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grant_code:"F32GM128303"

Filter By

Current Database

  • EMDB [20]

Current status

  • REL [20]

Sample type

  • Complex [12]
  • Cell [8]
  • Protein [7]
  • Ligand [1]

Organism

  • Homo sapiens [6]
  • Equus caballus [5]
  • Drosophila melanogaster [3]
  • Mus musculus [2]
  • Escherichia coli [2]
  • Escherichia phage lambda [1]
  • Thermoplasma acidophilum [1]
  • Escherichia coli [1]
  • Saccharomyces cerevisiae [1]

EM Method

  • Single-particle [12]
  • Tomography [7]
  • Subtomogram averaging [1]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [7]
  • ≥ 4Å and < 5Å [1]
  • ≥ 8Å and < 12Å [1]
  • ≥ 12Å and < 16Å [1]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 250-500 kDa [1]

Release Date

  • 2022 [2]
  • 2020 [13]
  • 2019 [4]
  • 2018 [1]

Author by name

  • Noble AJ [20]
  • Bepler T [11]
  • Berger B [11]
  • Brasch J [10]
  • Shapiro L [10]
  • Kelley K [8]
  • Carragher B [7]
  • Potter CS [7]
  • Ahlsen G [6]
  • Dan H [6]
  • Harrison OJ [6]
  • Honig B [6]
  • Katsamba PS [6]
  • Sampogna RV [6]
  • Harrisson OJ [5]
  • Shapiro LS [5]
  • Morin A [4]
  • Rapp M [3]
  • Eng ET [2]
  • Bhabha G [1]
  • Bobe D [1]
  • Cai S [1]
  • Catalano A [1]
  • Chait B [1]
  • Chase J [1]
  • Chen JK [1]
  • Gan L [1]
  • Jaroenlak P [1]
  • Jeruzalmi D [1]
  • Klykov O [1]
  • Kopylov M [1]
  • Molloy K [1]
  • Olinares PD [1]
  • Pakotiprapha D [1]
  • Raczkowski AM [1]
  • Samuels M [1]
  • Shi J [1]
  • Tan ZY [1]
  • Des Georges A [1]

Author by ORCID

  • Noble AJ [18]
  • Bepler T [11]
  • Berger B [10]
  • Honig B [6]
  • Katsamba PS [6]
  • Eng ET [2]
  • Samuels M [1]
  • Jeruzalmi D [1]
  • Carragher B [1]
  • Chase J [1]
  • Jaroenlak P [1]
  • Olinares PD [1]
  • Pakotiprapha D [1]
  • Bobe D [1]
  • Raczkowski AM [1]
  • Des Georges A [1]
  • Klykov O [1]

Journal

  • NAT COMMUN [8]
  • CELL REP [6]
  • NAT METHODS [3]
  • ELIFE [2]
  • BIORXIV [1]
  • RES COMPUT MOL BIOL [1]

Software

  • CRYOSPARC [11]
  • CTFFIND [8]
  • TOMO3D [7]
  • RELION [2]
  • DYNAMO [1]
  • PEET [1]

Microscope

  • FEI TITAN KRIOS [20]

Electron Source

  • FIELD EMISSION GUN [20]

Film or detector model

  • GATAN K2 QUANTUM 4K X 4K [12]
  • GATAN K2 SUMMIT 4K X 4K [6]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]

External links

  • EMPIAR [18]
  • PDBe-Kb [7]
  • UniProt [7]
  • AlphaFold DB [6]
  • Complex Portal [3]
  • ChEBI [1]
  • ChEMBL [1]
  • DrugBank [1]
  • PDB [1]
Sort by: Download
Showing 1 - 10 of 20. Page 1 of 2
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Preview first 10
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EMD-31086
Download Map
3D View
Raw data
EMPIAR-10678
Subtomogram average of a yeast nucleosome from BY4741 cells
Release date: April 6, 2022
Resolution: 24.0 Å
EM Method: Subtomogram averaging

Tan ZY, Cai S, Noble AJ, Chen JK, Shi J, Gan L

eLife (2023) [ DOI: doi:10.7554/eLife.87672.1 ]

EMD-26396
Download Map
3D View
Raw data
EMPIAR-10981
CryoET of E. coli prepared with the Waffle Method
Release date: March 23, 2022
EM Method: Tomography

Kelley K, Raczkowski AM, Klykov O, Jaroenlak P, Bobe D, Kopylov M, Eng ET, Bhabha G, Potter CS, Carragher B, Noble AJ

Nat Commun (2022) 13 pp. 1857-1857 [ DOI: doi:10.1038/s41467-022-29501-3 Pubmed: 35387991 ]

EMD-22052
Download Map
3D View
Raw data
EMPIAR-10473
Apoferritin short exposure 3D reconstruction with 10 total dose
Release date: Aug. 26, 2020
Resolution: 3.35 Å
EM Method: Single-particle

Bepler T, Kelley K, Noble AJ, Berger B

Nat Commun (2020) 11 pp. 5208-5208 [ DOI: doi:10.1038/s41467-020-18952-1 Pubmed: 33060581 ]

EMD-22053
Download Map
3D View
Raw data
EMPIAR-10473
Apoferritin short exposure 3D reconstruction with 25 total dose
Release date: Aug. 26, 2020
Resolution: 2.9 Å
EM Method: Single-particle

Bepler T, Kelley K, Noble AJ, Berger B

Nat Commun (2020) 11 pp. 5208-5208 [ DOI: doi:10.1038/s41467-020-18952-1 Pubmed: 33060581 ]

EMD-22056
Download Map
3D View
Raw data
EMPIAR-10473
Apoferritin short exposure 3D reconstruction with 50 total dose
Release date: Aug. 26, 2020
Resolution: 3.0 Å
EM Method: Single-particle

Bepler T, Kelley K, Noble AJ, Berger B

Nat Commun (2020) 11 pp. 5208-5208 [ DOI: doi:10.1038/s41467-020-18952-1 Pubmed: 33060581 ]

EMD-22057
Download Map
3D View
Raw data
EMPIAR-10473
Apoferritin short exposure 3D reconstruction with 75 total dose
Release date: Aug. 26, 2020
Resolution: 3.13 Å
EM Method: Single-particle

Bepler T, Kelley K, Noble AJ, Berger B

Nat Commun (2020) 11 pp. 5208-5208 [ DOI: doi:10.1038/s41467-020-18952-1 Pubmed: 33060581 ]

EMD-22058
Download Map
3D View
Raw data
EMPIAR-10473
Apoferritin short exposure 3D reconstruction with 100 total dose
Release date: Aug. 26, 2020
Resolution: 3.13 Å
EM Method: Single-particle

Bepler T, Kelley K, Noble AJ, Berger B

Nat Commun (2020) 11 pp. 5208-5208 [ DOI: doi:10.1038/s41467-020-18952-1 Pubmed: 33060581 ]

EMD-22059
Download Map
3D View
Raw data
EMPIAR-10473
Clustered protocadherin partially open conformation
Release date: Aug. 26, 2020
Resolution: 12.54 Å
EM Method: Single-particle

Bepler T, Kelley K, Noble AJ, Berger B

Nat Commun (2020) 11 pp. 5208-5208 [ DOI: doi:10.1038/s41467-020-18952-1 Pubmed: 33060581 ]

EMD-22060
Download Map
3D View
Raw data
EMPIAR-10473
Clustered protocadherin closed conformation
Release date: Aug. 26, 2020
Resolution: 11.51 Å
EM Method: Single-particle

Bepler T, Kelley K, Noble AJ, Berger B

Nat Commun (2020) 11 pp. 5208-5208 [ DOI: doi:10.1038/s41467-020-18952-1 Pubmed: 33060581 ]

EMD-21188
Download Map
3D View
Raw data
EMPIAR-10367
human delta protocadherin 1 full ectodomains on membranes of liposomes tomogram 1
Release date: March 11, 2020
EM Method: Tomography

Harrison OJ, Brasch J, Katsamba PS, Ahlsen G, Noble AJ, Dan H, Sampogna RV, Potter CS, Carragher B, Honig B, Shapiro L

Cell Rep (2020) 30 pp. 2655-2671.e7 [ DOI: doi:10.1016/j.celrep.2020.02.003 Pubmed: 32101743 ]

Sort by: Download
Showing 1 - 10 of 20. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [20]

Current status

  • REL [20]

Sample type

  • Complex [12]
  • Cell [8]
  • Protein [7]
  • Ligand [1]

Organism

  • Homo sapiens [6]
  • Equus caballus [5]
  • Drosophila melanogaster [3]
  • Mus musculus [2]
  • Escherichia coli [2]
  • Escherichia phage lambda [1]
  • Thermoplasma acidophilum [1]
  • Escherichia coli [1]
  • Saccharomyces cerevisiae [1]

EM Method

  • Single-particle [12]
  • Tomography [7]
  • Subtomogram averaging [1]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [7]
  • ≥ 4Å and < 5Å [1]
  • ≥ 8Å and < 12Å [1]
  • ≥ 12Å and < 16Å [1]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 250-500 kDa [1]

Release Date

  • 2022 [2]
  • 2020 [13]
  • 2019 [4]
  • 2018 [1]

Author by name

  • Noble AJ [20]
  • Bepler T [11]
  • Berger B [11]
  • Brasch J [10]
  • Shapiro L [10]
  • Kelley K [8]
  • Carragher B [7]
  • Potter CS [7]
  • Ahlsen G [6]
  • Dan H [6]
  • Harrison OJ [6]
  • Honig B [6]
  • Katsamba PS [6]
  • Sampogna RV [6]
  • Harrisson OJ [5]
  • Shapiro LS [5]
  • Morin A [4]
  • Rapp M [3]
  • Eng ET [2]
  • Bhabha G [1]
  • Bobe D [1]
  • Cai S [1]
  • Catalano A [1]
  • Chait B [1]
  • Chase J [1]
  • Chen JK [1]
  • Gan L [1]
  • Jaroenlak P [1]
  • Jeruzalmi D [1]
  • Klykov O [1]
  • Kopylov M [1]
  • Molloy K [1]
  • Olinares PD [1]
  • Pakotiprapha D [1]
  • Raczkowski AM [1]
  • Samuels M [1]
  • Shi J [1]
  • Tan ZY [1]
  • Des Georges A [1]

Author by ORCID

  • Noble AJ [18]
  • Bepler T [11]
  • Berger B [10]
  • Honig B [6]
  • Katsamba PS [6]
  • Eng ET [2]
  • Samuels M [1]
  • Jeruzalmi D [1]
  • Carragher B [1]
  • Chase J [1]
  • Jaroenlak P [1]
  • Olinares PD [1]
  • Pakotiprapha D [1]
  • Bobe D [1]
  • Raczkowski AM [1]
  • Des Georges A [1]
  • Klykov O [1]

Journal

  • NAT COMMUN [8]
  • CELL REP [6]
  • NAT METHODS [3]
  • ELIFE [2]
  • BIORXIV [1]
  • RES COMPUT MOL BIOL [1]

Software

  • CRYOSPARC [11]
  • CTFFIND [8]
  • TOMO3D [7]
  • RELION [2]
  • DYNAMO [1]
  • PEET [1]

Microscope

  • FEI TITAN KRIOS [20]

Electron Source

  • FIELD EMISSION GUN [20]

Film or detector model

  • GATAN K2 QUANTUM 4K X 4K [12]
  • GATAN K2 SUMMIT 4K X 4K [6]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]

External links

  • EMPIAR [18]
  • PDBe-Kb [7]
  • UniProt [7]
  • AlphaFold DB [6]
  • Complex Portal [3]
  • ChEBI [1]
  • ChEMBL [1]
  • DrugBank [1]
  • PDB [1]