Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!

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grant_code:"DP230102073"

Filter By

Current Database

  • EMDB [8]

Current status

  • REL [8]

Sample type

  • Complex [8]
  • Protein [7]
  • Ligand [5]

Organism

  • Homo sapiens [6]
  • Ceramium secundatum [3]
  • Pyropia tenera [3]
  • Mus musculus [2]

EM Method

  • Single-particle [8]

Resolution

  • < 2Å [1]
  • ≥ 2Å and < 3Å [4]
  • ≥ 3Å and < 4Å [3]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [3]
  • 250-500 kDa [3]

Release Date

  • 2025 [6]
  • 2024 [2]

Author by name

  • Gully BS [8]
  • Gunasinghe SD [8]
  • Rashleigh L [8]
  • Rice MT [8]
  • Rossjohn J [8]
  • Venugopal H [8]
  • Almeida CF [6]
  • Gherardin NA [6]
  • Godfrey DI [6]
  • Moody DB [6]
  • Sok CL [6]
  • Van Rhijn I [6]
  • Davis SJ [2]
  • Ferreira Fernandes J [2]
  • Lay CS [2]
  • Littler DR [2]
  • Lui Y [2]
  • Santos AM [2]
  • Sharma S [2]
  • Vuong MT [2]

Author by ORCID

  • Rashleigh L [8]
  • Sok CL [6]
  • Venugopal H [2]
  • Littler DR [2]
  • Rossjohn J [2]
  • Davis SJ [2]
  • Rice MT [2]
  • Ferreira Fernandes J [2]
  • Gully BS [2]
  • Gunasinghe SD [2]

Journal

  • STRUCTURE [6]
  • NATURE [2]

Software

  • CRYOSPARC [2]
  • CTFFIND [2]

Microscope

  • TFS KRIOS [4]
  • FEI TITAN KRIOS [2]
  • FEI TALOS ARCTICA [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [8]

Film or detector model

  • GATAN K3 6K X 4K [6]
  • FEI FALCON III 4K X 4K [2]

External links

  • PDB [7]
  • AlphaFold DB [6]
  • UniProt [6]
  • ChEBI [5]
  • Pfam [3]
  • Complex Portal [2]
  • InterPro [2]
  • PDBe-Kb [2]
  • ChEMBL [1]
  • DrugBank [1]
  • Gene Ontology [1]
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Showing 1 - 8 of 8. Page 1 of 1
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EMD-48248
Download Map
3D View
scFv antibody CL33 bound to R-phycoerythrin
Release date: Aug. 6, 2025
Resolution: 2.1 Å
EM Method: Single-particle
Fitted PDBs: 9mgb
Q-score: 0.611

Rashleigh L, Venugopal H, Rice MT, Gunasinghe SD, Sok CL, Gherardin NA, Almeida CF, Van Rhijn I, Moody DB, Godfrey DI, Rossjohn J, Gully BS

Structure (2025) 33 pp. 1649- [ DOI: doi:10.1016/j.str.2025.07.006 Pubmed: 40744007 ]

EMD-48332
Download Map
3D View
4D4 TCR bound to R-phycoerythrin
Release date: Aug. 6, 2025
Resolution: 3.21 Å
EM Method: Single-particle
Fitted PDBs: 9mko
Q-score: 0.437

Rashleigh L, Venugopal H, Rice MT, Gunasinghe SD, Sok CL, Gherardin NA, Almeida CF, Van Rhijn I, Moody DB, Godfrey DI, Rossjohn J, Gully BS

Structure (2025) 33 pp. 1649- [ DOI: doi:10.1016/j.str.2025.07.006 Pubmed: 40744007 ]

EMD-70139
Download Map
3D View
Phycoerythrin bound by 1C5H TCR complex consensus map
Release date: Aug. 6, 2025
Resolution: 2.03 Å
EM Method: Single-particle

Rashleigh L, Venugopal H, Rice MT, Gunasinghe SD, Sok CL, Gherardin NA, Almeida CF, Van Rhijn I, Moody DB, Godfrey DI, Rossjohn J, Gully BS

Structure (2025) 33 pp. 1649-1662.e5 [ DOI: doi:10.1016/j.str.2025.07.006 Pubmed: 40744007 ]

EMD-70155
Download Map
3D View
Local refinement of 1C5H TCR bound to R-phycoerythrin gamma chain dimer
Release date: Aug. 6, 2025
Resolution: 2.63 Å
EM Method: Single-particle
Fitted PDBs: 9o60
Q-score: 0.489

Rashleigh L, Venugopal H, Rice MT, Gunasinghe SD, Sok CL, Gherardin NA, Almeida CF, Van Rhijn I, Moody DB, Godfrey DI, Rossjohn J, Gully BS

Structure (2025) 33 pp. 1649- [ DOI: doi:10.1016/j.str.2025.07.006 Pubmed: 40744007 ]

EMD-70156
Download Map
3D View
1C5H TCR bound to R-phycoerythrin
Release date: Aug. 6, 2025
Resolution: 1.68 Å
EM Method: Single-particle
Fitted PDBs: 9o61
Q-score: 0.732

Rashleigh L, Venugopal H, Rice MT, Gunasinghe SD, Sok CL, Gherardin NA, Almeida CF, Van Rhijn I, Moody DB, Godfrey DI, Rossjohn J, Gully BS

Structure (2025) 33 pp. 1649- [ DOI: doi:10.1016/j.str.2025.07.006 Pubmed: 40744007 ]

EMD-70157
Composite map
Download Map
3D View
1C5H TCR bound to R-phycoerythrin
Release date: Aug. 6, 2025
Resolution: 2.03 Å
EM Method: Single-particle
Fitted PDBs: 9o62
Q-score: 0.691

Rashleigh L, Venugopal H, Rice MT, Gunasinghe SD, Sok CL, Gherardin NA, Almeida CF, Van Rhijn I, Moody DB, Godfrey DI, Rossjohn J, Gully BS

Structure (2025) 33 pp. 1649- [ DOI: doi:10.1016/j.str.2025.07.006 Pubmed: 40744007 ]

EMD-45614
Download Map
3D View
T cell receptor complex
Release date: July 31, 2024
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 9ci8
Q-score: 0.387

Gully BS, Ferreira Fernandes J, Gunasinghe SD, Vuong MT, Lui Y, Rice MT, Rashleigh L, Lay CS, Littler DR, Sharma S, Santos AM, Venugopal H, Rossjohn J, Davis SJ

Nature (2024) 634 pp. 729-736 [ Pubmed: 39146975 DOI: doi:10.1038/s41586-024-07920-0 ]

EMD-45615
Download Map
3D View
T cell receptor complex
Release date: July 31, 2024
Resolution: 3.39 Å
EM Method: Single-particle
Fitted PDBs: 9cia
Q-score: 0.414

Gully BS, Ferreira Fernandes J, Gunasinghe SD, Vuong MT, Lui Y, Rice MT, Rashleigh L, Lay CS, Littler DR, Sharma S, Santos AM, Venugopal H, Rossjohn J, Davis SJ

Nature (2024) 634 pp. 729-736 [ Pubmed: 39146975 DOI: doi:10.1038/s41586-024-07920-0 ]

Sort by: Download
Showing 1 - 8 of 8. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [8]

Current status

  • REL [8]

Sample type

  • Complex [8]
  • Protein [7]
  • Ligand [5]

Organism

  • Homo sapiens [6]
  • Ceramium secundatum [3]
  • Pyropia tenera [3]
  • Mus musculus [2]

EM Method

  • Single-particle [8]

Resolution

  • < 2Å [1]
  • ≥ 2Å and < 3Å [4]
  • ≥ 3Å and < 4Å [3]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [3]
  • 250-500 kDa [3]

Release Date

  • 2025 [6]
  • 2024 [2]

Author by name

  • Gully BS [8]
  • Gunasinghe SD [8]
  • Rashleigh L [8]
  • Rice MT [8]
  • Rossjohn J [8]
  • Venugopal H [8]
  • Almeida CF [6]
  • Gherardin NA [6]
  • Godfrey DI [6]
  • Moody DB [6]
  • Sok CL [6]
  • Van Rhijn I [6]
  • Davis SJ [2]
  • Ferreira Fernandes J [2]
  • Lay CS [2]
  • Littler DR [2]
  • Lui Y [2]
  • Santos AM [2]
  • Sharma S [2]
  • Vuong MT [2]

Author by ORCID

  • Rashleigh L [8]
  • Sok CL [6]
  • Venugopal H [2]
  • Littler DR [2]
  • Rossjohn J [2]
  • Davis SJ [2]
  • Rice MT [2]
  • Ferreira Fernandes J [2]
  • Gully BS [2]
  • Gunasinghe SD [2]

Journal

  • STRUCTURE [6]
  • NATURE [2]

Software

  • CRYOSPARC [2]
  • CTFFIND [2]

Microscope

  • TFS KRIOS [4]
  • FEI TITAN KRIOS [2]
  • FEI TALOS ARCTICA [1]
  • TFS TALOS [1]

Electron Source

  • FIELD EMISSION GUN [8]

Film or detector model

  • GATAN K3 6K X 4K [6]
  • FEI FALCON III 4K X 4K [2]

External links

  • PDB [7]
  • AlphaFold DB [6]
  • UniProt [6]
  • ChEBI [5]
  • Pfam [3]
  • Complex Portal [2]
  • InterPro [2]
  • PDBe-Kb [2]
  • ChEMBL [1]
  • DrugBank [1]
  • Gene Ontology [1]