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grant_code:"GM118080"

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Current Database

  • EMDB [15]

Current status

  • REL [15]

Sample type

  • Complex [15]
  • Protein [15]
  • Ligand [6]
  • RNA [4]
  • Other [2]

Organism

  • Homo sapiens [14]
  • Synthetic construct [4]
  • Mycobacterium tuberculosis [1]

EM Method

  • Single-particle [15]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [10]
  • ≥ 4Å and < 5Å [1]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 100-250 kDa [1]
  • 250-500 kDa [3]
  • 500-1000 kDa [2]

Release Date

  • 2024 [9]
  • 2022 [4]
  • 2018 [2]

Author by name

  • Lima CD [15]
  • Dimattia MA [11]
  • Baytshtok V [9]
  • Puno MR [5]
  • Januszyk K [2]
  • Weick E-M [2]
  • Weick EM [2]
  • Zinder JC [2]
  • Arango N [1]
  • Bryk R [1]
  • Ginn J [1]
  • Kochanczyk T [1]
  • Michino M [1]
  • Nathan C [1]
  • Sun S [1]

Author by ORCID

  • Lima CD [15]
  • Puno MR [2]
  • Weick EM [2]
  • Zinder JC [2]
  • Kochanczyk T [1]

Journal

  • NAT COMMUN [9]
  • CELL [5]
  • NOT PUBLISHED [1]

Software

  • RELION [13]
  • GCTF [9]
  • CRYOSPARC [3]
  • PHENIX [1]

Microscope

  • FEI TITAN KRIOS [15]

Electron Source

  • FIELD EMISSION GUN [15]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [14]
  • GATAN K3 6K X 4K [2]

External links

  • AlphaFold DB [15]
  • PDBe-Kb [15]
  • UniProt [15]
  • Complex Portal [14]
  • ChEBI [6]
  • ChEMBL [6]
  • DrugBank [6]
  • Gene Ontology [6]
  • InterPro [6]
  • PDB [6]
  • Pfam [6]
  • CATH [2]
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Showing 1 - 10 of 15. Page 1 of 2
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EMD-44235
Download Map
3D View
Human RANBP2/RAN GTP /RANGAP1-SUMO1/UBC9/CRM1/RAN GTP - composite map and model
Release date: Oct. 16, 2024
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9b62
Q-score: 0.539

Baytshtok V, DiMattia MA, Lima CD

Nat Commun (2025) 16 pp. 6403-6403 [ Pubmed: 40640138 DOI: doi:10.1038/s41467-025-61694-1 ]

EMD-44236
Download Map
3D View
Human RANBP2/SUMO1-RANGAP1/RAN GTP /UBC9/CRM1/RAN GTP complex - overall map
Release date: Oct. 16, 2024
Resolution: 3.17 Å
EM Method: Single-particle

Baytshtok V, DiMattia MA, Lima CD

Nat Commun (2025) 16 pp. 6403-6403 [ Pubmed: 40640138 DOI: doi:10.1038/s41467-025-61694-1 ]

EMD-44237
Download Map
3D View
Focused refinement map on CRM1/RAN GTP from human RANBP2/RAN GTP /SUMO1-RANGAP1/UBC9/CRM1/RAN GTP complex
Release date: Oct. 16, 2024
Resolution: 2.89 Å
EM Method: Single-particle

Baytshtok V, DiMattia MA, Lima CD

Nat Commun (2025) 16 pp. 6403-6403 [ Pubmed: 40640138 DOI: doi:10.1038/s41467-025-61694-1 ]

EMD-44238
Download Map
3D View
Overall map for the RANBP2 RBD4/RAN GTP /RANGAP1 GAP domain from human RANBP2/RAN GTP /SUMO1-RANGAP1/UBC9/CRM1/RAN GTP complex
Release date: Oct. 16, 2024
Resolution: 3.52 Å
EM Method: Single-particle

Baytshtok V, DiMattia MA, Lima CD

Nat Commun (2025) 16 pp. 6403-6403 [ Pubmed: 40640138 DOI: doi:10.1038/s41467-025-61694-1 ]

EMD-44239
Download Map
3D View
Focused refinement map on RANBP2 RBD4/RAN GTP from human RANBP2/RAN GTP /SUMO1-RANGAP1/UBC9/CRM1/RAN GTP complex
Release date: Oct. 16, 2024
Resolution: 3.52 Å
EM Method: Single-particle

Baytshtok V, DiMattia MA, Lima CD

Nat Commun (2025) 16 pp. 6403-6403 [ Pubmed: 40640138 DOI: doi:10.1038/s41467-025-61694-1 ]

EMD-44240
Download Map
3D View
Focused refinement map on RANGAP1 GAP domain from human RANBP2/RAN GTP /SUMO1-RANGAP1/UBC9/CRM1/RAN GTP complex
Release date: Oct. 16, 2024
Resolution: 3.37 Å
EM Method: Single-particle

Baytshtok V, DiMattia MA, Lima CD

Nat Commun (2025) 16 pp. 6403-6403 [ Pubmed: 40640138 DOI: doi:10.1038/s41467-025-61694-1 ]

EMD-44241
Download Map
3D View
Overall map for human RANBP2/RAN GTP /SUMO1-RANGAP1/UBC9/CRM1/RAN GTP complex where SUMO1-RANGAP1/UBC9 was present
Release date: Oct. 16, 2024
Resolution: 3.4 Å
EM Method: Single-particle

Baytshtok V, DiMattia MA, Lima CD

Nat Commun (2025) 16 pp. 6403-6403 [ Pubmed: 40640138 DOI: doi:10.1038/s41467-025-61694-1 ]

EMD-44242
Download Map
3D View
Focused refinement map on RanGAP1 C-terminal domain-SUMO1/UBC9/RANBP2 E3 domain for human RANBP2/RAN GTP /SUMO1-RANGAP1/UBC9/CRM1/RAN GTP complex where SUMO1-RANGAP1/UBC9 was present
Release date: Oct. 16, 2024
Resolution: 3.29 Å
EM Method: Single-particle

Baytshtok V, DiMattia MA, Lima CD

Nat Commun (2025) 16 pp. 6403-6403 [ Pubmed: 40640138 DOI: doi:10.1038/s41467-025-61694-1 ]

EMD-44243
Download Map
3D View
Focused refinement map for RanGAP1 C-terminal domain-SUMO1/UBC9/RANBP2/CRM1/RAN GTP for human RANBP2/RAN GTP /SUMO1-RANGAP1/UBC9/CRM1/RAN GTP complex where SUMO1-RANGAP1/UBC9 was present
Release date: Oct. 16, 2024
Resolution: 3.1 Å
EM Method: Single-particle

Baytshtok V, DiMattia MA, Lima CD

Nat Commun (2025) 16 pp. 6403-6403 [ Pubmed: 40640138 DOI: doi:10.1038/s41467-025-61694-1 ]

EMD-24882
Download Map
3D View
Human Nuclear exosome targeting NEXT complex homodimer bound to RNA substrate 1
Release date: June 15, 2022
Resolution: 4.06 Å
EM Method: Single-particle
Fitted PDBs: 7s7b
Q-score: 0.444

Puno MR, Lima CD

Cell (2022) 185 pp. 2132-2147.e26 [ Pubmed: 35688134 DOI: doi:10.1016/j.cell.2022.04.016 ]

Sort by: Download
Showing 1 - 10 of 15. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [15]

Current status

  • REL [15]

Sample type

  • Complex [15]
  • Protein [15]
  • Ligand [6]
  • RNA [4]
  • Other [2]

Organism

  • Homo sapiens [14]
  • Synthetic construct [4]
  • Mycobacterium tuberculosis [1]

EM Method

  • Single-particle [15]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [10]
  • ≥ 4Å and < 5Å [1]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 100-250 kDa [1]
  • 250-500 kDa [3]
  • 500-1000 kDa [2]

Release Date

  • 2024 [9]
  • 2022 [4]
  • 2018 [2]

Author by name

  • Lima CD [15]
  • Dimattia MA [11]
  • Baytshtok V [9]
  • Puno MR [5]
  • Januszyk K [2]
  • Weick E-M [2]
  • Weick EM [2]
  • Zinder JC [2]
  • Arango N [1]
  • Bryk R [1]
  • Ginn J [1]
  • Kochanczyk T [1]
  • Michino M [1]
  • Nathan C [1]
  • Sun S [1]

Author by ORCID

  • Lima CD [15]
  • Puno MR [2]
  • Weick EM [2]
  • Zinder JC [2]
  • Kochanczyk T [1]

Journal

  • NAT COMMUN [9]
  • CELL [5]
  • NOT PUBLISHED [1]

Software

  • RELION [13]
  • GCTF [9]
  • CRYOSPARC [3]
  • PHENIX [1]

Microscope

  • FEI TITAN KRIOS [15]

Electron Source

  • FIELD EMISSION GUN [15]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [14]
  • GATAN K3 6K X 4K [2]

External links

  • AlphaFold DB [15]
  • PDBe-Kb [15]
  • UniProt [15]
  • Complex Portal [14]
  • ChEBI [6]
  • ChEMBL [6]
  • DrugBank [6]
  • Gene Ontology [6]
  • InterPro [6]
  • PDB [6]
  • Pfam [6]
  • CATH [2]