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grant_code:"JP21am0101091"

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Current Database

  • EMDB [2]

Current status

  • REL [2]

Sample type

  • Complex [2]
  • Protein [2]
  • RNA [2]
  • Ligand [1]

Organism

  • Aquifex aeolicus [2]
  • Aquifex aeolicus [1]
  • Hydrogenobacter thermophilus [1]
  • Hydrogenobacter thermophilus [1]

EM Method

  • Single-particle [2]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [1]

Model molecular weight

  • 250-500 kDa [2]

Release Date

  • 2024 [2]

Author by name

  • Adachi N [2]
  • Kakuta Y [2]
  • Koyasu T [2]
  • Mayanagi K [2]
  • Nakamura T [2]
  • Senda T [2]
  • Teramoto T [2]
  • Yokogawa T [2]

Author by ORCID

  • Kakuta Y [2]
  • Senda T [2]
  • Nakamura T [2]
  • Adachi N [2]
  • Teramoto T [2]

Journal

  • NAT COMMUN [2]

Software

  • RELION [2]
  • CTFFIND [1]
  • GCTF [1]

Microscope

  • FEI TITAN KRIOS [1]
  • JEOL CRYO ARM 300 [1]

Electron Source

  • FIELD EMISSION GUN [2]

Film or detector model

  • FEI FALCON IV 4K X 4K [1]
  • GATAN K3 6K X 4K [1]

External links

  • AlphaFold DB [2]
  • Gene Ontology [2]
  • InterPro [2]
  • PDB [2]
  • PDBe-Kb [2]
  • Pfam [2]
  • UniProt [2]
  • ChEBI [1]
  • DrugBank [1]
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EMD-37128
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3D View
Cryo-EM structure of Aquifex aeolicus minimal protein-only RNase P HARP in complex with pre-tRNAs
Release date: Aug. 14, 2024
Resolution: 2.87 Å
EM Method: Single-particle
Fitted PDBs: 8kd9
Q-score: 0.469

Teramoto T, Koyasu T, Yokogawa T, Adachi N, Mayanagi K, Nakamura T, Senda T, Kakuta Y

Nat Commun (2025) 16 pp. 5456-5456 [ Pubmed: 40593470 DOI: doi:10.1038/s41467-025-60002-1 ]

EMD-37129
Download Map
3D View
Cryo-EM structure of Hydrogenobacter thermophilus minimal protein-only RNase P HARP in complex with pre-tRNAs
Release date: Aug. 14, 2024
Resolution: 3.19 Å
EM Method: Single-particle
Fitted PDBs: 8kda
Q-score: 0.462

Teramoto T, Koyasu T, Yokogawa T, Adachi N, Mayanagi K, Nakamura T, Senda T, Kakuta Y

Nat Commun (2025) 16 pp. 5456-5456 [ Pubmed: 40593470 DOI: doi:10.1038/s41467-025-60002-1 ]

Sort by: Download
Showing 1 - 2 of 2. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [2]

Current status

  • REL [2]

Sample type

  • Complex [2]
  • Protein [2]
  • RNA [2]
  • Ligand [1]

Organism

  • Aquifex aeolicus [2]
  • Aquifex aeolicus [1]
  • Hydrogenobacter thermophilus [1]
  • Hydrogenobacter thermophilus [1]

EM Method

  • Single-particle [2]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [1]

Model molecular weight

  • 250-500 kDa [2]

Release Date

  • 2024 [2]

Author by name

  • Adachi N [2]
  • Kakuta Y [2]
  • Koyasu T [2]
  • Mayanagi K [2]
  • Nakamura T [2]
  • Senda T [2]
  • Teramoto T [2]
  • Yokogawa T [2]

Author by ORCID

  • Kakuta Y [2]
  • Senda T [2]
  • Nakamura T [2]
  • Adachi N [2]
  • Teramoto T [2]

Journal

  • NAT COMMUN [2]

Software

  • RELION [2]
  • CTFFIND [1]
  • GCTF [1]

Microscope

  • FEI TITAN KRIOS [1]
  • JEOL CRYO ARM 300 [1]

Electron Source

  • FIELD EMISSION GUN [2]

Film or detector model

  • FEI FALCON IV 4K X 4K [1]
  • GATAN K3 6K X 4K [1]

External links

  • AlphaFold DB [2]
  • Gene Ontology [2]
  • InterPro [2]
  • PDB [2]
  • PDBe-Kb [2]
  • Pfam [2]
  • UniProt [2]
  • ChEBI [1]
  • DrugBank [1]