Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!

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Filter By

Current Database

  • EMDB [94]

Current status

  • REL [94]

Sample type

  • Complex [90]
  • Protein [61]
  • Ligand [54]
  • Cell [4]

Organism

  • Homo sapiens [76]
  • Severe acute respiratory syndrome coronavirus [26]
  • Human coronavirus hku1 [9]
  • Severe acute respiratory syndrome coronavirus [2]

EM Method

  • Single-particle [94]

Resolution

  • ≥ 2Å and < 3Å [45]
  • ≥ 3Å and < 4Å [35]
  • ≥ 4Å and < 5Å [8]
  • ≥ 6Å and < 8Å [3]
  • ≥ 8Å and < 12Å [3]

Model molecular weight

  • 100-250 kDa [20]
  • 250-500 kDa [22]
  • 500-1000 kDa [14]
  • 1-2 MDa [1]

Release Date

  • 2025 [3]
  • 2024 [15]
  • 2023 [3]
  • 2022 [12]
  • 2021 [31]
  • 2020 [30]

Author by name

  • Zhou Q [94]
  • Zhang YY [73]
  • Zhang Y [69]
  • Li Y [57]
  • Yan RH [57]
  • Yan R [56]
  • Xia L [48]
  • Guo Y [39]
  • Chi X [30]
  • Zhong X [28]
  • Li YN [27]
  • Ye F [23]
  • Chi XM [19]
  • Chen Y [18]
  • Guo YY [13]
  • Huang J [13]
  • Li XR [13]
  • Xia LY [13]
  • Shi Y [12]
  • Lei J [9]
  • Su Q [9]
  • Zhang J [9]
  • Altmann KH [8]
  • Gertsch J [8]
  • Muller J [8]
  • Singer S [8]
  • Wang Y [8]
  • Zhang L [8]
  • Zhang Z [8]
  • Zhao J [8]
  • Zhou J [8]
  • Chen J [6]
  • Cheng L [6]
  • Li X [6]
  • Zhang S [6]
  • Wang X [5]
  • Xu W [5]
  • Cai R [4]
  • Chen C [4]
  • Chen L [4]
  • Cheng J [4]
  • Dai J [4]
  • Feng J [4]
  • Huang B [4]
  • Huang BD [4]
  • Jiang S [4]
  • Jin Y [4]
  • Lei JL [4]
  • Li J [4]
  • Li S [4]
  • Liu X [4]
  • Qu B [4]
  • Rao H [4]
  • Shen Y [4]
  • Su J [4]
  • Wang Q [4]
  • Wei P [4]
  • Xiao J [4]
  • Xie Y [4]
  • Xiong X [4]
  • Xu Y [4]
  • Yan Q [4]
  • Zhang B [4]
  • Zhong XY [4]
  • Zhu A [4]
  • Zhuo J [4]
  • Fan P [3]
  • Wang Z [3]
  • Wu L [3]
  • Wu LS [3]
  • Ye FF [3]
  • Yu C [3]
  • Zhang G [3]
  • Bi W [2]
  • Bi WW [2]
  • Bian Y [2]
  • Cai X [2]
  • Chang Y [2]
  • Chen G [2]
  • Chen H [2]
  • Chen P [2]
  • Chen W [2]
  • Chen YL [2]
  • Chen Z [2]
  • Chu W [2]
  • Dang B [2]
  • Dong Y [2]
  • Drelich A [2]
  • Fu L [2]
  • Ge X [2]
  • Gilly J [2]
  • Guo L [2]
  • Han L [2]
  • Hao M [2]
  • He Y [2]
  • Hou L [2]
  • Huang H [2]
  • Ji T [2]
  • Jiang H [2]
  • Ju B [2]

Author by ORCID

  • Li Y [44]
  • Zhou Q [40]
  • Guo Y [39]
  • Yan R [32]
  • Ye F [23]
  • Chi X [18]
  • Zhang Y [10]
  • Xia L [10]
  • Chi X [9]
  • Shi Y [9]
  • Lei J [9]
  • Muller J [8]
  • Gertsch J [8]
  • Huang J [7]
  • Zhou J [6]
  • Jiang S [4]
  • Shen Y [4]
  • Yu C [3]
  • Xu J [2]
  • Chen W [2]
  • Shi ZL [2]
  • Xie Y [2]
  • Zhang J [2]
  • Wang HW [2]
  • Drelich A [2]
  • Chi X [2]
  • Hao M [2]
  • Huang J [2]
  • Lu L [2]
  • Li J [2]
  • Bi W [2]
  • Zhang Z [2]
  • Ma H [2]
  • Chi XM [2]
  • Fu L [2]
  • Wang J [2]
  • Song X [2]
  • Fan P [2]
  • Chen Y [2]
  • Zhang B [2]
  • Zhang Z [2]
  • Zhang J [2]
  • Ju B [2]
  • Dang B [2]
  • Zhao J [2]
  • Chen Z [2]
  • Xu W [2]
  • Wang X [2]
  • Zhang G [2]
  • Yang Y [2]
  • Hou L [2]
  • Liu N [2]
  • Dong Y [2]
  • Zhang L [2]
  • Lu P [1]
  • Zhou Q [1]
  • Min J [1]
  • Wang F [1]
  • Huang BD [1]
  • Li YN [1]
  • Zhang YY [1]
  • Hu X [1]
  • Stockwell BR [1]
  • Ma D [1]
  • Yan RH [1]
  • Li XR [1]
  • Lu X [1]
  • Pan X [1]
  • Chi XM [1]
  • Zhan X [1]
  • Zhang YY [1]
  • Wang Z [1]

Journal

  • CELL RES [35]
  • CELL DISCOV [15]
  • SCIENCE [12]
  • TO BE PUBLISHED [11]
  • SCI ADV [6]
  • DIAN ZI XIAN WEI XUE BAO [4]
  • MEDCOMM (2020) [4]
  • NAT COMMUN [4]
  • SIGNAL TRANSDUCT TARGET THER [2]
  • EMERG MICROBES INFECT [1]
  • STRUCTURE [1]

Software

  • RELION [69]
  • CRYOSPARC [18]

Microscope

  • FEI TITAN KRIOS [91]
  • FEI TALOS ARCTICA [3]

Electron Source

  • FIELD EMISSION GUN [94]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [85]
  • GATAN K2 QUANTUM 4K X 4K [7]
  • GATAN K2 SUMMIT 4K X 4K [1]
  • GATAN K3 6K X 4K [1]

External links

  • PDBe-Kb [60]
  • UniProt [60]
  • Gene Ontology [57]
  • InterPro [57]
  • PDB [57]
  • Pfam [57]
  • ChEBI [53]
  • ChEMBL [52]
  • AlphaFold DB [44]
  • Complex Portal [30]
  • DrugBank [28]
Sort by: Download
Showing 1 - 10 of 94. Page 1 of 10
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EMD-61844
Download Map
3D View
Overall structure of human EAAT2 in the substrate-free state
Release date: April 30, 2025
Resolution: 2.82 Å
EM Method: Single-particle
Fitted PDBs: 9jvv
Q-score: 0.555

Xia LY, Zhang YY, Shi Y, Huang J, Zhou Q

Dian Zi Xian Wei Xue Bao (2025) [ ]

EMD-61845
Download Map
3D View
Overall structure of human EAAT2 bound with inhibitor WAY-213613
Release date: April 30, 2025
Resolution: 3.41 Å
EM Method: Single-particle
Fitted PDBs: 9jvw
Q-score: 0.411

Xia LY, Zhang YY, Shi Y, Huang J, Zhou Q

Dian Zi Xian Wei Xue Bao (2025) [ ]

EMD-61846
Download Map
3D View
Overall structure of human EAAT2 bound with activator GT949
Release date: April 9, 2025
Resolution: 3.97 Å
EM Method: Single-particle
Fitted PDBs: 9jvx
Q-score: 0.366

Xia LY, Zhang YY, Shi Y, Huang J, Zhou Q

Dian Zi Xian Wei Xue Bao (2025) [ ]

EMD-39645
Download Map
3D View
The structure of HKU1-B S protein with bsAb1
Release date: July 31, 2024
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8yww
Q-score: 0.291

Sun H, Xia L, Li J, Zhang Y, Zhang G, Huang P, Wang X, Cui Y, Fang T, Fan P, Zhou Q, Chi X, Yu C

Emerg Microbes Infect (2024) 13 pp. 2373307-2373307 [ DOI: doi:10.1080/22221751.2024.2373307 Pubmed: 38953857 ]

EMD-34872
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3D View
S protein of SARS-CoV-2 in complex with 3711
Release date: June 5, 2024
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8hlc
Q-score: 0.431

Zhang Z, Zhang Y, Zhang Y, Cheng L, Zhang L, Yan Q, Liu X, Chen J, Dai J, Guo Y, Wei P, Xiong X, Xiao J, Zhu A, Zhuo J, Cai R, Zhang J, Rao H, Qu B, Zhang S, Feng J, Cheng J, Su J, Chen C, Li S, Zhang Y, Chen L, Jin Y, Xu Y, Liu X, Li Y, Zhao J, Wang Y, Zhou Q, Zhao J

MedComm (2020) (2024) 5 pp. e70008-e70008 [ Pubmed: 39619228 DOI: doi:10.1002/mco2.70008 ]

EMD-34873
Download Map
3D View
S protein of SARS-CoV-2 in complex with 3711 focused on NTD_3711 sub-complex
Release date: June 5, 2024
Resolution: 2.9 Å
EM Method: Single-particle

Zhang Z, Zhang Y, Zhang Y, Cheng L, Zhang L, Yan Q, Liu X, Chen J, Dai J, Guo Y, Wei P, Xiong X, Xiao J, Zhu A, Zhuo J, Cai R, Zhang J, Rao H, Qu B, Zhang S, Feng J, Cheng J, Su J, Chen C, Li S, Zhang Y, Chen L, Jin Y, Xu Y, Liu X, Li Y, Zhao J, Wang Y, Zhou Q, Zhao J

MedComm (2020) (2024) 5 pp. e70008-e70008 [ Pubmed: 39619228 DOI: doi:10.1002/mco2.70008 ]

EMD-34874
Download Map
3D View
S protein of SARS-CoV-2 in complex with 26434
Release date: June 5, 2024
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8hld
Q-score: 0.324

Zhang Z, Zhang Y, Zhang Y, Cheng L, Zhang L, Yan Q, Liu X, Chen J, Dai J, Guo Y, Wei P, Xiong X, Xiao J, Zhu A, Zhuo J, Cai R, Zhang J, Rao H, Qu B, Zhang S, Feng J, Cheng J, Su J, Chen C, Li S, Zhang Y, Chen L, Jin Y, Xu Y, Liu X, Li Y, Zhao J, Wang Y, Zhou Q, Zhao J

MedComm (2020) (2024) 5 pp. e70008-e70008 [ Pubmed: 39619228 DOI: doi:10.1002/mco2.70008 ]

EMD-34875
Download Map
3D View
S protein of SARS-CoV-2 in complex with 26434 focused on NTD_26434 sub-complex
Release date: June 5, 2024
Resolution: 2.9 Å
EM Method: Single-particle

Zhang Z, Zhang Y, Zhang Y, Cheng L, Zhang L, Yan Q, Liu X, Chen J, Dai J, Guo Y, Wei P, Xiong X, Xiao J, Zhu A, Zhuo J, Cai R, Zhang J, Rao H, Qu B, Zhang S, Feng J, Cheng J, Su J, Chen C, Li S, Zhang Y, Chen L, Jin Y, Xu Y, Liu X, Li Y, Zhao J, Wang Y, Zhou Q, Zhao J

MedComm (2020) (2024) 5 pp. e70008-e70008 [ Pubmed: 39619228 DOI: doi:10.1002/mco2.70008 ]

EMD-38828
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3D View
Closed conformation of HKU1-B S protein after incubation of the receptor
Release date: May 1, 2024
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 8y19
Q-score: 0.635

Xia L, Zhang Y, Zhou Q

Cell Res (2024) 34 pp. 526-529 [ DOI: doi:10.1038/s41422-024-00958-9 Pubmed: 38641728 ]

EMD-38829
Download Map
3D View
1up-1 conformation of HKU1-B S protein after incubation of the receptor
Release date: May 1, 2024
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8y1a
Q-score: 0.545

Xia L, Zhang Y, Zhou Q

Cell Res (2024) 34 pp. 526-529 [ DOI: doi:10.1038/s41422-024-00958-9 Pubmed: 38641728 ]

Sort by: Download
Showing 1 - 10 of 94. Page 1 of 10
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [94]

Current status

  • REL [94]

Sample type

  • Complex [90]
  • Protein [61]
  • Ligand [54]
  • Cell [4]

Organism

  • Homo sapiens [76]
  • Severe acute respiratory syndrome coronavirus [26]
  • Human coronavirus hku1 [9]
  • Severe acute respiratory syndrome coronavirus [2]

EM Method

  • Single-particle [94]

Resolution

  • ≥ 2Å and < 3Å [45]
  • ≥ 3Å and < 4Å [35]
  • ≥ 4Å and < 5Å [8]
  • ≥ 6Å and < 8Å [3]
  • ≥ 8Å and < 12Å [3]

Model molecular weight

  • 100-250 kDa [20]
  • 250-500 kDa [22]
  • 500-1000 kDa [14]
  • 1-2 MDa [1]

Release Date

  • 2025 [3]
  • 2024 [15]
  • 2023 [3]
  • 2022 [12]
  • 2021 [31]
  • 2020 [30]

Author by name

  • Zhou Q [94]
  • Zhang YY [73]
  • Zhang Y [69]
  • Li Y [57]
  • Yan RH [57]
  • Yan R [56]
  • Xia L [48]
  • Guo Y [39]
  • Chi X [30]
  • Zhong X [28]
  • Li YN [27]
  • Ye F [23]
  • Chi XM [19]
  • Chen Y [18]
  • Guo YY [13]
  • Huang J [13]
  • Li XR [13]
  • Xia LY [13]
  • Shi Y [12]
  • Lei J [9]
  • Su Q [9]
  • Zhang J [9]
  • Altmann KH [8]
  • Gertsch J [8]
  • Muller J [8]
  • Singer S [8]
  • Wang Y [8]
  • Zhang L [8]
  • Zhang Z [8]
  • Zhao J [8]
  • Zhou J [8]
  • Chen J [6]
  • Cheng L [6]
  • Li X [6]
  • Zhang S [6]
  • Wang X [5]
  • Xu W [5]
  • Cai R [4]
  • Chen C [4]
  • Chen L [4]
  • Cheng J [4]
  • Dai J [4]
  • Feng J [4]
  • Huang B [4]
  • Huang BD [4]
  • Jiang S [4]
  • Jin Y [4]
  • Lei JL [4]
  • Li J [4]
  • Li S [4]
  • Liu X [4]
  • Qu B [4]
  • Rao H [4]
  • Shen Y [4]
  • Su J [4]
  • Wang Q [4]
  • Wei P [4]
  • Xiao J [4]
  • Xie Y [4]
  • Xiong X [4]
  • Xu Y [4]
  • Yan Q [4]
  • Zhang B [4]
  • Zhong XY [4]
  • Zhu A [4]
  • Zhuo J [4]
  • Fan P [3]
  • Wang Z [3]
  • Wu L [3]
  • Wu LS [3]
  • Ye FF [3]
  • Yu C [3]
  • Zhang G [3]
  • Bi W [2]
  • Bi WW [2]
  • Bian Y [2]
  • Cai X [2]
  • Chang Y [2]
  • Chen G [2]
  • Chen H [2]
  • Chen P [2]
  • Chen W [2]
  • Chen YL [2]
  • Chen Z [2]
  • Chu W [2]
  • Dang B [2]
  • Dong Y [2]
  • Drelich A [2]
  • Fu L [2]
  • Ge X [2]
  • Gilly J [2]
  • Guo L [2]
  • Han L [2]
  • Hao M [2]
  • He Y [2]
  • Hou L [2]
  • Huang H [2]
  • Ji T [2]
  • Jiang H [2]
  • Ju B [2]

Author by ORCID

  • Li Y [44]
  • Zhou Q [40]
  • Guo Y [39]
  • Yan R [32]
  • Ye F [23]
  • Chi X [18]
  • Zhang Y [10]
  • Xia L [10]
  • Chi X [9]
  • Shi Y [9]
  • Lei J [9]
  • Muller J [8]
  • Gertsch J [8]
  • Huang J [7]
  • Zhou J [6]
  • Jiang S [4]
  • Shen Y [4]
  • Yu C [3]
  • Xu J [2]
  • Chen W [2]
  • Shi ZL [2]
  • Xie Y [2]
  • Zhang J [2]
  • Wang HW [2]
  • Drelich A [2]
  • Chi X [2]
  • Hao M [2]
  • Huang J [2]
  • Lu L [2]
  • Li J [2]
  • Bi W [2]
  • Zhang Z [2]
  • Ma H [2]
  • Chi XM [2]
  • Fu L [2]
  • Wang J [2]
  • Song X [2]
  • Fan P [2]
  • Chen Y [2]
  • Zhang B [2]
  • Zhang Z [2]
  • Zhang J [2]
  • Ju B [2]
  • Dang B [2]
  • Zhao J [2]
  • Chen Z [2]
  • Xu W [2]
  • Wang X [2]
  • Zhang G [2]
  • Yang Y [2]
  • Hou L [2]
  • Liu N [2]
  • Dong Y [2]
  • Zhang L [2]
  • Lu P [1]
  • Zhou Q [1]
  • Min J [1]
  • Wang F [1]
  • Huang BD [1]
  • Li YN [1]
  • Zhang YY [1]
  • Hu X [1]
  • Stockwell BR [1]
  • Ma D [1]
  • Yan RH [1]
  • Li XR [1]
  • Lu X [1]
  • Pan X [1]
  • Chi XM [1]
  • Zhan X [1]
  • Zhang YY [1]
  • Wang Z [1]

Journal

  • CELL RES [35]
  • CELL DISCOV [15]
  • SCIENCE [12]
  • TO BE PUBLISHED [11]
  • SCI ADV [6]
  • DIAN ZI XIAN WEI XUE BAO [4]
  • MEDCOMM (2020) [4]
  • NAT COMMUN [4]
  • SIGNAL TRANSDUCT TARGET THER [2]
  • EMERG MICROBES INFECT [1]
  • STRUCTURE [1]

Software

  • RELION [69]
  • CRYOSPARC [18]

Microscope

  • FEI TITAN KRIOS [91]
  • FEI TALOS ARCTICA [3]

Electron Source

  • FIELD EMISSION GUN [94]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [85]
  • GATAN K2 QUANTUM 4K X 4K [7]
  • GATAN K2 SUMMIT 4K X 4K [1]
  • GATAN K3 6K X 4K [1]

External links

  • PDBe-Kb [60]
  • UniProt [60]
  • Gene Ontology [57]
  • InterPro [57]
  • PDB [57]
  • Pfam [57]
  • ChEBI [53]
  • ChEMBL [52]
  • AlphaFold DB [44]
  • Complex Portal [30]
  • DrugBank [28]