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grant_code:"AI168178"

Filter By

Current Database

  • EMDB [9]

Current status

  • REL [9]

Sample type

  • Complex [9]
  • Protein [6]
  • Ligand [5]

Organism

  • Severe acute respiratory syndrome coronavirus [8]
  • Homo sapiens [7]

EM Method

  • Single-particle [9]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [5]
  • ≥ 4Å and < 5Å [1]

Model molecular weight

  • 0-50 kDa [2]
  • 100-250 kDa [4]

Release Date

  • 2025 [4]
  • 2024 [3]
  • 2023 [2]

Author by name

  • Bajic G [9]
  • Adelsberg DC [5]
  • Andreata-santos R [5]
  • Clark JJ [5]
  • Krammer F [5]
  • Simon V [5]
  • Singh G [5]
  • Sun W [5]
  • Yong JS [5]
  • Sapse IA [4]
  • Amanat F [3]
  • Bournazos S [3]
  • Carreno JM [3]
  • Edgar JE [3]
  • Ellebedy AH [3]
  • Gonzalez-dominguez I [3]
  • Hoxie I [3]
  • Jaiswal D [3]
  • Raskin A [3]
  • Tcheou J [3]
  • Allen R [2]
  • Atanasoff KE [2]
  • Bozarth B [2]
  • Brambilla L [2]
  • Bushfield K [2]
  • Civljak A [2]
  • Coelho CH [2]
  • Cohn H [2]
  • Duty JA [2]
  • Fantin RF [2]
  • Fu Y [2]
  • Kleinstein SH [2]
  • Kowdle S [2]
  • Lee B [2]
  • Lee ES [2]
  • Lim R [2]
  • Lobo I [2]
  • Nardulli JR [2]
  • Rao V [2]
  • Slamanig S [2]
  • Srivastava K [2]
  • Stevens CS [2]
  • Tortorella D [2]
  • Tran L [2]
  • Hung C-T [1]
  • Hung CT [1]

Author by ORCID

  • Bajic G [4]
  • Jaiswal D [3]
  • Atanasoff KE [2]
  • Sun W [2]
  • Fantin RF [2]
  • Lee B [2]
  • Tortorella D [2]
  • Stevens CS [2]
  • Nardulli JR [2]
  • Sapse IA [1]

Journal

  • BIORXIV [3]
  • CELL REP [3]
  • LANCET MICROBE [2]
  • MBIO [2]
  • TO BE PUBLISHED [2]

Software

  • CRYOSPARC [1]

Microscope

  • FEI TITAN KRIOS [5]
  • TFS KRIOS [4]

Electron Source

  • FIELD EMISSION GUN [9]

Film or detector model

  • GATAN K3 6K X 4K [8]
  • FEI FALCON IV 4K X 4K [1]

External links

  • AlphaFold DB [6]
  • PDB [6]
  • PDBe-Kb [6]
  • UniProt [6]
  • ChEBI [5]
  • ChEMBL [5]
  • Pfam [5]
  • Complex Portal [4]
  • InterPro [4]
  • Gene Ontology [3]
  • EMPIAR [2]
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EMD-47426
Download Map
3D View
CryoEM structure of a broadly neutralizing anti-SARS-CoV-2 antibody 52
Release date: July 30, 2025
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9e21
Q-score: 0.534

Jaiswal D, Bajic G

To Be Published

EMD-48507
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3D View
SARS-CoV2 Spike S2 Subunit in complex with M15 Antibody Fragment
Release date: July 9, 2025
Resolution: 3.37 Å
EM Method: Single-particle
Fitted PDBs: 9mpw
Q-score: 0.456

Sapse IA, Bajic G

To Be Published

EMD-45443
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3D View
Dissecting human monoclonal antibody responses from mRNA and protein-based booster vaccinations against XBB1.5 SARS-CoV-2
Release date: March 12, 2025
Resolution: 2.65 Å
EM Method: Single-particle
Fitted PDBs: 9cci
Q-score: 0.553

Fantin RF, Clark JJ, Cohn H, Jaiswal D, Bozarth B, Rao V, Civljak A, Lobo I, Nardulli JR, Srivastava K, Yong JS, Andreata-Santos R, Bushfield K, Lee ES, Singh G, Kleinstein SH, Krammer F, Simon V, Bajic G, Coelho CH

Lancet Microbe (2025) 6 pp. 101103-101103 [ Pubmed: 40456237 DOI: doi:10.1016/j.lanmic.2025.101103 ]

EMD-45444
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3D View
Dissecting human monoclonal antibody responses from mRNA and protein-based booster vaccinations against XBB1.5 SARS-CoV-2
Release date: March 12, 2025
Resolution: 2.37 Å
EM Method: Single-particle
Fitted PDBs: 9ccj
Q-score: 0.623

Fantin RF, Clark JJ, Cohn H, Jaiswal D, Bozarth B, Rao V, Civljak A, Lobo I, Nardulli JR, Srivastava K, Yong JS, Andreata-Santos R, Bushfield K, Lee ES, Singh G, Kleinstein SH, Krammer F, Simon V, Bajic G, Coelho CH

Lancet Microbe (2025) 6 pp. 101103-101103 [ Pubmed: 40456237 DOI: doi:10.1016/j.lanmic.2025.101103 ]

EMD-43306
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cryo-EM structure of a non-neutralizing antibody V3-21 in complex with SARS-CoV-2 spike
Release date: Nov. 27, 2024
Resolution: 4.31 Å
EM Method: Single-particle

Clark JJ, Hoxie I, Adelsberg DC, Sapse IA, Andreata-Santos R, Yong JS, Amanat F, Tcheou J, Raskin A, Singh G, Gonzalez-Dominguez I, Edgar JE, Bournazos S, Sun W, Carreno JM, Simon V, Ellebedy AH, Bajic G, Krammer F

Cell Rep (2024) 43 pp. 114922-114922 [ Pubmed: 39504245 DOI: doi:10.1016/j.celrep.2024.114922 ]

EMD-43314
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cryo-EM structure of a non-neutralizing antibody V6-12 in complex with SARS-CoV-2 spike
Release date: Nov. 27, 2024
Resolution: 3.42 Å
EM Method: Single-particle

Clark JJ, Hoxie I, Adelsberg DC, Sapse IA, Andreata-Santos R, Yong JS, Amanat F, Tcheou J, Raskin A, Singh G, Gonzalez-Dominguez I, Edgar JE, Bournazos S, Sun W, Carreno JM, Simon V, Ellebedy AH, Bajic G, Krammer F

Cell Rep (2024) 43 pp. 114922-114922 [ Pubmed: 39504245 DOI: doi:10.1016/j.celrep.2024.114922 ]

EMD-43255
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3D View
Raw data
EMPIAR-11847
Protective effect of human non-neutralizing cross-reactive spike antibodies elicited by SARS-CoV-2 mRNA vaccination
Release date: Oct. 23, 2024
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8via
Q-score: 0.302

Clark JJ, Hoxie I, Adelsberg DC, Sapse IA, Andreata-Santos R, Yong JS, Amanat F, Tcheou J, Raskin A, Singh G, Gonzalez-Dominguez I, Edgar JE, Bournazos S, Sun W, Carreno JM, Simon V, Ellebedy AH, Bajic G, Krammer F

Cell Rep (2024) 43 pp. 114922-114922 [ Pubmed: 39504245 DOI: doi:10.1016/j.celrep.2024.114922 ]

EMD-29227
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cryoEM structure of a broadly neutralizing antibody STI-9167
Release date: Dec. 20, 2023
Resolution: 2.53 Å
EM Method: Single-particle

Atanasoff KE, Brambilla L, Adelsberg DC, Kowdle S, Stevens CS, Slamanig S, Hung C-T, Fu Y, Lim R, Tran L, Allen R, Sun W, Duty JA, Bajic G, Lee B, Tortorella D

Mbio (2024) 15 pp. e0247723-e0247723 [ DOI: doi:10.1128/mbio.02477-23 Pubmed: 38054729 ]

EMD-28537
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3D View
Raw data
EMPIAR-11341
cryoEM structure of a broadly neutralizing anti-SARS-CoV-2 antibody STI-9167
Release date: Oct. 11, 2023
Resolution: 3.16 Å
EM Method: Single-particle
Fitted PDBs: 8eqf
Q-score: 0.518

Atanasoff KE, Brambilla L, Adelsberg DC, Kowdle S, Stevens CS, Slamanig S, Hung CT, Fu Y, Lim R, Tran L, Allen R, Sun W, Duty JA, Bajic G, Lee B, Tortorella D

Mbio (2024) 15 pp. e0247723-e0247723 [ DOI: doi:10.1128/mbio.02477-23 Pubmed: 38054729 ]

Sort by: Download
Showing 1 - 9 of 9. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [9]

Current status

  • REL [9]

Sample type

  • Complex [9]
  • Protein [6]
  • Ligand [5]

Organism

  • Severe acute respiratory syndrome coronavirus [8]
  • Homo sapiens [7]

EM Method

  • Single-particle [9]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [5]
  • ≥ 4Å and < 5Å [1]

Model molecular weight

  • 0-50 kDa [2]
  • 100-250 kDa [4]

Release Date

  • 2025 [4]
  • 2024 [3]
  • 2023 [2]

Author by name

  • Bajic G [9]
  • Adelsberg DC [5]
  • Andreata-santos R [5]
  • Clark JJ [5]
  • Krammer F [5]
  • Simon V [5]
  • Singh G [5]
  • Sun W [5]
  • Yong JS [5]
  • Sapse IA [4]
  • Amanat F [3]
  • Bournazos S [3]
  • Carreno JM [3]
  • Edgar JE [3]
  • Ellebedy AH [3]
  • Gonzalez-dominguez I [3]
  • Hoxie I [3]
  • Jaiswal D [3]
  • Raskin A [3]
  • Tcheou J [3]
  • Allen R [2]
  • Atanasoff KE [2]
  • Bozarth B [2]
  • Brambilla L [2]
  • Bushfield K [2]
  • Civljak A [2]
  • Coelho CH [2]
  • Cohn H [2]
  • Duty JA [2]
  • Fantin RF [2]
  • Fu Y [2]
  • Kleinstein SH [2]
  • Kowdle S [2]
  • Lee B [2]
  • Lee ES [2]
  • Lim R [2]
  • Lobo I [2]
  • Nardulli JR [2]
  • Rao V [2]
  • Slamanig S [2]
  • Srivastava K [2]
  • Stevens CS [2]
  • Tortorella D [2]
  • Tran L [2]
  • Hung C-T [1]
  • Hung CT [1]

Author by ORCID

  • Bajic G [4]
  • Jaiswal D [3]
  • Atanasoff KE [2]
  • Sun W [2]
  • Fantin RF [2]
  • Lee B [2]
  • Tortorella D [2]
  • Stevens CS [2]
  • Nardulli JR [2]
  • Sapse IA [1]

Journal

  • BIORXIV [3]
  • CELL REP [3]
  • LANCET MICROBE [2]
  • MBIO [2]
  • TO BE PUBLISHED [2]

Software

  • CRYOSPARC [1]

Microscope

  • FEI TITAN KRIOS [5]
  • TFS KRIOS [4]

Electron Source

  • FIELD EMISSION GUN [9]

Film or detector model

  • GATAN K3 6K X 4K [8]
  • FEI FALCON IV 4K X 4K [1]

External links

  • AlphaFold DB [6]
  • PDB [6]
  • PDBe-Kb [6]
  • UniProt [6]
  • ChEBI [5]
  • ChEMBL [5]
  • Pfam [5]
  • Complex Portal [4]
  • InterPro [4]
  • Gene Ontology [3]
  • EMPIAR [2]