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grant_code:"SB/S2/RJN-145/2015"

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Current Database

  • EMDB [10]

Current status

  • REL [10]

Sample type

  • Complex [10]
  • Protein [3]
  • Ligand [2]

Organism

  • Vibrio cholerae [3]
  • Vibrio parahaemolyticus [3]
  • Mycobacterium tuberculosis [3]
  • Escherichia coli [1]

EM Method

  • Single-particle [10]

Resolution

  • ≥ 3Å and < 4Å [2]
  • ≥ 4Å and < 5Å [6]
  • ≥ 5Å and < 6Å [2]

Model molecular weight

  • 100-250 kDa [3]

Release Date

  • 2022 [6]
  • 2021 [4]

Author by name

  • Dutta S [10]
  • Chattopadhyay K [6]
  • Mishra S [6]
  • Pramanick I [6]
  • Kumar A [4]
  • Sengupta N [4]
  • Bandyopadhyay P [3]
  • Biswas R [3]
  • Kundu N [3]
  • Laxman S [3]
  • Mondal AK [3]
  • Ps S [3]
  • Rajmani R [3]
  • Rajmani RS [3]
  • Sabarinath PS [3]
  • Singh A [3]
  • Singh S [3]
  • Sreedharan S [3]

Author by ORCID

  • Dutta S [9]
  • Mishra S [6]
  • Sengupta N [4]
  • Singh S [3]
  • Singh A [3]
  • Chattopadhyay K [3]
  • Laxman S [3]
  • Mondal AK [3]
  • Pramanick I [3]
  • Kundu N [3]
  • Bandyopadhyay P [3]
  • Ps S [3]

Journal

  • J CELL BIOL [3]
  • PROTEINS [3]
  • SCI ADV [3]
  • NANOMATERIALS (BASEL) [1]

Software

  • RELION [1]

Microscope

  • FEI TALOS ARCTICA [8]
  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [10]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [8]
  • FEI FALCON III 4K X 4K [2]

External links

  • AlphaFold DB [3]
  • Gene Ontology [3]
  • InterPro [3]
  • PDB [3]
  • PDBe-Kb [3]
  • Pfam [3]
  • UniProt [3]
  • ChEBI [1]
  • ChEMBL [1]
  • DrugBank [1]
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EMD-33411
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Supramolecular assembly of Thermostable Direct Hemolysin from Vibrio parahaemolyticus
Release date: Oct. 12, 2022
Resolution: 4.3 Å
EM Method: Single-particle

Mishra S, Kundu N, Pramanick I, Kumar A, Chattopadhyay K, Dutta S

Proteins (2023) 91 pp. 137-146 [ Pubmed: 36000388 DOI: doi:10.1002/prot.26416 ]

EMD-33412
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Wild type Thermostable Direct Hemolysin TDH from Vibrio parahaemolyticus
Release date: Oct. 12, 2022
Resolution: 4.5 Å
EM Method: Single-particle

Mishra S, Kundu N, Pramanick I, Kumar A, Chattopadhyay K, Dutta S

Proteins (2023) 91 pp. 137-146 [ Pubmed: 36000388 DOI: doi:10.1002/prot.26416 ]

EMD-33413
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N-terminal deleted NTD Thermostable Direct Hemolysin from Vibrio parahaemolyticus
Release date: Oct. 12, 2022
Resolution: 4.2 Å
EM Method: Single-particle

Mishra S, Kundu N, Pramanick I, Kumar A, Chattopadhyay K, Dutta S

Proteins (2023) 91 pp. 137-146 [ Pubmed: 36000388 DOI: doi:10.1002/prot.26416 ]

EMD-33331
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Cyo-EM model for native cystathionine beta-synthase of Mycobacterium tuberculosis.
Release date: May 25, 2022
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7xnz
Q-score: 0.486

Bandyopadhyay P, Pramanick I, Biswas R, Ps S, Sreedharan S, Singh S, Rajmani RS, Laxman S, Dutta S, Singh A

Sci Adv (2022) 8 pp. eabo0097-eabo0097 [ Pubmed: 35749503 DOI: doi:10.1126/sciadv.abo0097 ]

EMD-33348
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Cryo-EM map of cystathionine beta-synthase of Mycobacterium tuberculosis in the presence of S-adenosylmethionine.
Release date: May 25, 2022
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7xoh
Q-score: 0.502

Bandyopadhyay P, Pramanick I, Biswas R, Ps S, Sreedharan S, Singh S, Rajmani RS, Laxman S, Dutta S, Singh A

Sci Adv (2022) 8 pp. eabo0097-eabo0097 [ Pubmed: 35749503 DOI: doi:10.1126/sciadv.abo0097 ]

EMD-33363
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3D View
Cryo-EM map of cystathionine beta-synthase of Mycobacterium tuberculosis in the presence of S-adenosylmethionine and serine.
Release date: May 25, 2022
Resolution: 4.25 Å
EM Method: Single-particle
Fitted PDBs: 7xoy
Q-score: 0.39

Bandyopadhyay P, Pramanick I, Biswas R, Ps S, Sreedharan S, Singh S, Rajmani RS, Laxman S, Dutta S, Singh A

Sci Adv (2022) 8 pp. eabo0097-eabo0097 [ Pubmed: 35749503 DOI: doi:10.1126/sciadv.abo0097 ]

EMD-31972
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Cryo-EM 3D reconstruction of Vibrio cholerae Cytolysin embedded in lipid bilayer- State 3
Release date: Sept. 29, 2021
Resolution: 4.0 Å
EM Method: Single-particle

Sengupta N, Mondal AK, Mishra S, Chattopadhyay K, Dutta S

J Cell Biol (2021) 220 [ Pubmed: 34617964 DOI: doi:10.1083/jcb.202102035 ]

EMD-31973
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Cryo-EM 3D reconstruction of Vibrio cholerae Cytolysin adhered to liposome membrane surface
Release date: Sept. 29, 2021
Resolution: 5.3 Å
EM Method: Single-particle

Sengupta N, Mondal AK, Mishra S, Chattopadhyay K, Dutta S

J Cell Biol (2021) 220 [ Pubmed: 34617964 DOI: doi:10.1083/jcb.202102035 ]

EMD-31974
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Cryo-EM 3D reconstruction of Vibrio cholerae Cytolysin partially embedded in lipid bilayer- State 2
Release date: Sept. 29, 2021
Resolution: 5.6 Å
EM Method: Single-particle

Sengupta N, Mondal AK, Mishra S, Chattopadhyay K, Dutta S

J Cell Biol (2021) 220 [ Pubmed: 34617964 DOI: doi:10.1083/jcb.202102035 ]

EMD-30399
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Escherichia coli 70S Ribosome Reconstruction from Graphene Oxide Monolayer fabricated Holey Carbon grid
Release date: March 10, 2021
Resolution: 4.6 Å
EM Method: Single-particle

Kumar A, Sengupta N, Dutta S

Nanomaterials (Basel) (2021) 11 [ Pubmed: 33808009 DOI: doi:10.3390/nano11030643 ]

Sort by: Download
Showing 1 - 10 of 10. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [10]

Current status

  • REL [10]

Sample type

  • Complex [10]
  • Protein [3]
  • Ligand [2]

Organism

  • Vibrio cholerae [3]
  • Vibrio parahaemolyticus [3]
  • Mycobacterium tuberculosis [3]
  • Escherichia coli [1]

EM Method

  • Single-particle [10]

Resolution

  • ≥ 3Å and < 4Å [2]
  • ≥ 4Å and < 5Å [6]
  • ≥ 5Å and < 6Å [2]

Model molecular weight

  • 100-250 kDa [3]

Release Date

  • 2022 [6]
  • 2021 [4]

Author by name

  • Dutta S [10]
  • Chattopadhyay K [6]
  • Mishra S [6]
  • Pramanick I [6]
  • Kumar A [4]
  • Sengupta N [4]
  • Bandyopadhyay P [3]
  • Biswas R [3]
  • Kundu N [3]
  • Laxman S [3]
  • Mondal AK [3]
  • Ps S [3]
  • Rajmani R [3]
  • Rajmani RS [3]
  • Sabarinath PS [3]
  • Singh A [3]
  • Singh S [3]
  • Sreedharan S [3]

Author by ORCID

  • Dutta S [9]
  • Mishra S [6]
  • Sengupta N [4]
  • Singh S [3]
  • Singh A [3]
  • Chattopadhyay K [3]
  • Laxman S [3]
  • Mondal AK [3]
  • Pramanick I [3]
  • Kundu N [3]
  • Bandyopadhyay P [3]
  • Ps S [3]

Journal

  • J CELL BIOL [3]
  • PROTEINS [3]
  • SCI ADV [3]
  • NANOMATERIALS (BASEL) [1]

Software

  • RELION [1]

Microscope

  • FEI TALOS ARCTICA [8]
  • FEI TITAN KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [10]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [8]
  • FEI FALCON III 4K X 4K [2]

External links

  • AlphaFold DB [3]
  • Gene Ontology [3]
  • InterPro [3]
  • PDB [3]
  • PDBe-Kb [3]
  • Pfam [3]
  • UniProt [3]
  • ChEBI [1]
  • ChEMBL [1]
  • DrugBank [1]