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grant_code:"SFB740"

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Current Database

  • EMDB [12]

Current status

  • REL [12]

Sample type

  • Complex [12]
  • Protein [12]
  • RNA [12]
  • Ligand [7]
  • DNA [1]

Organism

  • Escherichia coli [10]
  • Escherichia coli [2]
  • Escherichia phage lambda [1]
  • Escherichia coli [1]

EM Method

  • Single-particle [12]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [6]
  • ≥ 4Å and < 5Å [4]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 500-1000 kDa [1]
  • 1-2 MDa [11]

Release Date

  • 2021 [5]
  • 2018 [6]
  • 2017 [1]

Author by name

  • Burger J [12]
  • Loerke J [12]
  • Mielke T [12]
  • Spahn CMT [12]
  • Hilal T [11]
  • Nikolay R [11]
  • Qin B [11]
  • Nierhaus KH [6]
  • Textoris-taube K [6]
  • Amikura K [5]
  • Deuerling E [5]
  • Flugel T [5]
  • Schmidt S [5]
  • Schwefel D [5]
  • Selbach M [5]
  • Ueda T [5]
  • Vieira-vieira CH [5]
  • Anedchenko E [1]
  • Behrmann E [1]
  • Dybkov O [1]
  • Huang YH [1]
  • Krupp F [1]
  • Lee CT [1]
  • Loll B [1]
  • Said N [1]
  • Santos KF [1]
  • Urlaub H [1]
  • Wahl MC [1]
  • Weber G [1]

Author by ORCID

  • Loerke J [12]
  • Burger J [12]
  • Qin B [11]
  • Hilal T [11]
  • Nikolay R [11]
  • Vieira-vieira CH [5]
  • Ueda T [5]
  • Behrmann E [1]
  • Loll B [1]
  • Said N [1]
  • Krupp F [1]
  • Wahl MC [1]
  • Weber G [1]

Journal

  • MOL CELL [11]
  • NAT MICROBIOL [1]

Software

  • SPIDER [6]
  • CISTEM [5]
  • CRYOSPARC [4]
  • CTFFIND [1]

Microscope

  • FEI POLARA 300 [10]
  • FEI TALOS ARCTICA [1]
  • FEI TITAN KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [12]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [10]
  • FEI FALCON III 4K X 4K [2]

External links

  • AlphaFold DB [12]
  • Gene Ontology [12]
  • InterPro [12]
  • PDB [12]
  • PDBe-Kb [12]
  • Pfam [12]
  • UniProt [12]
  • Complex Portal [11]
  • ChEBI [7]
  • ChEMBL [7]
  • DrugBank [7]
  • CATH [3]
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Showing 1 - 10 of 12. Page 1 of 2
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EMD-12215
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3D View
pre-50S-ObgE particle state 1
Release date: May 12, 2021
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7bl2
Q-score: 0.328

Nikolay R, Hilal T, Schmidt S, Qin B, Schwefel D, Vieira-Vieira CH, Mielke T, Burger J, Loerke J, Amikura K, Flugel T, Ueda T, Selbach M, Deuerling E, Spahn CMT

Mol Cell (2021) 81 pp. 1200-1215.e9 [ Pubmed: 33639093 DOI: doi:10.1016/j.molcel.2021.02.006 ]

EMD-12216
Download Map
3D View
pre-50S-ObgE particle state 2
Release date: May 12, 2021
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7bl3
Q-score: 0.362

Nikolay R, Hilal T, Schmidt S, Qin B, Schwefel D, Vieira-Vieira CH, Mielke T, Burger J, Loerke J, Amikura K, Flugel T, Ueda T, Selbach M, Deuerling E, Spahn CMT

Mol Cell (2021) 81 pp. 1200-1215.e9 [ Pubmed: 33639093 DOI: doi:10.1016/j.molcel.2021.02.006 ]

EMD-12217
Download Map
3D View
in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particle
Release date: May 12, 2021
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 7bl4
Q-score: 0.492

Nikolay R, Hilal T, Schmidt S, Qin B, Schwefel D, Vieira-Vieira CH, Mielke T, Burger J, Loerke J, Amikura K, Flugel T, Ueda T, Selbach M, Deuerling E, Spahn CMT

Mol Cell (2021) 81 pp. 1200-1215.e9 [ Pubmed: 33639093 DOI: doi:10.1016/j.molcel.2021.02.006 ]

EMD-12218
Download Map
3D View
pre-50S-ObgE particle
Release date: May 12, 2021
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7bl5
Q-score: 0.363

Nikolay R, Hilal T, Schmidt S, Qin B, Schwefel D, Vieira-Vieira CH, Mielke T, Burger J, Loerke J, Amikura K, Flugel T, Ueda T, Selbach M, Deuerling E, Spahn CMT

Mol Cell (2021) 81 pp. 1200-1215.e9 [ Pubmed: 33639093 DOI: doi:10.1016/j.molcel.2021.02.006 ]

EMD-12219
Download Map
3D View
50S-ObgE-GMPPNP particle
Release date: May 12, 2021
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7bl6
Q-score: 0.289

Nikolay R, Hilal T, Schmidt S, Qin B, Schwefel D, Vieira-Vieira CH, Mielke T, Burger J, Loerke J, Amikura K, Flugel T, Ueda T, Selbach M, Deuerling E, Spahn CMT

Mol Cell (2021) 81 pp. 1200-1215.e9 [ Pubmed: 33639093 DOI: doi:10.1016/j.molcel.2021.02.006 ]

EMD-4380
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50S ribosomal subunit assembly intermediate state 3
Release date: July 4, 2018
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 6gc4
Q-score: 0.262

Nikolay R, Hilal T, Qin B, Mielke T, Burger J, Loerke J, Textoris-Taube K, Nierhaus KH, Spahn CMT

Mol Cell (2018) 70 pp. 881-893.e3 [ DOI: doi:10.1016/j.molcel.2018.05.003 Pubmed: 29883607 ]

EMD-4381
Download Map
3D View
50S ribosomal subunit assembly intermediate state 2
Release date: July 4, 2018
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 6gc6
Q-score: 0.261

Nikolay R, Hilal T, Qin B, Mielke T, Burger J, Loerke J, Textoris-Taube K, Nierhaus KH, Spahn CMT

Mol Cell (2018) 70 pp. 881-893.e3 [ DOI: doi:10.1016/j.molcel.2018.05.003 Pubmed: 29883607 ]

EMD-4378
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3D View
50S ribosomal subunit assembly intermediate state 5
Release date: June 20, 2018
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6gbz
Q-score: 0.339

Nikolay R, Hilal T, Qin B, Mielke T, Burger J, Loerke J, Textoris-Taube K, Nierhaus KH, Spahn CMT

Mol Cell (2018) 70 pp. 881-893.e3 [ DOI: doi:10.1016/j.molcel.2018.05.003 Pubmed: 29883607 ]

EMD-4379
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3D View
50S ribosomal subunit assembly intermediate state 4
Release date: June 20, 2018
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6gc0
Q-score: 0.341

Nikolay R, Hilal T, Qin B, Mielke T, Burger J, Loerke J, Textoris-Taube K, Nierhaus KH, Spahn CMT

Mol Cell (2018) 70 pp. 881-893.e3 [ DOI: doi:10.1016/j.molcel.2018.05.003 Pubmed: 29883607 ]

EMD-4382
Download Map
3D View
50S ribosomal subunit assembly intermediate state 1
Release date: June 20, 2018
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 6gc7
Q-score: 0.278

Nikolay R, Hilal T, Qin B, Mielke T, Burger J, Loerke J, Textoris-Taube K, Nierhaus KH, Spahn CMT

Mol Cell (2018) 70 pp. 881-893.e3 [ DOI: doi:10.1016/j.molcel.2018.05.003 Pubmed: 29883607 ]

Sort by: Download
Showing 1 - 10 of 12. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [12]

Current status

  • REL [12]

Sample type

  • Complex [12]
  • Protein [12]
  • RNA [12]
  • Ligand [7]
  • DNA [1]

Organism

  • Escherichia coli [10]
  • Escherichia coli [2]
  • Escherichia phage lambda [1]
  • Escherichia coli [1]

EM Method

  • Single-particle [12]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [6]
  • ≥ 4Å and < 5Å [4]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 500-1000 kDa [1]
  • 1-2 MDa [11]

Release Date

  • 2021 [5]
  • 2018 [6]
  • 2017 [1]

Author by name

  • Burger J [12]
  • Loerke J [12]
  • Mielke T [12]
  • Spahn CMT [12]
  • Hilal T [11]
  • Nikolay R [11]
  • Qin B [11]
  • Nierhaus KH [6]
  • Textoris-taube K [6]
  • Amikura K [5]
  • Deuerling E [5]
  • Flugel T [5]
  • Schmidt S [5]
  • Schwefel D [5]
  • Selbach M [5]
  • Ueda T [5]
  • Vieira-vieira CH [5]
  • Anedchenko E [1]
  • Behrmann E [1]
  • Dybkov O [1]
  • Huang YH [1]
  • Krupp F [1]
  • Lee CT [1]
  • Loll B [1]
  • Said N [1]
  • Santos KF [1]
  • Urlaub H [1]
  • Wahl MC [1]
  • Weber G [1]

Author by ORCID

  • Loerke J [12]
  • Burger J [12]
  • Qin B [11]
  • Hilal T [11]
  • Nikolay R [11]
  • Vieira-vieira CH [5]
  • Ueda T [5]
  • Behrmann E [1]
  • Loll B [1]
  • Said N [1]
  • Krupp F [1]
  • Wahl MC [1]
  • Weber G [1]

Journal

  • MOL CELL [11]
  • NAT MICROBIOL [1]

Software

  • SPIDER [6]
  • CISTEM [5]
  • CRYOSPARC [4]
  • CTFFIND [1]

Microscope

  • FEI POLARA 300 [10]
  • FEI TALOS ARCTICA [1]
  • FEI TITAN KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [12]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [10]
  • FEI FALCON III 4K X 4K [2]

External links

  • AlphaFold DB [12]
  • Gene Ontology [12]
  • InterPro [12]
  • PDB [12]
  • PDBe-Kb [12]
  • Pfam [12]
  • UniProt [12]
  • Complex Portal [11]
  • ChEBI [7]
  • ChEMBL [7]
  • DrugBank [7]
  • CATH [3]