Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!

Edit your search query here and hit Return to execute it:
grant_code:"Simons Foundation / SF349247"

Filter By

Current Database

  • EMDB [5]

Current status

  • REL [5]

Sample type

  • Complex [5]
  • Protein [1]

Organism

  • Drosophila melanogaster [3]
  • (no species) [1]
  • Mus musculus [1]
  • Thermoplasma acidophilum [1]

EM Method

  • Single-particle [4]
  • Subtomogram averaging [1]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [3]
  • ≥ 30Å [1]

Release Date

  • 2019 [4]
  • 2018 [1]

Author by name

  • Bepler T [5]
  • Berger B [5]
  • Brasch J [5]
  • Noble AJ [5]
  • Shapiro L [5]
  • Morin A [4]
  • Rapp M [4]
  • Bahna F [1]
  • Carragher B [1]
  • Dandey VP [1]
  • Goodman KM [1]
  • Honig B [1]
  • Maniatis T [1]
  • Mannepalli S [1]
  • Potter CS [1]

Author by ORCID

  • Bepler T [5]
  • Noble AJ [4]
  • Berger B [3]

Journal

  • NAT METHODS [3]
  • NATURE [1]
  • RES COMPUT MOL BIOL [1]

Software

  • CRYOSPARC [4]
  • CTFFIND [3]
  • DYNAMO [1]

Microscope

  • FEI TITAN KRIOS [5]

Electron Source

  • FIELD EMISSION GUN [5]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [5]

External links

  • EMPIAR [4]
  • AlphaFold DB [1]
  • PDBe-Kb [1]
  • UniProt [1]
Sort by: Download
Showing 1 - 5 of 5. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download
EMD-20529
Download Map
3D View
Raw data
EMPIAR-10215
Toll receptor EM map from DoG picks
Release date: Sept. 11, 2019
Resolution: 3.86 Å
EM Method: Single-particle

Bepler T, Morin A, Rapp M, Brasch J, Shapiro L, Noble AJ, Berger B

Nat Methods (2019) 16 pp. 1153-1160 [ DOI: doi:10.1038/s41592-019-0575-8 Pubmed: 31591578 ]

EMD-20531
Download Map
3D View
Raw data
EMPIAR-10215
Toll receptor EM map from template picks
Release date: Sept. 11, 2019
Resolution: 3.92 Å
EM Method: Single-particle

Bepler T, Morin A, Rapp M, Brasch J, Shapiro L, Noble AJ, Berger B

Nat Methods (2019) 16 pp. 1153-1160 [ DOI: doi:10.1038/s41592-019-0575-8 Pubmed: 31591578 ]

EMD-20532
Download Map
3D View
Raw data
EMPIAR-10215
Toll receptor EM map from Topaz picks
Release date: Sept. 11, 2019
Resolution: 3.7 Å
EM Method: Single-particle

Bepler T, Morin A, Rapp M, Brasch J, Shapiro L, Noble AJ, Berger B

Nat Methods (2019) 16 pp. 1153-1160 [ DOI: doi:10.1038/s41592-019-0575-8 Pubmed: 31591578 ]

EMD-9197
Download Map
3D View
Raw data
EMPIAR-10235 EMPIAR-10234
Mouse Protocadherin gamma B6 dimer-of-dimers
Release date: April 17, 2019
Resolution: 35.0 Å
EM Method: Subtomogram averaging

Brasch J, Goodman KM, Noble AJ, Rapp M, Mannepalli S, Bahna F, Dandey VP, Bepler T, Berger B, Maniatis T, Potter CS, Carragher B, Honig B, Shapiro L

Nature (2019) 569 pp. 280-283 [ Pubmed: 30971825 DOI: doi:10.1038/s41586-019-1089-3 ]

EMD-9194
Download Map
3D View
T20S proteasome using Topaz at threshold t-3 EMPIAR-10025 reprocessing
Release date: Oct. 24, 2018
Resolution: 2.83 Å
EM Method: Single-particle

Bepler T, Morin A, Noble AJ, Brasch J, Shapiro L, Berger B

Res Comput Mol Biol (2018) 10812 pp. 245-247 [ Pubmed: 29707703 ]

Sort by: Download
Showing 1 - 5 of 5. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [5]

Current status

  • REL [5]

Sample type

  • Complex [5]
  • Protein [1]

Organism

  • Drosophila melanogaster [3]
  • (no species) [1]
  • Mus musculus [1]
  • Thermoplasma acidophilum [1]

EM Method

  • Single-particle [4]
  • Subtomogram averaging [1]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [3]
  • ≥ 30Å [1]

Release Date

  • 2019 [4]
  • 2018 [1]

Author by name

  • Bepler T [5]
  • Berger B [5]
  • Brasch J [5]
  • Noble AJ [5]
  • Shapiro L [5]
  • Morin A [4]
  • Rapp M [4]
  • Bahna F [1]
  • Carragher B [1]
  • Dandey VP [1]
  • Goodman KM [1]
  • Honig B [1]
  • Maniatis T [1]
  • Mannepalli S [1]
  • Potter CS [1]

Author by ORCID

  • Bepler T [5]
  • Noble AJ [4]
  • Berger B [3]

Journal

  • NAT METHODS [3]
  • NATURE [1]
  • RES COMPUT MOL BIOL [1]

Software

  • CRYOSPARC [4]
  • CTFFIND [3]
  • DYNAMO [1]

Microscope

  • FEI TITAN KRIOS [5]

Electron Source

  • FIELD EMISSION GUN [5]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [5]

External links

  • EMPIAR [4]
  • AlphaFold DB [1]
  • PDBe-Kb [1]
  • UniProt [1]