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Current Database

  • EMDB [18]

Current status

  • REL [18]

Sample type

  • Cellular component [13]
  • Cell [4]
  • Virus [1]

Organism

  • Danio rerio [9]
  • Chlamydomonas reinhardtii [4]
  • Neospora caninum [3]
  • Mycobacterium phage bxb1 [1]
  • Homo sapiens [1]

EM Method

  • Subtomogram averaging [18]

Resolution

  • ≥ 8Å and < 12Å [1]
  • ≥ 16Å and < 20Å [3]
  • ≥ 20Å and < 30Å [6]
  • ≥ 30Å [8]

Release Date

  • 2025 [1]
  • 2024 [5]
  • 2023 [12]

Author by name

  • Kikkawa M [9]
  • Morikawa M [9]
  • Yamaguchi H [9]
  • Alvarez Viar G [4]
  • Bolognini D [4]
  • Capasso P [4]
  • Klena N [4]
  • Martino F [4]
  • Nievergelt AP [4]
  • Pigino G [4]
  • Cai K [3]
  • Gui L [3]
  • Nicastro D [3]
  • O Shaughnessy Wj [3]
  • Reese ML [3]
  • Reetz E [3]
  • Amorim MJ [1]
  • Chlanda P [1]
  • Conway JF [1]
  • Freeman KG [1]
  • Hatfull GF [1]
  • Ho MC [1]
  • Huet A [1]
  • Jacobs-sera D [1]
  • Lowary TL [1]
  • Macale LS [1]
  • Makroczyova J [1]
  • Mondal S [1]
  • Narsico JT [1]
  • Ortiz V [1]
  • Park D [1]
  • Perez RJ [1]
  • Peterl S [1]
  • Podgorski J [1]
  • Silva BH [1]
  • Vale-costa S [1]
  • Wachsmuth-melm M [1]
  • White SJ [1]

Author by ORCID

  • Kikkawa M [9]
  • Yamaguchi H [9]
  • Morikawa M [9]
  • Capasso P [4]
  • Reese ML [3]
  • Nicastro D [3]
  • Gui L [3]
  • Cai K [3]
  • O'shaughnessy WJ [3]
  • Makroczyova J [1]
  • Vale-costa S [1]
  • Mondal S [1]
  • Amorim MJ [1]
  • Conway JF [1]
  • Chlanda P [1]
  • Peterl S [1]
  • Wachsmuth-melm M [1]

Journal

  • ELIFE [9]
  • CURR BIOL [4]
  • NAT COMMUN [3]
  • CELL [1]
  • TO BE PUBLISHED [1]

Software

  • IMOD [9]
  • PEET [9]
  • DYNAMO [1]
  • EMAN2 [1]

Microscope

  • TFS KRIOS [10]
  • FEI TITAN [4]
  • FEI TITAN KRIOS [4]

Electron Source

  • FIELD EMISSION GUN [18]

Film or detector model

  • GATAN K3 6K X 4K [10]
  • GATAN K2 SUMMIT 4K X 4K [4]
  • GATAN K3 BIOQUANTUM 6K X 4K [4]

External links

  • EMPIAR [1]
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EMD-51790
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3D View
Subtomogram average of intracellular influenza A virus hemagglutinin subtype H1
Release date: Oct. 29, 2025
Resolution: 30.0 Å
EM Method: Subtomogram averaging

Wachsmuth-Melm M, Chlanda P, Peterl S, Makroczyova J, Vale-Costa S, Amorim MJ

To Be Published

EMD-50564
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3D View
96 nm repeat of the axonemal microtubule doublets of the tpg1 strain from C.reinhardtii
Release date: Oct. 2, 2024
Resolution: 30.0 Å
EM Method: Subtomogram averaging

Alvarez Viar G, Klena N, Martino F, Nievergelt AP, Bolognini D, Capasso P, Pigino G

Curr Biol (2024) 34 pp. 4464-4475.e9 [ Pubmed: 39270640 DOI: doi:10.1016/j.cub.2024.08.021 ]

EMD-50565
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96nm repeat of the axonemal doublets from the tubulin glycylation depleted ttll3 strain from C.reinhardtii
Release date: Oct. 2, 2024
Resolution: 30.0 Å
EM Method: Subtomogram averaging

Alvarez Viar G, Klena N, Martino F, Nievergelt AP, Bolognini D, Capasso P, Pigino G

Curr Biol (2024) 34 pp. 4464-4475.e9 [ Pubmed: 39270640 DOI: doi:10.1016/j.cub.2024.08.021 ]

EMD-50568
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96nm repeat of the axonemal doublets from C.reinhardtii decorated with polyE antibodies
Release date: Oct. 2, 2024
Resolution: 30.0 Å
EM Method: Subtomogram averaging

Alvarez Viar G, Klena N, Martino F, Nievergelt AP, Bolognini D, Capasso P, Pigino G

Curr Biol (2024) 34 pp. 4464-4475.e9 [ Pubmed: 39270640 DOI: doi:10.1016/j.cub.2024.08.021 ]

EMD-50569
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96nm repeat of the axonemal doublets of the tpg1 strain from C.reinhardtii incubated with polyE antiobodies
Release date: Oct. 2, 2024
Resolution: 30.0 Å
EM Method: Subtomogram averaging

Alvarez Viar G, Klena N, Martino F, Nievergelt AP, Bolognini D, Capasso P, Pigino G

Curr Biol (2024) 34 pp. 4464-4475.e9 [ Pubmed: 39270640 DOI: doi:10.1016/j.cub.2024.08.021 ]

EMD-46702
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Raw data
EMPIAR-12238
Subtomogram averaging of Bxb1 phage capsid DNA-filled during the infection state
Release date: Sept. 18, 2024
Resolution: 11.65 Å
EM Method: Subtomogram averaging

Freeman KG, Mondal S, Macale LS, Podgorski J, White SJ, Silva BH, Ortiz V, Huet A, Perez RJ, Narsico JT, Ho MC, Jacobs-Sera D, Lowary TL, Conway JF, Park D, Hatfull GF

Cell (2025) 188 pp. 2925-2942.e17 [ Pubmed: 40239650 DOI: doi:10.1016/j.cell.2025.03.027 ]

EMD-34791
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Doublet microtubule of zebrafish sperm axoneme, WT
Release date: April 26, 2023
Resolution: 22.0 Å
EM Method: Subtomogram averaging

Yamaguchi H, Morikawa M, Kikkawa M

eLife (2023) 12 [ Pubmed: 37057896 DOI: doi:10.7554/eLife.84860 ]

EMD-34792
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Radial spoke 1 of zebrafish sperm axoneme, WT
Release date: April 26, 2023
Resolution: 21.4 Å
EM Method: Subtomogram averaging

Yamaguchi H, Morikawa M, Kikkawa M

eLife (2023) 12 [ Pubmed: 37057896 DOI: doi:10.7554/eLife.84860 ]

EMD-34794
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Radial spoke 3 of zebrafish sperm axoneme, WT
Release date: April 26, 2023
Resolution: 21.7 Å
EM Method: Subtomogram averaging

Yamaguchi H, Morikawa M, Kikkawa M

eLife (2023) 12 [ Pubmed: 37057896 DOI: doi:10.7554/eLife.84860 ]

EMD-34795
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Doublet microtubule of zebrafish sperm axoneme, calaxin-/-, OAD class
Release date: April 26, 2023
Resolution: 22.6 Å
EM Method: Subtomogram averaging

Yamaguchi H, Morikawa M, Kikkawa M

eLife (2023) 12 [ Pubmed: 37057896 DOI: doi:10.7554/eLife.84860 ]

Sort by: Download
Showing 1 - 10 of 18. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [18]

Current status

  • REL [18]

Sample type

  • Cellular component [13]
  • Cell [4]
  • Virus [1]

Organism

  • Danio rerio [9]
  • Chlamydomonas reinhardtii [4]
  • Neospora caninum [3]
  • Mycobacterium phage bxb1 [1]
  • Homo sapiens [1]

EM Method

  • Subtomogram averaging [18]

Resolution

  • ≥ 8Å and < 12Å [1]
  • ≥ 16Å and < 20Å [3]
  • ≥ 20Å and < 30Å [6]
  • ≥ 30Å [8]

Release Date

  • 2025 [1]
  • 2024 [5]
  • 2023 [12]

Author by name

  • Kikkawa M [9]
  • Morikawa M [9]
  • Yamaguchi H [9]
  • Alvarez Viar G [4]
  • Bolognini D [4]
  • Capasso P [4]
  • Klena N [4]
  • Martino F [4]
  • Nievergelt AP [4]
  • Pigino G [4]
  • Cai K [3]
  • Gui L [3]
  • Nicastro D [3]
  • O Shaughnessy Wj [3]
  • Reese ML [3]
  • Reetz E [3]
  • Amorim MJ [1]
  • Chlanda P [1]
  • Conway JF [1]
  • Freeman KG [1]
  • Hatfull GF [1]
  • Ho MC [1]
  • Huet A [1]
  • Jacobs-sera D [1]
  • Lowary TL [1]
  • Macale LS [1]
  • Makroczyova J [1]
  • Mondal S [1]
  • Narsico JT [1]
  • Ortiz V [1]
  • Park D [1]
  • Perez RJ [1]
  • Peterl S [1]
  • Podgorski J [1]
  • Silva BH [1]
  • Vale-costa S [1]
  • Wachsmuth-melm M [1]
  • White SJ [1]

Author by ORCID

  • Kikkawa M [9]
  • Yamaguchi H [9]
  • Morikawa M [9]
  • Capasso P [4]
  • Reese ML [3]
  • Nicastro D [3]
  • Gui L [3]
  • Cai K [3]
  • O'shaughnessy WJ [3]
  • Makroczyova J [1]
  • Vale-costa S [1]
  • Mondal S [1]
  • Amorim MJ [1]
  • Conway JF [1]
  • Chlanda P [1]
  • Peterl S [1]
  • Wachsmuth-melm M [1]

Journal

  • ELIFE [9]
  • CURR BIOL [4]
  • NAT COMMUN [3]
  • CELL [1]
  • TO BE PUBLISHED [1]

Software

  • IMOD [9]
  • PEET [9]
  • DYNAMO [1]
  • EMAN2 [1]

Microscope

  • TFS KRIOS [10]
  • FEI TITAN [4]
  • FEI TITAN KRIOS [4]

Electron Source

  • FIELD EMISSION GUN [18]

Film or detector model

  • GATAN K3 6K X 4K [10]
  • GATAN K2 SUMMIT 4K X 4K [4]
  • GATAN K3 BIOQUANTUM 6K X 4K [4]

External links

  • EMPIAR [1]