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Filter By

Current Database

  • EMDB [112]

Current status

  • REL [112]

Sample type

  • Protein [99]
  • Complex [94]
  • RNA [73]
  • Ligand [59]
  • Cellular component [12]
  • Virus [7]
  • DNA [1]

Organism

  • Escherichia coli [40]
  • Escherichia coli [34]
  • Homo sapiens [17]
  • Pseudomonas aeruginosa [4]
  • Pseudomonas aeruginosa [4]
  • Salmonella enterica [4]
  • Pyrococcus furiosus [3]
  • Saccharomyces cerevisiae [3]
  • Oryctolagus cuniculus [3]
  • Salmonella phage p22 [2]
  • Escherichia coli [2]
  • Synthetic construct [2]
  • Danio rerio [2]
  • Vesicular stomatitis virus [1]
  • Indiana vesiculovirus [1]
  • Cyphellophora europaea [1]
  • Pseudomonas phage jbd30 [1]
  • Bacillus subtilis [1]
  • Bacillus subtilis [1]
  • Adeno-associated virus [1]
  • Cyphellophora europaea [1]
  • Escherichia phage ms2 [1]
  • Shewanella xiamenensis [1]
  • Thermus virus p74-26 [1]
  • Human polyomavirus 5 [1]
  • Saccharomyces cerevisiae [1]
  • Streptomyces californicus [1]
  • Cafeteria roenbergensis virus [1]
  • Gallus gallus [1]
  • Bos taurus [1]

EM Method

  • Single-particle [112]

Resolution

  • < 2Å [1]
  • ≥ 2Å and < 3Å [13]
  • ≥ 3Å and < 4Å [75]
  • ≥ 4Å and < 5Å [11]
  • ≥ 6Å and < 8Å [7]
  • ≥ 8Å and < 12Å [3]
  • ≥ 12Å and < 16Å [1]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 50-100 kDa [2]
  • 100-250 kDa [4]
  • 250-500 kDa [7]
  • 500-1000 kDa [5]
  • 1-2 MDa [19]
  • 2-5 MDa [59]
  • > 10 MDa [2]

Release Date

  • 2026 [9]
  • 2025 [3]
  • 2024 [2]
  • 2022 [9]
  • 2021 [7]
  • 2020 [28]
  • 2019 [1]
  • 2018 [16]
  • 2017 [21]
  • 2016 [16]

Author by name

  • Demo G [64]
  • Korostelev AA [61]
  • Loveland AB [58]
  • Hou YM [24]
  • Grigorieff N [16]
  • Masuda I [16]
  • Carbone CE [15]
  • Hassan AH [12]
  • Pinkas M [12]
  • Svidritskiy E [11]
  • Hite RK [10]
  • Paknejad N [10]
  • Blaha G [9]
  • Dworkin J [9]
  • Gamper H [9]
  • Hassan A [9]
  • Nagarajan S [9]
  • Nakano Y [9]
  • Bartesaghi A [8]
  • Earl LA [8]
  • Falconieri V [8]
  • Gamper Jr Hb [8]
  • Merk A [8]
  • Rao P [8]
  • Subramaniam S [8]
  • Gamper HB [7]
  • Diaz-avalos R [6]
  • Madireddy R [6]
  • Bah E [4]
  • Banerjee S [4]
  • Bergeron JR [4]
  • Boxer MB [4]
  • Brilot AF [4]
  • Davis MI [4]
  • Deng W [4]
  • Eng ET [4]
  • Finlay BB [4]
  • Fox T [4]
  • Guo TW [4]
  • Hong C [4]
  • Huang RK [4]
  • Majewski DD [4]
  • Milne JL [4]
  • Patel DJ [4]
  • Pragani R [4]
  • Raczkowski AM [4]
  • Spreter T [4]
  • Strynadka NC [4]
  • Vuckovic M [4]
  • Worrall LJ [4]
  • Yang H [4]
  • Yu Z [4]
  • Zhang Y [4]
  • Aleksashin NA [3]
  • Beckmann R [3]
  • Huang S [3]
  • Ishino S [3]
  • Ito K [3]
  • Jaeger L [3]
  • Kefi A [3]
  • Klepacki D [3]
  • Mankin AS [3]
  • Nudler E [3]
  • Rasouly A [3]
  • Reier K [3]
  • Remme J [3]
  • Svetlov V [3]
  • Szal T [3]
  • Uchiumi T [3]
  • Vasilyev N [3]
  • Vazquez-laslop N [3]
  • Yaeshima C [3]
  • Abdelshahid M [2]
  • Arenz S [2]
  • Baker TS [2]
  • Bange G [2]
  • Baradaran R [2]
  • Beckert B [2]
  • Berninghausen O [2]
  • Cardone G [2]
  • Casjens SR [2]
  • Chen J [2]
  • Ganesan R [2]
  • Gilcrease EB [2]
  • Grant T [2]
  • Jacobson A [2]
  • Johnson JE [2]
  • Koh CS [2]
  • Long SB [2]
  • Mcnulty R [2]
  • Schafer H [2]
  • Siliciano AF [2]
  • Sousa D [2]
  • Steinchen W [2]
  • Turgay K [2]
  • Wang C [2]
  • Wilson DN [2]
  • Zhang Z [2]
  • Agnello E [1]
  • Avila GA [1]

Author by ORCID

  • Korostelev AA [61]
  • Demo G [55]
  • Loveland AB [27]
  • Grigorieff N [16]
  • Hou YM [15]
  • Paknejad N [10]
  • Hite RK [10]
  • Gamper Jr Hb [8]
  • Subramaniam S [8]
  • Gamper HB [7]
  • Masuda I [7]
  • Bah E [4]
  • Brilot AF [4]
  • Eng ET [4]
  • Raczkowski AM [4]
  • Davis MI [4]
  • Kefi A [3]
  • Hassan AH [3]
  • Jaeger L [3]
  • Uchiumi T [3]
  • Mankin AS [3]
  • Aleksashin NA [3]
  • Nudler E [3]
  • Huang S [3]
  • Vazquez-laslop N [3]
  • Rasouly A [3]
  • Baker TS [2]
  • Grant T [2]
  • Jacobson A [2]
  • Baradaran R [2]
  • Bange G [2]
  • Long SB [2]
  • Turgay K [2]
  • Ganesan R [2]
  • Mcnulty R [2]
  • Wilson DN [2]
  • Cardone G [2]
  • Xiao C [1]
  • Robinson CV [1]
  • Chapman MS [1]
  • Noble AJ [1]
  • Zocher G [1]
  • Stagg SM [1]
  • Gao FB [1]
  • Schmidt C [1]
  • Lai M [1]
  • Kelch BA [1]
  • Agnello E [1]
  • Januliene D [1]
  • Fischer MG [1]
  • Dai X [1]
  • Stehle T [1]
  • Liang B [1]
  • Bloyet LM [1]
  • Stone NP [1]
  • Shu S [1]
  • Ulloa-rondeau N [1]
  • Mazhab-jafari MT [1]
  • Rubinstein JL [1]
  • Moeller A [1]
  • Whelan SPJ [1]
  • Blaum BS [1]
  • Bayer NJ [1]
  • Susorov D [1]

Journal

  • NATURE [39]
  • NAT COMMUN [20]
  • CELL [10]
  • NAT STRUCT MOL BIOL [10]
  • BIORXIV [9]
  • ELIFE [9]
  • NUCLEIC ACIDS RES [3]
  • BIOPHYS J [2]
  • EMBO J [2]
  • CELL REP [1]
  • J BIOL CHEM [1]
  • J VIROL [1]
  • METHODS [1]
  • MOL THER METHODS CLIN DEV [1]
  • SCI REP [1]
  • SCI SIGNAL [1]
  • TO BE PUBLISHED [1]

Software

  • FREALIGN [111]
  • CTFFIND [19]
  • RELION [17]
  • CISTEM [5]
  • CTFFIND4 [2]
  • ACE [1]
  • AUTO3DEM [1]
  • CRYOSPARC [1]
  • EMAN2 [1]
  • FREALIGNX [1]

Microscope

  • FEI TITAN KRIOS [91]
  • TFS KRIOS [9]
  • FEI TALOS ARCTICA [8]
  • TFS TALOS [3]
  • FEI/PHILIPS CM300FEG/ST [1]

Electron Source

  • FIELD EMISSION GUN [112]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [65]
  • GATAN K3 6K X 4K [24]
  • GATAN K2 QUANTUM 4K X 4K [10]
  • FEI FALCON II 4K X 4K [6]
  • DIRECT ELECTRON DE-20 5K X 3K [3]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]
  • FEI FALCON III 4K X 4K [1]
  • KODAK SO-163 FILM [1]

External links

  • PDB [98]
  • UniProt [98]
  • PDBe-Kb [97]
  • AlphaFold DB [94]
  • Gene Ontology [94]
  • Pfam [90]
  • InterPro [89]
  • ChEBI [59]
  • DrugBank [58]
  • Complex Portal [49]
  • ChEMBL [44]
  • CATH [7]
  • SCOP2 [2]
Sort by: Download
Showing 1 - 10 of 112. Page 1 of 12
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EMD-55171
Download Map
3D View
30S ribosomal subunit RimM-KO with IF1 and IF3 State I
CryoEM
Release date: Feb. 4, 2026
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9ss0

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55173
Download Map
3D View
30S ribosomal subunit RimM-KO with IF1 and IF3 State II
CryoEM
Release date: Feb. 4, 2026
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9ss1

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55174
Download Map
3D View
30S ribosomal subunit RimM-KO with IF1 and IF3 State III
CryoEM
Release date: Feb. 4, 2026
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9ss2

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55176
Download Map
3D View
pre-50S ribosomal subunit in rimM-KO with RsfS -H68
CryoEM
Release date: Feb. 4, 2026
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9ss4

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55177
Download Map
3D View
50S ribosomal subunit in rimM-KO with RsfS H68
CryoEM
Release date: Feb. 4, 2026
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9ss5

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55181
Download Map
3D View
30S ribosomal subunit RimM-WT with IF1 and IF3
CryoEM
Release date: Feb. 4, 2026
Resolution: 3.1 Å
EM Method: Single-particle

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55182
Download Map
3D View
pre-50S ribosomal subunit from RimM-WT with RsfS -H68
CryoEM
Release date: Feb. 4, 2026
Resolution: 2.7 Å
EM Method: Single-particle

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55183
Download Map
3D View
50S ribosomal subunit from RimM-WT with RsfS H68
CryoEM
Release date: Feb. 4, 2026
Resolution: 2.7 Å
EM Method: Single-particle

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55185
Download Map
3D View
70S ribosome from RimM-WT
CryoEM
Release date: Feb. 4, 2026
Resolution: 3.0 Å
EM Method: Single-particle

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-50611
Download Map
3D View
PF30S-PF30S dimer mediated by aRDF from P. furiosus Structure I
CryoEM
Release date: Jan. 15, 2025
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9fny
Q-score: 0.313

Hassan AH, Pinkas M, Yaeshima C, Ishino S, Uchiumi T, Ito K, Demo G

Nucleic Acids Res (2025) 53 [ Pubmed: 39797736 DOI: doi:10.1093/nar/gkae1324 ]

Sort by: Download
Showing 1 - 10 of 112. Page 1 of 12
Display:
Statistics
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Filter By

Current Database

  • EMDB [112]

Current status

  • REL [112]

Sample type

  • Protein [99]
  • Complex [94]
  • RNA [73]
  • Ligand [59]
  • Cellular component [12]
  • Virus [7]
  • DNA [1]

Organism

  • Escherichia coli [40]
  • Escherichia coli [34]
  • Homo sapiens [17]
  • Pseudomonas aeruginosa [4]
  • Pseudomonas aeruginosa [4]
  • Salmonella enterica [4]
  • Pyrococcus furiosus [3]
  • Saccharomyces cerevisiae [3]
  • Oryctolagus cuniculus [3]
  • Salmonella phage p22 [2]
  • Escherichia coli [2]
  • Synthetic construct [2]
  • Danio rerio [2]
  • Vesicular stomatitis virus [1]
  • Indiana vesiculovirus [1]
  • Cyphellophora europaea [1]
  • Pseudomonas phage jbd30 [1]
  • Bacillus subtilis [1]
  • Bacillus subtilis [1]
  • Adeno-associated virus [1]
  • Cyphellophora europaea [1]
  • Escherichia phage ms2 [1]
  • Shewanella xiamenensis [1]
  • Thermus virus p74-26 [1]
  • Human polyomavirus 5 [1]
  • Saccharomyces cerevisiae [1]
  • Streptomyces californicus [1]
  • Cafeteria roenbergensis virus [1]
  • Gallus gallus [1]
  • Bos taurus [1]

EM Method

  • Single-particle [112]

Resolution

  • < 2Å [1]
  • ≥ 2Å and < 3Å [13]
  • ≥ 3Å and < 4Å [75]
  • ≥ 4Å and < 5Å [11]
  • ≥ 6Å and < 8Å [7]
  • ≥ 8Å and < 12Å [3]
  • ≥ 12Å and < 16Å [1]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 50-100 kDa [2]
  • 100-250 kDa [4]
  • 250-500 kDa [7]
  • 500-1000 kDa [5]
  • 1-2 MDa [19]
  • 2-5 MDa [59]
  • > 10 MDa [2]

Release Date

  • 2026 [9]
  • 2025 [3]
  • 2024 [2]
  • 2022 [9]
  • 2021 [7]
  • 2020 [28]
  • 2019 [1]
  • 2018 [16]
  • 2017 [21]
  • 2016 [16]

Author by name

  • Demo G [64]
  • Korostelev AA [61]
  • Loveland AB [58]
  • Hou YM [24]
  • Grigorieff N [16]
  • Masuda I [16]
  • Carbone CE [15]
  • Hassan AH [12]
  • Pinkas M [12]
  • Svidritskiy E [11]
  • Hite RK [10]
  • Paknejad N [10]
  • Blaha G [9]
  • Dworkin J [9]
  • Gamper H [9]
  • Hassan A [9]
  • Nagarajan S [9]
  • Nakano Y [9]
  • Bartesaghi A [8]
  • Earl LA [8]
  • Falconieri V [8]
  • Gamper Jr Hb [8]
  • Merk A [8]
  • Rao P [8]
  • Subramaniam S [8]
  • Gamper HB [7]
  • Diaz-avalos R [6]
  • Madireddy R [6]
  • Bah E [4]
  • Banerjee S [4]
  • Bergeron JR [4]
  • Boxer MB [4]
  • Brilot AF [4]
  • Davis MI [4]
  • Deng W [4]
  • Eng ET [4]
  • Finlay BB [4]
  • Fox T [4]
  • Guo TW [4]
  • Hong C [4]
  • Huang RK [4]
  • Majewski DD [4]
  • Milne JL [4]
  • Patel DJ [4]
  • Pragani R [4]
  • Raczkowski AM [4]
  • Spreter T [4]
  • Strynadka NC [4]
  • Vuckovic M [4]
  • Worrall LJ [4]
  • Yang H [4]
  • Yu Z [4]
  • Zhang Y [4]
  • Aleksashin NA [3]
  • Beckmann R [3]
  • Huang S [3]
  • Ishino S [3]
  • Ito K [3]
  • Jaeger L [3]
  • Kefi A [3]
  • Klepacki D [3]
  • Mankin AS [3]
  • Nudler E [3]
  • Rasouly A [3]
  • Reier K [3]
  • Remme J [3]
  • Svetlov V [3]
  • Szal T [3]
  • Uchiumi T [3]
  • Vasilyev N [3]
  • Vazquez-laslop N [3]
  • Yaeshima C [3]
  • Abdelshahid M [2]
  • Arenz S [2]
  • Baker TS [2]
  • Bange G [2]
  • Baradaran R [2]
  • Beckert B [2]
  • Berninghausen O [2]
  • Cardone G [2]
  • Casjens SR [2]
  • Chen J [2]
  • Ganesan R [2]
  • Gilcrease EB [2]
  • Grant T [2]
  • Jacobson A [2]
  • Johnson JE [2]
  • Koh CS [2]
  • Long SB [2]
  • Mcnulty R [2]
  • Schafer H [2]
  • Siliciano AF [2]
  • Sousa D [2]
  • Steinchen W [2]
  • Turgay K [2]
  • Wang C [2]
  • Wilson DN [2]
  • Zhang Z [2]
  • Agnello E [1]
  • Avila GA [1]

Author by ORCID

  • Korostelev AA [61]
  • Demo G [55]
  • Loveland AB [27]
  • Grigorieff N [16]
  • Hou YM [15]
  • Paknejad N [10]
  • Hite RK [10]
  • Gamper Jr Hb [8]
  • Subramaniam S [8]
  • Gamper HB [7]
  • Masuda I [7]
  • Bah E [4]
  • Brilot AF [4]
  • Eng ET [4]
  • Raczkowski AM [4]
  • Davis MI [4]
  • Kefi A [3]
  • Hassan AH [3]
  • Jaeger L [3]
  • Uchiumi T [3]
  • Mankin AS [3]
  • Aleksashin NA [3]
  • Nudler E [3]
  • Huang S [3]
  • Vazquez-laslop N [3]
  • Rasouly A [3]
  • Baker TS [2]
  • Grant T [2]
  • Jacobson A [2]
  • Baradaran R [2]
  • Bange G [2]
  • Long SB [2]
  • Turgay K [2]
  • Ganesan R [2]
  • Mcnulty R [2]
  • Wilson DN [2]
  • Cardone G [2]
  • Xiao C [1]
  • Robinson CV [1]
  • Chapman MS [1]
  • Noble AJ [1]
  • Zocher G [1]
  • Stagg SM [1]
  • Gao FB [1]
  • Schmidt C [1]
  • Lai M [1]
  • Kelch BA [1]
  • Agnello E [1]
  • Januliene D [1]
  • Fischer MG [1]
  • Dai X [1]
  • Stehle T [1]
  • Liang B [1]
  • Bloyet LM [1]
  • Stone NP [1]
  • Shu S [1]
  • Ulloa-rondeau N [1]
  • Mazhab-jafari MT [1]
  • Rubinstein JL [1]
  • Moeller A [1]
  • Whelan SPJ [1]
  • Blaum BS [1]
  • Bayer NJ [1]
  • Susorov D [1]

Journal

  • NATURE [39]
  • NAT COMMUN [20]
  • CELL [10]
  • NAT STRUCT MOL BIOL [10]
  • BIORXIV [9]
  • ELIFE [9]
  • NUCLEIC ACIDS RES [3]
  • BIOPHYS J [2]
  • EMBO J [2]
  • CELL REP [1]
  • J BIOL CHEM [1]
  • J VIROL [1]
  • METHODS [1]
  • MOL THER METHODS CLIN DEV [1]
  • SCI REP [1]
  • SCI SIGNAL [1]
  • TO BE PUBLISHED [1]

Software

  • FREALIGN [111]
  • CTFFIND [19]
  • RELION [17]
  • CISTEM [5]
  • CTFFIND4 [2]
  • ACE [1]
  • AUTO3DEM [1]
  • CRYOSPARC [1]
  • EMAN2 [1]
  • FREALIGNX [1]

Microscope

  • FEI TITAN KRIOS [91]
  • TFS KRIOS [9]
  • FEI TALOS ARCTICA [8]
  • TFS TALOS [3]
  • FEI/PHILIPS CM300FEG/ST [1]

Electron Source

  • FIELD EMISSION GUN [112]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [65]
  • GATAN K3 6K X 4K [24]
  • GATAN K2 QUANTUM 4K X 4K [10]
  • FEI FALCON II 4K X 4K [6]
  • DIRECT ELECTRON DE-20 5K X 3K [3]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]
  • FEI FALCON III 4K X 4K [1]
  • KODAK SO-163 FILM [1]

External links

  • PDB [98]
  • UniProt [98]
  • PDBe-Kb [97]
  • AlphaFold DB [94]
  • Gene Ontology [94]
  • Pfam [90]
  • InterPro [89]
  • ChEBI [59]
  • DrugBank [58]
  • Complex Portal [49]
  • ChEMBL [44]
  • CATH [7]
  • SCOP2 [2]