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grant_code:"5U54AI150472-09"

Filter By

Current Database

  • EMDB [18]

Current status

  • REL [18]

Sample type

  • Complex [18]
  • Protein [15]
  • Other [1]

Organism

  • Human immunodeficiency virus 1 [17]
  • Homo sapiens [4]
  • Escherichia coli [1]

EM Method

  • Single-particle [16]
  • Subtomogram averaging [2]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [13]
  • ≥ 6Å and < 8Å [2]

Model molecular weight

  • 100-250 kDa [6]
  • 250-500 kDa [4]
  • 500-1000 kDa [5]

Release Date

  • 2023 [18]

Author by name

  • Briggs JAG [18]
  • Dick RA [18]
  • Tan A [18]
  • James LC [10]
  • Lu JM [10]
  • Stacey JCV [10]
  • Highland CM [8]
  • Ricana CL [8]

Author by ORCID

  • Tan A [18]
  • Dick RA [18]
  • Briggs JAG [18]
  • Lu JM [10]
  • James LC [10]
  • Ricana CL [8]
  • Highland CM [8]

Journal

  • PNAS [18]

Software

  • CRYOSPARC [10]
  • MATLAB [2]
  • SUBTOM [2]
  • RELION [1]

Microscope

  • FEI TITAN KRIOS [12]
  • FEI TALOS ARCTICA [6]

Electron Source

  • FIELD EMISSION GUN [18]

Film or detector model

  • FEI FALCON IV 4K X 4K [10]
  • GATAN K3 BIOQUANTUM 6K X 4K [6]
  • GATAN K2 SUMMIT 4K X 4K [2]

External links

  • PDB [15]
  • PDBe-Kb [15]
  • UniProt [15]
  • EMPIAR [6]
  • AlphaFold DB [4]
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Showing 1 - 10 of 18. Page 1 of 2
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EMD-16698
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3D View
Subtomogram average of HIV-1 CA pentamer from capsid-like particles assembled with inositol hexakisphosphate
Release date: May 3, 2023
Resolution: 6.2 Å
EM Method: Subtomogram averaging

Highland CM, Tan A, Ricana CL, Briggs JAG, Dick RA

PNAS (2023) 120 pp. e2220545120-e2220545120 [ DOI: doi:10.1073/pnas.2220545120 Pubmed: 37094124 ]

EMD-16699
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3D View
Subtomogram average of HIV-1 CA hexamer from capsid-like particles assembled with inositol hexakisphosphate
Release date: May 3, 2023
Resolution: 3.9 Å
EM Method: Subtomogram averaging

Highland CM, Tan A, Ricana CL, Briggs JAG, Dick RA

PNAS (2023) 120 pp. e2220545120-e2220545120 [ DOI: doi:10.1073/pnas.2220545120 Pubmed: 37094124 ]

EMD-29772
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3D View
Raw data
EMPIAR-11570
HIV-1 CA lattice bound to IP6; from capsid-like particles
Release date: May 3, 2023
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8g6k
Q-score: 0.41

Highland CM, Tan A, Ricana CL, Briggs JAG, Dick RA

PNAS (2023) 120 pp. e2220545120-e2220545120 [ DOI: doi:10.1073/pnas.2220545120 Pubmed: 37094124 ]

EMD-29773
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3D View
Raw data
EMPIAR-11571
HIV-1 capsid lattice bound to IP6, pH 6.2
Release date: May 3, 2023
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8g6l
Q-score: 0.464

Highland CM, Tan A, Ricana CL, Briggs JAG, Dick RA

PNAS (2023) 120 pp. e2220545120-e2220545120 [ DOI: doi:10.1073/pnas.2220545120 Pubmed: 37094124 ]

EMD-29774
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3D View
Raw data
EMPIAR-11572
HIV-1 CA lattice bound to IP6, pH 7.4
Release date: May 3, 2023
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8g6m
Q-score: 0.474

Highland CM, Tan A, Ricana CL, Briggs JAG, Dick RA

PNAS (2023) 120 pp. e2220545120-e2220545120 [ DOI: doi:10.1073/pnas.2220545120 Pubmed: 37094124 ]

EMD-29775
Download Map
3D View
Raw data
EMPIAR-11573
HIV-1 capsid lattice bound to dNTPs
Release date: May 3, 2023
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8g6n
Q-score: 0.414

Highland CM, Tan A, Ricana CL, Briggs JAG, Dick RA

PNAS (2023) 120 pp. e2220545120-e2220545120 [ DOI: doi:10.1073/pnas.2220545120 Pubmed: 37094124 ]

EMD-29776
Download Map
3D View
Raw data
EMPIAR-11574
HIV-1 capsid lattice bound to IP6 and Lenacapavir
Release date: May 3, 2023
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8g6o
Q-score: 0.523

Highland CM, Tan A, Ricana CL, Briggs JAG, Dick RA

PNAS (2023) 120 pp. e2220545120-e2220545120 [ DOI: doi:10.1073/pnas.2220545120 Pubmed: 37094124 ]

EMD-29777
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3D View
Raw data
EMPIAR-11575
Defective HIV-1 CA pentamer in surrounding hexameric lattice
Release date: May 3, 2023
Resolution: 7.1 Å
EM Method: Single-particle

Highland CM, Tan A, Ricana CL, Briggs JAG, Dick RA

PNAS (2023) 120 pp. e2220545120-e2220545120 [ DOI: doi:10.1073/pnas.2220545120 Pubmed: 37094124 ]

EMD-16703
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3D View
HIV-1 mature capsid hexamer from CA-IP6 CLPs
Release date: April 26, 2023
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 8ckv
Q-score: 0.547

Stacey JCV, Tan A, Lu JM, James LC, Dick RA, Briggs JAG

PNAS (2023) 120 pp. e2220557120-e2220557120 [ Pubmed: 37040417 DOI: doi:10.1073/pnas.2220557120 ]

EMD-16704
Download Map
3D View
HIV-1 mature capsid pentamer from CA-IP6 CLPs
Release date: April 26, 2023
Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 8ckw
Q-score: 0.515

Stacey JCV, Tan A, Lu JM, James LC, Dick RA, Briggs JAG

PNAS (2023) 120 pp. e2220557120-e2220557120 [ Pubmed: 37040417 DOI: doi:10.1073/pnas.2220557120 ]

Sort by: Download
Showing 1 - 10 of 18. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [18]

Current status

  • REL [18]

Sample type

  • Complex [18]
  • Protein [15]
  • Other [1]

Organism

  • Human immunodeficiency virus 1 [17]
  • Homo sapiens [4]
  • Escherichia coli [1]

EM Method

  • Single-particle [16]
  • Subtomogram averaging [2]

Resolution

  • ≥ 2Å and < 3Å [3]
  • ≥ 3Å and < 4Å [13]
  • ≥ 6Å and < 8Å [2]

Model molecular weight

  • 100-250 kDa [6]
  • 250-500 kDa [4]
  • 500-1000 kDa [5]

Release Date

  • 2023 [18]

Author by name

  • Briggs JAG [18]
  • Dick RA [18]
  • Tan A [18]
  • James LC [10]
  • Lu JM [10]
  • Stacey JCV [10]
  • Highland CM [8]
  • Ricana CL [8]

Author by ORCID

  • Tan A [18]
  • Dick RA [18]
  • Briggs JAG [18]
  • Lu JM [10]
  • James LC [10]
  • Ricana CL [8]
  • Highland CM [8]

Journal

  • PNAS [18]

Software

  • CRYOSPARC [10]
  • MATLAB [2]
  • SUBTOM [2]
  • RELION [1]

Microscope

  • FEI TITAN KRIOS [12]
  • FEI TALOS ARCTICA [6]

Electron Source

  • FIELD EMISSION GUN [18]

Film or detector model

  • FEI FALCON IV 4K X 4K [10]
  • GATAN K3 BIOQUANTUM 6K X 4K [6]
  • GATAN K2 SUMMIT 4K X 4K [2]

External links

  • PDB [15]
  • PDBe-Kb [15]
  • UniProt [15]
  • EMPIAR [6]
  • AlphaFold DB [4]