Edit your search query here and hit Return to execute it:
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Filter By

Current Database

  • EMDB [78]

Current status

  • REL [78]

Sample type

  • Virus [74]
  • Protein [64]
  • Ligand [14]
  • Complex [9]

Organism

  • Enterovirus d [27]
  • Eastern equine encephalitis virus [15]
  • Homo sapiens [10]
  • Fako virus [7]
  • Mus musculus [5]
  • Rhinovirus b [4]
  • Pseudoalteromonas phage tw1 [4]
  • Zika virus [3]
  • Zika virus [3]
  • Faustovirus [2]
  • Eastern equine encephalitis virus [2]
  • Scylla serrata reovirus sz-2007 [2]
  • Rhinovirus c [2]
  • Usutu virus [2]
  • Venezuelan equine encephalitis virus [1]
  • Dengue virus [1]
  • Wenzhou tombus-like virus 18 [1]
  • Enterovirus a [1]
  • Culiseta melanura [1]
  • Recovirus a [1]
  • Staphylococcus virus 80alpha [1]
  • Mayaro virus [1]

EM Method

  • Single-particle [78]

Resolution

  • ≥ 2Å and < 3Å [15]
  • ≥ 3Å and < 4Å [30]
  • ≥ 4Å and < 5Å [5]
  • ≥ 5Å and < 6Å [8]
  • ≥ 6Å and < 8Å [5]
  • ≥ 8Å and < 12Å [5]
  • ≥ 12Å and < 16Å [3]
  • ≥ 16Å and < 20Å [2]
  • ≥ 20Å and < 30Å [4]

Model molecular weight

  • 250-500 kDa [4]
  • 500-1000 kDa [3]
  • 2-5 MDa [1]
  • 5-10 MDa [27]
  • > 10 MDa [17]

Release Date

  • 2025 [2]
  • 2023 [6]
  • 2022 [9]
  • 2021 [2]
  • 2020 [5]
  • 2019 [16]
  • 2018 [25]
  • 2017 [7]
  • 2016 [6]

Author by name

  • Rossmann MG [56]
  • Klose T [34]
  • Buda G [33]
  • Liu Y [31]
  • Van Kuppeveld Fjm [25]
  • Van Vliet Alw [25]
  • Kuhn RJ [24]
  • Jiang W [22]
  • Sheng J [19]
  • Klimstra WB [11]
  • Sun C [11]
  • Diamond MS [10]
  • Kaelber JT [10]
  • Chen CL [9]
  • Auguste AJ [8]
  • Chen C-L [8]
  • Chiu W [8]
  • Crowe Jr Je [8]
  • Sirohi D [8]
  • Kim AS [7]
  • Weaver SC [7]
  • Williamson LE [7]
  • Baggen J [6]
  • Lyoo H [6]
  • Meijer A [6]
  • Overduin P [6]
  • Roberts RW [6]
  • Thibaut HJ [6]
  • Wahedi M [6]
  • De Bruin Jw [6]
  • Bailey K [5]
  • Bandyopadhyay A [5]
  • Fokine A [5]
  • Julander JG [5]
  • Miller AS [5]
  • Bochkov YA [4]
  • Cho BC [4]
  • Dong Y [4]
  • Hardies SC [4]
  • Hasan SS [4]
  • Long F [4]
  • Sevvana M [4]
  • Smith TJ [4]
  • Wang Z [4]
  • Xu Z [4]
  • Chen Z [3]
  • Gao Y [3]
  • He J [3]
  • Liu S [3]
  • Weng S [3]
  • Zhang Q [3]
  • Baker ML [2]
  • Benamar S [2]
  • Bombardi R [2]
  • Colson P [2]
  • Fang Q [2]
  • Fernandez E [2]
  • Fu J [2]
  • Georgiev IS [2]
  • Gern JE [2]
  • Gilliland Jr T [2]
  • Hill MG [2]
  • Hollerbach A [2]
  • Jia X [2]
  • Khare B [2]
  • Kose N [2]
  • La Scola B [2]
  • Li K [2]
  • Palmenberg AC [2]
  • Pierson TC [2]
  • Reteno DG [2]
  • Setliff I [2]
  • Sun L [2]
  • Sun Y [2]
  • Trivette A [2]
  • Vogt MR [2]
  • Watters K [2]
  • Xu H [2]
  • A Dowd K [1]
  • Aleshnick M [1]
  • Beutler N [1]
  • Bryan A [1]
  • Burton DR [1]
  • Chen F [1]
  • Chen RE [1]
  • Chmielewski D [1]
  • Christie GE [1]
  • Cong Y [1]
  • Crowe JE [1]
  • D Speer S [1]
  • Davidson E [1]
  • Dearborn AD [1]
  • Dokland T [1]
  • Doranz BJ [1]
  • Dowd AD [1]
  • Doyle M [1]
  • Fan C [1]
  • Gao YZ [1]
  • Govero J [1]
  • Hill RLL [1]

Author by ORCID

  • Klose T [34]
  • Van Kuppeveld Fjm [25]
  • Liu Y [25]
  • Jiang W [19]
  • Kuhn RJ [19]
  • Chen CL [9]
  • Kaelber JT [8]
  • Crowe Jr Je [8]
  • Kim AS [7]
  • Thibaut HJ [6]
  • Lyoo H [6]
  • Sirohi D [6]
  • Auguste AJ [6]
  • Baggen J [6]
  • Chiu W [6]
  • Bandyopadhyay A [5]
  • Williamson LE [4]
  • Bochkov YA [4]
  • Bailey K [3]
  • Julander JG [3]
  • Sevvana M [3]
  • Colson P [2]
  • Zhang Q [2]
  • La Scola B [2]
  • Pierson TC [2]
  • Vogt MR [2]
  • Bombardi R [2]
  • Khare B [2]
  • Fu J [2]
  • Fang Q [2]
  • Jia X [2]
  • Sun Y [2]
  • Setliff I [2]
  • Aleshnick M [1]
  • Dokland T [1]
  • Whitener BM [1]
  • Weaver S [1]
  • Ku Z [1]
  • Stagg SM [1]
  • Parvate AD [1]
  • Crowe JE [1]
  • Huang Z [1]
  • Zheng A [1]
  • Ye X [1]
  • Kizziah JL [1]
  • Lai YC [1]
  • Chmielewski D [1]
  • Diamond MS [1]
  • Parren M [1]
  • Dearborn AD [1]
  • Larman B [1]
  • Beutler N [1]
  • A Dowd K [1]
  • Jin J [1]
  • Klenow L [1]
  • Williams EP [1]
  • Chen C-L [1]

Journal

  • PNAS [43]
  • STRUCTURE [11]
  • NAT COMMUN [9]
  • TO BE PUBLISHED [3]
  • J VIROL [2]
  • PLOS PATHOG [2]
  • SCI IMMUNOL [2]
  • SCIENCE [2]
  • VIRUSES [2]
  • J VIROL METHODS [1]
  • NAT STRUCT MOL BIOL [1]
  • NOT PUBLISHED [1]

Software

  • JSPR [78]
  • RELION [40]
  • CTFFIND [6]
  • CISTEM [3]
  • J3DR [2]
  • CRYOSPARC [1]
  • FITCTF2.PY [1]
  • GCTF [1]
  • SCIPION [1]

Microscope

  • FEI TITAN KRIOS [70]
  • JEOL 3200FSC [8]

Electron Source

  • FIELD EMISSION GUN [78]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [49]
  • GATAN K3 BIOQUANTUM 6K X 4K [8]
  • DIRECT ELECTRON DE-20 5K X 3K [7]
  • GATAN ULTRASCAN 4000 4K X 4K [4]
  • FEI FALCON II 4K X 4K [3]
  • GATAN K3 6K X 4K [3]
  • OTHER [3]
  • DIRECT ELECTRON DE-16 4K X 4K [1]

External links

  • PDB [78]
  • UniProt [51]
  • PDBe-Kb [43]
  • InterPro [38]
  • Gene Ontology [36]
  • CATH [20]
  • AlphaFold DB [18]
  • ChEBI [14]
  • ChEMBL [14]
  • DrugBank [9]
  • SCOP2 [3]
  • EMPIAR [2]
  • Pfam [2]
Sort by: Download
Showing 1 - 10 of 78. Page 1 of 8
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EMD-43507
Download Map
3D View
Cryo-EM structure of SINV/EEEV in complex with a potently neutralizing intact human antibody EEEV-373
CryoEM
Release date: June 11, 2025
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8vsv
Q-score: 0.385

Bandyopadhyay A, Williamson LE, Sirohi D, Bailey K, Gilliland Jr T, Klose T, Buda G, Trivette A, Sun C, Julander JG, Klimstra WB, Crowe Jr JE, Kuhn RJ

Nat Commun (2025) 16 pp. 7716-7716 [ DOI: doi:10.1038/s41467-025-60505-x Pubmed: 40830099 ]

EMD-43980
Download Map
3D View
Cryo-EM structure of SINV/EEEV in complex with a potently neutralizing human antibody IgG EEEV-373
CryoEM
Release date: June 11, 2025
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 9ay1
Q-score: 0.171

Bandyopadhyay A, Williamson LE, Sirohi D, Bailey K, Gilliland Jr T, Klose T, Buda G, Trivette A, Sun C, Julander JG, Klimstra WB, Crowe Jr JE, Kuhn RJ

Nat Commun (2025) 16 pp. 7716-7716 [ DOI: doi:10.1038/s41467-025-60505-x Pubmed: 40830099 ]

EMD-33403
Download Map
3D View
Raw data
EMPIAR-11616
3.1 Angstrom cryoEM icosahedral reconstruction of mud crab reovirus
CryoEM
Release date: April 19, 2023
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7xr2
Q-score: 0.548

Zhang Q, Gao Y, Baker ML, Liu S, Jia X, Xu H, He J, Kaelber JT, Weng S, Jiang W

PLoS Pathog (2023) 19 pp. e1011341-e1011341 [ Pubmed: 37083840 DOI: doi:10.1371/journal.ppat.1011341 ]

EMD-33404
Download Map
3D View
Raw data
EMPIAR-11616
3.4 Angstrom cryoEM D5 reconstruction of mud crab reovirus
CryoEM
Release date: April 19, 2023
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7xr3
Q-score: 0.358

Zhang Q, Gao Y, Baker ML, Liu S, Jia X, Xu H, He J, Kaelber JT, Weng S, Jiang W

PLoS Pathog (2023) 19 pp. e1011341-e1011341 [ Pubmed: 37083840 DOI: doi:10.1371/journal.ppat.1011341 ]

EMD-26945
Download Map
3D View
Cryo-EM structure of SINV/EEEV in complex with Fab fragment of a moderately/weakly neutralizing human antibody IgG-21
CryoEM
Release date: April 5, 2023
Resolution: 5.9 Å
EM Method: Single-particle
Fitted PDBs: 7v0n
Q-score: 0.123

Williamson LE, Bandyopadhyay A, Bailey K, Sirohi D, Klose T, Julander JG, Kuhn RJ, Crowe Jr JE

PNAS (2023) 120 pp. e2213690120-e2213690120 [ DOI: doi:10.1073/pnas.2213690120 Pubmed: 36961925 ]

EMD-26946
Download Map
3D View
Cryo-EM structure of SINV/EEEV in complex with Fab fragment of a moderately/weakly neutralizing human antibody IgG-94
CryoEM
Release date: April 5, 2023
Resolution: 6.6 Å
EM Method: Single-particle
Fitted PDBs: 7v0o
Q-score: 0.102

Williamson LE, Bandyopadhyay A, Bailey K, Sirohi D, Klose T, Julander JG, Kuhn RJ, Crowe Jr JE

PNAS (2023) 120 pp. e2213690120-e2213690120 [ DOI: doi:10.1073/pnas.2213690120 Pubmed: 36961925 ]

EMD-26947
Download Map
3D View
Cryo-EM structure of SINV/EEEV in complex with Fab fragment of a potently neutralizing human antibody IgG-106
CryoEM
Release date: April 5, 2023
Resolution: 5.2 Å
EM Method: Single-particle
Fitted PDBs: 7v0p
Q-score: 0.17

Williamson LE, Bandyopadhyay A, Bailey K, Sirohi D, Klose T, Julander JG, Kuhn RJ, Crowe Jr JE

PNAS (2023) 120 pp. e2213690120-e2213690120 [ DOI: doi:10.1073/pnas.2213690120 Pubmed: 36961925 ]

EMD-29020
Download Map
3D View
Structure of dengue virus DENV2 in complex with prM12, an anti-PrM monoclonal antibody
CryoEM
Release date: Feb. 1, 2023
Resolution: 10.2 Å
EM Method: Single-particle
Fitted PDBs: 8fe3
Q-score: 0.059

A Dowd K, Sirohi D, D Speer S, VanBlargan LA, Chen RE, Mukherjee S, Whitener BM, Govero J, Aleshnick M, Larman B, Sukupolvi-Petty S, Sevvana M, Miller AS, Klose T, Zheng A, Koenig S, Kielian M, Kuhn RJ, Diamond MS, Pierson TC

PNAS (2023) 120 pp. e2218899120-e2218899120 [ Pubmed: 36638211 DOI: doi:10.1073/pnas.2218899120 ]

EMD-24606
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3D View
EV-71
CryoEM
Release date: Aug. 10, 2022
Resolution: 3.5 Å
EM Method: Single-particle

Chen C-L, Kuhn RJ, Klose T

Not published ()

EMD-24199
Download Map
3D View
Localized reconstruction of EEEV
CryoEM
Release date: June 22, 2022
Resolution: 5.1 Å
EM Method: Single-particle

Chen CL, Klose T, Sun C, Kim AS, Buda G, Rossmann MG, Diamond MS, Klimstra WB, Kuhn RJ

PNAS (2022) 119 pp. e2114119119-e2114119119 [ Pubmed: 35867819 DOI: doi:10.1073/pnas.2114119119 ]

Sort by: Download
Showing 1 - 10 of 78. Page 1 of 8
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [78]

Current status

  • REL [78]

Sample type

  • Virus [74]
  • Protein [64]
  • Ligand [14]
  • Complex [9]

Organism

  • Enterovirus d [27]
  • Eastern equine encephalitis virus [15]
  • Homo sapiens [10]
  • Fako virus [7]
  • Mus musculus [5]
  • Rhinovirus b [4]
  • Pseudoalteromonas phage tw1 [4]
  • Zika virus [3]
  • Zika virus [3]
  • Faustovirus [2]
  • Eastern equine encephalitis virus [2]
  • Scylla serrata reovirus sz-2007 [2]
  • Rhinovirus c [2]
  • Usutu virus [2]
  • Venezuelan equine encephalitis virus [1]
  • Dengue virus [1]
  • Wenzhou tombus-like virus 18 [1]
  • Enterovirus a [1]
  • Culiseta melanura [1]
  • Recovirus a [1]
  • Staphylococcus virus 80alpha [1]
  • Mayaro virus [1]

EM Method

  • Single-particle [78]

Resolution

  • ≥ 2Å and < 3Å [15]
  • ≥ 3Å and < 4Å [30]
  • ≥ 4Å and < 5Å [5]
  • ≥ 5Å and < 6Å [8]
  • ≥ 6Å and < 8Å [5]
  • ≥ 8Å and < 12Å [5]
  • ≥ 12Å and < 16Å [3]
  • ≥ 16Å and < 20Å [2]
  • ≥ 20Å and < 30Å [4]

Model molecular weight

  • 250-500 kDa [4]
  • 500-1000 kDa [3]
  • 2-5 MDa [1]
  • 5-10 MDa [27]
  • > 10 MDa [17]

Release Date

  • 2025 [2]
  • 2023 [6]
  • 2022 [9]
  • 2021 [2]
  • 2020 [5]
  • 2019 [16]
  • 2018 [25]
  • 2017 [7]
  • 2016 [6]

Author by name

  • Rossmann MG [56]
  • Klose T [34]
  • Buda G [33]
  • Liu Y [31]
  • Van Kuppeveld Fjm [25]
  • Van Vliet Alw [25]
  • Kuhn RJ [24]
  • Jiang W [22]
  • Sheng J [19]
  • Klimstra WB [11]
  • Sun C [11]
  • Diamond MS [10]
  • Kaelber JT [10]
  • Chen CL [9]
  • Auguste AJ [8]
  • Chen C-L [8]
  • Chiu W [8]
  • Crowe Jr Je [8]
  • Sirohi D [8]
  • Kim AS [7]
  • Weaver SC [7]
  • Williamson LE [7]
  • Baggen J [6]
  • Lyoo H [6]
  • Meijer A [6]
  • Overduin P [6]
  • Roberts RW [6]
  • Thibaut HJ [6]
  • Wahedi M [6]
  • De Bruin Jw [6]
  • Bailey K [5]
  • Bandyopadhyay A [5]
  • Fokine A [5]
  • Julander JG [5]
  • Miller AS [5]
  • Bochkov YA [4]
  • Cho BC [4]
  • Dong Y [4]
  • Hardies SC [4]
  • Hasan SS [4]
  • Long F [4]
  • Sevvana M [4]
  • Smith TJ [4]
  • Wang Z [4]
  • Xu Z [4]
  • Chen Z [3]
  • Gao Y [3]
  • He J [3]
  • Liu S [3]
  • Weng S [3]
  • Zhang Q [3]
  • Baker ML [2]
  • Benamar S [2]
  • Bombardi R [2]
  • Colson P [2]
  • Fang Q [2]
  • Fernandez E [2]
  • Fu J [2]
  • Georgiev IS [2]
  • Gern JE [2]
  • Gilliland Jr T [2]
  • Hill MG [2]
  • Hollerbach A [2]
  • Jia X [2]
  • Khare B [2]
  • Kose N [2]
  • La Scola B [2]
  • Li K [2]
  • Palmenberg AC [2]
  • Pierson TC [2]
  • Reteno DG [2]
  • Setliff I [2]
  • Sun L [2]
  • Sun Y [2]
  • Trivette A [2]
  • Vogt MR [2]
  • Watters K [2]
  • Xu H [2]
  • A Dowd K [1]
  • Aleshnick M [1]
  • Beutler N [1]
  • Bryan A [1]
  • Burton DR [1]
  • Chen F [1]
  • Chen RE [1]
  • Chmielewski D [1]
  • Christie GE [1]
  • Cong Y [1]
  • Crowe JE [1]
  • D Speer S [1]
  • Davidson E [1]
  • Dearborn AD [1]
  • Dokland T [1]
  • Doranz BJ [1]
  • Dowd AD [1]
  • Doyle M [1]
  • Fan C [1]
  • Gao YZ [1]
  • Govero J [1]
  • Hill RLL [1]

Author by ORCID

  • Klose T [34]
  • Van Kuppeveld Fjm [25]
  • Liu Y [25]
  • Jiang W [19]
  • Kuhn RJ [19]
  • Chen CL [9]
  • Kaelber JT [8]
  • Crowe Jr Je [8]
  • Kim AS [7]
  • Thibaut HJ [6]
  • Lyoo H [6]
  • Sirohi D [6]
  • Auguste AJ [6]
  • Baggen J [6]
  • Chiu W [6]
  • Bandyopadhyay A [5]
  • Williamson LE [4]
  • Bochkov YA [4]
  • Bailey K [3]
  • Julander JG [3]
  • Sevvana M [3]
  • Colson P [2]
  • Zhang Q [2]
  • La Scola B [2]
  • Pierson TC [2]
  • Vogt MR [2]
  • Bombardi R [2]
  • Khare B [2]
  • Fu J [2]
  • Fang Q [2]
  • Jia X [2]
  • Sun Y [2]
  • Setliff I [2]
  • Aleshnick M [1]
  • Dokland T [1]
  • Whitener BM [1]
  • Weaver S [1]
  • Ku Z [1]
  • Stagg SM [1]
  • Parvate AD [1]
  • Crowe JE [1]
  • Huang Z [1]
  • Zheng A [1]
  • Ye X [1]
  • Kizziah JL [1]
  • Lai YC [1]
  • Chmielewski D [1]
  • Diamond MS [1]
  • Parren M [1]
  • Dearborn AD [1]
  • Larman B [1]
  • Beutler N [1]
  • A Dowd K [1]
  • Jin J [1]
  • Klenow L [1]
  • Williams EP [1]
  • Chen C-L [1]

Journal

  • PNAS [43]
  • STRUCTURE [11]
  • NAT COMMUN [9]
  • TO BE PUBLISHED [3]
  • J VIROL [2]
  • PLOS PATHOG [2]
  • SCI IMMUNOL [2]
  • SCIENCE [2]
  • VIRUSES [2]
  • J VIROL METHODS [1]
  • NAT STRUCT MOL BIOL [1]
  • NOT PUBLISHED [1]

Software

  • JSPR [78]
  • RELION [40]
  • CTFFIND [6]
  • CISTEM [3]
  • J3DR [2]
  • CRYOSPARC [1]
  • FITCTF2.PY [1]
  • GCTF [1]
  • SCIPION [1]

Microscope

  • FEI TITAN KRIOS [70]
  • JEOL 3200FSC [8]

Electron Source

  • FIELD EMISSION GUN [78]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [49]
  • GATAN K3 BIOQUANTUM 6K X 4K [8]
  • DIRECT ELECTRON DE-20 5K X 3K [7]
  • GATAN ULTRASCAN 4000 4K X 4K [4]
  • FEI FALCON II 4K X 4K [3]
  • GATAN K3 6K X 4K [3]
  • OTHER [3]
  • DIRECT ELECTRON DE-16 4K X 4K [1]

External links

  • PDB [78]
  • UniProt [51]
  • PDBe-Kb [43]
  • InterPro [38]
  • Gene Ontology [36]
  • CATH [20]
  • AlphaFold DB [18]
  • ChEBI [14]
  • ChEMBL [14]
  • DrugBank [9]
  • SCOP2 [3]
  • EMPIAR [2]
  • Pfam [2]