Electron Microscopy Data Bank

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grant_funding_details:"European Molecular Biology Organization (EMBO)"

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Current Database

Current status

Sample type

Organism

Homo sapiens [335]
Mus musculus [61]
Escherichia coli [49]
Synthetic construct [41]
Dictyostelium discoideum [33]
Saccharomyces cerevisiae [29]
Neurospora crassa [27]
Sus scrofa [23]
Chlamydomonas reinhardtii [22]
Escherichia coli [22]
Lama glama [19]
Toxoplasma gondii [9]
Oryctolagus cuniculus [9]
Tetrahymena thermophila [8]
Rattus norvegicus [7]
Aquifex aeolicus [7]
Pseudomonas oleovorans [7]
Solanum lycopersicum [7]
Gallus gallus [7]
Human immunodeficiency virus 1 [5]
Corynebacterium glutamicum [5]
Photorhabdus thracensis [5]
Arabidopsis thaliana [5]
Saccharomyces cerevisiae [5]
Zaire ebolavirus [4]
Neurospora crassa [4]
Klebsiella pneumoniae [4]
Spodoptera frugiperda [4]
Sus scrofa [4]
Rhodobacter capsulatus [3]
Dna molecule [3]
Scytonema hofmannii [3]
Danio rerio [3]
Escherichia virus t7 [2]
(no species) [2]
Severe acute respiratory syndrome coronavirus [2]
Rhodobacter capsulatus [2]
Marburg marburgvirus [2]
Trypanosoma brucei [2]
Trypanosoma brucei [2]
Xenopus laevis [2]
Enterobacteria phage fd [1]
Saccharomyces cerevisiae [1]
Clostridioides difficile [1]
Severe acute respiratory syndrome coronavirus [1]
Polytomella sp. pringsheim 198.80 [1]
Bacteriophage sp. [1]
Alphainfluenzavirus influenzae [1]
Acetivibrio thermocellus [1]
Apis mellifera [1]
Capra hircus [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Klinge S [158]
Vanden Broeck A [156]
Amunts A [62]
Rappsilber J [55]
Itoh Y [51]
Takacs M [48]
Webster MW [48]
Weixlbaumer A [48]
Graziadei A [42]
Charles K [41]
Chauvier A [41]
Miropolskaya N [41]
Rahil H [41]
Saint-andre C [41]
Walter NG [41]
Beck M [38]
Hoffmann PC [38]
Obarska-kosinska A [38]
Raunser S [37]
Chaker-margot M [35]
Naschberger A [35]
Wang J [34]
Andino-frydman E [33]
Cernikova L [33]
Chait BT [33]
Cruz-leon S [33]
Hummer G [33]
Kim H [33]
Kosinski J [33]
Kreysing JP [33]
Margiotta E [33]
Miller L [33]
Singh S [33]
Turonova B [33]
Shi Y [32]
Duquette M [31]
Echeverria I [31]
Fernandez-martinez J [31]
Gautel M [31]
Grange M [31]
Guo Q [31]
Herrmann JM [31]
Hutchings J [31]
Kho AL [31]
Li Z [31]
Molloy K [31]
Mortezaei N [31]
Rout MP [31]
Sali A [31]
Shaikh F [31]
Singh D [31]
Soni N [31]
Suslov S [31]
Villa E [31]
Wagner T [31]
Wang Z [31]
Van Eeuwen T [31]
Ban N [30]
Lenarcic T [23]
Singh V [23]
Carter AP [21]
Pigino G [20]
Scaiola A [19]
Schoenhut T [19]
Wan W [18]
Ghanim GE [17]
Leibundgut M [17]
Nguyen THD [17]
Pospich S [17]
Aibara S [16]
Bennett P [16]
Rees M [16]
Saurer M [16]
Stabrin M [16]
Tacke S [16]
Tamborrini D [16]
Fin L [15]
Pacheco-fiallos B [15]
Plaschka C [15]
Riabov-bassat D [15]
Schellhaas U [15]
Aricescu AR [14]
Barrientos A [14]
Filipovska A [14]
Kasaragod VB [14]
Lee RG [14]
Rackham O [14]
Schonhut T [14]
Engel BD [13]
Kummer E [13]
Righetto RD [13]
Van Den Hoek H [13]
Alvarez Viar G [12]
Baumeister W [12]
Erdmann PS [12]
Gama JB [12]
Gassmann R [12]
Geimer S [12]
Guichard P [12]
Hamel V [12]

Author by ORCID

Klinge S [158]
Vanden Broeck A [156]
Amunts A [60]
Rappsilber J [55]
Itoh Y [51]
Webster MW [48]
Takacs M [48]
Weixlbaumer A [48]
Graziadei A [41]
Charles K [41]
Walter NG [41]
Saint-andre C [41]
Rahil H [41]
Chauvier A [41]
Raunser S [37]
Chaker-margot M [34]
Singh S [33]
Miller L [33]
Obarska-kosinska A [33]
Hummer G [33]
Kosinski J [33]
Kreysing JP [33]
Hoffmann PC [33]
Andino-frydman E [33]
Naschberger A [32]
Wang Z [31]
Herrmann JM [31]
Grange M [31]
Guo Q [31]
Gautel M [31]
Echeverria I [31]
Wagner T [27]
Kho AL [27]
Carter AP [21]
Singh V [21]
Pigino G [20]
Wan W [18]
Nguyen THD [17]
Ghanim GE [17]
Pospich S [17]
Saurer M [16]
Tamborrini D [16]
Ban N [16]
Pacheco-fiallos B [15]
Plaschka C [15]
Schellhaas U [15]
Lee RG [14]
Rackham O [14]
Filipovska A [14]
Scaiola A [14]
Engel BD [13]
Kasaragod VB [13]
Kummer E [13]
Aricescu AR [13]
Righetto RD [13]
Hamel V [12]
Geimer S [12]
Jordan MA [12]
Baumeister W [12]
Erdmann PS [12]
Schaffer M [12]
Gassmann R [12]
Guichard P [12]
Klena N [12]
Plitzko JM [12]
Gama JB [12]
Singh K [12]
Lau CK [12]
Van Den Hoek H [12]
Steube N [11]
Pausch P [11]
Randau L [11]
Roitinger E [11]
Skorupskaite A [11]
Benz F [11]
Miksys A [11]
Hochberg GKA [11]
Malinauskaite L [11]
Pinilla-redondo R [11]
Klein N [11]
Ragozius V [11]
Zvejyte G [11]
Becker H [11]
Taoka M [10]
Vorlander MK [10]
O'reilly FJ [10]
Boehringer D [10]
Chaaban S [9]
Moran JC [9]
Churchman LS [9]
Von Appen A [8]
Modelska A [8]
Jaskolowski M [8]
Franco-echevarria E [8]
Das R [8]
Sekne Z [8]
Hippler M [8]
Ludzia P [8]
Foster HE [8]
Yu H [8]

Journal

Software

Microscope

Electron Source

Film or detector model

External links

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EMD-49373

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CryoEM Structure of De Novo Antibody Fragment scFv 6 with C. difficile Toxin B TcdB

Release date: Nov. 12, 2025
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9nfu
Q-score: 0.453

Bennett NR, Watson JL, Ragotte RJ, Borst AJ, See DL, Weidle C, Biswas R, Yu Y, Shrock EL, Ault R, Leung PJY, Huang B, Goreshnik I, Tam J, Carr KD, Singer B, Criswell C, Wicky BIM, Vafeados D, Garcia Sanchez M, Kim HM, Vazquez Torres S, Chan S, Sun SM, Spear TT, Sun Y, O'Reilly K, Maris JM, Sgourakis NG, Melnyk RA, Liu CC, Baker D

Nature (2025) [ Pubmed: 41193805 DOI: doi:10.1038/s41586-025-09721-5 ]

EMD-49405

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CryoEM Structure of De Novo VHH, VHH_flu_01, bound to influenza HA, strain A/USA:Iowa/1943 H1N1

Release date: Nov. 12, 2025
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 9nh7
Q-score: 0.4

Nature (2025) [ Pubmed: 41193805 DOI: doi:10.1038/s41586-025-09721-5 ]

EMD-51980

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a5b3 GABAA Receptor resting state

Release date: Nov. 12, 2025
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 9haa
Q-score: 0.521

Cowgill J, Fan C, Howard RJ, Lindahl E

To Be Published

EMD-54657

Composite map

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Composite map of the A. thaliana nuclera pore complex

Release date: Nov. 12, 2025
Resolution: 33.0 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9sob

Sanchez Carrillo IB, Hoffmann PC, Obarska-Kosinska A, Fourcassie V, Beck M, Germain H

Nat Plants (2025) 11 pp. 2368-2380 [ Pubmed: 41174229 DOI: doi:10.1038/s41477-025-02138-y ]

EMD-54653

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Asymmetric subunit of the A. thaliana nuclear pore complex

Release date: Nov. 5, 2025
Resolution: 39.0 Å
EM Method: Subtomogram averaging

Sanchez Carrillo IB, Hoffmann PC, Obarska-Kosinska A, Fourcassie V, Beck M, Germain H

Nat Plants (2025) 11 pp. 2368-2380 [ Pubmed: 41174229 DOI: doi:10.1038/s41477-025-02138-y ]

EMD-54654

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Inner ring segment of the A. thaliana nuclear pore complex

Release date: Nov. 5, 2025
Resolution: 33.0 Å
EM Method: Subtomogram averaging

Sanchez Carrillo IB, Hoffmann PC, Obarska-Kosinska A, Fourcassie V, Beck M, Germain H

Nat Plants (2025) 11 pp. 2368-2380 [ Pubmed: 41174229 DOI: doi:10.1038/s41477-025-02138-y ]

EMD-54655

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Cytoplasmic ring segment of the A. thaliana nuclear pore complex

Release date: Nov. 5, 2025
Resolution: 33.0 Å
EM Method: Subtomogram averaging

Sanchez Carrillo IB, Hoffmann PC, Obarska-Kosinska A, Fourcassie V, Beck M, Germain H

Nat Plants (2025) 11 pp. 2368-2380 [ Pubmed: 41174229 DOI: doi:10.1038/s41477-025-02138-y ]

EMD-54656

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Nuclear ring segment of the A. thaliana nuclear pore complex

Release date: Nov. 5, 2025
Resolution: 36.0 Å
EM Method: Subtomogram averaging

Sanchez Carrillo IB, Hoffmann PC, Obarska-Kosinska A, Fourcassie V, Beck M, Germain H

Nat Plants (2025) 11 pp. 2368-2380 [ Pubmed: 41174229 DOI: doi:10.1038/s41477-025-02138-y ]

EMD-53278

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The structure of the COPI leaf bound to GOLPH3

Release date: Oct. 22, 2025
Resolution: 7.5 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9qpq
Q-score: 0.235

Taylor RJ, Zubkov N, Ciazynska KA, Kaufman JGG, Tagiltsev G, Owen DJ, Briggs JAG, Munro S

Sci Adv (2025) 11 pp. eaea0016-eaea0016 [ DOI: doi:10.1126/sciadv.aea0016 Pubmed: 41042862 ]

EMD-51649

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CryoEM structure of the native Chlamydomonas reinhardtii Flagella Membrane Glycoprotein 1B. Local refinement 1 of 6.

Release date: Aug. 6, 2025
Resolution: 3.42 Å
EM Method: Single-particle

Hoepfner LM, Nievergelt AP, Matrino F, Scholz M, Foster HE, Rodenfels J, von Appen A, Hippler M, Pigino G

Adv Sci (2025) 12 pp. e2413355-e2413355 [ Pubmed: 40041987 DOI: doi:10.1002/advs.202413355 ]

Sort by: Download

Showing 1 - 10 of 673. Page 1 of 68

Display:

Statistics

Download

Select database:

EMDB [673]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [335]
Mus musculus [61]
Escherichia coli [49]
Synthetic construct [41]
Dictyostelium discoideum [33]
Saccharomyces cerevisiae [29]
Neurospora crassa [27]
Sus scrofa [23]
Chlamydomonas reinhardtii [22]
Escherichia coli [22]
Lama glama [19]
Toxoplasma gondii [9]
Oryctolagus cuniculus [9]
Tetrahymena thermophila [8]
Rattus norvegicus [7]
Aquifex aeolicus [7]
Pseudomonas oleovorans [7]
Solanum lycopersicum [7]
Gallus gallus [7]
Human immunodeficiency virus 1 [5]
Corynebacterium glutamicum [5]
Photorhabdus thracensis [5]
Arabidopsis thaliana [5]
Saccharomyces cerevisiae [5]
Zaire ebolavirus [4]
Neurospora crassa [4]
Klebsiella pneumoniae [4]
Spodoptera frugiperda [4]
Sus scrofa [4]
Rhodobacter capsulatus [3]
Dna molecule [3]
Scytonema hofmannii [3]
Danio rerio [3]
Escherichia virus t7 [2]
(no species) [2]
Severe acute respiratory syndrome coronavirus [2]
Rhodobacter capsulatus [2]
Marburg marburgvirus [2]
Trypanosoma brucei [2]
Trypanosoma brucei [2]
Xenopus laevis [2]
Enterobacteria phage fd [1]
Saccharomyces cerevisiae [1]
Clostridioides difficile [1]
Severe acute respiratory syndrome coronavirus [1]
Polytomella sp. pringsheim 198.80 [1]
Bacteriophage sp. [1]
Alphainfluenzavirus influenzae [1]
Acetivibrio thermocellus [1]
Apis mellifera [1]
Capra hircus [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Klinge S [158]
Vanden Broeck A [156]
Amunts A [62]
Rappsilber J [55]
Itoh Y [51]
Takacs M [48]
Webster MW [48]
Weixlbaumer A [48]
Graziadei A [42]
Charles K [41]
Chauvier A [41]
Miropolskaya N [41]
Rahil H [41]
Saint-andre C [41]
Walter NG [41]
Beck M [38]
Hoffmann PC [38]
Obarska-kosinska A [38]
Raunser S [37]
Chaker-margot M [35]
Naschberger A [35]
Wang J [34]
Andino-frydman E [33]
Cernikova L [33]
Chait BT [33]
Cruz-leon S [33]
Hummer G [33]
Kim H [33]
Kosinski J [33]
Kreysing JP [33]
Margiotta E [33]
Miller L [33]
Singh S [33]
Turonova B [33]
Shi Y [32]
Duquette M [31]
Echeverria I [31]
Fernandez-martinez J [31]
Gautel M [31]
Grange M [31]
Guo Q [31]
Herrmann JM [31]
Hutchings J [31]
Kho AL [31]
Li Z [31]
Molloy K [31]
Mortezaei N [31]
Rout MP [31]
Sali A [31]
Shaikh F [31]
Singh D [31]
Soni N [31]
Suslov S [31]
Villa E [31]
Wagner T [31]
Wang Z [31]
Van Eeuwen T [31]
Ban N [30]
Lenarcic T [23]
Singh V [23]
Carter AP [21]
Pigino G [20]
Scaiola A [19]
Schoenhut T [19]
Wan W [18]
Ghanim GE [17]
Leibundgut M [17]
Nguyen THD [17]
Pospich S [17]
Aibara S [16]
Bennett P [16]
Rees M [16]
Saurer M [16]
Stabrin M [16]
Tacke S [16]
Tamborrini D [16]
Fin L [15]
Pacheco-fiallos B [15]
Plaschka C [15]
Riabov-bassat D [15]
Schellhaas U [15]
Aricescu AR [14]
Barrientos A [14]
Filipovska A [14]
Kasaragod VB [14]
Lee RG [14]
Rackham O [14]
Schonhut T [14]
Engel BD [13]
Kummer E [13]
Righetto RD [13]
Van Den Hoek H [13]
Alvarez Viar G [12]
Baumeister W [12]
Erdmann PS [12]
Gama JB [12]
Gassmann R [12]
Geimer S [12]
Guichard P [12]
Hamel V [12]

Author by ORCID

Klinge S [158]
Vanden Broeck A [156]
Amunts A [60]
Rappsilber J [55]
Itoh Y [51]
Webster MW [48]
Takacs M [48]
Weixlbaumer A [48]
Graziadei A [41]
Charles K [41]
Walter NG [41]
Saint-andre C [41]
Rahil H [41]
Chauvier A [41]
Raunser S [37]
Chaker-margot M [34]
Singh S [33]
Miller L [33]
Obarska-kosinska A [33]
Hummer G [33]
Kosinski J [33]
Kreysing JP [33]
Hoffmann PC [33]
Andino-frydman E [33]
Naschberger A [32]
Wang Z [31]
Herrmann JM [31]
Grange M [31]
Guo Q [31]
Gautel M [31]
Echeverria I [31]
Wagner T [27]
Kho AL [27]
Carter AP [21]
Singh V [21]
Pigino G [20]
Wan W [18]
Nguyen THD [17]
Ghanim GE [17]
Pospich S [17]
Saurer M [16]
Tamborrini D [16]
Ban N [16]
Pacheco-fiallos B [15]
Plaschka C [15]
Schellhaas U [15]
Lee RG [14]
Rackham O [14]
Filipovska A [14]
Scaiola A [14]
Engel BD [13]
Kasaragod VB [13]
Kummer E [13]
Aricescu AR [13]
Righetto RD [13]
Hamel V [12]
Geimer S [12]
Jordan MA [12]
Baumeister W [12]
Erdmann PS [12]
Schaffer M [12]
Gassmann R [12]
Guichard P [12]
Klena N [12]
Plitzko JM [12]
Gama JB [12]
Singh K [12]
Lau CK [12]
Van Den Hoek H [12]
Steube N [11]
Pausch P [11]
Randau L [11]
Roitinger E [11]
Skorupskaite A [11]
Benz F [11]
Miksys A [11]
Hochberg GKA [11]
Malinauskaite L [11]
Pinilla-redondo R [11]
Klein N [11]
Ragozius V [11]
Zvejyte G [11]
Becker H [11]
Taoka M [10]
Vorlander MK [10]
O'reilly FJ [10]
Boehringer D [10]
Chaaban S [9]
Moran JC [9]
Churchman LS [9]
Von Appen A [8]
Modelska A [8]
Jaskolowski M [8]
Franco-echevarria E [8]
Das R [8]
Sekne Z [8]
Hippler M [8]
Ludzia P [8]
Foster HE [8]
Yu H [8]

Journal

Software

Microscope

Electron Source

Film or detector model

External links