]
  • DIRECT ELECTRON DE-64 8K X 8K [12]
  • FEI FALCON III 4K X 4K [12]
  • DIRECT ELECTRON DE-20 5K X 3K [10]
  • GATAN ULTRASCAN 4000 4K X 4K [9]
  • GENERIC GATAN 4K X 4K [8]
  • FEI EAGLE 4K X 4K [7]
  • GATAN K3 BIOCONTINUUM 6K X 4K [6]
  • GATAN K2 4K X 4K [5]
  • TVIPS TEMCAM-F415 4K X 4K [5]
  • GATAN K2 QUANTUM 4K X 4K [4]
  • FEI EAGLE 2K X 2K [3]
  • DIRECT ELECTRON APOLLO 4K X 4K [2]
  • DIRECT ELECTRON DE-12 4K X 3K [2]
  • GENERIC CCD [1]
  • GENERIC CCD 2K X 2K [1]
  • GENERIC FILM [1]
  • GENERIC GATAN [1]
  • TFS FALCON 4I 4K X 4K [1]

External links

  • PDB [416]
  • UniProt [349]
  • PDBe-Kb [328]
  • InterPro [258]
  • Gene Ontology [251]
  • AlphaFold DB [236]
  • ChEBI [184]
  • ChEMBL [165]
  • DrugBank [164]
  • Pfam [125]
  • Complex Portal [60]
  • SCOP2 [24]
  • CATH [20]
  • EMPIAR [20]
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EMD-48757
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3D View
CryoEM structure of GluK2 bound to glutamate in the deep desensitized state 3
Release date: Feb. 4, 2026
Resolution: 3.83 Å
EM Method: Single-particle
Fitted PDBs: 9mzi

Chang PZ, Nami T

To Be Published

EMD-52507
Download Map
3D View
PsaI Nterm region focused map
Release date: Jan. 21, 2026
Resolution: 1.94 Å
EM Method: Single-particle

Yuan X, Qian P, Sobotka R, Naschberger A

To Be Published

EMD-47736
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3D View
CNS-11g alone fibril
Release date: Nov. 12, 2025
Resolution: 3.5 Å
EM Method: Helical reconstruction

Lu J, Sawaya MR, Cheng XY, Murrali MG, Ge P, Jiang YX, Cascio D, Lutter L, Boyer DR, Williams CK, Shino M, Feigon J, Chaturvedi S, Alexandrova A, Eisenberg DS

To Be Published

EMD-49739
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The AAVpo.6 capsid
Release date: Oct. 8, 2025
Resolution: 1.77 Å
EM Method: Single-particle
Fitted PDBs: 9nrp
Q-score: 0.803

Nelson A, Mietzsch M, Hsi J, Eby J, Chipman P, McKenna R

Viruses (2025) 17 [ Pubmed: 41012686 DOI: doi:10.3390/v17091260 ]

EMD-72396
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3D View
CryoEM structure of alpha-synuclein fibril induced by psychosine
Release date: Oct. 8, 2025
Resolution: 2.72 Å
EM Method: Helical reconstruction
Fitted PDBs: 9y0s
Q-score: 0.56

Jenkins RA, Wu S, Fujimura G, Heredia A, Flowers CW, Sun C, Sawaya MR, Loo JA, Rodriguez JA

bioRxiv (2025) [ DOI: doi:10.1101/2025.09.12.675751 Pubmed: 41000844 ]

EMD-54690
Composite map
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Ternary PROTAC-mediated complex of BRD4-BD1/CRBN/DDB1 and JQ1-AcQ bifunctional degrader
Release date: Oct. 1, 2025
Resolution: 2.55 Å
EM Method: Single-particle
Fitted PDBs: 9saf
Q-score: 0.567

Zhu Q, Fischer G, Cheng SS, Payne NC, Peter D, Mody AC, Arce-Solano S, Shen D, Lin Z, Mazitschek R, Kessler D, Woo CM

J Am Chem Soc (2025) 147 pp. 34672-34680 [ DOI: doi:10.1021/jacs.5c09843 Pubmed: 40937862 ]

EMD-43977
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geranine G-induced 2N4R tau filaments
Release date: Sept. 10, 2025
Resolution: 3.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 9axz
Q-score: 0.555

Malyshka D, Kuret J

To Be Published

EMD-52170
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Structure of the Ist2 TMEM16 homology domain in the detergent GDN
Release date: Sept. 3, 2025
Resolution: 2.84 Å
EM Method: Single-particle
Fitted PDBs: 9hhe
Q-score: 0.553

Arndt M, Schweri A, Dutzler R

Nat Struct Mol Biol (2025) 32 pp. 2219-2230 [ Pubmed: 40866577 DOI: doi:10.1038/s41594-025-01660-z ]

EMD-49228
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H-1 Parvovirus VLP - Glycan s Lex 2
Release date: July 23, 2025
Resolution: 2.57 Å
EM Method: Single-particle
Fitted PDBs: 9nbg
Q-score: 0.435

Busuttil K, Pittman N, Zachary J, Halder S, Geilen L, Singh A, Misseldine A, Kaplonek P, Chipman P, Heimburg-Molinaro J, Seeberger PH, Mietzsch M, Bennett AD, McKenna R

J Virol (2025) 99 pp. e0029725-e0029725 [ Pubmed: 40704809 DOI: doi:10.1128/jvi.00297-25 ]

EMD-47460
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Raw data
EMPIAR-12448
Complex of Human MIRO1 and TRAK1 Binding Site-2 L570-R613
Release date: July 9, 2025
Resolution: 3.57 Å
EM Method: Single-particle
Fitted PDBs: 9e2p
Q-score: 0.466

Ravitch EE, Baltrusaitis EE, Perez TP, Barrie KR, Fenton AR, Holbaur ELF, Dominguez R

To Be Published

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Current Database

  • EMDB [552]

Current status

  • REL [552]

Sample type

  • Protein [466]
  • Complex [269]
  • Ligand [197]
  • Sample [187]
  • Virus [166]
  • RNA [55]
  • Cellular component [42]
  • DNA [18]
  • Cell [3]

Organism

  • Homo sapiens [108]
  • Synthetic construct [48]
  • Adeno-associated virus [44]
  • Saccharomyces cerevisiae [43]
  • Escherichia coli [38]
  • Parengyodontium album [22]
  • Bos taurus [16]
  • Mus musculus [15]
  • Oryctolagus cuniculus [12]
  • Triticum aestivum [9]
  • Rattus norvegicus [8]
  • Adeno-associated dependoparvovirus a [8]
  • Hepacivirus c [7]
  • Sus scrofa [7]
  • Enterobacteria phage t4 [6]
  • Adeno-associated dependoparvovirus a [6]
  • Squamate dependoparvovirus 1 [6]
  • Saccharomyces cerevisiae [6]
  • Bufavirus-1 [5]
  • Adeno-associated dependoparvovirus a [5]
  • Enterovirus d [5]
  • Triticum sp. [5]
  • Primate bocaparvovirus 2 [5]
  • Canis lupus [5]
  • Human mastadenovirus c [4]
  • Bacillus thuringiensis [4]
  • (no species) [4]
  • Adeno-associated dependoparvovirus a [4]
  • Thermus thermophilus [4]
  • Drosophila melanogaster [4]
  • Unidentified adenovirus [3]
  • Bacillus phage phi29 [3]
  • Primate erythroparvovirus 1 [3]
  • Bacillus subtilis [3]
  • Methylococcus capsulatus [3]
  • Myxococcus xanthus [3]
  • Solenopsis invicta-associated densovirus [3]
  • Sulfolobus acidocaldarius [3]
  • Kelp fly virus [3]
  • Rodent protoparvovirus 1 [3]
  • Methanococcus maripaludis [3]
  • Dictyostelium discoideum [3]
  • Klebsiella pneumoniae [3]
  • Primate bocaparvovirus 1 [3]
  • Tick-borne encephalitis virus [3]
  • Torpedo marmorata [3]
  • Adeno-associated dependoparvovirus b [3]
  • Gallus gallus [3]
  • Hepatitis b virus [2]
  • Protoparvovirus rodent1 [2]
  • Maize streak virus [2]
  • (no species) [2]
  • Dengue virus [2]
  • Cypovirus 1 [2]
  • Avian coronavirus [2]
  • Escherichia coli [2]
  • Streptococcus pneumoniae [2]
  • Human blood metagenome [2]
  • Adeno-associated dependoparvovirus a [2]
  • Escherichia virus su10 [2]
  • Prevotella copri [2]
  • Methanocaldococcus jannaschii [2]
  • Adeno-associated dependoparvovirus a [2]
  • Adeno-associated dependoparvovirus a [2]
  • Penaeus monodon metallodensovirus [2]
  • Severe acute respiratory syndrome coronavirus [2]
  • Human mastadenovirus c [2]
  • Carnivore amdoparvovirus 1 [2]
  • Israeli acute paralysis virus [2]
  • Euglena gracilis [2]
  • Thermococcus kodakarensis [2]
  • Avian dependoparvovirus 1 [2]
  • Bluetongue virus [2]
  • Slow bee paralysis virus [2]
  • Adeno-associated dependoparvovirus a [2]
  • Trypanosoma brucei [2]
  • Shigella flexneri [2]
  • Chiropteran dependoparvovirus 1 [2]
  • Ovis aries [2]
  • Human herpesvirus 1 [1]
  • Human cytomegalovirus [1]
  • Bacillus phage sf6 [1]
  • Spiromicrovirus spv4 [1]
  • Methylotuvimicrobium alcaliphilum [1]
  • Rotavirus a [1]
  • Sindbis virus [1]
  • Mycobacterium xenopi [1]
  • Haloarcula hispanica icosahedral virus 2 [1]
  • Acidipropionibacterium acidipropionici [1]
  • Coxsackievirus [1]
  • Enterovirus c [1]
  • Bufavirus-2 [1]
  • Tobacco mosaic virus [1]
  • Neisseria meningitidis [1]
  • Dengue virus [1]
  • Staphylococcus epidermidis [1]
  • Enterococcus faecalis [1]
  • Pyrobaculum aerophilum [1]
  • Bufavirus-3 [1]
  • Bacillus cereus [1]

EM Method

  • Single-particle [414]
  • Electron Crystallography [112]
  • Helical reconstruction [26]

Resolution

  • < 2Å [56]
  • ≥ 2Å and < 3Å [141]
  • ≥ 3Å and < 4Å [131]
  • ≥ 4Å and < 5Å [19]
  • ≥ 5Å and < 6Å [11]
  • ≥ 6Å and < 8Å [46]
  • ≥ 8Å and < 12Å [49]
  • ≥ 12Å and < 16Å [28]
  • ≥ 16Å and < 20Å [19]
  • ≥ 20Å and < 30Å [19]
  • ≥ 30Å [9]

Model molecular weight

  • 0-50 kDa [78]
  • 50-100 kDa [17]
  • 100-250 kDa [65]
  • 250-500 kDa [58]
  • 500-1000 kDa [27]
  • 1-2 MDa [34]
  • 2-5 MDa [107]
  • 5-10 MDa [21]
  • > 10 MDa [9]

Release Date

  • 2026 [2]
  • 2025 [48]
  • 2024 [39]
  • 2023 [27]
  • 2022 [53]
  • 2021 [47]
  • 2020 [27]
  • 2019 [32]
  • 2018 [60]
  • 2017 [13]
  • 2016 [18]
  • 2015 [20]
  • 2014 [14]
  • 2013 [10]
  • 2012 [12]
  • 2011 [15]
  • 2010 [26]
  • 2009 [20]
  • 2008 [8]
  • 2007 [19]
  • 2006 [20]
  • 2005 [13]
  • 2004 [9]

Author by name

  • Mckenna R [107]
  • Chipman P [101]
  • Mietzsch M [91]
  • Gonen T [82]
  • Hattne J [69]
  • Agbandje-mckenna M [56]
  • Martynowycz MW [54]
  • Rodriguez JA [52]
  • Beckmann R [47]
  • Shi D [41]
  • Berninghausen O [39]
  • Hsi J [37]
  • Mielke T [37]
  • Sawaya MR [32]
  • Bhattacharya N [30]
  • Cascio D [29]
  • Becker T [27]
  • Zee CT [27]
  • Gallagher-jones M [25]
  • Glynn C [25]
  • Huiskonen JT [25]
  • Sousa D [24]
  • Armache JP [22]
  • Eisenberg DS [22]
  • Gilbert RJ [22]
  • Nelson AR [22]
  • Zachary J [22]
  • Alexander IE [21]
  • Farrar MA [21]
  • Ghanem M [21]
  • Huang AM [21]
  • Khandekar N [21]
  • Logan GJ [21]
  • Potts L [21]
  • Smith NJ [21]
  • Gilbert RJC [20]
  • Saibil HR [20]
  • Stuart DI [20]
  • Wilson DN [20]
  • Soderlund-venermo M [19]
  • Chipman PR [18]
  • Hull JA [18]
  • Rossmann MG [18]
  • Bennett A [17]
  • Reyes FE [17]
  • Amunts A [16]
  • Fujiyoshi Y [16]
  • Itoh Y [16]
  • Bhushan S [15]
  • Fuzik T [15]
  • Plevka P [15]
  • Yu JC [15]
  • Anger AM [13]
  • Clare DK [13]
  • Jarasch A [13]
  • Khawaja A [13]
  • Rorbach J [13]
  • Tani K [13]
  • Zhang X [13]
  • Armache J-P [12]
  • Atanassov I [12]
  • Boyer DR [12]
  • Cipullo M [12]
  • Laptev I [12]
  • Luo M [12]
  • Penzes JJ [12]
  • Rodriguez J [12]
  • Sergiev P [12]
  • Tijssen P [12]
  • Bennett AD [11]
  • Eisenberg D [11]
  • Fulton TJ [11]
  • Huang R [11]
  • Jensen GJ [11]
  • Jones CG [11]
  • Nelson HM [11]
  • Orlova EV [11]
  • Stoltz BM [11]
  • Wang J [11]
  • Zeher A [11]
  • Zhang Y [11]
  • Zhao W [11]
  • Fulton T [10]
  • Hendrickson WA [10]
  • Jimenez Ybargollin A [10]
  • Schulten K [10]
  • Seidler P [10]
  • Spahn CMT [10]
  • Abe K [9]
  • Beatrix B [9]
  • Gumbart J [9]
  • Schoehn G [9]
  • Thomm M [9]
  • Villa E [9]
  • De La Cruz Mj [9]
  • Andreas MP [8]
  • Bennett AB [8]
  • Calero G [8]
  • Chen S [8]
  • Daneshparvar N [8]

Author by ORCID

  • Chipman P [97]
  • Mckenna R [83]
  • Mietzsch M [76]
  • Hattne J [69]
  • Martynowycz MW [54]
  • Sawaya MR [31]
  • Hsi J [28]
  • Gallagher-jones M [25]
  • Huiskonen JT [23]
  • Armache JP [22]
  • Logan GJ [21]
  • Farrar MA [21]
  • Alexander IE [21]
  • Agbandje-mckenna M [21]
  • Smith NJ [21]
  • Potts L [21]
  • Stuart DI [19]
  • Wilson DN [18]
  • Chipman PR [17]
  • Itoh Y [16]
  • Fuzik T [15]
  • Bhushan S [15]
  • Plevka P [15]
  • Rorbach J [13]
  • Amunts A [13]
  • Khawaja A [13]
  • Tani K [13]
  • Atanassov I [12]
  • Sergiev P [12]
  • Gilbert RJ [12]
  • Laptev I [12]
  • Clare DK [12]
  • Eisenberg DS [12]
  • Penzes JJ [11]
  • Fujiyoshi Y [11]
  • Fulton TJ [11]
  • Orlova EV [11]
  • Jimenez Ybargollin A [10]
  • Soderlund-venermo M [10]
  • Schoehn G [9]
  • De La Cruz Mj [9]
  • Gonen T [9]
  • Villa E [9]
  • Loerke J [8]
  • Yang T [8]
  • Daneshparvar N [8]
  • Zhang Y [8]
  • Kittredge A [8]
  • Owji AP [8]
  • Hendrickson WA [8]
  • Fucini P [8]
  • Abe K [8]
  • Bennett A [8]
  • Giessen TW [7]
  • Sonnen AF [7]
  • Burger J [7]
  • Muller CW [7]
  • Heilbronn R [6]
  • Haslbeck M [6]
  • Robinson CV [6]
  • Rodriguez JA [6]
  • Kostyuchenko VA [6]
  • Mudrick HE [6]
  • Bhandari J [6]
  • Franzmann TM [6]
  • Lu SC [6]
  • Von Der Haar T [6]
  • Zeher A [6]
  • Barry MA [6]
  • Buchner J [6]
  • Hemsath JR [6]
  • Funes S [6]
  • Bakkes PJ [6]
  • Dabrowski M [6]
  • Reddy VS [6]
  • Andres FGM [6]
  • Scheerer P [5]
  • Vorlander MK [5]
  • Hagen WJH [5]
  • Koo CW [5]
  • Connell S [5]
  • Amos LA [5]
  • Rosenzweig AC [5]
  • Chapman MS [5]
  • Andreas MP [5]
  • Puno MR [5]
  • Sprink T [5]
  • He Y [5]
  • Weick EM [5]
  • Froehlich T [5]
  • Lu J [5]
  • Pridal A [5]
  • Tucci FJ [5]
  • Hilal T [5]
  • Moravcova J [5]
  • Lima CD [5]
  • Wang J [5]
  • Pool MR [5]
  • Zinder JC [5]
  • Beatrix B [4]

Journal

  • NAT COMMUN [67]
  • J VIROL [57]
  • STRUCTURE [55]
  • NATURE [53]
  • PNAS [34]
  • NAT STRUCT MOL BIOL [31]
  • VIRUSES [31]
  • MOL CELL [21]
  • CELL [20]
  • TO BE PUBLISHED [20]
  • SCIENCE [18]
  • EMBO J [17]
  • ELIFE [14]
  • J MOL BIOL [12]
  • ACS CENT SCI [11]
  • J BIOL CHEM [8]
  • NAT METHODS [8]
  • J STRUCT BIOL [7]
  • NUCLEIC ACIDS RES [7]
  • SCI REP [6]
  • J AM CHEM SOC [5]
  • BIORXIV [4]
  • VIROLOGY [4]
  • ACTA CRYSTALLOGR D STRUCT BIOL [3]
  • CELL REP [3]
  • COMMUN BIOL [3]
  • J STRUCT BIOL X [3]
  • MOL THER METHODS CLIN DEV [3]
  • ACS NANO [2]
  • EXP.MOL.MED. [2]
  • IUCRJ [2]
  • MICROSCOPY [2]
  • NAT CHEM BIOL [2]
  • PLOS BIOL [2]
  • SCI ADV [2]
  • ADV SCI [1]
  • BIOCHIM BIOPHYS ACTA [1]
  • BIOMACROMOLECULES [1]
  • BLOOD [1]
  • CELL HOST MICROBE [1]
  • CELL RES [1]
  • EMBO REP [1]
  • J APPL CRYSTALLOGR [1]
  • LIFE SCI ALLIANCE [1]
  • MEDCOMM (2020) [1]
  • MICROORGANISMS [1]
  • MOL MICROBIOL [1]
  • MOL THER [1]
  • NAT CHEM [1]
  • PLOS PATHOG [1]
  • RNA [1]

Software

  • RELION [81]
  • SPIDER [64]
  • CRYOSPARC [49]
  • CISTEM [41]
  • MRC [22]
  • URO [22]
  • MOLREP [17]
  • AIMLESS [16]
  • POINTLESS [16]
  • AUTO3DEM [14]
  • PHENIX [13]
  • GCTF [12]
  • GAP [11]
  • FREALIGN [10]
  • IMAGIC [10]
  • CHIMERA [9]
  • EMAN [7]
  • SITUS [7]
  • UCSF CHIMERA [7]
  • EMFIT [6]
  • PHASER [6]
  • SHELXD [6]
  • CHIMERA, COOT, MDFF [5]
  • EMPFT, POR, P3DR [5]
  • IMAGIC, EMAN, FREALIGN, SPIDER, GAP [5]
  • SPIDER, IMAGIC, GAP, CNS, XPLOR [5]
  • XSCALE [5]
  • CTFFIND [4]
  • MDFF [4]
  • SCALEPACK [4]
  • SPIDER AND GAP [4]
  • SPIDER, SIGNATURE, MAPPOS [4]
  • IMAGIC V [3]
  • PFT EM3DR [3]
  • PHOELIX [3]
  • SPIDER, SPARX [3]
  • COOT [2]
  • DIREX [2]
  • EMPFT, EM3DR [2]
  • FREALIGN, UPPSALA_PACKAGE [2]
  • IMAGIC, FREALIGN AND SPIDER [2]
  • MOLECULAR DYNAMICS BASED FLEXIBLE FITTING MDFF [2]
  • MRC, AND, OWN, PROGRAMS [2]
  • REFMAC [2]
  • SPIDER, IMAGIC [2]
  • SPIDER, XMIPP [2]
  • XDS [2]
  • 2DX [1]
  • BUSTER-TNT [1]
  • CCP4 [1]
  • CHIMERA AND COOT [1]
  • CHIMERA, COOT [1]
  • CNS [1]
  • CRYOLO [1]
  • ELITE3D, FREALIGN [1]
  • EM3DR [1]
  • EMBL ICOSAHEDRAL [1]
  • EMFIT SR5 [1]
  • EOS [1]
  • FLEX-EM [1]
  • FOLDHUNTER AND HOMEMADE SOFTWARE [1]
  • GROMACS [1]
  • HELICON [1]
  • IHRSR [1]
  • IMAGE2000 [1]
  • IMAGIC, FREALIGN, SPIDER, GAP [1]
  • IMAGIC-5, SPIDER [1]
  • IN-HOUSE SOFTWARE BASED ON MRC SYSTEM [1]
  • MOD-EM AND FLEX-EM [1]
  • MRC AND SPIDER [1]
  • MRC, CCP4, HOMEMADE [1]
  • O [1]
  • O, NAMD, EOS [1]
  • PARALLELIZED EMPFT, EM3DR [1]
  • PFT P3DR POR [1]
  • PURDUE SUITE [1]
  • SITUS AND EMFIT [1]
  • SITUS, COLORES [1]
  • SITUS, URO [1]
  • SPIDER AND IMAGIC [1]
  • SPIDER AND MRC [1]
  • SPIDER IMAGIC [1]
  • SPIDER-LIKE [1]
  • STAR, FISH, SPIDER [1]
  • STARFISH, SPIDER [1]
  • URO SITUS [1]

Microscope

  • FEI TITAN KRIOS [228]
  • FEI TECNAI F20 [82]
  • TFS KRIOS [50]
  • FEI TALOS ARCTICA [37]
  • FEI POLARA 300 [27]
  • FEI/PHILIPS CM200FEG [27]
  • FEI TECNAI F30 [17]
  • FEI/PHILIPS CM300FEG/T [13]
  • JEOL KYOTO-3000SFF [13]
  • FEI TECNAI 12 [12]
  • FEI TECNAI 20 [6]
  • FEI/PHILIPS CM200T [6]
  • JEOL 2010F [5]
  • JEOL 3000SFF [5]
  • JEOL 2100F [4]
  • FEI TECNAI ARCTICA [3]
  • FEI/PHILIPS CM200FEG/UT [3]
  • JEOL CRYO ARM 300 [3]
  • TFS GLACIOS [3]
  • FEI TITAN [2]
  • FEI/PHILIPS CM120T [2]
  • FEI/PHILIPS CM300FEG/ST [1]
  • HITACHI EF2000 [1]
  • JEOL 1200EXII [1]
  • JEOL 4000EX [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [516]
  • LAB6 [15]
  • OTHER [12]
  • TUNGSTEN HAIRPIN [9]

Film or detector model

  • KODAK SO-163 FILM [124]
  • GATAN K2 SUMMIT 4K X 4K [97]
  • TVIPS TEMCAM-F416 4K X 4K [67]
  • GATAN K3 6K X 4K [59]
  • FEI FALCON IV 4K X 4K [35]
  • FEI CETA 4K X 4K [29]
  • GATAN K3 BIOQUANTUM 6K X 4K [24]
  • FEI FALCON II 4K X 4K [20]
  • DIRECT ELECTRON DE-64 8K X 8K [12]
  • FEI FALCON III 4K X 4K [12]
  • DIRECT ELECTRON DE-20 5K X 3K [10]
  • GATAN ULTRASCAN 4000 4K X 4K [9]
  • GENERIC GATAN 4K X 4K [8]
  • FEI EAGLE 4K X 4K [7]
  • GATAN K3 BIOCONTINUUM 6K X 4K [6]
  • GATAN K2 4K X 4K [5]
  • TVIPS TEMCAM-F415 4K X 4K [5]
  • GATAN K2 QUANTUM 4K X 4K [4]
  • FEI EAGLE 2K X 2K [3]
  • DIRECT ELECTRON APOLLO 4K X 4K [2]
  • DIRECT ELECTRON DE-12 4K X 3K [2]
  • GENERIC CCD [1]
  • GENERIC CCD 2K X 2K [1]
  • GENERIC FILM [1]
  • GENERIC GATAN [1]
  • TFS FALCON 4I 4K X 4K [1]

External links

  • PDB [416]
  • UniProt [349]
  • PDBe-Kb [328]
  • InterPro [258]
  • Gene Ontology [251]
  • AlphaFold DB [236]
  • ChEBI [184]
  • ChEMBL [165]
  • DrugBank [164]
  • Pfam [125]
  • Complex Portal [60]
  • SCOP2 [24]
  • CATH [20]
  • EMPIAR [20]