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grant_code:"JP19H05637"

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Current Database

  • EMDB [5]

Current status

  • REL [5]

Sample type

  • Complex [5]
  • Ligand [4]
  • Protein [4]
  • RNA [4]

Organism

  • Triticum aestivum [5]
  • Oryza sativa [4]

EM Method

  • Single-particle [5]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [4]

Model molecular weight

  • 1-2 MDa [1]
  • 2-5 MDa [3]

Release Date

  • 2024 [5]

Author by name

  • Fujiwara T [5]
  • Ito T [5]
  • Iwasaki S [5]
  • Nishimoto M [5]
  • Saito H [5]
  • Shigematsu H [5]
  • Shirouzu M [5]
  • Sotta N [5]
  • Tanaka M [5]
  • Tsuda K [5]
  • Yokoyama T [5]

Author by ORCID

  • Sotta N [5]
  • Iwasaki S [5]
  • Yokoyama T [5]
  • Tanaka M [5]
  • Fujiwara T [5]
  • Shirouzu M [5]
  • Nishimoto M [5]
  • Ito T [5]
  • Shigematsu H [5]

Journal

  • NAT CHEM BIOL [5]

Software

  • RELION [5]

Microscope

  • JEOL CRYO ARM 300 [3]
  • FEI TECNAI ARCTICA [2]

Electron Source

  • FIELD EMISSION GUN [5]

Film or detector model

  • GATAN K3 6K X 4K [3]
  • GATAN K2 SUMMIT 4K X 4K [2]

External links

  • AlphaFold DB [4]
  • ChEBI [4]
  • ChEMBL [4]
  • DrugBank [4]
  • Gene Ontology [4]
  • InterPro [4]
  • PDB [4]
  • PDBe-Kb [4]
  • Pfam [4]
  • UniProt [4]
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EMD-35634
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3D View
Wheat 80S ribosome stalled on AUG-Stop boron dependently
Release date: Feb. 21, 2024
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8ip8
Q-score: 0.579

Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T

Nat Chem Biol (2024) 20 pp. 605-614 [ Pubmed: 38267667 DOI: doi:10.1038/s41589-023-01513-0 ]

EMD-35635
Download Map
3D View
Wheat 40S ribosome in complex with a tRNAi
Release date: Feb. 21, 2024
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8ip9
Q-score: 0.53

Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T

Nat Chem Biol (2024) 20 pp. 605-614 [ Pubmed: 38267667 DOI: doi:10.1038/s41589-023-01513-0 ]

EMD-35636
Download Map
3D View
Wheat 40S ribosome in complex with a tRNAi and eIF2
Release date: Feb. 21, 2024
Resolution: 3.7 Å
EM Method: Single-particle

Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T

Nat Chem Biol (2024) 20 pp. 605-614 [ Pubmed: 38267667 DOI: doi:10.1038/s41589-023-01513-0 ]

EMD-35637
Download Map
3D View
Wheat 80S ribosome stalled on AUG-Stop boron dependently with cycloheximide
Release date: Feb. 21, 2024
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8ipa
Q-score: 0.471

Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T

Nat Chem Biol (2024) 20 pp. 605-614 [ Pubmed: 38267667 DOI: doi:10.1038/s41589-023-01513-0 ]

EMD-35638
Download Map
3D View
Wheat 80S ribosome pausing on AUG-Stop with cycloheximide
Release date: Feb. 21, 2024
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8ipb
Q-score: 0.466

Tanaka M, Yokoyama T, Saito H, Nishimoto M, Tsuda K, Sotta N, Shigematsu H, Shirouzu M, Iwasaki S, Ito T, Fujiwara T

Nat Chem Biol (2024) 20 pp. 605-614 [ Pubmed: 38267667 DOI: doi:10.1038/s41589-023-01513-0 ]

Sort by: Download
Showing 1 - 5 of 5. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [5]

Current status

  • REL [5]

Sample type

  • Complex [5]
  • Ligand [4]
  • Protein [4]
  • RNA [4]

Organism

  • Triticum aestivum [5]
  • Oryza sativa [4]

EM Method

  • Single-particle [5]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [4]

Model molecular weight

  • 1-2 MDa [1]
  • 2-5 MDa [3]

Release Date

  • 2024 [5]

Author by name

  • Fujiwara T [5]
  • Ito T [5]
  • Iwasaki S [5]
  • Nishimoto M [5]
  • Saito H [5]
  • Shigematsu H [5]
  • Shirouzu M [5]
  • Sotta N [5]
  • Tanaka M [5]
  • Tsuda K [5]
  • Yokoyama T [5]

Author by ORCID

  • Sotta N [5]
  • Iwasaki S [5]
  • Yokoyama T [5]
  • Tanaka M [5]
  • Fujiwara T [5]
  • Shirouzu M [5]
  • Nishimoto M [5]
  • Ito T [5]
  • Shigematsu H [5]

Journal

  • NAT CHEM BIOL [5]

Software

  • RELION [5]

Microscope

  • JEOL CRYO ARM 300 [3]
  • FEI TECNAI ARCTICA [2]

Electron Source

  • FIELD EMISSION GUN [5]

Film or detector model

  • GATAN K3 6K X 4K [3]
  • GATAN K2 SUMMIT 4K X 4K [2]

External links

  • AlphaFold DB [4]
  • ChEBI [4]
  • ChEMBL [4]
  • DrugBank [4]
  • Gene Ontology [4]
  • InterPro [4]
  • PDB [4]
  • PDBe-Kb [4]
  • Pfam [4]
  • UniProt [4]