Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!

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grant_code:"31925026"

Filter By

Current Database

  • EMDB [40]

Current status

  • REL [40]

Sample type

  • Cell [30]
  • Protein [13]
  • Complex [10]
  • Ligand [8]

Organism

  • Mus musculus [32]
  • Homo sapiens [5]
  • Influenza a virus [1]
  • Influenza a virus [1]
  • Bos taurus [1]
  • Oryctolagus cuniculus [1]

EM Method

  • Subtomogram averaging [30]
  • Single-particle [8]
  • Helical reconstruction [2]

Resolution

  • < 2Å [1]
  • ≥ 2Å and < 3Å [5]
  • ≥ 3Å and < 4Å [2]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [17]
  • ≥ 8Å and < 12Å [7]
  • ≥ 12Å and < 16Å [2]
  • ≥ 16Å and < 20Å [2]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [3]
  • 250-500 kDa [1]
  • 500-1000 kDa [4]
  • 1-2 MDa [1]
  • 5-10 MDa [1]
  • > 10 MDa [2]

Release Date

  • 2025 [14]
  • 2023 [16]
  • 2021 [8]
  • 2020 [2]

Author by name

  • Sun F [40]
  • Zhu Y [36]
  • Tai L [30]
  • Yin G [30]
  • Yin GL [29]
  • Tai LH [28]
  • Wang B [20]
  • Huang X [18]
  • Chen L [14]
  • Chen S [14]
  • Huang G [14]
  • Lin T [14]
  • Lu Y [14]
  • Ma J [14]
  • Zhang Z [14]
  • Zhang Y [8]
  • Fan H [6]
  • Fan HC [6]
  • Qiao M [6]
  • Song B [6]
  • Xu H [6]
  • Zhai Y [6]
  • Chen H [2]
  • Hsu VW [2]
  • Ji G [2]
  • Li J [2]
  • Li S [2]
  • Pang X [2]
  • Wen Z [2]
  • Xu J [2]
  • Yin CC [2]
  • Zhang L [2]

Author by ORCID

  • Sun F [38]
  • Zhu Y [36]
  • Tai L [30]
  • Yin G [30]
  • Zhang Z [14]
  • Chen S [14]
  • Fan H [6]
  • Qiao M [6]
  • Zhang Y [2]
  • Xu J [2]
  • Huang X [2]
  • Ji G [2]
  • Hsu VW [2]
  • Pang X [2]
  • Zhang L [2]
  • Wen Z [2]

Journal

  • CELL DISCOV [16]
  • CELL RES [14]
  • NAT COMMUN [6]
  • PNAS [2]
  • PROG BIOPHYS MOL BIOL [2]

Software

  • GCTF [6]
  • RELION [5]
  • IHRSR [2]
  • SPIDER [2]
  • CRYOSPARC [1]

Microscope

  • FEI TITAN KRIOS [37]
  • FEI TALOS ARCTICA [3]

Electron Source

  • FIELD EMISSION GUN [40]

Film or detector model

  • GATAN K2 QUANTUM 4K X 4K [36]
  • FEI FALCON II 4K X 4K [2]
  • GATAN K2 SUMMIT 4K X 4K [2]

External links

  • PDB [13]
  • UniProt [13]
  • AlphaFold DB [12]
  • Gene Ontology [11]
  • InterPro [11]
  • PDBe-Kb [11]
  • Pfam [11]
  • ChEBI [8]
  • ChEMBL [7]
  • DrugBank [6]
  • Complex Portal [5]
  • EMPIAR [2]
Sort by: Download
Showing 1 - 10 of 40. Page 1 of 4
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Preview first 10
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EMD-60428
Download Map
3D View
C1 half of the central apparatus in mouse sperm axoneme
Release date: June 4, 2025
Resolution: 7.7 Å
EM Method: Subtomogram averaging

Zhu Y, Lin T, Yin G, Tai L, Chen L, Ma J, Huang G, Lu Y, Zhang Z, Wang B, Chen S, Sun F

Cell Res (2025) 35 pp. 551-567 [ Pubmed: 40473901 DOI: doi:10.1038/s41422-025-01135-2 ]

EMD-60429
Download Map
3D View
C1a part of the central apparatus in mouse sperm axoneme
Release date: June 4, 2025
Resolution: 9.4 Å
EM Method: Subtomogram averaging

Zhu Y, Lin T, Yin G, Tai L, Chen L, Ma J, Huang G, Lu Y, Zhang Z, Wang B, Chen S, Sun F

Cell Res (2025) 35 pp. 551-567 [ Pubmed: 40473901 DOI: doi:10.1038/s41422-025-01135-2 ]

EMD-60430
Download Map
3D View
C1b part of the central apparatus in mouse sperm axoneme
Release date: June 4, 2025
Resolution: 8.9 Å
EM Method: Subtomogram averaging

Zhu Y, Lin T, Yin G, Tai L, Chen L, Ma J, Huang G, Lu Y, Zhang Z, Wang B, Chen S, Sun F

Cell Res (2025) 35 pp. 551-567 [ Pubmed: 40473901 DOI: doi:10.1038/s41422-025-01135-2 ]

EMD-60431
Download Map
3D View
C2 half of the central apparatus in mouse sperm axoneme
Release date: June 4, 2025
Resolution: 6.6 Å
EM Method: Subtomogram averaging

Zhu Y, Lin T, Yin G, Tai L, Chen L, Ma J, Huang G, Lu Y, Zhang Z, Wang B, Chen S, Sun F

Cell Res (2025) 35 pp. 551-567 [ Pubmed: 40473901 DOI: doi:10.1038/s41422-025-01135-2 ]

EMD-60432
Download Map
3D View
C2 half of the central apparatus in mouse sperm axoneme with 8-nm repeat
Release date: June 4, 2025
Resolution: 5.5 Å
EM Method: Subtomogram averaging

Zhu Y, Lin T, Yin G, Tai L, Chen L, Ma J, Huang G, Lu Y, Zhang Z, Wang B, Chen S, Sun F

Cell Res (2025) 35 pp. 551-567 [ Pubmed: 40473901 DOI: doi:10.1038/s41422-025-01135-2 ]

EMD-60436
Download Map
3D View
C2a part of the central apparatus in mouse sperm axoneme
Release date: June 4, 2025
Resolution: 7.8 Å
EM Method: Subtomogram averaging

Zhu Y, Lin T, Yin G, Tai L, Chen L, Ma J, Huang G, Lu Y, Zhang Z, Wang B, Chen S, Sun F

Cell Res (2025) 35 pp. 551-567 [ Pubmed: 40473901 DOI: doi:10.1038/s41422-025-01135-2 ]

EMD-60446
Download Map
3D View
C2b part of the central apparatus in mouse sperm axoneme
Release date: June 4, 2025
Resolution: 9.9 Å
EM Method: Subtomogram averaging

Zhu Y, Lin T, Yin G, Tai L, Chen L, Ma J, Huang G, Lu Y, Zhang Z, Wang B, Chen S, Sun F

Cell Res (2025) 35 pp. 551-567 [ Pubmed: 40473901 DOI: doi:10.1038/s41422-025-01135-2 ]

EMD-60448
Download Map
3D View
Cm part of the central apparatus in mouse sperm axoneme
Release date: June 4, 2025
Resolution: 7.7 Å
EM Method: Subtomogram averaging

Zhu Y, Lin T, Yin G, Tai L, Chen L, Ma J, Huang G, Lu Y, Zhang Z, Wang B, Chen S, Sun F

Cell Res (2025) 35 pp. 551-567 [ Pubmed: 40473901 DOI: doi:10.1038/s41422-025-01135-2 ]

EMD-60449
Download Map
3D View
Cma1 part of the central apparatus in mouse sperm axoneme
Release date: June 4, 2025
Resolution: 18.0 Å
EM Method: Subtomogram averaging

Zhu Y, Lin T, Yin G, Tai L, Chen L, Ma J, Huang G, Lu Y, Zhang Z, Wang B, Chen S, Sun F

Cell Res (2025) 35 pp. 551-567 [ Pubmed: 40473901 DOI: doi:10.1038/s41422-025-01135-2 ]

EMD-60454
Download Map
3D View
Cma2 part of the central apparatus in mouse sperm axoneme
Release date: June 4, 2025
Resolution: 16.0 Å
EM Method: Subtomogram averaging

Zhu Y, Lin T, Yin G, Tai L, Chen L, Ma J, Huang G, Lu Y, Zhang Z, Wang B, Chen S, Sun F

Cell Res (2025) 35 pp. 551-567 [ Pubmed: 40473901 DOI: doi:10.1038/s41422-025-01135-2 ]

Sort by: Download
Showing 1 - 10 of 40. Page 1 of 4
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [40]

Current status

  • REL [40]

Sample type

  • Cell [30]
  • Protein [13]
  • Complex [10]
  • Ligand [8]

Organism

  • Mus musculus [32]
  • Homo sapiens [5]
  • Influenza a virus [1]
  • Influenza a virus [1]
  • Bos taurus [1]
  • Oryctolagus cuniculus [1]

EM Method

  • Subtomogram averaging [30]
  • Single-particle [8]
  • Helical reconstruction [2]

Resolution

  • < 2Å [1]
  • ≥ 2Å and < 3Å [5]
  • ≥ 3Å and < 4Å [2]
  • ≥ 4Å and < 5Å [2]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [17]
  • ≥ 8Å and < 12Å [7]
  • ≥ 12Å and < 16Å [2]
  • ≥ 16Å and < 20Å [2]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [3]
  • 250-500 kDa [1]
  • 500-1000 kDa [4]
  • 1-2 MDa [1]
  • 5-10 MDa [1]
  • > 10 MDa [2]

Release Date

  • 2025 [14]
  • 2023 [16]
  • 2021 [8]
  • 2020 [2]

Author by name

  • Sun F [40]
  • Zhu Y [36]
  • Tai L [30]
  • Yin G [30]
  • Yin GL [29]
  • Tai LH [28]
  • Wang B [20]
  • Huang X [18]
  • Chen L [14]
  • Chen S [14]
  • Huang G [14]
  • Lin T [14]
  • Lu Y [14]
  • Ma J [14]
  • Zhang Z [14]
  • Zhang Y [8]
  • Fan H [6]
  • Fan HC [6]
  • Qiao M [6]
  • Song B [6]
  • Xu H [6]
  • Zhai Y [6]
  • Chen H [2]
  • Hsu VW [2]
  • Ji G [2]
  • Li J [2]
  • Li S [2]
  • Pang X [2]
  • Wen Z [2]
  • Xu J [2]
  • Yin CC [2]
  • Zhang L [2]

Author by ORCID

  • Sun F [38]
  • Zhu Y [36]
  • Tai L [30]
  • Yin G [30]
  • Zhang Z [14]
  • Chen S [14]
  • Fan H [6]
  • Qiao M [6]
  • Zhang Y [2]
  • Xu J [2]
  • Huang X [2]
  • Ji G [2]
  • Hsu VW [2]
  • Pang X [2]
  • Zhang L [2]
  • Wen Z [2]

Journal

  • CELL DISCOV [16]
  • CELL RES [14]
  • NAT COMMUN [6]
  • PNAS [2]
  • PROG BIOPHYS MOL BIOL [2]

Software

  • GCTF [6]
  • RELION [5]
  • IHRSR [2]
  • SPIDER [2]
  • CRYOSPARC [1]

Microscope

  • FEI TITAN KRIOS [37]
  • FEI TALOS ARCTICA [3]

Electron Source

  • FIELD EMISSION GUN [40]

Film or detector model

  • GATAN K2 QUANTUM 4K X 4K [36]
  • FEI FALCON II 4K X 4K [2]
  • GATAN K2 SUMMIT 4K X 4K [2]

External links

  • PDB [13]
  • UniProt [13]
  • AlphaFold DB [12]
  • Gene Ontology [11]
  • InterPro [11]
  • PDBe-Kb [11]
  • Pfam [11]
  • ChEBI [8]
  • ChEMBL [7]
  • DrugBank [6]
  • Complex Portal [5]
  • EMPIAR [2]