Filter By
Current Database
- EMDB [18648]
Current status
- REL [18648]
Sample type
- Complex [13555]
- Protein [11930]
- Ligand [5730]
- Sample [2359]
- RNA [2091]
- Virus [1543]
- DNA [1196]
- Cellular component [1161]
- Cell [1039]
- Tissue [178]
- Other [64]
- Em label [2]
Organism
- Homo sapiens [5420]
- Escherichia coli [1410]
- Saccharomyces cerevisiae [1266]
- Synthetic construct [1131]
- Mus musculus [929]
- Escherichia coli [530]
- Bos taurus [462]
- Severe acute respiratory syndrome coronavirus [323]
- Saccharomyces cerevisiae [281]
- Oryctolagus cuniculus [278]
- Rattus norvegicus [265]
- Sus scrofa [259]
- Chlamydomonas reinhardtii [204]
- Lama glama [203]
- Drosophila melanogaster [187]
- Xenopus laevis [177]
- Human immunodeficiency virus 1 [171]
- Chaetomium thermophilum [124]
- Mycolicibacterium smegmatis [122]
- Escherichia coli [111]
- Ovis aries [100]
- Caenorhabditis elegans [98]
- Gallus gallus [98]
- Arabidopsis thaliana [90]
- Chaetomium thermophilum [88]
- Mycoplasma pneumoniae [87]
- Synechocystis sp. pcc 6803 [83]
- Vicugna pacos [81]
- Enterobacteria phage t4 [79]
- Staphylococcus aureus [79]
- Mycobacterium tuberculosis [75]
- Sus scrofa [71]
- Bacillus subtilis [67]
- Pseudomonas phage phi6 [65]
- Bacillus subtilis [62]
- Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [59]
- Polytomella sp. pringsheim 198.80 [59]
- Schizosaccharomyces pombe [57]
- Escherichia coli [56]
- Mycobacterium tuberculosis [56]
- Hepatitis b virus [54]
- Dictyostelium discoideum [52]
- Trypanosoma brucei [52]
- Pseudomonas aeruginosa [51]
- Neurospora crassa [49]
- Plasmodium falciparum [49]
- Thermus thermophilus [48]
- Spinacia oleracea [48]
- Thermus thermophilus [47]
- Torpedo marmorata [47]
- Staphylococcus phage 812 [45]
- Salmonella enterica [45]
- Canis lupus [45]
- Yarrowia lipolytica [44]
- Methanothermobacter marburgensis [43]
- Tetrahymena thermophila [43]
- Influenza a virus [40]
- Mycolicibacterium smegmatis [40]
- Potato virus y [39]
- Klebsiella pneumoniae [39]
- Shigella flexneri [39]
- Clostridium botulinum [38]
- Photorhabdus luminescens [35]
- Aequorea victoria [34]
- Human herpesvirus 1 [33]
- Simian virus 40 [33]
- Sinapis alba [33]
- Pseudomonas aeruginosa [32]
- Campylobacter jejuni [31]
- Plasmodium falciparum [31]
- Amanita phalloides [31]
- Yersinia entomophaga [31]
- Dna molecule [30]
- Saccharomyces cerevisiae [30]
- Apis mellifera [30]
- Rous sarcoma virus [29]
- Tobacco mosaic virus [29]
- Thermoplasma acidophilum [29]
- Equus caballus [29]
- Serratia entomophila [28]
- Pyrococcus furiosus [27]
- Clostridioides difficile [26]
- Candidatus arthromitus sp. sfb-mouse-nl [26]
- Aquifex aeolicus [26]
- Staphylococcus aureus [26]
- (no species) [25]
- Streptococcus pneumoniae [25]
- Dictyostelium discoideum [25]
- Influenza a virus [25]
- Halothiobacillus neapolitanus [25]
- Unidentified adenovirus [24]
- Escherichia phage ms2 [24]
- Pseudomonas phage jbd30 [24]
- Streptococcus thermophilus [24]
- Kluyveromyces lactis [24]
- Myxococcus xanthus [24]
- Staphylococcus phage 812k1/420 [24]
- Brassica oleracea [24]
- Streptomyces coelicolor [23]
- Human herpesvirus 1 [23]
EM Method
- Single-particle [14653]
- Subtomogram averaging [1780]
- Helical reconstruction [1142]
- Tomography [1029]
- Electron Crystallography [44]
Resolution
- < 2Å [181]
- ≥ 2Å and < 3Å [3515]
- ≥ 3Å and < 4Å [6280]
- ≥ 4Å and < 5Å [1862]
- ≥ 5Å and < 6Å [476]
- ≥ 6Å and < 8Å [1111]
- ≥ 8Å and < 12Å [1235]
- ≥ 12Å and < 16Å [575]
- ≥ 16Å and < 20Å [521]
- ≥ 20Å and < 30Å [1072]
- ≥ 30Å [766]
Model molecular weight
- 0-50 kDa [198]
- 50-100 kDa [524]
- 100-250 kDa [2619]
- 250-500 kDa [2075]
- 500-1000 kDa [1602]
- 1-2 MDa [1094]
- 2-5 MDa [983]
- 5-10 MDa [226]
- > 10 MDa [146]
Release Date
- 2026 [1757]
- 2025 [2857]
- 2024 [2683]
- 2023 [2152]
- 2022 [1849]
- 2021 [1641]
- 2020 [1281]
- 2019 [849]
- 2018 [521]
- 2017 [461]
- 2016 [535]
- 2015 [333]
- 2014 [291]
- 2013 [271]
- 2012 [280]
- 2011 [165]
- 2010 [130]
- 2009 [141]
- 2008 [60]
- 2007 [134]
- 2006 [126]
- 2005 [45]
- 2004 [34]
- 2003 [44]
- 2002 [8]
Author by name
- Beckmann R [494]
- Cramer P [371]
- Berninghausen O [357]
- Kotecha A [345]
- Scheres SHW [330]
- Pilhofer M [317]
- Baumeister W [295]
- Beck M [295]
- Plevka P [261]
- Raunser S [253]
- Zhang P [245]
- Novacek J [234]
- Schulman BA [233]
- Urlaub H [233]
- Amunts A [231]
- Plitzko JM [227]
- Zhang X [224]
- Dienemann C [217]
- Briggs JAG [212]
- Fuzik T [210]
- Cheng J [209]
- Hummer G [208]
- Huiskonen JT [205]
- Murzin AG [205]
- Ranson NA [204]
- Stuart DI [197]
- Goedert M [196]
- Becker T [194]
- Kuhlbrandt W [191]
- Mahamid J [191]
- Rappsilber J [191]
- Thoms M [187]
- Engel BD [185]
- Spahn CMT [184]
- Mielke T [183]
- Stahlberg H [180]
- Hurt E [179]
- Stark H [178]
- Xu J [178]
- Welsch S [172]
- Wilson DN [163]
- Pfeffer S [161]
- Zhang Z [161]
- Schoehn G [160]
- Beck F [159]
- Ban N [157]
- Spikes TE [157]
- Walker JE [156]
- Hirst J [155]
- Montgomery MG [154]
- Denk T [149]
- Turonova B [149]
- Murphy BJ [148]
- Saibil HR [141]
- Lovestam S [139]
- Bottcher B [138]
- Sachse C [138]
- Boehringer D [136]
- Burger J [135]
- Clare DK [132]
- Steyaert J [132]
- Mclaughlin SH [130]
- Greber BJ [127]
- Rosenthal PB [125]
- Muller CW [122]
- Aricescu AR [121]
- Dybkov O [120]
- Hardwick SW [120]
- Aibara S [119]
- Muench SP [119]
- Pardon E [119]
- Weiss GL [119]
- Mann M [118]
- Mills DJ [118]
- Kater L [117]
- Blaza JN [116]
- Carrique L [116]
- Chirgadze DY [114]
- Brown A [113]
- Cusack S [113]
- Dietz H [113]
- Forster F [113]
- Grunewald K [113]
- Kreysing JP [112]
- Kuehlbrandt W [112]
- Medalia O [112]
- Moeller A [112]
- Gil-carton D [110]
- Moores CA [110]
- Hopfner KP [108]
- Itoh Y [108]
- Ramakrishnan V [108]
- Sazanov LA [108]
- Nans A [107]
- Carter AP [106]
- Schur FKM [106]
- Barford D [105]
- Wang D [104]
- Fernandez-busnadiego R [102]
- Haselbach D [102]
Author by ORCID
- Kotecha A [319]
- Beckmann R [306]
- Pilhofer M [260]
- Raunser S [246]
- Scheres SHW [245]
- Plevka P [244]
- Schulman BA [218]
- Zhang P [210]
- Amunts A [209]
- Hummer G [206]
- Fuzik T [191]
- Beck M [191]
- Thoms M [186]
- Cramer P [180]
- Engel BD [178]
- Mahamid J [177]
- Ranson NA [173]
- Kuhlbrandt W [170]
- Plitzko JM [170]
- Novacek J [170]
- Huiskonen JT [166]
- Rappsilber J [159]
- Stahlberg H [158]
- Briggs JAG [158]
- Wilson DN [154]
- Welsch S [150]
- Denk T [148]
- Schoehn G [147]
- Goedert M [146]
- Hirst J [144]
- Pfeffer S [138]
- Hurt E [137]
- Bottcher B [132]
- Xu J [132]
- Steyaert J [131]
- Sachse C [128]
- Berninghausen O [128]
- Mclaughlin SH [124]
- Spikes TE [123]
- Walker JE [122]
- Murphy BJ [121]
- Cheng J [121]
- Montgomery MG [120]
- Weiss GL [119]
- Muller CW [119]
- Pardon E [115]
- Mills DJ [113]
- Urlaub H [113]
- Brown A [112]
- Boehringer D [111]
- Spahn CMT [110]
- Kreysing JP [110]
- Itoh Y [108]
- Greber BJ [107]
- Forster F [107]
- Moores CA [106]
- Carter AP [106]
- Baumeister W [105]
- Aricescu AR [103]
- Carrique L [102]
- Blaza JN [102]
- Ramakrishnan V [101]
- Dietz H [101]
- Flemming D [100]
- Dutzler R [100]
- Cusack S [100]
- Barford D [99]
- Hardwick SW [99]
- Yin Z [99]
- Grunewald K [99]
- Dienemann C [98]
- Plaschka C [98]
- Gil-carton D [98]
- Weixlbaumer A [97]
- Hopfner KP [97]
- Kosinski J [96]
- Pantucek R [96]
- Stuart DI [95]
- Bridges HR [94]
- Turonova B [94]
- Chirgadze DY [90]
- Cushing VI [90]
- Caston JR [90]
- Orlova EV [90]
- Kouba T [89]
- Leung MR [89]
- Effantin G [89]
- Lau B [89]
- Grange M [89]
- Schur FKM [89]
- Zhang X [88]
- Rosenthal PB [88]
- Lowe J [88]
- Siborova M [88]
- Sazanov LA [87]
- Mielke T [86]
- Malinauskas T [86]
- Haselbach D [86]
- Paulino C [85]
- Sazanov L [84]
Journal
- NAT COMMUN [3523]
- NATURE [1725]
- TO BE PUBLISHED [1231]
- PNAS [1135]
- BIORXIV [1084]
- NAT STRUCT MOL BIOL [1049]
- SCIENCE [1041]
- MOL CELL [861]
- SCI ADV [732]
- ELIFE [695]
- CELL [653]
- STRUCTURE [496]
- EMBO J [468]
- NUCLEIC ACIDS RES [461]
- ACTA CRYSTALLOGR D STRUCT BIOL [303]
- J MOL BIOL [239]
- COMMUN BIOL [226]
- CELL REP [219]
- NAT MICROBIOL [218]
- J VIROL [198]
- PLOS PATHOG [168]
- EMBO REP [161]
- J BIOL CHEM [161]
- NAT METHODS [152]
- J STRUCT BIOL [151]
- NAT CHEM BIOL [106]
- SCI REP [99]
- J CELL BIOL [95]
- NAT PLANTS [81]
- PROTEIN SCI [81]
- PLOS BIOL [79]
- PLOS ONE [76]
- DEV CELL [62]
- IUCRJ [54]
- MBIO [49]
- LIFE SCI ALLIANCE [47]
- ACS NANO [43]
- CELL HOST MICROBE [42]
- NAT CELL BIOL [41]
- J AM CHEM SOC [40]
- RES SQ [40]
- ACTA NEUROPATHOL [38]
- INT J MOL SCI [35]
- ISME J [35]
- COMMUN CHEM [34]
- J MED CHEM [34]
- CURR BIOL [32]
- NPJ VACCINES [32]
- FEBS J [30]
- J CELL SCI [30]
- FEBS LETT [28]
- J STRUCT BIOL X [27]
- BIOCHEM J [26]
- MOL MICROBIOL [26]
- ISCIENCE [25]
- FRONT MOL BIOSCI [24]
- NAT CATAL [24]
- VIRUSES [24]
- NEURON [23]
- BIOMOLECULES [22]
- VIROLOGY [22]
- ADV SCI [21]
- NAT MATER [21]
- NAT NANOTECHNOL [21]
- OPEN BIOL [21]
- CURR RES STRUCT BIOL [18]
- NAT CHEM [17]
- COMMUN MATER [16]
- NANOSCALE [16]
- NAT NEUROSCI [16]
- BIOCHIM BIOPHYS ACTA [15]
- CELL RES [15]
- J BACTERIOL [15]
- GENES DEV [14]
- INT J BIOL MACROMOL [14]
- NAT BIOTECHNOL [14]
- ANGEW CHEM INT ED ENGL [13]
- FRONT IMMUNOL [13]
- BLOOD [12]
- FRONT MICROBIOL [12]
- J GEN VIROL [12]
- MOL.BIOL.EVOL. [12]
- NANO LETTERS [12]
- BIOPHYS J [11]
- MICROLIFE [11]
- CELL REP PHYS SCI [10]
- FEBS OPEN BIO [10]
- MICROORGANISMS [10]
- MOL PHARMACOL [10]
- RNA [10]
- CELL DISCOV [9]
- PLANT CELL [9]
- ULTRAMICROSCOPY [9]
- IMMUNITY [8]
- PHILOS TRANS R SOC LOND, B, BIOL SCI [8]
- PLANT COMMUN. [8]
- DRUG DISCOV TODAY [7]
- MOL BIOL CELL [7]
- MOLECULES [7]
- MSPHERE [7]
Software
- RELION [6336]
- CRYOSPARC [4305]
- CTFFIND [1173]
- IMOD [730]
- GCTF [661]
- WARP [396]
- SPIDER [305]
- CHIMERA [271]
- DYNAMO [204]
- EMAN [165]
- PEET [141]
- PYTOM [133]
- IMAGIC [119]
- EMAN2 [109]
- UCSF CHIMERAX [109]
- COOT [108]
- SPHIRE [107]
- XMIPP [103]
- PHENIX [96]
- UCSF CHIMERA [93]
- CRYOLO [92]
- MATLAB [85]
- AV3 [82]
- CISTEM [72]
- FREALIGN [72]
- NOVACTF [66]
- TOM TOOLBOX [65]
- CTFPHASEFLIP [64]
- NOVASTA [62]
- ETOMO [60]
- STOPGAP [56]
- EMCLARITY [51]
- TOM [49]
- SITUS [44]
- MRC [43]
- AUTO3DEM [40]
- URO [40]
- IMAGIC, SPIDER [37]
- M [37]
- SPARX [34]
- APPION, SPIDER [32]
- PROTOMO [32]
- SPIDER, FREALIGN [31]
- CTFFIND3, RELION [30]
- SPRING [27]
- PRIISM/IVE [23]
- SIMPLE [23]
- SUBTOM [23]
- BSOFT [22]
- EMAN2, SPARX [22]
- SPIDER, APPION [22]
- O [21]
- IHRSR [20]
- IMOD, BSOFT, SPIDER, TOM, PACKAGE, MATLAB [20]
- ISOLDE [20]
- SCIPION [20]
- EMAN1 [18]
- IMOD, TOMO3D, PEET [18]
- J3DR [17]
- JALIGN [17]
- SPIDER, IMAGIC [17]
- CRYODRGN [16]
- EM3DR2 [16]
- IMAGIC, CUSTOM, SPIDER [16]
- MULTI-PATH SA [16]
- APPION, SPIDER, EMAN [15]
- CHIMERA, COOT [15]
- EMFIT [15]
- IMOD, DYNAMO [15]
- ARETOMO [14]
- CHIMERA, FLEX-EM [14]
- COMET [14]
- EMAN2, RELION [14]
- IMAGIC-5 [14]
- IPET, FETR, SPIDER, IMOD, EMAN, AND, EMAN2 [14]
- MDFF [14]
- IMAGIC-5, SPIDER [13]
- PHOELIX, SUPRIM [13]
- SERIALEM [13]
- AMIRA [12]
- CHIMERA, SITUS [12]
- DIREX [12]
- EMAN2, SPIDER, XMIPP [11]
- FOCUS [11]
- FREALIX [11]
- GAP [11]
- SIGNATURE, CTFFIND3, SPIDER, SPARX [11]
- SPIDER PACKAGE [11]
- SPIDER XMIPP [11]
- EMAN, XMIPP [10]
- EMAN2, RELION, 1.3 [10]
- FLEX-EM [10]
- PHOELIX [10]
- SPIDER, SPARX [10]
- AMIRAFPM [9]
- CHIMERA, MDFF [9]
- IMIRS [9]
- MRC, IMAGIC, SPIDER [9]
- SPIDER, EMAN [9]
- TOM, AV3 [9]
Microscope
- FEI TITAN KRIOS [9789]
- TFS KRIOS [4281]
- FEI TECNAI F20 [762]
- TFS GLACIOS [745]
- FEI POLARA 300 [621]
- FEI TALOS ARCTICA [597]
- FEI/PHILIPS CM200FEG [213]
- JEOL CRYO ARM 300 [177]
- FEI TECNAI 20 [167]
- FEI TECNAI F30 [149]
- FEI TECNAI 12 [111]
- FEI TITAN [99]
- JEOL 3200FSC [96]
- FEI TECNAI SPIRIT [83]
- JEOL 2200FS [75]
- FEI/PHILIPS CM300FEG/T [70]
- FEI TECNAI ARCTICA [52]
- JEOL 2010F [46]
- JEOL 1230 [38]
- TFS TALOS [37]
- JEOL CRYO ARM 200 [35]
- FEI/PHILIPS CM120T [32]
- JEOL 2100 [30]
- JEOL 1400 [28]
- FEI/PHILIPS CM200FEG/ST [26]
- JEOL 2100F [25]
- FEI/PHILIPS CM200T [24]
- JEOL 1200EXII [21]
- JEOL KYOTO-3000SFF [19]
- JEOL 3200FS [17]
- JEOL 4000 [17]
- TFS TUNDRA [16]
- ZEISS LIBRA120PLUS [16]
- JEOL 2200FSC [14]
- JEOL 3000SFF [14]
- OTHER [13]
- JEOL 1400/HR YPS FEG [11]
- JEOL 1200EX [10]
- FEI/PHILIPS CM12 [8]
- FEI/PHILIPS CM200FEG/UT [8]
- TFS TALOS F200C [8]
- FEI TECNAI 10 [7]
- TFS TALOS L120C [7]
- FEI/PHILIPS CM300FEG/ST [6]
- JEOL 2000EX [6]
- TFS TITAN THEMIS [6]
- JEOL 100CX [5]
- JEOL 4000EX [5]
- FEI/PHILIPS EM420 [3]
- JEOL 1200 [3]
- FEI/PHILIPS EM400 [2]
- JEOL 1010 [2]
- JEOL 2010 [2]
- JEOL 2010HC [2]
- JEOL 2010HT [2]
- JEOL 2010UHR [2]
- FEI TECNAI SPHERA [1]
- FEI/PHILIPS CM200FEG/SOPHIE [1]
- FEI/PHILIPS CM300FEG/HE [1]
- HITACHI EF2000 [1]
- HITACHI H-9500SD [1]
- HITACHI H7600 [1]
- JEOL 2000EXII [1]
- JEOL 2011 [1]
- ZEISS LEO912 [1]
Electron Source
- FIELD EMISSION GUN [18028]
- LAB6 [409]
- TUNGSTEN HAIRPIN [152]
- OTHER [59]
Film or detector model
- GATAN K2 SUMMIT 4K X 4K [3659]
- GATAN K3 BIOQUANTUM 6K X 4K [3384]
- GATAN K3 6K X 4K [2521]
- FEI FALCON IV 4K X 4K [1993]
- FEI FALCON III 4K X 4K [1827]
- GATAN K2 QUANTUM 4K X 4K [950]
- FEI FALCON II 4K X 4K [910]
- KODAK SO-163 FILM [750]
- TFS FALCON 4I 4K X 4K [646]
- GATAN ULTRASCAN 4000 4K X 4K [391]
- TVIPS TEMCAM-F416 4K X 4K [211]
- GATAN K3 BIOCONTINUUM 6K X 4K [192]
- OTHER [138]
- FEI EAGLE 4K X 4K [125]
- GATAN K2 4K X 4K [94]
- TVIPS TEMCAM-F415 4K X 4K [74]
- GATAN K2 BASE 4K X 4K [71]
- GENERIC GATAN 4K X 4K [68]
- GATAN ULTRASCAN 1000 2K X 2K [62]
- GENERIC CCD [59]
- GENERIC TVIPS 4K X 4K [55]
- FEI FALCON I 4K X 4K [40]
- GATAN MULTISCAN [37]
- TVIPS TEMCAM-F224 2K X 2K [30]
- TVIPS TEMCAM-F816 8K X 8K [27]
- FEI EAGLE 2K X 2K [25]
- GENERIC GATAN [25]
- DIRECT ELECTRON DE-20 5K X 3K [23]
- FEI CETA 4K X 4K [17]
- DECTRIS SINGLA 1K X 1K [11]
- DIRECT ELECTRON DE-64 8K X 8K [11]
- KODAK 4489 FILM [11]
- GATAN K2 IS 4K X 4K [10]
- GENERIC CCD 2K X 2K [10]
- GENERIC GATAN 2K X 2K [10]
- GENERIC TVIPS [10]
- AGFA SCIENTA FILM [8]
- GATAN ORIUS SC1000 4K X 2.7K [7]
- GENERIC FILM [7]
- TVIPS TEMCAM-F216 2K X 2K [7]
- DECTRIS ELA 1K X 0.5K [6]
- DECTRIS ARINA 0.2K X 0.2K [5]
- DIRECT ELECTRON APOLLO 4K X 4K [4]
- GATAN ORIUS SC200 2K X 2K [4]
- DIRECT ELECTRON DE-12 4K X 3K [2]
- DIRECT ELECTRON DE-16 4K X 4K [2]
- GATAN ULTRASCAN 10000 10K X 10K [2]
- GENERIC TVIPS 2K X 2K [2]
- SIA 15C 3K X 3K [2]
- DIRECT ELECTRON DE-10 5K X 4K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- PDB [18582]
- UniProt [10197]
- PDBe-Kb [9433]
- AlphaFold DB [9067]
- InterPro [7609]
- Gene Ontology [7325]
- Pfam [6658]
- ChEBI [5451]
- ChEMBL [4943]
- DrugBank [4866]
- Complex Portal [2893]
- EMPIAR [2272]
- SCOP2 [291]
- CATH [132]
Resolution: 2.36 Å
EM Method: Single-particle
Fitted PDBs: 9hig
Q-score: 0.561
Singh V, Godsora BKJ, Emmerich AG, Majumdar S, Sanyal S
To Be Published
Resolution: 3.6 Å
EM Method: Single-particle
Vega-Gutierrez C, Parraga-Picanol J, Sanchez-Valls I, Soto D, Herguedas B
To Be Published
Resolution: 4.44 Å
EM Method: Single-particle
Vega-Gutierrez C, Parraga-Picanol J, Sanchez-Valls I, Soto D, Herguedas B
To Be Published
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 9ru6
Q-score: 0.439
Singh V, Whitford PC, Khawaja A, Rorbach J
To Be Published
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9ruf
Q-score: 0.469
Zampieri V, Priddey A, Kosmoliaptsis V, Marquez JA
To Be Published
Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 9rug
Q-score: 0.487
Zampieri V, Priddey A, Linares R, Kosmoliaptsis V, Marquez JA
To Be Published
Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 9ruh
Q-score: 0.522
Zampieri V, Priddey A, Kosmoliaptsis V, Marquez JA
To Be Published
Resolution: 3.56 Å
EM Method: Single-particle
Fitted PDBs: 9s0y
Q-score: 0.493
Stefanik Sobotkova A, Cienikova Z, Mironova Y, Fuzik T, Plevka P, Hlavenkova Z, Novacek J
To Be Published
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9s5j
Q-score: 0.476
Stefanik Sobotkova A, Cienikova Z, Mironova Y, Fuzik T, Plevka P, Novacek J, Hlavenkova Z
To Be Published
Stefanik Sobotkova A, Cienikova Z, Mironova Y, Fuzik T, Plevka P, Novacek J, Hlavenkova Z
To Be Published
Filter By
Current Database
- EMDB [18648]
Current status
- REL [18648]
Sample type
- Complex [13555]
- Protein [11930]
- Ligand [5730]
- Sample [2359]
- RNA [2091]
- Virus [1543]
- DNA [1196]
- Cellular component [1161]
- Cell [1039]
- Tissue [178]
- Other [64]
- Em label [2]
Organism
- Homo sapiens [5420]
- Escherichia coli [1410]
- Saccharomyces cerevisiae [1266]
- Synthetic construct [1131]
- Mus musculus [929]
- Escherichia coli [530]
- Bos taurus [462]
- Severe acute respiratory syndrome coronavirus [323]
- Saccharomyces cerevisiae [281]
- Oryctolagus cuniculus [278]
- Rattus norvegicus [265]
- Sus scrofa [259]
- Chlamydomonas reinhardtii [204]
- Lama glama [203]
- Drosophila melanogaster [187]
- Xenopus laevis [177]
- Human immunodeficiency virus 1 [171]
- Chaetomium thermophilum [124]
- Mycolicibacterium smegmatis [122]
- Escherichia coli [111]
- Ovis aries [100]
- Caenorhabditis elegans [98]
- Gallus gallus [98]
- Arabidopsis thaliana [90]
- Chaetomium thermophilum [88]
- Mycoplasma pneumoniae [87]
- Synechocystis sp. pcc 6803 [83]
- Vicugna pacos [81]
- Enterobacteria phage t4 [79]
- Staphylococcus aureus [79]
- Mycobacterium tuberculosis [75]
- Sus scrofa [71]
- Bacillus subtilis [67]
- Pseudomonas phage phi6 [65]
- Bacillus subtilis [62]
- Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [59]
- Polytomella sp. pringsheim 198.80 [59]
- Schizosaccharomyces pombe [57]
- Escherichia coli [56]
- Mycobacterium tuberculosis [56]
- Hepatitis b virus [54]
- Dictyostelium discoideum [52]
- Trypanosoma brucei [52]
- Pseudomonas aeruginosa [51]
- Neurospora crassa [49]
- Plasmodium falciparum [49]
- Thermus thermophilus [48]
- Spinacia oleracea [48]
- Thermus thermophilus [47]
- Torpedo marmorata [47]
- Staphylococcus phage 812 [45]
- Salmonella enterica [45]
- Canis lupus [45]
- Yarrowia lipolytica [44]
- Methanothermobacter marburgensis [43]
- Tetrahymena thermophila [43]
- Influenza a virus [40]
- Mycolicibacterium smegmatis [40]
- Potato virus y [39]
- Klebsiella pneumoniae [39]
- Shigella flexneri [39]
- Clostridium botulinum [38]
- Photorhabdus luminescens [35]
- Aequorea victoria [34]
- Human herpesvirus 1 [33]
- Simian virus 40 [33]
- Sinapis alba [33]
- Pseudomonas aeruginosa [32]
- Campylobacter jejuni [31]
- Plasmodium falciparum [31]
- Amanita phalloides [31]
- Yersinia entomophaga [31]
- Dna molecule [30]
- Saccharomyces cerevisiae [30]
- Apis mellifera [30]
- Rous sarcoma virus [29]
- Tobacco mosaic virus [29]
- Thermoplasma acidophilum [29]
- Equus caballus [29]
- Serratia entomophila [28]
- Pyrococcus furiosus [27]
- Clostridioides difficile [26]
- Candidatus arthromitus sp. sfb-mouse-nl [26]
- Aquifex aeolicus [26]
- Staphylococcus aureus [26]
- (no species) [25]
- Streptococcus pneumoniae [25]
- Dictyostelium discoideum [25]
- Influenza a virus [25]
- Halothiobacillus neapolitanus [25]
- Unidentified adenovirus [24]
- Escherichia phage ms2 [24]
- Pseudomonas phage jbd30 [24]
- Streptococcus thermophilus [24]
- Kluyveromyces lactis [24]
- Myxococcus xanthus [24]
- Staphylococcus phage 812k1/420 [24]
- Brassica oleracea [24]
- Streptomyces coelicolor [23]
- Human herpesvirus 1 [23]
EM Method
- Single-particle [14653]
- Subtomogram averaging [1780]
- Helical reconstruction [1142]
- Tomography [1029]
- Electron Crystallography [44]
Resolution
- < 2Å [181]
- ≥ 2Å and < 3Å [3515]
- ≥ 3Å and < 4Å [6280]
- ≥ 4Å and < 5Å [1862]
- ≥ 5Å and < 6Å [476]
- ≥ 6Å and < 8Å [1111]
- ≥ 8Å and < 12Å [1235]
- ≥ 12Å and < 16Å [575]
- ≥ 16Å and < 20Å [521]
- ≥ 20Å and < 30Å [1072]
- ≥ 30Å [766]
Model molecular weight
- 0-50 kDa [198]
- 50-100 kDa [524]
- 100-250 kDa [2619]
- 250-500 kDa [2075]
- 500-1000 kDa [1602]
- 1-2 MDa [1094]
- 2-5 MDa [983]
- 5-10 MDa [226]
- > 10 MDa [146]
Release Date
- 2026 [1757]
- 2025 [2857]
- 2024 [2683]
- 2023 [2152]
- 2022 [1849]
- 2021 [1641]
- 2020 [1281]
- 2019 [849]
- 2018 [521]
- 2017 [461]
- 2016 [535]
- 2015 [333]
- 2014 [291]
- 2013 [271]
- 2012 [280]
- 2011 [165]
- 2010 [130]
- 2009 [141]
- 2008 [60]
- 2007 [134]
- 2006 [126]
- 2005 [45]
- 2004 [34]
- 2003 [44]
- 2002 [8]
Author by name
- Beckmann R [494]
- Cramer P [371]
- Berninghausen O [357]
- Kotecha A [345]
- Scheres SHW [330]
- Pilhofer M [317]
- Baumeister W [295]
- Beck M [295]
- Plevka P [261]
- Raunser S [253]
- Zhang P [245]
- Novacek J [234]
- Schulman BA [233]
- Urlaub H [233]
- Amunts A [231]
- Plitzko JM [227]
- Zhang X [224]
- Dienemann C [217]
- Briggs JAG [212]
- Fuzik T [210]
- Cheng J [209]
- Hummer G [208]
- Huiskonen JT [205]
- Murzin AG [205]
- Ranson NA [204]
- Stuart DI [197]
- Goedert M [196]
- Becker T [194]
- Kuhlbrandt W [191]
- Mahamid J [191]
- Rappsilber J [191]
- Thoms M [187]
- Engel BD [185]
- Spahn CMT [184]
- Mielke T [183]
- Stahlberg H [180]
- Hurt E [179]
- Stark H [178]
- Xu J [178]
- Welsch S [172]
- Wilson DN [163]
- Pfeffer S [161]
- Zhang Z [161]
- Schoehn G [160]
- Beck F [159]
- Ban N [157]
- Spikes TE [157]
- Walker JE [156]
- Hirst J [155]
- Montgomery MG [154]
- Denk T [149]
- Turonova B [149]
- Murphy BJ [148]
- Saibil HR [141]
- Lovestam S [139]
- Bottcher B [138]
- Sachse C [138]
- Boehringer D [136]
- Burger J [135]
- Clare DK [132]
- Steyaert J [132]
- Mclaughlin SH [130]
- Greber BJ [127]
- Rosenthal PB [125]
- Muller CW [122]
- Aricescu AR [121]
- Dybkov O [120]
- Hardwick SW [120]
- Aibara S [119]
- Muench SP [119]
- Pardon E [119]
- Weiss GL [119]
- Mann M [118]
- Mills DJ [118]
- Kater L [117]
- Blaza JN [116]
- Carrique L [116]
- Chirgadze DY [114]
- Brown A [113]
- Cusack S [113]
- Dietz H [113]
- Forster F [113]
- Grunewald K [113]
- Kreysing JP [112]
- Kuehlbrandt W [112]
- Medalia O [112]
- Moeller A [112]
- Gil-carton D [110]
- Moores CA [110]
- Hopfner KP [108]
- Itoh Y [108]
- Ramakrishnan V [108]
- Sazanov LA [108]
- Nans A [107]
- Carter AP [106]
- Schur FKM [106]
- Barford D [105]
- Wang D [104]
- Fernandez-busnadiego R [102]
- Haselbach D [102]
Author by ORCID
- Kotecha A [319]
- Beckmann R [306]
- Pilhofer M [260]
- Raunser S [246]
- Scheres SHW [245]
- Plevka P [244]
- Schulman BA [218]
- Zhang P [210]
- Amunts A [209]
- Hummer G [206]
- Fuzik T [191]
- Beck M [191]
- Thoms M [186]
- Cramer P [180]
- Engel BD [178]
- Mahamid J [177]
- Ranson NA [173]
- Kuhlbrandt W [170]
- Plitzko JM [170]
- Novacek J [170]
- Huiskonen JT [166]
- Rappsilber J [159]
- Stahlberg H [158]
- Briggs JAG [158]
- Wilson DN [154]
- Welsch S [150]
- Denk T [148]
- Schoehn G [147]
- Goedert M [146]
- Hirst J [144]
- Pfeffer S [138]
- Hurt E [137]
- Bottcher B [132]
- Xu J [132]
- Steyaert J [131]
- Sachse C [128]
- Berninghausen O [128]
- Mclaughlin SH [124]
- Spikes TE [123]
- Walker JE [122]
- Murphy BJ [121]
- Cheng J [121]
- Montgomery MG [120]
- Weiss GL [119]
- Muller CW [119]
- Pardon E [115]
- Mills DJ [113]
- Urlaub H [113]
- Brown A [112]
- Boehringer D [111]
- Spahn CMT [110]
- Kreysing JP [110]
- Itoh Y [108]
- Greber BJ [107]
- Forster F [107]
- Moores CA [106]
- Carter AP [106]
- Baumeister W [105]
- Aricescu AR [103]
- Carrique L [102]
- Blaza JN [102]
- Ramakrishnan V [101]
- Dietz H [101]
- Flemming D [100]
- Dutzler R [100]
- Cusack S [100]
- Barford D [99]
- Hardwick SW [99]
- Yin Z [99]
- Grunewald K [99]
- Dienemann C [98]
- Plaschka C [98]
- Gil-carton D [98]
- Weixlbaumer A [97]
- Hopfner KP [97]
- Kosinski J [96]
- Pantucek R [96]
- Stuart DI [95]
- Bridges HR [94]
- Turonova B [94]
- Chirgadze DY [90]
- Cushing VI [90]
- Caston JR [90]
- Orlova EV [90]
- Kouba T [89]
- Leung MR [89]
- Effantin G [89]
- Lau B [89]
- Grange M [89]
- Schur FKM [89]
- Zhang X [88]
- Rosenthal PB [88]
- Lowe J [88]
- Siborova M [88]
- Sazanov LA [87]
- Mielke T [86]
- Malinauskas T [86]
- Haselbach D [86]
- Paulino C [85]
- Sazanov L [84]
Journal
- NAT COMMUN [3523]
- NATURE [1725]
- TO BE PUBLISHED [1231]
- PNAS [1135]
- BIORXIV [1084]
- NAT STRUCT MOL BIOL [1049]
- SCIENCE [1041]
- MOL CELL [861]
- SCI ADV [732]
- ELIFE [695]
- CELL [653]
- STRUCTURE [496]
- EMBO J [468]
- NUCLEIC ACIDS RES [461]
- ACTA CRYSTALLOGR D STRUCT BIOL [303]
- J MOL BIOL [239]
- COMMUN BIOL [226]
- CELL REP [219]
- NAT MICROBIOL [218]
- J VIROL [198]
- PLOS PATHOG [168]
- EMBO REP [161]
- J BIOL CHEM [161]
- NAT METHODS [152]
- J STRUCT BIOL [151]
- NAT CHEM BIOL [106]
- SCI REP [99]
- J CELL BIOL [95]
- NAT PLANTS [81]
- PROTEIN SCI [81]
- PLOS BIOL [79]
- PLOS ONE [76]
- DEV CELL [62]
- IUCRJ [54]
- MBIO [49]
- LIFE SCI ALLIANCE [47]
- ACS NANO [43]
- CELL HOST MICROBE [42]
- NAT CELL BIOL [41]
- J AM CHEM SOC [40]
- RES SQ [40]
- ACTA NEUROPATHOL [38]
- INT J MOL SCI [35]
- ISME J [35]
- COMMUN CHEM [34]
- J MED CHEM [34]
- CURR BIOL [32]
- NPJ VACCINES [32]
- FEBS J [30]
- J CELL SCI [30]
- FEBS LETT [28]
- J STRUCT BIOL X [27]
- BIOCHEM J [26]
- MOL MICROBIOL [26]
- ISCIENCE [25]
- FRONT MOL BIOSCI [24]
- NAT CATAL [24]
- VIRUSES [24]
- NEURON [23]
- BIOMOLECULES [22]
- VIROLOGY [22]
- ADV SCI [21]
- NAT MATER [21]
- NAT NANOTECHNOL [21]
- OPEN BIOL [21]
- CURR RES STRUCT BIOL [18]
- NAT CHEM [17]
- COMMUN MATER [16]
- NANOSCALE [16]
- NAT NEUROSCI [16]
- BIOCHIM BIOPHYS ACTA [15]
- CELL RES [15]
- J BACTERIOL [15]
- GENES DEV [14]
- INT J BIOL MACROMOL [14]
- NAT BIOTECHNOL [14]
- ANGEW CHEM INT ED ENGL [13]
- FRONT IMMUNOL [13]
- BLOOD [12]
- FRONT MICROBIOL [12]
- J GEN VIROL [12]
- MOL.BIOL.EVOL. [12]
- NANO LETTERS [12]
- BIOPHYS J [11]
- MICROLIFE [11]
- CELL REP PHYS SCI [10]
- FEBS OPEN BIO [10]
- MICROORGANISMS [10]
- MOL PHARMACOL [10]
- RNA [10]
- CELL DISCOV [9]
- PLANT CELL [9]
- ULTRAMICROSCOPY [9]
- IMMUNITY [8]
- PHILOS TRANS R SOC LOND, B, BIOL SCI [8]
- PLANT COMMUN. [8]
- DRUG DISCOV TODAY [7]
- MOL BIOL CELL [7]
- MOLECULES [7]
- MSPHERE [7]
Software
- RELION [6336]
- CRYOSPARC [4305]
- CTFFIND [1173]
- IMOD [730]
- GCTF [661]
- WARP [396]
- SPIDER [305]
- CHIMERA [271]
- DYNAMO [204]
- EMAN [165]
- PEET [141]
- PYTOM [133]
- IMAGIC [119]
- EMAN2 [109]
- UCSF CHIMERAX [109]
- COOT [108]
- SPHIRE [107]
- XMIPP [103]
- PHENIX [96]
- UCSF CHIMERA [93]
- CRYOLO [92]
- MATLAB [85]
- AV3 [82]
- CISTEM [72]
- FREALIGN [72]
- NOVACTF [66]
- TOM TOOLBOX [65]
- CTFPHASEFLIP [64]
- NOVASTA [62]
- ETOMO [60]
- STOPGAP [56]
- EMCLARITY [51]
- TOM [49]
- SITUS [44]
- MRC [43]
- AUTO3DEM [40]
- URO [40]
- IMAGIC, SPIDER [37]
- M [37]
- SPARX [34]
- APPION, SPIDER [32]
- PROTOMO [32]
- SPIDER, FREALIGN [31]
- CTFFIND3, RELION [30]
- SPRING [27]
- PRIISM/IVE [23]
- SIMPLE [23]
- SUBTOM [23]
- BSOFT [22]
- EMAN2, SPARX [22]
- SPIDER, APPION [22]
- O [21]
- IHRSR [20]
- IMOD, BSOFT, SPIDER, TOM, PACKAGE, MATLAB [20]
- ISOLDE [20]
- SCIPION [20]
- EMAN1 [18]
- IMOD, TOMO3D, PEET [18]
- J3DR [17]
- JALIGN [17]
- SPIDER, IMAGIC [17]
- CRYODRGN [16]
- EM3DR2 [16]
- IMAGIC, CUSTOM, SPIDER [16]
- MULTI-PATH SA [16]
- APPION, SPIDER, EMAN [15]
- CHIMERA, COOT [15]
- EMFIT [15]
- IMOD, DYNAMO [15]
- ARETOMO [14]
- CHIMERA, FLEX-EM [14]
- COMET [14]
- EMAN2, RELION [14]
- IMAGIC-5 [14]
- IPET, FETR, SPIDER, IMOD, EMAN, AND, EMAN2 [14]
- MDFF [14]
- IMAGIC-5, SPIDER [13]
- PHOELIX, SUPRIM [13]
- SERIALEM [13]
- AMIRA [12]
- CHIMERA, SITUS [12]
- DIREX [12]
- EMAN2, SPIDER, XMIPP [11]
- FOCUS [11]
- FREALIX [11]
- GAP [11]
- SIGNATURE, CTFFIND3, SPIDER, SPARX [11]
- SPIDER PACKAGE [11]
- SPIDER XMIPP [11]
- EMAN, XMIPP [10]
- EMAN2, RELION, 1.3 [10]
- FLEX-EM [10]
- PHOELIX [10]
- SPIDER, SPARX [10]
- AMIRAFPM [9]
- CHIMERA, MDFF [9]
- IMIRS [9]
- MRC, IMAGIC, SPIDER [9]
- SPIDER, EMAN [9]
- TOM, AV3 [9]
Microscope
- FEI TITAN KRIOS [9789]
- TFS KRIOS [4281]
- FEI TECNAI F20 [762]
- TFS GLACIOS [745]
- FEI POLARA 300 [621]
- FEI TALOS ARCTICA [597]
- FEI/PHILIPS CM200FEG [213]
- JEOL CRYO ARM 300 [177]
- FEI TECNAI 20 [167]
- FEI TECNAI F30 [149]
- FEI TECNAI 12 [111]
- FEI TITAN [99]
- JEOL 3200FSC [96]
- FEI TECNAI SPIRIT [83]
- JEOL 2200FS [75]
- FEI/PHILIPS CM300FEG/T [70]
- FEI TECNAI ARCTICA [52]
- JEOL 2010F [46]
- JEOL 1230 [38]
- TFS TALOS [37]
- JEOL CRYO ARM 200 [35]
- FEI/PHILIPS CM120T [32]
- JEOL 2100 [30]
- JEOL 1400 [28]
- FEI/PHILIPS CM200FEG/ST [26]
- JEOL 2100F [25]
- FEI/PHILIPS CM200T [24]
- JEOL 1200EXII [21]
- JEOL KYOTO-3000SFF [19]
- JEOL 3200FS [17]
- JEOL 4000 [17]
- TFS TUNDRA [16]
- ZEISS LIBRA120PLUS [16]
- JEOL 2200FSC [14]
- JEOL 3000SFF [14]
- OTHER [13]
- JEOL 1400/HR YPS FEG [11]
- JEOL 1200EX [10]
- FEI/PHILIPS CM12 [8]
- FEI/PHILIPS CM200FEG/UT [8]
- TFS TALOS F200C [8]
- FEI TECNAI 10 [7]
- TFS TALOS L120C [7]
- FEI/PHILIPS CM300FEG/ST [6]
- JEOL 2000EX [6]
- TFS TITAN THEMIS [6]
- JEOL 100CX [5]
- JEOL 4000EX [5]
- FEI/PHILIPS EM420 [3]
- JEOL 1200 [3]
- FEI/PHILIPS EM400 [2]
- JEOL 1010 [2]
- JEOL 2010 [2]
- JEOL 2010HC [2]
- JEOL 2010HT [2]
- JEOL 2010UHR [2]
- FEI TECNAI SPHERA [1]
- FEI/PHILIPS CM200FEG/SOPHIE [1]
- FEI/PHILIPS CM300FEG/HE [1]
- HITACHI EF2000 [1]
- HITACHI H-9500SD [1]
- HITACHI H7600 [1]
- JEOL 2000EXII [1]
- JEOL 2011 [1]
- ZEISS LEO912 [1]
Electron Source
- FIELD EMISSION GUN [18028]
- LAB6 [409]
- TUNGSTEN HAIRPIN [152]
- OTHER [59]
Film or detector model
- GATAN K2 SUMMIT 4K X 4K [3659]
- GATAN K3 BIOQUANTUM 6K X 4K [3384]
- GATAN K3 6K X 4K [2521]
- FEI FALCON IV 4K X 4K [1993]
- FEI FALCON III 4K X 4K [1827]
- GATAN K2 QUANTUM 4K X 4K [950]
- FEI FALCON II 4K X 4K [910]
- KODAK SO-163 FILM [750]
- TFS FALCON 4I 4K X 4K [646]
- GATAN ULTRASCAN 4000 4K X 4K [391]
- TVIPS TEMCAM-F416 4K X 4K [211]
- GATAN K3 BIOCONTINUUM 6K X 4K [192]
- OTHER [138]
- FEI EAGLE 4K X 4K [125]
- GATAN K2 4K X 4K [94]
- TVIPS TEMCAM-F415 4K X 4K [74]
- GATAN K2 BASE 4K X 4K [71]
- GENERIC GATAN 4K X 4K [68]
- GATAN ULTRASCAN 1000 2K X 2K [62]
- GENERIC CCD [59]
- GENERIC TVIPS 4K X 4K [55]
- FEI FALCON I 4K X 4K [40]
- GATAN MULTISCAN [37]
- TVIPS TEMCAM-F224 2K X 2K [30]
- TVIPS TEMCAM-F816 8K X 8K [27]
- FEI EAGLE 2K X 2K [25]
- GENERIC GATAN [25]
- DIRECT ELECTRON DE-20 5K X 3K [23]
- FEI CETA 4K X 4K [17]
- DECTRIS SINGLA 1K X 1K [11]
- DIRECT ELECTRON DE-64 8K X 8K [11]
- KODAK 4489 FILM [11]
- GATAN K2 IS 4K X 4K [10]
- GENERIC CCD 2K X 2K [10]
- GENERIC GATAN 2K X 2K [10]
- GENERIC TVIPS [10]
- AGFA SCIENTA FILM [8]
- GATAN ORIUS SC1000 4K X 2.7K [7]
- GENERIC FILM [7]
- TVIPS TEMCAM-F216 2K X 2K [7]
- DECTRIS ELA 1K X 0.5K [6]
- DECTRIS ARINA 0.2K X 0.2K [5]
- DIRECT ELECTRON APOLLO 4K X 4K [4]
- GATAN ORIUS SC200 2K X 2K [4]
- DIRECT ELECTRON DE-12 4K X 3K [2]
- DIRECT ELECTRON DE-16 4K X 4K [2]
- GATAN ULTRASCAN 10000 10K X 10K [2]
- GENERIC TVIPS 2K X 2K [2]
- SIA 15C 3K X 3K [2]
- DIRECT ELECTRON DE-10 5K X 4K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- PDB [18582]
- UniProt [10197]
- PDBe-Kb [9433]
- AlphaFold DB [9067]
- InterPro [7609]
- Gene Ontology [7325]
- Pfam [6658]
- ChEBI [5451]
- ChEMBL [4943]
- DrugBank [4866]
- Complex Portal [2893]
- EMPIAR [2272]
- SCOP2 [291]
- CATH [132]
