Filter By
Current Database
- EMDB [43659]
Current status
- REL [43659]
Sample type
- Complex [35281]
- Protein [29292]
- Ligand [16263]
- RNA [4114]
- Virus [3117]
- DNA [2870]
- Cellular component [2593]
- Sample [2385]
- Cell [1403]
- Tissue [295]
- Other [196]
- Em label [3]
Organism
- Homo sapiens [15272]
- Synthetic construct [3229]
- Mus musculus [2826]
- Escherichia coli [2409]
- Saccharomyces cerevisiae [2028]
- Severe acute respiratory syndrome coronavirus [1540]
- Rattus norvegicus [972]
- Escherichia coli [926]
- Bos taurus [898]
- Human immunodeficiency virus 1 [869]
- Oryctolagus cuniculus [834]
- Xenopus laevis [717]
- Saccharomyces cerevisiae [663]
- Sus scrofa [639]
- Arabidopsis thaliana [422]
- Lama glama [422]
- Macaca mulatta [332]
- Drosophila melanogaster [285]
- Chlamydomonas reinhardtii [263]
- Mycolicibacterium smegmatis [255]
- Influenza a virus [247]
- Mycobacterium tuberculosis [199]
- Gallus gallus [187]
- Tetrahymena thermophila [172]
- Enterobacteria phage m13 [164]
- Escherichia coli [164]
- Bacillus subtilis [163]
- Staphylococcus aureus [160]
- Pseudomonas aeruginosa [153]
- Thermus thermophilus [140]
- Danio rerio [138]
- Caenorhabditis elegans [133]
- Leishmania tarentolae [130]
- Chaetomium thermophilum [129]
- Vicugna pacos [125]
- Chaetomium thermophilum [116]
- Ovis aries [113]
- Saccharomyces cerevisiae [110]
- Bacillus subtilis [100]
- Escherichia virus t7 [99]
- Mycobacterium tuberculosis [99]
- Synechocystis sp. pcc 6803 [98]
- Plasmodium falciparum [98]
- Aequorea victoria [98]
- Schizosaccharomyces pombe [97]
- Salmonella enterica [92]
- Enterobacteria phage t4 [90]
- Plasmodium falciparum [84]
- Hepatitis b virus [82]
- Trypanosoma brucei [81]
- Bacillus sp. (strain ps3) [80]
- Pseudomonas aeruginosa [78]
- Vibrio cholerae [77]
- Mycolicibacterium smegmatis [76]
- Spinacia oleracea [75]
- Mycoplasma pneumoniae [74]
- Geobacillus stearothermophilus [70]
- (no species) [69]
- Severe acute respiratory syndrome coronavirus [69]
- Chikungunya virus [69]
- Streptococcus pyogenes [66]
- Eastern equine encephalitis virus [65]
- Legionella pneumophila [61]
- Clostridioides difficile [60]
- Thermus thermophilus [60]
- Schizosaccharomyces pombe [60]
- Human cytomegalovirus [59]
- Cricetulus griseus [58]
- African swine fever virus [57]
- Zaire ebolavirus [56]
- Enterovirus a [56]
- Human immunodeficiency virus [55]
- Klebsiella pneumoniae [55]
- Saccharomyces cerevisiae [55]
- Dna molecule [53]
- Amanita phalloides [53]
- Human herpesvirus 1 [52]
- Dictyostelium discoideum [52]
- Canis lupus [52]
- Sus scrofa [52]
- Pseudomonas phage phi6 [51]
- Enterovirus d [51]
- Escherichia coli [51]
- (no species) [50]
- Monkeypox virus [50]
- Middle east respiratory syndrome-related coronavirus [50]
- Thermotoga maritima [50]
- Epstein-barr virus (strain gd1) [45]
- Streptococcus thermophilus [45]
- Flavobacterium johnsoniae [45]
- Salmonella enterica [45]
- Adeno-associated virus [44]
- Trichomonas vaginalis [44]
- Human immunodeficiency virus 1 [44]
- Thermoplasma acidophilum [43]
- Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [42]
- Methanothermobacter marburgensis [42]
- Meiothermus taiwanensis [41]
- Escherichia phage lambda [41]
- Euglena gracilis [41]
EM Method
- Single-particle [36694]
- Helical reconstruction [2333]
- Tomography [2315]
- Subtomogram averaging [2248]
- Electron Crystallography [69]
Resolution
- < 2Å [320]
- ≥ 2Å and < 3Å [8827]
- ≥ 3Å and < 4Å [18075]
- ≥ 4Å and < 5Å [4512]
- ≥ 5Å and < 6Å [1013]
- ≥ 6Å and < 8Å [2228]
- ≥ 8Å and < 12Å [1954]
- ≥ 12Å and < 16Å [1055]
- ≥ 16Å and < 20Å [759]
- ≥ 20Å and < 30Å [2128]
- ≥ 30Å [1380]
Model molecular weight
- 0-50 kDa [550]
- 50-100 kDa [1572]
- 100-250 kDa [7854]
- 250-500 kDa [6848]
- 500-1000 kDa [3956]
- 1-2 MDa [1895]
- 2-5 MDa [1966]
- 5-10 MDa [530]
- > 10 MDa [383]
Release Date
- 2026 [4667]
- 2025 [8488]
- 2024 [6626]
- 2023 [5857]
- 2022 [4614]
- 2021 [3370]
- 2020 [2943]
- 2019 [1984]
- 2018 [1475]
- 2017 [843]
- 2016 [732]
- 2015 [383]
- 2014 [343]
- 2013 [263]
- 2012 [259]
- 2011 [171]
- 2010 [169]
- 2009 [135]
- 2008 [47]
- 2007 [107]
- 2006 [89]
- 2005 [32]
- 2004 [24]
- 2003 [34]
- 2002 [4]
Author by name
- Liu J [1751]
- Ward AB [1288]
- Zhang Y [1281]
- Zhang X [1263]
- Ren G [1192]
- Wang Y [1191]
- Wang X [1097]
- Zhang M [1052]
- Li Y [989]
- Liu Y [931]
- Wang J [867]
- Li X [842]
- Zhang Z [811]
- Li Z [805]
- Li S [777]
- Wang S [716]
- Zhang J [715]
- Li J [695]
- Zhang L [668]
- Chen Y [648]
- Wang L [625]
- Liu S [623]
- Liu C [618]
- Wang H [598]
- Zhou ZH [573]
- Li H [564]
- Chen Z [541]
- Wu H [535]
- Wang C [529]
- Zhang S [513]
- Chen X [511]
- Liu H [506]
- Beckmann R [504]
- Zhu Y [491]
- Liu Z [480]
- Wang Q [475]
- Li D [474]
- Zhang H [462]
- Shi Y [460]
- Zhang K [456]
- Gao Y [453]
- Liu X [451]
- Chen J [438]
- Cheng J [434]
- Han J [422]
- Hu Z [419]
- Yang Y [412]
- Wang Z [409]
- Xu Y [407]
- Yang X [404]
- Chiu W [401]
- Cottrell CA [395]
- Xu J [395]
- Zhang P [389]
- Burton DR [377]
- Zhao Y [377]
- Sun Y [367]
- Liu L [364]
- Liu JF [361]
- Berninghausen O [354]
- Zhang C [353]
- Li W [350]
- Wu C [344]
- Gang O [340]
- Brown A [335]
- Huang Y [335]
- Zhang R [335]
- Wang F [334]
- Wu J [334]
- Zhou L [332]
- Chen L [327]
- Jiang Y [323]
- Wang P [321]
- Ozorowski G [320]
- Li M [317]
- Zhao X [317]
- Scheres SHW [312]
- Kotecha A [311]
- Kwong PD [310]
- Zhang Q [310]
- Xu C [305]
- Wang M [300]
- Yu X [298]
- Liu B [297]
- Wilson IA [294]
- Cheng Y [290]
- Zhou Y [290]
- Sewall LM [289]
- Li L [287]
- Wu Y [287]
- Zhang W [286]
- Klinge S [284]
- Yuan Q [284]
- He Y [281]
- Gao N [278]
- Sun L [276]
- Turner HL [276]
- Richey ST [274]
- Lei D [272]
- Rubinstein JL [272]
Author by ORCID
- Ren G [1142]
- Liu J [1038]
- Ward AB [627]
- Zhou ZH [410]
- Zhang M [396]
- Cottrell CA [391]
- Chiu W [360]
- Brown A [330]
- Kotecha A [287]
- Beckmann R [281]
- Klinge S [277]
- Kwong PD [256]
- Gao N [241]
- Scheres SHW [234]
- Raunser S [224]
- Cheng Y [224]
- Tao J [223]
- Bustamante C [223]
- Ashby PD [223]
- Torres JL [221]
- Schulman BA [207]
- Andersen ES [207]
- Geary C [202]
- Thoms M [201]
- Rubinstein JL [197]
- Zeng J [193]
- Hummer G [189]
- Crispin M [189]
- Ozorowski G [183]
- Plevka P [181]
- Vanden Broeck A [178]
- Pilhofer M [177]
- Zhang P [177]
- Li H [174]
- Cheng J [173]
- Beck M [170]
- Hurt E [166]
- Lei D [166]
- Baker D [161]
- Ranson NA [160]
- Gao GF [159]
- Fuzik T [158]
- Denk T [157]
- Mahamid J [156]
- Bai XC [156]
- Xu HE [154]
- Wilson DN [154]
- Miotto MC [153]
- Du J [150]
- Han J [149]
- Rappsilber J [148]
- Gui M [148]
- Schmid MF [148]
- Nureki O [148]
- Allen JD [148]
- Borgnia MJ [147]
- Goedert M [147]
- Briggs JAG [146]
- Sobolevsky AI [143]
- Xia X [143]
- Schief WR [143]
- Zhang K [141]
- Lau B [136]
- Zhang R [136]
- Kanekiyo M [134]
- Li N [134]
- Lyumkis D [134]
- Liu J [134]
- Yang M [133]
- Doran MH [132]
- Zhou L [131]
- Burton DR [131]
- Castro CE [131]
- Marras AE [131]
- Su HJ [131]
- Amunts A [129]
- Carnathan DG [129]
- Lu W [128]
- Stahlberg H [127]
- Gouaux E [126]
- Copps J [126]
- Weninger G [126]
- Schoehn G [125]
- Novacek J [125]
- Krammer F [125]
- Egelman EH [124]
- Agard DA [123]
- Kishikawa JI [123]
- Beneke T [122]
- Wheeler RJ [122]
- Gluenz E [122]
- Fochler S [122]
- Crowe Jr Je [121]
- Xiang Y [121]
- Huiskonen JT [120]
- Engel BD [120]
- Sachse C [120]
- Leung MR [120]
- Lander GC [120]
- Venugopal H [119]
Journal
- NAT COMMUN [8149]
- TO BE PUBLISHED [4487]
- NATURE [3602]
- PNAS [2574]
- NAT STRUCT MOL BIOL [2299]
- BIORXIV [2038]
- SCIENCE [2020]
- CELL [1793]
- SCI ADV [1471]
- MOL CELL [1411]
- ELIFE [1255]
- STRUCTURE [1047]
- CELL REP [919]
- NUCLEIC ACIDS RES [846]
- EMBO J [641]
- J MOL BIOL [538]
- COMMUN BIOL [515]
- CELL RES [487]
- J VIROL [450]
- J BIOL CHEM [406]
- PLOS PATHOG [386]
- NAT MICROBIOL [382]
- NAT CHEM BIOL [369]
- CELL DISCOV [346]
- ACTA CRYSTALLOGR D STRUCT BIOL [326]
- SCI REP [294]
- NAT METHODS [262]
- J STRUCT BIOL [227]
- MBIO [205]
- NAT PLANTS [173]
- EMBO REP [168]
- PROTEIN SCI [168]
- PLOS BIOL [167]
- J AM CHEM SOC [156]
- IMMUNITY [150]
- J CELL BIOL [142]
- CELL HOST MICROBE [121]
- PROTEIN CELL [118]
- NEURON [112]
- IUCRJ [95]
- NPJ VACCINES [94]
- SCI TRANSL MED [93]
- VIRUSES [93]
- LIFE SCI ALLIANCE [89]
- INT J MOL SCI [81]
- PNAS NEXUS [81]
- ISCIENCE [76]
- DEV CELL [75]
- PLOS ONE [72]
- BIOCHEMISTRY [71]
- RES SQ [67]
- ACS NANO [64]
- COMMUN CHEM [64]
- CURR BIOL [59]
- ADV SCI [58]
- J MED CHEM [56]
- FRONT ENDOCRINOL [53]
- J CLIN INV [52]
- SCI IMMUNOL [52]
- ACTA NEUROPATHOL [51]
- J STRUCT BIOL X [47]
- INT J BIOL MACROMOL [46]
- SIGNAL TRANSDUCT TARGET THER [45]
- FEBS J [44]
- ANGEW CHEM INT ED ENGL [42]
- NAT NANOTECHNOL [42]
- VIROLOGY [39]
- BIOCHEM BIOPHYS RES COMMUN [38]
- BLOOD [38]
- NAT CELL BIOL [38]
- GENES DEV [36]
- J BACTERIOL [36]
- MOL BIOL CELL [36]
- MOL PLANT [35]
- FRONT MOL BIOSCI [34]
- RNA [34]
- J CELL SCI [33]
- FEBS LETT [32]
- ISME J [32]
- MOL MICROBIOL [32]
- NAT CATAL [32]
- BIOCHIM BIOPHYS ACTA MOL CELL BIOL LIPIDS [31]
- BIOMOLECULES [30]
- NAT CHEM [30]
- BIOCHEM J [28]
- FRONT IMMUNOL [27]
- J EXP MED [27]
- ACS CHEM BIOL [26]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [26]
- PLANT CELL [26]
- CELL REP METHODS [25]
- ACS CENT SCI [24]
- EMERG MICROBES INFECT [24]
- FRONT MICROBIOL [24]
- J GEN VIROL [24]
- J.MOL.CELL.CARDIOL. [23]
- CELL CHEM BIOL [22]
- OPEN BIOL [21]
- PLANT COMMUN. [21]
- HLIFE [20]
Software
- RELION [11908]
- CRYOSPARC [10993]
- CTFFIND [2050]
- GCTF [1397]
- IMOD [890]
- SPIDER [608]
- TOMOCTF [517]
- WARP [514]
- IPET [425]
- EMAN2 [320]
- CHIMERA [305]
- CISTEM [295]
- COOT [241]
- EMAN [241]
- FREALIGN [241]
- DYNAMO [231]
- PHENIX [210]
- UCSF CHIMERAX [190]
- UCSF CHIMERA [139]
- CRYOLO [129]
- JSPR [127]
- PYTOM [118]
- IMAGIC [116]
- SPHIRE [109]
- XMIPP [108]
- PEET [102]
- ETOMO [73]
- AV3 [70]
- MATLAB [68]
- EMCLARITY [64]
- NOVACTF [63]
- AUTO3DEM [62]
- SPARX [56]
- TOMO3D [54]
- CTFPHASEFLIP [52]
- NOVASTA [51]
- TOM TOOLBOX [51]
- EMAN2, SPARX [42]
- M [42]
- CTFFIND3 [40]
- STOPGAP [40]
- SITUS [36]
- CRYODRGN [34]
- IMAGIC, SPIDER [34]
- URO [34]
- MDFF [32]
- TOM [32]
- CTFFIND3, RELION [31]
- EM3DR2 [28]
- IHRSR [27]
- SCIPION [27]
- EMFIT [26]
- ISOLDE [26]
- SPRING [25]
- MPSA [24]
- BSOFT [23]
- CTFFIND4 [23]
- IMIRS [23]
- SIMPLE [23]
- SPIDER, FREALIGN [23]
- SUBTOM [23]
- PROTOMO [22]
- O [20]
- FREALIX [19]
- IMOD, TOMO3D [19]
- EMAN1 [18]
- MOTIONCORR2 [18]
- I3 [17]
- TOMOALIGN [17]
- AIMLESS [16]
- IMOD, TOMO3D, PEET [16]
- MULTI-PATH SA [16]
- SPIDER, IMAGIC [16]
- COMET [15]
- RELION, CTFFIND3 [15]
- CHIMERA, COOT [14]
- IMOD, PEET [14]
- J3DR [14]
- MRC [14]
- EMAN2, RELION [12]
- JALIGN [12]
- PHOELIX [12]
- PHOELIX, SUPRIM [12]
- SERIALEM [12]
- SPIDER, EMAN [12]
- SPIDER, IHRSR [12]
- ARETOMO [11]
- CHIMERA, SITUS [11]
- EMAN2, SPIDER, XMIPP [11]
- JSPR, EMAN2, EMAN [11]
- SPIDER PACKAGE [11]
- SPIDER, APPION [11]
- SPIDER, RELION [11]
- DIREX [10]
- EMAN2, RELION, 1.3 [10]
- IMAGIC-5 [10]
- EMAN1, EMAN2 [9]
- IMOD, BSOFT, SPIDER, TOM, PACKAGE, MATLAB [9]
- MRC, IMAGIC, SPIDER [9]
- SPIDER XMIPP [9]
Microscope
- FEI TITAN KRIOS [23319]
- TFS KRIOS [10432]
- FEI TALOS ARCTICA [2000]
- TFS GLACIOS [1251]
- FEI TECNAI F20 [1066]
- FEI POLARA 300 [902]
- JEOL CRYO ARM 300 [558]
- FEI TECNAI SPIRIT [555]
- FEI TECNAI F30 [460]
- ZEISS LIBRA120PLUS [440]
- FEI TITAN [396]
- FEI TECNAI ARCTICA [305]
- FEI TECNAI 20 [207]
- FEI TECNAI 12 [183]
- JEOL 3200FSC [173]
- TFS TALOS [169]
- FEI/PHILIPS CM200FEG [159]
- JEOL 2200FS [137]
- JEOL CRYO ARM 200 [78]
- FEI/PHILIPS CM300FEG/T [77]
- JEOL 2010F [77]
- JEOL 2100F [72]
- TFS TALOS F200C [62]
- JEOL 2100 [52]
- FEI/PHILIPS EM420 [47]
- JEOL 3200FS [44]
- FEI/PHILIPS CM120T [34]
- TFS TITAN THEMIS [32]
- JEOL 1230 [31]
- JEOL 3100FFC [30]
- OTHER [30]
- TFS TALOS L120C [28]
- FEI MORGAGNI [25]
- JEOL 1400 [25]
- JEOL 3000SFF [21]
- TFS TUNDRA [21]
- FEI/PHILIPS CM200T [20]
- FEI/PHILIPS CM200FEG/ST [19]
- JEOL 4000EX [19]
- JEOL 4000 [17]
- JEOL 2200FSC [14]
- JEOL 1200EXII [13]
- JEOL 1400/HR YPS FEG [11]
- FEI/PHILIPS CM300FEG/HE [10]
- FEI/PHILIPS CM200FEG/UT [8]
- FEI/PHILIPS CM12 [7]
- JEOL 2010 [7]
- FEI TECNAI 10 [6]
- JEOL 1200EX [6]
- FEI TECNAI SPHERA [5]
- JEOL 100CX [5]
- JEOL 2000EX [5]
- JEOL KYOTO-3000SFF [4]
- FEI/PHILIPS CM300FEG/ST [3]
- HITACHI EF2000 [3]
- JEOL 1200 [3]
- FEI/PHILIPS CM10 [2]
- JEOL 1010 [2]
- JEOL 2010HC [2]
- JEOL 2010UHR [2]
- JEOL 3100FEF [2]
- FEI/PHILIPS CM200FEG/SOPHIE [1]
- FEI/PHILIPS EM400 [1]
- HITACHI H-9500SD [1]
- HITACHI H7600 [1]
- JEOL 2010HT [1]
- ZEISS LEO912 [1]
Electron Source
- FIELD EMISSION GUN [41906]
- LAB6 [1402]
- OTHER [215]
- TUNGSTEN HAIRPIN [137]
Film or detector model
- GATAN K3 6K X 4K [11090]
- GATAN K3 BIOQUANTUM 6K X 4K [8768]
- GATAN K2 SUMMIT 4K X 4K [8471]
- FEI FALCON IV 4K X 4K [4138]
- FEI FALCON III 4K X 4K [2206]
- GATAN K2 QUANTUM 4K X 4K [1806]
- FEI FALCON II 4K X 4K [1255]
- TFS FALCON 4I 4K X 4K [932]
- GATAN ULTRASCAN 4000 4K X 4K [891]
- KODAK SO-163 FILM [742]
- TVIPS TEMCAM-F416 4K X 4K [629]
- GATAN K3 BIOCONTINUUM 6K X 4K [540]
- FEI EAGLE 4K X 4K [348]
- OTHER [309]
- FEI CETA 4K X 4K [220]
- GATAN K2 BASE 4K X 4K [168]
- GATAN K2 4K X 4K [118]
- DIRECT ELECTRON DE-20 5K X 3K [115]
- TVIPS TEMCAM-F415 4K X 4K [105]
- GENERIC CCD [83]
- FEI FALCON I 4K X 4K [68]
- GATAN ULTRASCAN 1000 2K X 2K [57]
- GENERIC GATAN 4K X 4K [57]
- FEI EAGLE 2K X 2K [48]
- DIRECT ELECTRON DE-16 4K X 4K [37]
- GENERIC TVIPS 4K X 4K [37]
- DIRECT ELECTRON DE-64 8K X 8K [36]
- TVIPS TEMCAM-F816 8K X 8K [34]
- GATAN K2 IS 4K X 4K [31]
- GENERIC GATAN [28]
- GATAN MULTISCAN [27]
- DIRECT ELECTRON DE-12 4K X 3K [23]
- TVIPS TEMCAM-F224 2K X 2K [22]
- DIRECT ELECTRON DE-10 5K X 4K [21]
- DIRECT ELECTRON APOLLO 4K X 4K [20]
- TVIPS TEMCAM-F216 2K X 2K [17]
- DECTRIS SINGLA 1K X 1K [12]
- KODAK 4489 FILM [12]
- GENERIC TVIPS [11]
- AGFA SCIENTA FILM [8]
- GATAN ORIUS SC200 2K X 2K [8]
- GENERIC FILM [8]
- GENERIC GATAN 2K X 2K [8]
- GATAN ULTRASCAN 10000 10K X 10K [6]
- GENERIC CCD 2K X 2K [6]
- DECTRIS ELA 1K X 0.5K [5]
- GATAN ORIUS SC1000 4K X 2.7K [4]
- GATAN ALPINE 2.3K X 3.2K [3]
- GENERIC TVIPS 2K X 2K [3]
- GENERIC IMAGE PLATES [2]
- DECTRIS ARINA 0.2K X 0.2K [1]
- GATAN ORIUS SC600 2.7K X 2.7K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- PDB [43307]
- UniProt [26219]
- PDBe-Kb [24303]
- AlphaFold DB [23434]
- InterPro [20491]
- Gene Ontology [19769]
- Pfam [17914]
- ChEBI [15125]
- ChEMBL [13525]
- DrugBank [12434]
- Complex Portal [7370]
- EMPIAR [4020]
- SCOP2 [530]
- CATH [337]
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 9n3b
Q-score: 0.419
Khare B, Arnaud CA, Klose T, Rossmann MG, Crowe JE, Kuhn RJ
EMBO Rep (2026) [ DOI: doi:10.1038/s44319-026-00851-z ]
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 9h52
Q-score: 0.216
Singh V, Shiriaev D, Bilalli L, Khawaja A, Rorbach J
Nat Commun (2026) 17 [ Pubmed: 42342677 DOI: doi:10.1038/s41467-026-74700-x ]
Resolution: 3.9 Å
EM Method: Single-particle
Schmidt SL, Dostal J, Sen S, Hovan A, Walter D, Appleby MV, Kojima A, Kato HE, Beale JH, Kloz M, Schertler GFX, Isaikina P
Science (2026) 392 pp. eadz3624-eadz3624 [ Pubmed: 42348698 DOI: doi:10.1126/science.adz3624 ]
Resolution: 6.7 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9rbu
Q-score: 0.118
Vazquez-Sarandeses E, Mikirtumov V, Noel J, Kudryashev M, Daumke O
biorxiv.org (2025) [ DOI: doi:10.1101/2025.06.05.658037 ]
Resolution: 10.1 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9rc1
Q-score: 0.075
Vazquez-Sarandeses E, Mikirtumov V, Noel J, Kudryashev M, Daumke O
To Be Published
Resolution: 2.4 Å
EM Method: Single-particle
Pellegrino S, Drulyte I, Harman M, Bezerra GA
To Be Published
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 9rqj
Q-score: 0.529
Thangaratnarajah C, Ettema TW, Slotboom DJ
To Be Published
Resolution: 2.65 Å
EM Method: Single-particle
Fitted PDBs: 9rql
Q-score: 0.546
Cifuente JO, Povolo L, Halim A, Ubarretxena-Belandia I
To Be Published
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 9rqm
Q-score: 0.517
Cifuente JO, Povolo L, Halim A, Ubarretxena-Belandia I
To Be Published
Resolution: 2.94 Å
EM Method: Single-particle
Fitted PDBs: 9rqn
Q-score: 0.515
Cifuente JO, Povolo L, Halim A, Ubarretxena-Belandia I
To Be Published
Filter By
Current Database
- EMDB [43659]
Current status
- REL [43659]
Sample type
- Complex [35281]
- Protein [29292]
- Ligand [16263]
- RNA [4114]
- Virus [3117]
- DNA [2870]
- Cellular component [2593]
- Sample [2385]
- Cell [1403]
- Tissue [295]
- Other [196]
- Em label [3]
Organism
- Homo sapiens [15272]
- Synthetic construct [3229]
- Mus musculus [2826]
- Escherichia coli [2409]
- Saccharomyces cerevisiae [2028]
- Severe acute respiratory syndrome coronavirus [1540]
- Rattus norvegicus [972]
- Escherichia coli [926]
- Bos taurus [898]
- Human immunodeficiency virus 1 [869]
- Oryctolagus cuniculus [834]
- Xenopus laevis [717]
- Saccharomyces cerevisiae [663]
- Sus scrofa [639]
- Arabidopsis thaliana [422]
- Lama glama [422]
- Macaca mulatta [332]
- Drosophila melanogaster [285]
- Chlamydomonas reinhardtii [263]
- Mycolicibacterium smegmatis [255]
- Influenza a virus [247]
- Mycobacterium tuberculosis [199]
- Gallus gallus [187]
- Tetrahymena thermophila [172]
- Enterobacteria phage m13 [164]
- Escherichia coli [164]
- Bacillus subtilis [163]
- Staphylococcus aureus [160]
- Pseudomonas aeruginosa [153]
- Thermus thermophilus [140]
- Danio rerio [138]
- Caenorhabditis elegans [133]
- Leishmania tarentolae [130]
- Chaetomium thermophilum [129]
- Vicugna pacos [125]
- Chaetomium thermophilum [116]
- Ovis aries [113]
- Saccharomyces cerevisiae [110]
- Bacillus subtilis [100]
- Escherichia virus t7 [99]
- Mycobacterium tuberculosis [99]
- Synechocystis sp. pcc 6803 [98]
- Plasmodium falciparum [98]
- Aequorea victoria [98]
- Schizosaccharomyces pombe [97]
- Salmonella enterica [92]
- Enterobacteria phage t4 [90]
- Plasmodium falciparum [84]
- Hepatitis b virus [82]
- Trypanosoma brucei [81]
- Bacillus sp. (strain ps3) [80]
- Pseudomonas aeruginosa [78]
- Vibrio cholerae [77]
- Mycolicibacterium smegmatis [76]
- Spinacia oleracea [75]
- Mycoplasma pneumoniae [74]
- Geobacillus stearothermophilus [70]
- (no species) [69]
- Severe acute respiratory syndrome coronavirus [69]
- Chikungunya virus [69]
- Streptococcus pyogenes [66]
- Eastern equine encephalitis virus [65]
- Legionella pneumophila [61]
- Clostridioides difficile [60]
- Thermus thermophilus [60]
- Schizosaccharomyces pombe [60]
- Human cytomegalovirus [59]
- Cricetulus griseus [58]
- African swine fever virus [57]
- Zaire ebolavirus [56]
- Enterovirus a [56]
- Human immunodeficiency virus [55]
- Klebsiella pneumoniae [55]
- Saccharomyces cerevisiae [55]
- Dna molecule [53]
- Amanita phalloides [53]
- Human herpesvirus 1 [52]
- Dictyostelium discoideum [52]
- Canis lupus [52]
- Sus scrofa [52]
- Pseudomonas phage phi6 [51]
- Enterovirus d [51]
- Escherichia coli [51]
- (no species) [50]
- Monkeypox virus [50]
- Middle east respiratory syndrome-related coronavirus [50]
- Thermotoga maritima [50]
- Epstein-barr virus (strain gd1) [45]
- Streptococcus thermophilus [45]
- Flavobacterium johnsoniae [45]
- Salmonella enterica [45]
- Adeno-associated virus [44]
- Trichomonas vaginalis [44]
- Human immunodeficiency virus 1 [44]
- Thermoplasma acidophilum [43]
- Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [42]
- Methanothermobacter marburgensis [42]
- Meiothermus taiwanensis [41]
- Escherichia phage lambda [41]
- Euglena gracilis [41]
EM Method
- Single-particle [36694]
- Helical reconstruction [2333]
- Tomography [2315]
- Subtomogram averaging [2248]
- Electron Crystallography [69]
Resolution
- < 2Å [320]
- ≥ 2Å and < 3Å [8827]
- ≥ 3Å and < 4Å [18075]
- ≥ 4Å and < 5Å [4512]
- ≥ 5Å and < 6Å [1013]
- ≥ 6Å and < 8Å [2228]
- ≥ 8Å and < 12Å [1954]
- ≥ 12Å and < 16Å [1055]
- ≥ 16Å and < 20Å [759]
- ≥ 20Å and < 30Å [2128]
- ≥ 30Å [1380]
Model molecular weight
- 0-50 kDa [550]
- 50-100 kDa [1572]
- 100-250 kDa [7854]
- 250-500 kDa [6848]
- 500-1000 kDa [3956]
- 1-2 MDa [1895]
- 2-5 MDa [1966]
- 5-10 MDa [530]
- > 10 MDa [383]
Release Date
- 2026 [4667]
- 2025 [8488]
- 2024 [6626]
- 2023 [5857]
- 2022 [4614]
- 2021 [3370]
- 2020 [2943]
- 2019 [1984]
- 2018 [1475]
- 2017 [843]
- 2016 [732]
- 2015 [383]
- 2014 [343]
- 2013 [263]
- 2012 [259]
- 2011 [171]
- 2010 [169]
- 2009 [135]
- 2008 [47]
- 2007 [107]
- 2006 [89]
- 2005 [32]
- 2004 [24]
- 2003 [34]
- 2002 [4]
Author by name
- Liu J [1751]
- Ward AB [1288]
- Zhang Y [1281]
- Zhang X [1263]
- Ren G [1192]
- Wang Y [1191]
- Wang X [1097]
- Zhang M [1052]
- Li Y [989]
- Liu Y [931]
- Wang J [867]
- Li X [842]
- Zhang Z [811]
- Li Z [805]
- Li S [777]
- Wang S [716]
- Zhang J [715]
- Li J [695]
- Zhang L [668]
- Chen Y [648]
- Wang L [625]
- Liu S [623]
- Liu C [618]
- Wang H [598]
- Zhou ZH [573]
- Li H [564]
- Chen Z [541]
- Wu H [535]
- Wang C [529]
- Zhang S [513]
- Chen X [511]
- Liu H [506]
- Beckmann R [504]
- Zhu Y [491]
- Liu Z [480]
- Wang Q [475]
- Li D [474]
- Zhang H [462]
- Shi Y [460]
- Zhang K [456]
- Gao Y [453]
- Liu X [451]
- Chen J [438]
- Cheng J [434]
- Han J [422]
- Hu Z [419]
- Yang Y [412]
- Wang Z [409]
- Xu Y [407]
- Yang X [404]
- Chiu W [401]
- Cottrell CA [395]
- Xu J [395]
- Zhang P [389]
- Burton DR [377]
- Zhao Y [377]
- Sun Y [367]
- Liu L [364]
- Liu JF [361]
- Berninghausen O [354]
- Zhang C [353]
- Li W [350]
- Wu C [344]
- Gang O [340]
- Brown A [335]
- Huang Y [335]
- Zhang R [335]
- Wang F [334]
- Wu J [334]
- Zhou L [332]
- Chen L [327]
- Jiang Y [323]
- Wang P [321]
- Ozorowski G [320]
- Li M [317]
- Zhao X [317]
- Scheres SHW [312]
- Kotecha A [311]
- Kwong PD [310]
- Zhang Q [310]
- Xu C [305]
- Wang M [300]
- Yu X [298]
- Liu B [297]
- Wilson IA [294]
- Cheng Y [290]
- Zhou Y [290]
- Sewall LM [289]
- Li L [287]
- Wu Y [287]
- Zhang W [286]
- Klinge S [284]
- Yuan Q [284]
- He Y [281]
- Gao N [278]
- Sun L [276]
- Turner HL [276]
- Richey ST [274]
- Lei D [272]
- Rubinstein JL [272]
Author by ORCID
- Ren G [1142]
- Liu J [1038]
- Ward AB [627]
- Zhou ZH [410]
- Zhang M [396]
- Cottrell CA [391]
- Chiu W [360]
- Brown A [330]
- Kotecha A [287]
- Beckmann R [281]
- Klinge S [277]
- Kwong PD [256]
- Gao N [241]
- Scheres SHW [234]
- Raunser S [224]
- Cheng Y [224]
- Tao J [223]
- Bustamante C [223]
- Ashby PD [223]
- Torres JL [221]
- Schulman BA [207]
- Andersen ES [207]
- Geary C [202]
- Thoms M [201]
- Rubinstein JL [197]
- Zeng J [193]
- Hummer G [189]
- Crispin M [189]
- Ozorowski G [183]
- Plevka P [181]
- Vanden Broeck A [178]
- Pilhofer M [177]
- Zhang P [177]
- Li H [174]
- Cheng J [173]
- Beck M [170]
- Hurt E [166]
- Lei D [166]
- Baker D [161]
- Ranson NA [160]
- Gao GF [159]
- Fuzik T [158]
- Denk T [157]
- Mahamid J [156]
- Bai XC [156]
- Xu HE [154]
- Wilson DN [154]
- Miotto MC [153]
- Du J [150]
- Han J [149]
- Rappsilber J [148]
- Gui M [148]
- Schmid MF [148]
- Nureki O [148]
- Allen JD [148]
- Borgnia MJ [147]
- Goedert M [147]
- Briggs JAG [146]
- Sobolevsky AI [143]
- Xia X [143]
- Schief WR [143]
- Zhang K [141]
- Lau B [136]
- Zhang R [136]
- Kanekiyo M [134]
- Li N [134]
- Lyumkis D [134]
- Liu J [134]
- Yang M [133]
- Doran MH [132]
- Zhou L [131]
- Burton DR [131]
- Castro CE [131]
- Marras AE [131]
- Su HJ [131]
- Amunts A [129]
- Carnathan DG [129]
- Lu W [128]
- Stahlberg H [127]
- Gouaux E [126]
- Copps J [126]
- Weninger G [126]
- Schoehn G [125]
- Novacek J [125]
- Krammer F [125]
- Egelman EH [124]
- Agard DA [123]
- Kishikawa JI [123]
- Beneke T [122]
- Wheeler RJ [122]
- Gluenz E [122]
- Fochler S [122]
- Crowe Jr Je [121]
- Xiang Y [121]
- Huiskonen JT [120]
- Engel BD [120]
- Sachse C [120]
- Leung MR [120]
- Lander GC [120]
- Venugopal H [119]
Journal
- NAT COMMUN [8149]
- TO BE PUBLISHED [4487]
- NATURE [3602]
- PNAS [2574]
- NAT STRUCT MOL BIOL [2299]
- BIORXIV [2038]
- SCIENCE [2020]
- CELL [1793]
- SCI ADV [1471]
- MOL CELL [1411]
- ELIFE [1255]
- STRUCTURE [1047]
- CELL REP [919]
- NUCLEIC ACIDS RES [846]
- EMBO J [641]
- J MOL BIOL [538]
- COMMUN BIOL [515]
- CELL RES [487]
- J VIROL [450]
- J BIOL CHEM [406]
- PLOS PATHOG [386]
- NAT MICROBIOL [382]
- NAT CHEM BIOL [369]
- CELL DISCOV [346]
- ACTA CRYSTALLOGR D STRUCT BIOL [326]
- SCI REP [294]
- NAT METHODS [262]
- J STRUCT BIOL [227]
- MBIO [205]
- NAT PLANTS [173]
- EMBO REP [168]
- PROTEIN SCI [168]
- PLOS BIOL [167]
- J AM CHEM SOC [156]
- IMMUNITY [150]
- J CELL BIOL [142]
- CELL HOST MICROBE [121]
- PROTEIN CELL [118]
- NEURON [112]
- IUCRJ [95]
- NPJ VACCINES [94]
- SCI TRANSL MED [93]
- VIRUSES [93]
- LIFE SCI ALLIANCE [89]
- INT J MOL SCI [81]
- PNAS NEXUS [81]
- ISCIENCE [76]
- DEV CELL [75]
- PLOS ONE [72]
- BIOCHEMISTRY [71]
- RES SQ [67]
- ACS NANO [64]
- COMMUN CHEM [64]
- CURR BIOL [59]
- ADV SCI [58]
- J MED CHEM [56]
- FRONT ENDOCRINOL [53]
- J CLIN INV [52]
- SCI IMMUNOL [52]
- ACTA NEUROPATHOL [51]
- J STRUCT BIOL X [47]
- INT J BIOL MACROMOL [46]
- SIGNAL TRANSDUCT TARGET THER [45]
- FEBS J [44]
- ANGEW CHEM INT ED ENGL [42]
- NAT NANOTECHNOL [42]
- VIROLOGY [39]
- BIOCHEM BIOPHYS RES COMMUN [38]
- BLOOD [38]
- NAT CELL BIOL [38]
- GENES DEV [36]
- J BACTERIOL [36]
- MOL BIOL CELL [36]
- MOL PLANT [35]
- FRONT MOL BIOSCI [34]
- RNA [34]
- J CELL SCI [33]
- FEBS LETT [32]
- ISME J [32]
- MOL MICROBIOL [32]
- NAT CATAL [32]
- BIOCHIM BIOPHYS ACTA MOL CELL BIOL LIPIDS [31]
- BIOMOLECULES [30]
- NAT CHEM [30]
- BIOCHEM J [28]
- FRONT IMMUNOL [27]
- J EXP MED [27]
- ACS CHEM BIOL [26]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [26]
- PLANT CELL [26]
- CELL REP METHODS [25]
- ACS CENT SCI [24]
- EMERG MICROBES INFECT [24]
- FRONT MICROBIOL [24]
- J GEN VIROL [24]
- J.MOL.CELL.CARDIOL. [23]
- CELL CHEM BIOL [22]
- OPEN BIOL [21]
- PLANT COMMUN. [21]
- HLIFE [20]
Software
- RELION [11908]
- CRYOSPARC [10993]
- CTFFIND [2050]
- GCTF [1397]
- IMOD [890]
- SPIDER [608]
- TOMOCTF [517]
- WARP [514]
- IPET [425]
- EMAN2 [320]
- CHIMERA [305]
- CISTEM [295]
- COOT [241]
- EMAN [241]
- FREALIGN [241]
- DYNAMO [231]
- PHENIX [210]
- UCSF CHIMERAX [190]
- UCSF CHIMERA [139]
- CRYOLO [129]
- JSPR [127]
- PYTOM [118]
- IMAGIC [116]
- SPHIRE [109]
- XMIPP [108]
- PEET [102]
- ETOMO [73]
- AV3 [70]
- MATLAB [68]
- EMCLARITY [64]
- NOVACTF [63]
- AUTO3DEM [62]
- SPARX [56]
- TOMO3D [54]
- CTFPHASEFLIP [52]
- NOVASTA [51]
- TOM TOOLBOX [51]
- EMAN2, SPARX [42]
- M [42]
- CTFFIND3 [40]
- STOPGAP [40]
- SITUS [36]
- CRYODRGN [34]
- IMAGIC, SPIDER [34]
- URO [34]
- MDFF [32]
- TOM [32]
- CTFFIND3, RELION [31]
- EM3DR2 [28]
- IHRSR [27]
- SCIPION [27]
- EMFIT [26]
- ISOLDE [26]
- SPRING [25]
- MPSA [24]
- BSOFT [23]
- CTFFIND4 [23]
- IMIRS [23]
- SIMPLE [23]
- SPIDER, FREALIGN [23]
- SUBTOM [23]
- PROTOMO [22]
- O [20]
- FREALIX [19]
- IMOD, TOMO3D [19]
- EMAN1 [18]
- MOTIONCORR2 [18]
- I3 [17]
- TOMOALIGN [17]
- AIMLESS [16]
- IMOD, TOMO3D, PEET [16]
- MULTI-PATH SA [16]
- SPIDER, IMAGIC [16]
- COMET [15]
- RELION, CTFFIND3 [15]
- CHIMERA, COOT [14]
- IMOD, PEET [14]
- J3DR [14]
- MRC [14]
- EMAN2, RELION [12]
- JALIGN [12]
- PHOELIX [12]
- PHOELIX, SUPRIM [12]
- SERIALEM [12]
- SPIDER, EMAN [12]
- SPIDER, IHRSR [12]
- ARETOMO [11]
- CHIMERA, SITUS [11]
- EMAN2, SPIDER, XMIPP [11]
- JSPR, EMAN2, EMAN [11]
- SPIDER PACKAGE [11]
- SPIDER, APPION [11]
- SPIDER, RELION [11]
- DIREX [10]
- EMAN2, RELION, 1.3 [10]
- IMAGIC-5 [10]
- EMAN1, EMAN2 [9]
- IMOD, BSOFT, SPIDER, TOM, PACKAGE, MATLAB [9]
- MRC, IMAGIC, SPIDER [9]
- SPIDER XMIPP [9]
Microscope
- FEI TITAN KRIOS [23319]
- TFS KRIOS [10432]
- FEI TALOS ARCTICA [2000]
- TFS GLACIOS [1251]
- FEI TECNAI F20 [1066]
- FEI POLARA 300 [902]
- JEOL CRYO ARM 300 [558]
- FEI TECNAI SPIRIT [555]
- FEI TECNAI F30 [460]
- ZEISS LIBRA120PLUS [440]
- FEI TITAN [396]
- FEI TECNAI ARCTICA [305]
- FEI TECNAI 20 [207]
- FEI TECNAI 12 [183]
- JEOL 3200FSC [173]
- TFS TALOS [169]
- FEI/PHILIPS CM200FEG [159]
- JEOL 2200FS [137]
- JEOL CRYO ARM 200 [78]
- FEI/PHILIPS CM300FEG/T [77]
- JEOL 2010F [77]
- JEOL 2100F [72]
- TFS TALOS F200C [62]
- JEOL 2100 [52]
- FEI/PHILIPS EM420 [47]
- JEOL 3200FS [44]
- FEI/PHILIPS CM120T [34]
- TFS TITAN THEMIS [32]
- JEOL 1230 [31]
- JEOL 3100FFC [30]
- OTHER [30]
- TFS TALOS L120C [28]
- FEI MORGAGNI [25]
- JEOL 1400 [25]
- JEOL 3000SFF [21]
- TFS TUNDRA [21]
- FEI/PHILIPS CM200T [20]
- FEI/PHILIPS CM200FEG/ST [19]
- JEOL 4000EX [19]
- JEOL 4000 [17]
- JEOL 2200FSC [14]
- JEOL 1200EXII [13]
- JEOL 1400/HR YPS FEG [11]
- FEI/PHILIPS CM300FEG/HE [10]
- FEI/PHILIPS CM200FEG/UT [8]
- FEI/PHILIPS CM12 [7]
- JEOL 2010 [7]
- FEI TECNAI 10 [6]
- JEOL 1200EX [6]
- FEI TECNAI SPHERA [5]
- JEOL 100CX [5]
- JEOL 2000EX [5]
- JEOL KYOTO-3000SFF [4]
- FEI/PHILIPS CM300FEG/ST [3]
- HITACHI EF2000 [3]
- JEOL 1200 [3]
- FEI/PHILIPS CM10 [2]
- JEOL 1010 [2]
- JEOL 2010HC [2]
- JEOL 2010UHR [2]
- JEOL 3100FEF [2]
- FEI/PHILIPS CM200FEG/SOPHIE [1]
- FEI/PHILIPS EM400 [1]
- HITACHI H-9500SD [1]
- HITACHI H7600 [1]
- JEOL 2010HT [1]
- ZEISS LEO912 [1]
Electron Source
- FIELD EMISSION GUN [41906]
- LAB6 [1402]
- OTHER [215]
- TUNGSTEN HAIRPIN [137]
Film or detector model
- GATAN K3 6K X 4K [11090]
- GATAN K3 BIOQUANTUM 6K X 4K [8768]
- GATAN K2 SUMMIT 4K X 4K [8471]
- FEI FALCON IV 4K X 4K [4138]
- FEI FALCON III 4K X 4K [2206]
- GATAN K2 QUANTUM 4K X 4K [1806]
- FEI FALCON II 4K X 4K [1255]
- TFS FALCON 4I 4K X 4K [932]
- GATAN ULTRASCAN 4000 4K X 4K [891]
- KODAK SO-163 FILM [742]
- TVIPS TEMCAM-F416 4K X 4K [629]
- GATAN K3 BIOCONTINUUM 6K X 4K [540]
- FEI EAGLE 4K X 4K [348]
- OTHER [309]
- FEI CETA 4K X 4K [220]
- GATAN K2 BASE 4K X 4K [168]
- GATAN K2 4K X 4K [118]
- DIRECT ELECTRON DE-20 5K X 3K [115]
- TVIPS TEMCAM-F415 4K X 4K [105]
- GENERIC CCD [83]
- FEI FALCON I 4K X 4K [68]
- GATAN ULTRASCAN 1000 2K X 2K [57]
- GENERIC GATAN 4K X 4K [57]
- FEI EAGLE 2K X 2K [48]
- DIRECT ELECTRON DE-16 4K X 4K [37]
- GENERIC TVIPS 4K X 4K [37]
- DIRECT ELECTRON DE-64 8K X 8K [36]
- TVIPS TEMCAM-F816 8K X 8K [34]
- GATAN K2 IS 4K X 4K [31]
- GENERIC GATAN [28]
- GATAN MULTISCAN [27]
- DIRECT ELECTRON DE-12 4K X 3K [23]
- TVIPS TEMCAM-F224 2K X 2K [22]
- DIRECT ELECTRON DE-10 5K X 4K [21]
- DIRECT ELECTRON APOLLO 4K X 4K [20]
- TVIPS TEMCAM-F216 2K X 2K [17]
- DECTRIS SINGLA 1K X 1K [12]
- KODAK 4489 FILM [12]
- GENERIC TVIPS [11]
- AGFA SCIENTA FILM [8]
- GATAN ORIUS SC200 2K X 2K [8]
- GENERIC FILM [8]
- GENERIC GATAN 2K X 2K [8]
- GATAN ULTRASCAN 10000 10K X 10K [6]
- GENERIC CCD 2K X 2K [6]
- DECTRIS ELA 1K X 0.5K [5]
- GATAN ORIUS SC1000 4K X 2.7K [4]
- GATAN ALPINE 2.3K X 3.2K [3]
- GENERIC TVIPS 2K X 2K [3]
- GENERIC IMAGE PLATES [2]
- DECTRIS ARINA 0.2K X 0.2K [1]
- GATAN ORIUS SC600 2.7K X 2.7K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- PDB [43307]
- UniProt [26219]
- PDBe-Kb [24303]
- AlphaFold DB [23434]
- InterPro [20491]
- Gene Ontology [19769]
- Pfam [17914]
- ChEBI [15125]
- ChEMBL [13525]
- DrugBank [12434]
- Complex Portal [7370]
- EMPIAR [4020]
- SCOP2 [530]
- CATH [337]
