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grant_code:"2022-04511"

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Current Database

  • EMDB [13]

Current status

  • REL [13]

Sample type

  • Complex [13]
  • Ligand [13]
  • Protein [13]
  • RNA [13]

Organism

  • Escherichia coli [8]
  • Staphylococcus aureus [8]
  • Staphylococcus aureus [6]
  • Escherichia coli [5]
  • Escherichia coli [1]

EM Method

  • Single-particle [13]

Resolution

  • < 2Å [1]
  • ≥ 2Å and < 3Å [12]

Model molecular weight

  • 2-5 MDa [13]

Release Date

  • 2025 [10]
  • 2024 [3]

Author by name

  • Larsson DSD [13]
  • Selmer M [13]
  • Gonzalez-lopez A [11]
  • Sanyal S [11]
  • Ge X [8]
  • Sihlbom Wallem C [8]
  • Cain BN [3]
  • Chavez MG [3]
  • Hergenrother PJ [3]
  • Koripella RK [3]
  • Akbar S [2]
  • Chen Y [2]
  • Krishnaswamy S [2]

Author by ORCID

  • Gonzalez-lopez A [11]
  • Larsson DSD [10]
  • Selmer M [10]
  • Ge X [8]
  • Sanyal S [8]
  • Akbar S [2]
  • Krishnaswamy S [2]

Journal

  • NAT COMMUN [10]
  • SCI REP [3]

Software

  • CRYOSPARC [13]

Microscope

  • TFS KRIOS [11]
  • TFS GLACIOS [2]

Electron Source

  • FIELD EMISSION GUN [13]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [7]
  • TFS FALCON 4I 4K X 4K [4]
  • FEI FALCON III 4K X 4K [2]

External links

  • AlphaFold DB [13]
  • ChEBI [13]
  • ChEMBL [13]
  • DrugBank [13]
  • Gene Ontology [13]
  • InterPro [13]
  • PDB [13]
  • PDBe-Kb [13]
  • Pfam [13]
  • UniProt [13]
  • EMPIAR [11]
  • Complex Portal [8]
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Showing 1 - 10 of 13. Page 1 of 2
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EMD-51679
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70S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codon
Release date: May 28, 2025
Resolution: 2.61 Å
EM Method: Single-particle
Fitted PDBs: 9gxx
Q-score: 0.578

Krishnaswamy S, Akbar S, Larsson DSD, Chen Y, Selmer M

Nat Commun (2025) 16 pp. 5402-5402 [ DOI: doi:10.1038/s41467-025-61016-5 Pubmed: 40571681 ]

EMD-51758
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70S ribosome with cognate tRNASer3 bound to A-site AGC codon
Release date: May 28, 2025
Resolution: 2.49 Å
EM Method: Single-particle
Fitted PDBs: 9h0l
Q-score: 0.586

Krishnaswamy S, Akbar S, Larsson DSD, Chen Y, Selmer M

Nat Commun (2025) 16 pp. 5402-5402 [ DOI: doi:10.1038/s41467-025-61016-5 Pubmed: 40571681 ]

EMD-51350
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Raw data
EMPIAR-12731
Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state CHI
Release date: March 26, 2025
Resolution: 2.24 Å
EM Method: Single-particle
Fitted PDBs: 9gha
Q-score: 0.615

Gonzalez-Lopez A, Ge X, Larsson DSD, Sihlbom Wallem C, Sanyal S, Selmer M

Nat Commun (2025) 16 pp. 3693-3693 [ DOI: doi:10.1038/s41467-025-58902-3 Pubmed: 40251147 ]

EMD-51351
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Raw data
EMPIAR-12731
Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G in post-translocational state POST
Release date: March 26, 2025
Resolution: 2.21 Å
EM Method: Single-particle
Fitted PDBs: 9ghb
Q-score: 0.637

Gonzalez-Lopez A, Ge X, Larsson DSD, Sihlbom Wallem C, Sanyal S, Selmer M

Nat Commun (2025) 16 pp. 3693-3693 [ DOI: doi:10.1038/s41467-025-58902-3 Pubmed: 40251147 ]

EMD-51352
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Raw data
EMPIAR-12731
Pre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB FusB-EF-G-70S
Release date: March 26, 2025
Resolution: 2.79 Å
EM Method: Single-particle
Fitted PDBs: 9ghc
Q-score: 0.536

Gonzalez-Lopez A, Ge X, Larsson DSD, Sihlbom Wallem C, Sanyal S, Selmer M

Nat Commun (2025) 16 pp. 3693-3693 [ DOI: doi:10.1038/s41467-025-58902-3 Pubmed: 40251147 ]

EMD-51353
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Raw data
EMPIAR-12731
Escherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G FusB-EF-G-70S
Release date: March 26, 2025
Resolution: 2.41 Å
EM Method: Single-particle
Fitted PDBs: 9ghd
Q-score: 0.624

Gonzalez-Lopez A, Ge X, Larsson DSD, Sihlbom Wallem C, Sanyal S, Selmer M

Nat Commun (2025) 16 pp. 3693-3693 [ DOI: doi:10.1038/s41467-025-58902-3 Pubmed: 40251147 ]

EMD-51354
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Raw data
EMPIAR-12731
Staphylococcus aureus FusB bound to the small subunit of the Escherichia coli 70S ribosome FusB-70S:SSU
Release date: March 26, 2025
Resolution: 1.87 Å
EM Method: Single-particle
Fitted PDBs: 9ghe
Q-score: 0.731

Gonzalez-Lopez A, Ge X, Larsson DSD, Sihlbom Wallem C, Sanyal S, Selmer M

Nat Commun (2025) 16 pp. 3693-3693 [ DOI: doi:10.1038/s41467-025-58902-3 Pubmed: 40251147 ]

EMD-51355
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3D View
Raw data
EMPIAR-12731
Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome FusB-70S:LSU
Release date: March 26, 2025
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 9ghf
Q-score: 0.625

Gonzalez-Lopez A, Ge X, Larsson DSD, Sihlbom Wallem C, Sanyal S, Selmer M

Nat Commun (2025) 16 pp. 3693-3693 [ DOI: doi:10.1038/s41467-025-58902-3 Pubmed: 40251147 ]

EMD-51356
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3D View
Raw data
EMPIAR-12731
Staphylococcus aureus FusB bound to the small subunit of the S. aureus 70S ribosome FusB-Sa70S:SSU
Release date: March 26, 2025
Resolution: 2.22 Å
EM Method: Single-particle
Fitted PDBs: 9ghg
Q-score: 0.639

Gonzalez-Lopez A, Ge X, Larsson DSD, Sihlbom Wallem C, Sanyal S, Selmer M

Nat Commun (2025) 16 pp. 3693-3693 [ DOI: doi:10.1038/s41467-025-58902-3 Pubmed: 40251147 ]

EMD-51357
Download Map
3D View
Raw data
EMPIAR-12731
Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome FusB-Sa70S:LSU
Release date: March 26, 2025
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9ghh
Q-score: 0.549

Gonzalez-Lopez A, Ge X, Larsson DSD, Sihlbom Wallem C, Sanyal S, Selmer M

Nat Commun (2025) 16 pp. 3693-3693 [ DOI: doi:10.1038/s41467-025-58902-3 Pubmed: 40251147 ]

Sort by: Download
Showing 1 - 10 of 13. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [13]

Current status

  • REL [13]

Sample type

  • Complex [13]
  • Ligand [13]
  • Protein [13]
  • RNA [13]

Organism

  • Escherichia coli [8]
  • Staphylococcus aureus [8]
  • Staphylococcus aureus [6]
  • Escherichia coli [5]
  • Escherichia coli [1]

EM Method

  • Single-particle [13]

Resolution

  • < 2Å [1]
  • ≥ 2Å and < 3Å [12]

Model molecular weight

  • 2-5 MDa [13]

Release Date

  • 2025 [10]
  • 2024 [3]

Author by name

  • Larsson DSD [13]
  • Selmer M [13]
  • Gonzalez-lopez A [11]
  • Sanyal S [11]
  • Ge X [8]
  • Sihlbom Wallem C [8]
  • Cain BN [3]
  • Chavez MG [3]
  • Hergenrother PJ [3]
  • Koripella RK [3]
  • Akbar S [2]
  • Chen Y [2]
  • Krishnaswamy S [2]

Author by ORCID

  • Gonzalez-lopez A [11]
  • Larsson DSD [10]
  • Selmer M [10]
  • Ge X [8]
  • Sanyal S [8]
  • Akbar S [2]
  • Krishnaswamy S [2]

Journal

  • NAT COMMUN [10]
  • SCI REP [3]

Software

  • CRYOSPARC [13]

Microscope

  • TFS KRIOS [11]
  • TFS GLACIOS [2]

Electron Source

  • FIELD EMISSION GUN [13]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [7]
  • TFS FALCON 4I 4K X 4K [4]
  • FEI FALCON III 4K X 4K [2]

External links

  • AlphaFold DB [13]
  • ChEBI [13]
  • ChEMBL [13]
  • DrugBank [13]
  • Gene Ontology [13]
  • InterPro [13]
  • PDB [13]
  • PDBe-Kb [13]
  • Pfam [13]
  • UniProt [13]
  • EMPIAR [11]
  • Complex Portal [8]