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grant_code:"R01HL162842"

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Current Database

  • EMDB [14]

Current status

  • REL [14]

Sample type

  • Complex [12]
  • Protein [5]
  • Cell [2]
  • Ligand [2]

Organism

  • Homo sapiens [7]
  • Escherichia coli [3]
  • Escherichia coli [2]
  • Escherichia coli [2]

EM Method

  • Single-particle [7]
  • Subtomogram averaging [7]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [2]
  • ≥ 5Å and < 6Å [1]
  • ≥ 8Å and < 12Å [2]
  • ≥ 12Å and < 16Å [3]
  • ≥ 16Å and < 20Å [4]

Model molecular weight

  • 100-250 kDa [4]

Release Date

  • 2025 [4]
  • 2024 [3]
  • 2023 [5]
  • 2022 [2]

Author by name

  • Wang Z [14]
  • Huo T [12]
  • Shi X [7]
  • Wu Y [7]
  • Yu Z [7]
  • Zheng W [7]
  • Chen M [5]
  • Ludtke SJ [5]
  • Wu H [5]
  • Dalton V [3]
  • Moussa Z [3]
  • Sen M [3]
  • Cao J [2]
  • Horrigan FT [2]
  • Lonard DM [2]
  • Lumahan LEV [2]
  • Lutdke SJ [2]
  • Lydon JP [2]
  • O Malley Bw [2]
  • Panigrahi AK [2]
  • Ren Q [2]
  • Sun L [2]
  • Wan Z [2]
  • Wensel TG [2]
  • Yi P [2]
  • Yu X [2]
  • Zhang W [2]

Author by ORCID

  • Wang Z [14]
  • Ludtke SJ [5]
  • Chen M [5]
  • Horrigan FT [2]
  • Yi P [2]
  • Shi X [2]
  • Sun L [2]
  • Cao J [2]
  • Wensel TG [2]

Journal

  • NAT COMMUN [7]
  • STRUCTURE [3]
  • COMMUN BIOL [2]
  • ISCIENCE [2]

Software

  • CRYOSPARC [2]
  • EMAN2 [2]
  • RELION [2]

Microscope

  • FEI TITAN KRIOS [8]
  • TFS GLACIOS [4]
  • TFS KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [14]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [8]
  • FEI FALCON IV 4K X 4K [4]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]

External links

  • AlphaFold DB [5]
  • PDBe-Kb [5]
  • UniProt [5]
  • Gene Ontology [4]
  • InterPro [4]
  • PDB [4]
  • Pfam [4]
  • Complex Portal [3]
  • ChEBI [2]
  • ChEMBL [2]
  • DrugBank [2]
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Showing 1 - 10 of 14. Page 1 of 2
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EMD-45656
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3D View
Cryo-EM map of human XPR1 in apo state
Release date: June 18, 2025
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 9ckz
Q-score: 0.389

Wu H, Sun L, Huo T, Wensel TG, Horrigan FT, Wang Z

Nat Commun (2025) 16 pp. 4519-4519 [ Pubmed: 40374661 DOI: doi:10.1038/s41467-025-59678-2 ]

EMD-45657
Download Map
3D View
Cryo-EM map of human XPR1 in presence of inorganic phosphate and phytic acid
Release date: June 18, 2025
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 9cl0
Q-score: 0.639

Wu H, Sun L, Huo T, Wensel TG, Horrigan FT, Wang Z

Nat Commun (2025) 16 pp. 4519-4519 [ Pubmed: 40374661 DOI: doi:10.1038/s41467-025-59678-2 ]

EMD-44384
Download Map
3D View
The in situ structure of MacAB-TolC in native state
Release date: May 7, 2025
Resolution: 14.0 Å
EM Method: Subtomogram averaging

Huo T, Zhang W, Yu Z, Zheng W, Wu Y, Ren Q, Wan Z, Cao J, Wang Z, Shi X

Commun Biol (2025) 8 pp. 848-848 [ DOI: doi:10.1038/s42003-025-08236-z Pubmed: 40461577 ]

EMD-44385
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3D View
The in situ structure of MacAB-TolC in erythromycin-present state
Release date: May 7, 2025
Resolution: 12.0 Å
EM Method: Subtomogram averaging

Huo T, Zhang W, Yu Z, Zheng W, Wu Y, Ren Q, Wan Z, Cao J, Wang Z, Shi X

Commun Biol (2025) 8 pp. 848-848 [ DOI: doi:10.1038/s42003-025-08236-z Pubmed: 40461577 ]

EMD-43046
Download Map
3D View
Full length integrin AlphaIIbBeta3 in pre-active state
Release date: July 24, 2024
Resolution: 5.46 Å
EM Method: Single-particle

Huo T, Wu H, Moussa Z, Sen M, Dalton V, Wang Z

Structure (2024) 32 pp. 899-906.e3 [ Pubmed: 38579706 DOI: doi:10.1016/j.str.2024.03.006 ]

EMD-29931
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3D View
Full length Integrin AlphaIIbBeta3 in inactive state
Release date: March 6, 2024
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 8gcd
Q-score: 0.409

Huo T, Wu H, Moussa Z, Sen M, Dalton V, Wang Z

Structure (2024) 32 pp. 899- [ Pubmed: 38579706 DOI: doi:10.1016/j.str.2024.03.006 ]

EMD-29932
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3D View
The Extracellular Domain of Integrin AlphaIIbBeta3 in Intermediate State
Release date: March 6, 2024
Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 8gce
Q-score: 0.28

Huo T, Wu H, Moussa Z, Sen M, Dalton V, Wang Z

Structure (2024) 32 pp. 899- [ Pubmed: 38579706 DOI: doi:10.1016/j.str.2024.03.006 ]

EMD-29696
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3D View
In situ structure of GspD-beta-GspS complex on the bacterial outer membrane
Release date: Dec. 13, 2023
Resolution: 19.0 Å
EM Method: Subtomogram averaging

Yu Z, Wu Y, Chen M, Huo T, Zheng W, Ludtke SJ, Shi X, Wang Z

Nat Commun (2023) 14 pp. 4025-4025 [ DOI: doi:10.1038/s41467-023-39583-2 Pubmed: 37419909 ]

EMD-29697
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3D View
In situ structure of GspD-beta-GspS complex on the bacterial outer membrane when GspD-beta is overexpressed solely
Release date: Dec. 13, 2023
Resolution: 16.0 Å
EM Method: Subtomogram averaging

Yu Z, Wu Y, Chen M, Huo T, Zheng W, Ludtke SJ, Shi X, Wang Z

Nat Commun (2023) 14 pp. 4025-4025 [ DOI: doi:10.1038/s41467-023-39583-2 Pubmed: 37419909 ]

EMD-29698
Download Map
3D View
In situ structure of GspD-beta on the bacterial inner membrane
Release date: Dec. 13, 2023
Resolution: 14.0 Å
EM Method: Subtomogram averaging

Yu Z, Wu Y, Chen M, Huo T, Zheng W, Ludtke SJ, Shi X, Wang Z

Nat Commun (2023) 14 pp. 4025-4025 [ DOI: doi:10.1038/s41467-023-39583-2 Pubmed: 37419909 ]

Sort by: Download
Showing 1 - 10 of 14. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [14]

Current status

  • REL [14]

Sample type

  • Complex [12]
  • Protein [5]
  • Cell [2]
  • Ligand [2]

Organism

  • Homo sapiens [7]
  • Escherichia coli [3]
  • Escherichia coli [2]
  • Escherichia coli [2]

EM Method

  • Single-particle [7]
  • Subtomogram averaging [7]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [2]
  • ≥ 5Å and < 6Å [1]
  • ≥ 8Å and < 12Å [2]
  • ≥ 12Å and < 16Å [3]
  • ≥ 16Å and < 20Å [4]

Model molecular weight

  • 100-250 kDa [4]

Release Date

  • 2025 [4]
  • 2024 [3]
  • 2023 [5]
  • 2022 [2]

Author by name

  • Wang Z [14]
  • Huo T [12]
  • Shi X [7]
  • Wu Y [7]
  • Yu Z [7]
  • Zheng W [7]
  • Chen M [5]
  • Ludtke SJ [5]
  • Wu H [5]
  • Dalton V [3]
  • Moussa Z [3]
  • Sen M [3]
  • Cao J [2]
  • Horrigan FT [2]
  • Lonard DM [2]
  • Lumahan LEV [2]
  • Lutdke SJ [2]
  • Lydon JP [2]
  • O Malley Bw [2]
  • Panigrahi AK [2]
  • Ren Q [2]
  • Sun L [2]
  • Wan Z [2]
  • Wensel TG [2]
  • Yi P [2]
  • Yu X [2]
  • Zhang W [2]

Author by ORCID

  • Wang Z [14]
  • Ludtke SJ [5]
  • Chen M [5]
  • Horrigan FT [2]
  • Yi P [2]
  • Shi X [2]
  • Sun L [2]
  • Cao J [2]
  • Wensel TG [2]

Journal

  • NAT COMMUN [7]
  • STRUCTURE [3]
  • COMMUN BIOL [2]
  • ISCIENCE [2]

Software

  • CRYOSPARC [2]
  • EMAN2 [2]
  • RELION [2]

Microscope

  • FEI TITAN KRIOS [8]
  • TFS GLACIOS [4]
  • TFS KRIOS [2]

Electron Source

  • FIELD EMISSION GUN [14]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [8]
  • FEI FALCON IV 4K X 4K [4]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]

External links

  • AlphaFold DB [5]
  • PDBe-Kb [5]
  • UniProt [5]
  • Gene Ontology [4]
  • InterPro [4]
  • PDB [4]
  • Pfam [4]
  • Complex Portal [3]
  • ChEBI [2]
  • ChEMBL [2]
  • DrugBank [2]