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grant_code:"R00AI154672"

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Current Database

  • EMDB [10]

Current status

  • REL [10]

Sample type

  • Complex [10]
  • Protein [8]
  • Ligand [7]

Organism

  • Clostridioides difficile [9]
  • Clostridioides difficile [1]

EM Method

  • Single-particle [10]

Resolution

  • ≥ 3Å and < 4Å [3]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [3]
  • ≥ 8Å and < 12Å [1]
  • ≥ 12Å and < 16Å [1]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [3]
  • 500-1000 kDa [2]

Release Date

  • 2025 [9]
  • 2024 [1]

Author by name

  • Mullard RM [10]
  • Sheedlo MJ [10]

Author by ORCID

  • Mullard RM [10]
  • Sheedlo MJ [10]

Journal

  • PLOS PATHOG [9]
  • MBIO [1]

Software

  • CRYOSPARC [10]

Microscope

  • TFS KRIOS [9]
  • FEI TITAN KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [10]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [10]

External links

  • AlphaFold DB [7]
  • ChEBI [7]
  • DrugBank [7]
  • Gene Ontology [7]
  • InterPro [7]
  • PDB [7]
  • PDBe-Kb [7]
  • UniProt [7]
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EMD-48170
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Low Resolution Cryo-EM Map of the Clostridioides difficile Transferase Component B Monomer
CryoEM
Release date: July 16, 2025
Resolution: 6.97 Å
EM Method: Single-particle

Mullard RM, Sheedlo MJ

PLoS Pathog (2025) 21 pp. e1013186-e1013186 [ Pubmed: 40690518 DOI: doi:10.1371/journal.ppat.1013186 ]

EMD-48171
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Clostridioides difficile Transferase B Component Dimer
CryoEM
Release date: July 16, 2025
Resolution: 3.56 Å
EM Method: Single-particle
Fitted PDBs: 9mdi
Q-score: 0.469
Similar entry percentile: 69%

Mullard RM, Sheedlo MJ

PLoS Pathog (2025) 21 pp. e1013186-e1013186 [ Pubmed: 40690518 DOI: doi:10.1371/journal.ppat.1013186 ]

EMD-48172
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Clostridioides difficile Transferase B Component Dimer in Complex with the A Component
CryoEM
Release date: July 16, 2025
Resolution: 5.17 Å
EM Method: Single-particle
Fitted PDBs: 9mdj
Q-score: 0.16
Similar entry percentile: 23%

Mullard RM, Sheedlo MJ

PLoS Pathog (2025) 21 pp. e1013186-e1013186 [ Pubmed: 40690518 DOI: doi:10.1371/journal.ppat.1013186 ]

EMD-48173
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Clostridioides difficile Transferase B Component Trimer
CryoEM
Release date: July 16, 2025
Resolution: 4.19 Å
EM Method: Single-particle
Fitted PDBs: 9mdl
Q-score: 0.341
Similar entry percentile: 50%

Mullard RM, Sheedlo MJ

PLoS Pathog (2025) 21 pp. e1013186-e1013186 [ Pubmed: 40690518 DOI: doi:10.1371/journal.ppat.1013186 ]

EMD-48174
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Clostridioides difficile Transferase B Component Trimer in Complex with the A Component
CryoEM
Release date: July 16, 2025
Resolution: 7.86 Å
EM Method: Single-particle
Fitted PDBs: 9mdn
Q-score: 0.099
Similar entry percentile: 30%

Mullard RM, Sheedlo MJ

PLoS Pathog (2025) 21 pp. e1013186-e1013186 [ Pubmed: 40690518 DOI: doi:10.1371/journal.ppat.1013186 ]

EMD-48175
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Clostridioides difficile Transferase B Component Tetramer
CryoEM
Release date: July 16, 2025
Resolution: 7.01 Å
EM Method: Single-particle
Fitted PDBs: 9mdp
Q-score: 0.121
Similar entry percentile: 28%

Mullard RM, Sheedlo MJ

PLoS Pathog (2025) 21 pp. e1013186-e1013186 [ Pubmed: 40690518 DOI: doi:10.1371/journal.ppat.1013186 ]

EMD-48176
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Clostridioides difficile Transferase B Component Pentamer
CryoEM
Release date: July 16, 2025
Resolution: 10.32 Å
EM Method: Single-particle

Mullard RM, Sheedlo MJ

PLoS Pathog (2025) 21 pp. e1013186-e1013186 [ Pubmed: 40690518 DOI: doi:10.1371/journal.ppat.1013186 ]

EMD-48177
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Clostridioides difficile Transferase B Component Hexamer
CryoEM
Release date: July 16, 2025
Resolution: 12.05 Å
EM Method: Single-particle

Mullard RM, Sheedlo MJ

PLoS Pathog (2025) 21 pp. e1013186-e1013186 [ Pubmed: 40690518 DOI: doi:10.1371/journal.ppat.1013186 ]

EMD-48178
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Clostridioides difficile Transferase B Component Symmetric Heptamer
CryoEM
Release date: July 16, 2025
Resolution: 3.33 Å
EM Method: Single-particle
Fitted PDBs: 9mdr
Q-score: 0.521
Similar entry percentile: 80%

Mullard RM, Sheedlo MJ

PLoS Pathog (2025) 21 pp. e1013186-e1013186 [ Pubmed: 40690518 DOI: doi:10.1371/journal.ppat.1013186 ]

EMD-44419
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Structure of Clostridioides difficile Component A 50-463 in Complex with a CDTb Oligomer
CryoEM
Release date: Nov. 27, 2024
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 9bbf
Q-score: 0.468
Similar entry percentile: 70%

Mullard RM, Sheedlo MJ

Mbio (2025) 16 pp. e0240524-e0240524 [ DOI: doi:10.1128/mbio.02405-24 Pubmed: 39611841 ]

Sort by: Download
Showing 1 - 10 of 10. Page 1 of 1
Display:
Statistics
×

Download


Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [10]

Current status

  • REL [10]

Sample type

  • Complex [10]
  • Protein [8]
  • Ligand [7]

Organism

  • Clostridioides difficile [9]
  • Clostridioides difficile [1]

EM Method

  • Single-particle [10]

Resolution

  • ≥ 3Å and < 4Å [3]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [3]
  • ≥ 8Å and < 12Å [1]
  • ≥ 12Å and < 16Å [1]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [3]
  • 500-1000 kDa [2]

Release Date

  • 2025 [9]
  • 2024 [1]

Author by name

  • Mullard RM [10]
  • Sheedlo MJ [10]

Author by ORCID

  • Mullard RM [10]
  • Sheedlo MJ [10]

Journal

  • PLOS PATHOG [9]
  • MBIO [1]

Software

  • CRYOSPARC [10]

Microscope

  • TFS KRIOS [9]
  • FEI TITAN KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [10]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [10]

External links

  • AlphaFold DB [7]
  • ChEBI [7]
  • DrugBank [7]
  • Gene Ontology [7]
  • InterPro [7]
  • PDB [7]
  • PDBe-Kb [7]
  • UniProt [7]