Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!

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grant_code:"R01-GM081871"

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Current Database

  • EMDB [11]

Current status

  • REL [11]

Sample type

  • Cell [7]
  • Complex [4]

Organism

  • Equus caballus [5]
  • Drosophila melanogaster [3]
  • Mus musculus [2]
  • Thermoplasma acidophilum [1]

EM Method

  • Single-particle [11]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [7]
  • ≥ 8Å and < 12Å [1]
  • ≥ 12Å and < 16Å [1]

Release Date

  • 2020 [7]
  • 2019 [3]
  • 2018 [1]

Author by name

  • Bepler T [11]
  • Berger B [11]
  • Noble AJ [11]
  • Kelley K [7]
  • Brasch J [4]
  • Morin A [4]
  • Shapiro L [4]
  • Rapp M [3]

Author by ORCID

  • Bepler T [11]
  • Noble AJ [10]
  • Berger B [10]

Journal

  • NAT COMMUN [7]
  • NAT METHODS [3]
  • RES COMPUT MOL BIOL [1]

Software

  • CRYOSPARC [11]
  • CTFFIND [8]

Microscope

  • FEI TITAN KRIOS [11]

Electron Source

  • FIELD EMISSION GUN [11]

Film or detector model

  • GATAN K2 QUANTUM 4K X 4K [6]
  • GATAN K2 SUMMIT 4K X 4K [5]

External links

  • EMPIAR [10]
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Showing 1 - 10 of 11. Page 1 of 2
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EMD-22052
Download Map
3D View
Raw data
EMPIAR-10473
Apoferritin short exposure 3D reconstruction with 10 total dose
Release date: Aug. 26, 2020
Resolution: 3.35 Å
EM Method: Single-particle

Bepler T, Kelley K, Noble AJ, Berger B

Nat Commun (2020) 11 pp. 5208-5208 [ DOI: doi:10.1038/s41467-020-18952-1 Pubmed: 33060581 ]

EMD-22053
Download Map
3D View
Raw data
EMPIAR-10473
Apoferritin short exposure 3D reconstruction with 25 total dose
Release date: Aug. 26, 2020
Resolution: 2.9 Å
EM Method: Single-particle

Bepler T, Kelley K, Noble AJ, Berger B

Nat Commun (2020) 11 pp. 5208-5208 [ DOI: doi:10.1038/s41467-020-18952-1 Pubmed: 33060581 ]

EMD-22056
Download Map
3D View
Raw data
EMPIAR-10473
Apoferritin short exposure 3D reconstruction with 50 total dose
Release date: Aug. 26, 2020
Resolution: 3.0 Å
EM Method: Single-particle

Bepler T, Kelley K, Noble AJ, Berger B

Nat Commun (2020) 11 pp. 5208-5208 [ DOI: doi:10.1038/s41467-020-18952-1 Pubmed: 33060581 ]

EMD-22057
Download Map
3D View
Raw data
EMPIAR-10473
Apoferritin short exposure 3D reconstruction with 75 total dose
Release date: Aug. 26, 2020
Resolution: 3.13 Å
EM Method: Single-particle

Bepler T, Kelley K, Noble AJ, Berger B

Nat Commun (2020) 11 pp. 5208-5208 [ DOI: doi:10.1038/s41467-020-18952-1 Pubmed: 33060581 ]

EMD-22058
Download Map
3D View
Raw data
EMPIAR-10473
Apoferritin short exposure 3D reconstruction with 100 total dose
Release date: Aug. 26, 2020
Resolution: 3.13 Å
EM Method: Single-particle

Bepler T, Kelley K, Noble AJ, Berger B

Nat Commun (2020) 11 pp. 5208-5208 [ DOI: doi:10.1038/s41467-020-18952-1 Pubmed: 33060581 ]

EMD-22059
Download Map
3D View
Raw data
EMPIAR-10473
Clustered protocadherin partially open conformation
Release date: Aug. 26, 2020
Resolution: 12.54 Å
EM Method: Single-particle

Bepler T, Kelley K, Noble AJ, Berger B

Nat Commun (2020) 11 pp. 5208-5208 [ DOI: doi:10.1038/s41467-020-18952-1 Pubmed: 33060581 ]

EMD-22060
Download Map
3D View
Raw data
EMPIAR-10473
Clustered protocadherin closed conformation
Release date: Aug. 26, 2020
Resolution: 11.51 Å
EM Method: Single-particle

Bepler T, Kelley K, Noble AJ, Berger B

Nat Commun (2020) 11 pp. 5208-5208 [ DOI: doi:10.1038/s41467-020-18952-1 Pubmed: 33060581 ]

EMD-20529
Download Map
3D View
Raw data
EMPIAR-10215
Toll receptor EM map from DoG picks
Release date: Sept. 11, 2019
Resolution: 3.86 Å
EM Method: Single-particle

Bepler T, Morin A, Rapp M, Brasch J, Shapiro L, Noble AJ, Berger B

Nat Methods (2019) 16 pp. 1153-1160 [ DOI: doi:10.1038/s41592-019-0575-8 Pubmed: 31591578 ]

EMD-20531
Download Map
3D View
Raw data
EMPIAR-10215
Toll receptor EM map from template picks
Release date: Sept. 11, 2019
Resolution: 3.92 Å
EM Method: Single-particle

Bepler T, Morin A, Rapp M, Brasch J, Shapiro L, Noble AJ, Berger B

Nat Methods (2019) 16 pp. 1153-1160 [ DOI: doi:10.1038/s41592-019-0575-8 Pubmed: 31591578 ]

EMD-20532
Download Map
3D View
Raw data
EMPIAR-10215
Toll receptor EM map from Topaz picks
Release date: Sept. 11, 2019
Resolution: 3.7 Å
EM Method: Single-particle

Bepler T, Morin A, Rapp M, Brasch J, Shapiro L, Noble AJ, Berger B

Nat Methods (2019) 16 pp. 1153-1160 [ DOI: doi:10.1038/s41592-019-0575-8 Pubmed: 31591578 ]

Sort by: Download
Showing 1 - 10 of 11. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [11]

Current status

  • REL [11]

Sample type

  • Cell [7]
  • Complex [4]

Organism

  • Equus caballus [5]
  • Drosophila melanogaster [3]
  • Mus musculus [2]
  • Thermoplasma acidophilum [1]

EM Method

  • Single-particle [11]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [7]
  • ≥ 8Å and < 12Å [1]
  • ≥ 12Å and < 16Å [1]

Release Date

  • 2020 [7]
  • 2019 [3]
  • 2018 [1]

Author by name

  • Bepler T [11]
  • Berger B [11]
  • Noble AJ [11]
  • Kelley K [7]
  • Brasch J [4]
  • Morin A [4]
  • Shapiro L [4]
  • Rapp M [3]

Author by ORCID

  • Bepler T [11]
  • Noble AJ [10]
  • Berger B [10]

Journal

  • NAT COMMUN [7]
  • NAT METHODS [3]
  • RES COMPUT MOL BIOL [1]

Software

  • CRYOSPARC [11]
  • CTFFIND [8]

Microscope

  • FEI TITAN KRIOS [11]

Electron Source

  • FIELD EMISSION GUN [11]

Film or detector model

  • GATAN K2 QUANTUM 4K X 4K [6]
  • GATAN K2 SUMMIT 4K X 4K [5]

External links

  • EMPIAR [10]