Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!

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grant_code:"ALTF 33-2021"

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Current Database

  • EMDB [38]

Current status

  • REL [38]

Sample type

  • Complex [35]
  • Cell [3]

Organism

  • Dictyostelium discoideum [33]
  • Arabidopsis thaliana [5]

EM Method

  • Subtomogram averaging [35]
  • Tomography [3]

Resolution

  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]
  • ≥ 20Å and < 30Å [5]
  • ≥ 30Å [28]

Model molecular weight

  • > 10 MDa [1]

Release Date

  • 2025 [5]
  • 2024 [33]

Author by name

  • Beck M [38]
  • Hoffmann PC [38]
  • Obarska-kosinska A [38]
  • Andino-frydman E [33]
  • Cernikova L [33]
  • Cruz-leon S [33]
  • Hummer G [33]
  • Kim H [33]
  • Kosinski J [33]
  • Kreysing JP [33]
  • Margiotta E [33]
  • Turonova B [33]
  • Fourcassie V [5]
  • Germain H [5]
  • Sanchez Carrillo Ib [5]
  • Kreysing J [1]

Author by ORCID

  • Hoffmann PC [38]
  • Obarska-kosinska A [33]
  • Hummer G [33]
  • Kosinski J [33]
  • Kreysing JP [33]
  • Andino-frydman E [33]
  • Germain H [5]
  • Beck M [5]
  • Sanchez Carrillo Ib [5]
  • Fourcassie V [5]

Journal

  • MOL CELL [33]
  • NAT PLANTS [5]

Software

  • NOVASTA [5]

Microscope

  • FEI TITAN KRIOS [28]
  • TFS KRIOS [10]

Electron Source

  • FIELD EMISSION GUN [38]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [38]

External links

  • EMPIAR [2]
  • PDB [1]
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EMD-54657
Composite map
Download Map
3D View
Composite map of the A. thaliana nuclera pore complex
Release date: Nov. 12, 2025
Resolution: 33.0 Å
EM Method: Subtomogram averaging
Fitted PDBs: 9sob

Sanchez Carrillo IB, Hoffmann PC, Obarska-Kosinska A, Fourcassie V, Beck M, Germain H

Nat Plants (2025) 11 pp. 2368-2380 [ Pubmed: 41174229 DOI: doi:10.1038/s41477-025-02138-y ]

EMD-54653
Download Map
3D View
Asymmetric subunit of the A. thaliana nuclear pore complex
Release date: Nov. 5, 2025
Resolution: 39.0 Å
EM Method: Subtomogram averaging

Sanchez Carrillo IB, Hoffmann PC, Obarska-Kosinska A, Fourcassie V, Beck M, Germain H

Nat Plants (2025) 11 pp. 2368-2380 [ Pubmed: 41174229 DOI: doi:10.1038/s41477-025-02138-y ]

EMD-54654
Download Map
3D View
Inner ring segment of the A. thaliana nuclear pore complex
Release date: Nov. 5, 2025
Resolution: 33.0 Å
EM Method: Subtomogram averaging

Sanchez Carrillo IB, Hoffmann PC, Obarska-Kosinska A, Fourcassie V, Beck M, Germain H

Nat Plants (2025) 11 pp. 2368-2380 [ Pubmed: 41174229 DOI: doi:10.1038/s41477-025-02138-y ]

EMD-54655
Download Map
3D View
Cytoplasmic ring segment of the A. thaliana nuclear pore complex
Release date: Nov. 5, 2025
Resolution: 33.0 Å
EM Method: Subtomogram averaging

Sanchez Carrillo IB, Hoffmann PC, Obarska-Kosinska A, Fourcassie V, Beck M, Germain H

Nat Plants (2025) 11 pp. 2368-2380 [ Pubmed: 41174229 DOI: doi:10.1038/s41477-025-02138-y ]

EMD-54656
Download Map
3D View
Nuclear ring segment of the A. thaliana nuclear pore complex
Release date: Nov. 5, 2025
Resolution: 36.0 Å
EM Method: Subtomogram averaging

Sanchez Carrillo IB, Hoffmann PC, Obarska-Kosinska A, Fourcassie V, Beck M, Germain H

Nat Plants (2025) 11 pp. 2368-2380 [ Pubmed: 41174229 DOI: doi:10.1038/s41477-025-02138-y ]

EMD-19137
Composite map
Download Map
3D View
Raw data
EMPIAR-11845
Composite structure of the Dictyostelium discoideum nuclear pore complex in cells
Release date: Dec. 25, 2024
Resolution: 30.0 Å
EM Method: Subtomogram averaging

Hoffmann PC, Kim H, Obarska-Kosinska A, Kreysing JP, Andino-Frydman E, Cruz-Leon S, Margiotta E, Cernikova L, Kosinski J, Turonova B, Hummer G, Beck M

Mol Cell (2025) 85 pp. 537-554.e11 [ DOI: doi:10.1016/j.molcel.2024.11.038 Pubmed: 39729993 ]

EMD-19139
Download Map
3D View
Asymmetric subunit of the Dictyostelium discoideum nuclear pore complex
Release date: Dec. 25, 2024
Resolution: 36.0 Å
EM Method: Subtomogram averaging

Hoffmann PC, Kim H, Obarska-Kosinska A, Kreysing JP, Andino-Frydman E, Cruz-Leon S, Margiotta E, Cernikova L, Kosinski J, Turonova B, Hummer G, Beck M

Mol Cell (2025) 85 pp. 537-554.e11 [ DOI: doi:10.1016/j.molcel.2024.11.038 Pubmed: 39729993 ]

EMD-19140
Download Map
3D View
Inner ring segment of the Dictyostelium discoideum nuclear pore complex
Release date: Dec. 25, 2024
Resolution: 25.0 Å
EM Method: Subtomogram averaging

Hoffmann PC, Kim H, Obarska-Kosinska A, Kreysing JP, Andino-Frydman E, Cruz-Leon S, Margiotta E, Cernikova L, Kosinski J, Turonova B, Hummer G, Beck M

Mol Cell (2025) 85 pp. 537-554.e11 [ DOI: doi:10.1016/j.molcel.2024.11.038 Pubmed: 39729993 ]

EMD-19141
Download Map
3D View
Cytoplasmic ring segment of the Dictyostelium discoideum nuclear pore complex
Release date: Dec. 25, 2024
Resolution: 26.0 Å
EM Method: Subtomogram averaging

Hoffmann PC, Kim H, Obarska-Kosinska A, Kreysing JP, Andino-Frydman E, Cruz-Leon S, Margiotta E, Cernikova L, Kosinski J, Turonova B, Hummer G, Beck M

Mol Cell (2025) 85 pp. 537-554.e11 [ DOI: doi:10.1016/j.molcel.2024.11.038 Pubmed: 39729993 ]

EMD-19142
Download Map
3D View
Nuclear ring segment of the Dictyostelium discoideum nuclear pore complex
Release date: Dec. 25, 2024
Resolution: 23.0 Å
EM Method: Subtomogram averaging

Hoffmann PC, Kim H, Obarska-Kosinska A, Kreysing JP, Andino-Frydman E, Cruz-Leon S, Margiotta E, Cernikova L, Kosinski J, Turonova B, Hummer G, Beck M

Mol Cell (2025) 85 pp. 537-554.e11 [ DOI: doi:10.1016/j.molcel.2024.11.038 Pubmed: 39729993 ]

Sort by: Download
Showing 1 - 10 of 38. Page 1 of 4
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [38]

Current status

  • REL [38]

Sample type

  • Complex [35]
  • Cell [3]

Organism

  • Dictyostelium discoideum [33]
  • Arabidopsis thaliana [5]

EM Method

  • Subtomogram averaging [35]
  • Tomography [3]

Resolution

  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]
  • ≥ 20Å and < 30Å [5]
  • ≥ 30Å [28]

Model molecular weight

  • > 10 MDa [1]

Release Date

  • 2025 [5]
  • 2024 [33]

Author by name

  • Beck M [38]
  • Hoffmann PC [38]
  • Obarska-kosinska A [38]
  • Andino-frydman E [33]
  • Cernikova L [33]
  • Cruz-leon S [33]
  • Hummer G [33]
  • Kim H [33]
  • Kosinski J [33]
  • Kreysing JP [33]
  • Margiotta E [33]
  • Turonova B [33]
  • Fourcassie V [5]
  • Germain H [5]
  • Sanchez Carrillo Ib [5]
  • Kreysing J [1]

Author by ORCID

  • Hoffmann PC [38]
  • Obarska-kosinska A [33]
  • Hummer G [33]
  • Kosinski J [33]
  • Kreysing JP [33]
  • Andino-frydman E [33]
  • Germain H [5]
  • Beck M [5]
  • Sanchez Carrillo Ib [5]
  • Fourcassie V [5]

Journal

  • MOL CELL [33]
  • NAT PLANTS [5]

Software

  • NOVASTA [5]

Microscope

  • FEI TITAN KRIOS [28]
  • TFS KRIOS [10]

Electron Source

  • FIELD EMISSION GUN [38]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [38]

External links

  • EMPIAR [2]
  • PDB [1]