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grant_code:"2017YFC0840300"

Filter By

Current Database

  • EMDB [58]

Current status

  • REL [58]

Sample type

  • Protein [57]
  • Complex [53]
  • Ligand [39]
  • RNA [20]
  • Virus [5]

Organism

  • Severe acute respiratory syndrome coronavirus [22]
  • Mycolicibacterium smegmatis [16]
  • Mycolicibacterium smegmatis [8]
  • Mycobacterium tuberculosis [8]
  • Foot-and-mouth disease virus [5]
  • Hepatitis b virus [5]
  • Avian orthoavulavirus 1 [3]
  • Mycolicibacterium smegmatis [2]
  • Bacteroides xylanisolvens [1]
  • Synthetic construct [1]
  • Homo sapiens [1]

EM Method

  • Single-particle [58]

Resolution

  • ≥ 2Å and < 3Å [22]
  • ≥ 3Å and < 4Å [32]
  • ≥ 4Å and < 5Å [1]
  • ≥ 6Å and < 8Å [1]
  • ≥ 8Å and < 12Å [2]

Model molecular weight

  • 50-100 kDa [2]
  • 100-250 kDa [17]
  • 250-500 kDa [25]
  • 500-1000 kDa [5]
  • 1-2 MDa [1]
  • 2-5 MDa [1]

Release Date

  • 2024 [7]
  • 2023 [11]
  • 2022 [6]
  • 2021 [13]
  • 2020 [20]
  • 2018 [1]

Author by name

  • Rao Z [58]
  • Gao Y [49]
  • Guddat LW [48]
  • Wang Q [34]
  • Yang X [32]
  • Lou Z [27]
  • Liu Z [24]
  • Ge J [21]
  • Yan L [21]
  • Yang H [21]
  • Huang Y [19]
  • Rao ZH [19]
  • Liu F [18]
  • Xu W [16]
  • Zhang Y [16]
  • Zhang B [15]
  • Gao S [13]
  • Gong H [12]
  • Mu A [12]
  • Tang Y [12]
  • Wang T [12]
  • Hu T [11]
  • Ji W [11]
  • Wang H [11]
  • Wang J [11]
  • Wang W [11]
  • Zhou X [11]
  • Huang B [10]
  • Lan W [10]
  • Li X [10]
  • Lu P [10]
  • Shi L [10]
  • Tan L [10]
  • Xu S [10]
  • Ye S [10]
  • Yu F [10]
  • Zhou F [10]
  • Zhu Y [10]
  • Li J [9]
  • Liang J [9]
  • Lou ZY [9]
  • Yan LM [9]
  • Zhou S [9]
  • Gao R [8]
  • Huang YC [8]
  • Lai Y [8]
  • Zhang L [8]
  • Zhao Y [8]
  • Cao L [7]
  • Zheng L [7]
  • Batt SM [6]
  • Besra GS [6]
  • Bi L [6]
  • Gurcha SS [6]
  • Sun Q [6]
  • Veerapen N [6]
  • Zhang X [6]
  • Zhao W [6]
  • Zhu C [6]
  • Du Z [5]
  • Fang X [5]
  • Fu S [5]
  • Gong P [5]
  • Hu Z [5]
  • Jiang B [5]
  • Li M [5]
  • Li S [5]
  • Liu Q [5]
  • Liu ZY [5]
  • Sun S [5]
  • Wang M [5]
  • Wang P [5]
  • Wang X [5]
  • Wu J [5]
  • Wu L [5]
  • Xiong Z [5]
  • Zhang W [5]
  • Bai F [4]
  • Chen Y [4]
  • Gao H [4]
  • Gao RG [4]
  • Gong HR [4]
  • Qin L [4]
  • Ran Y [4]
  • Ren P [4]
  • Shui G [4]
  • Tian C [4]
  • Wang Y [4]
  • Wu C [4]
  • Wu F [4]
  • Yang Y [4]
  • Yu L [4]
  • Zhang Q [4]
  • Chen H [3]
  • Cong J [3]
  • Feng X [3]
  • Fu W [3]
  • Jingyuan C [3]
  • Kang H [3]
  • Lam SM [3]

Author by ORCID

  • Rao Z [29]
  • Gao Y [24]
  • Guddat LW [24]
  • Wang Q [20]
  • Xu W [16]
  • Zhang B [14]
  • Yang H [14]
  • Liu F [14]
  • Ji W [11]
  • Lu P [10]
  • Gong H [10]
  • Hu T [10]
  • Tang Y [9]
  • Yang X [9]
  • Lou Z [9]
  • Yang X [9]
  • Lai Y [8]
  • Zhou X [8]
  • Liang J [8]
  • Mu A [8]
  • Wang T [7]
  • Li J [7]
  • Zhao Y [6]
  • Batt SM [6]
  • Veerapen N [6]
  • Gao R [5]
  • Cao L [5]
  • Wang X [5]
  • Fu S [5]
  • Hu Z [5]
  • Wang P [5]
  • Sun S [4]
  • Ren P [4]
  • Qin L [4]
  • Wu C [4]
  • Ran Y [4]
  • Wu L [4]
  • Xiong Z [4]
  • Zhang L [4]
  • Wang Y [4]
  • Besra GS [4]
  • Zhang Q [4]
  • Bai F [4]
  • Wu F [4]
  • Rao Z [3]
  • Zhou S [3]
  • Chen Y [3]
  • Ran T [3]
  • Shui G [3]
  • Chen H [3]
  • Gao Y [3]
  • Sun Q [2]
  • Wang H [2]
  • Lam SM [2]
  • Gong H [2]
  • Yu L [2]
  • Wang Q [2]
  • Yan L [2]
  • Tian C [2]
  • Yu L [2]
  • Zhao S [1]
  • Zhang XC [1]
  • Wu Y [1]
  • Liu ZJ [1]
  • Robinson CV [1]
  • Shui G [1]
  • Yang C [1]
  • Sun F [1]
  • Roth BL [1]
  • Peng W [1]
  • Guddat LW [1]
  • Tian C [1]
  • Xu A [1]
  • Wang S [1]
  • Wong LL [1]
  • Yang Y [1]
  • Wang Q [1]
  • Wong LL [1]

Journal

  • CELL [17]
  • SCIENCE [12]
  • NAT COMMUN [9]
  • PROTEIN CELL [6]
  • PNAS [5]
  • SCI ADV [4]
  • ELIFE [3]
  • CELL REP [1]
  • STRUCTURE [1]

Software

  • CRYOSPARC [19]
  • RELION [8]
  • GCTF [2]

Microscope

  • FEI TITAN KRIOS [50]
  • FEI TITAN [5]
  • FEI POLARA 300 [1]
  • FEI TALOS ARCTICA [1]
  • FEI TECNAI ARCTICA [1]

Electron Source

  • FIELD EMISSION GUN [54]
  • OTHER [3]
  • TUNGSTEN HAIRPIN [1]

Film or detector model

  • GATAN K2 QUANTUM 4K X 4K [28]
  • GATAN K3 6K X 4K [20]
  • GATAN K2 SUMMIT 4K X 4K [9]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • UniProt [56]
  • PDBe-Kb [53]
  • PDB [51]
  • InterPro [48]
  • Pfam [48]
  • Gene Ontology [46]
  • ChEBI [36]
  • ChEMBL [34]
  • DrugBank [34]
  • AlphaFold DB [24]
  • Complex Portal [22]
  • SCOP2 [4]
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Showing 1 - 10 of 58. Page 1 of 6
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EMD-39395
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3D View
Cryo-EM structure of Hepatitis B virus surface antigen subviral particle with D2 symmetry
Release date: Sept. 18, 2024
Resolution: 6.6 Å
EM Method: Single-particle
Fitted PDBs: 8ymj
Q-score: 0.233

Wang Q, Wang T, Cao L, Mu A, Fu S, Wang P, Gao Y, Ji W, Liu Z, Du Z, Guddat LW, Zhang W, Li S, Li X, Lou Z, Wang X, Hu Z, Rao Z

Science (2024) 385 pp. 1217-1224 [ Pubmed: 39264996 DOI: doi:10.1126/science.adp1453 ]

EMD-39396
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Localized reconstruction of Hepatitis B virus surface antigen dimer in the subviral particle with D2 symmetry from dataset A0
Release date: Sept. 18, 2024
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8ymk
Q-score: 0.242

Wang Q, Wang T, Cao L, Mu A, Fu S, Wang P, Gao Y, Ji W, Liu Z, Du Z, Guddat LW, Zhang W, Li S, Li X, Lou Z, Wang X, Hu Z, Rao Z

Science (2024) 385 pp. 1217-1224 [ Pubmed: 39264996 DOI: doi:10.1126/science.adp1453 ]

EMD-39397
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3D View
Cryo-EM structure of Hepatitis B virus surface antigen subviral particle with D4 symmetry
Release date: Sept. 18, 2024
Resolution: 8.5 Å
EM Method: Single-particle

Wang Q, Wang T, Cao L, Mu A, Fu S, Wang P, Gao Y, Ji W, Liu Z, Du Z, Guddat LW, Zhang W, Li S, Li X, Lou Z, Wang X, Hu Z, Rao Z

Science (2024) 385 pp. 1217-1224 [ Pubmed: 39264996 DOI: doi:10.1126/science.adp1453 ]

EMD-39404
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3D View
Localized reconstruction of Hepatitis B virus surface antigen dimer in the subviral particle with D2 symmetry from dataset A
Release date: Sept. 18, 2024
Resolution: 3.7 Å
EM Method: Single-particle

Wang Q, Wang T, Cao L, Mu A, Fu S, Wang P, Gao Y, Ji W, Liu Z, Du Z, Guddat LW, Zhang W, Li S, Li X, Lou Z, Wang X, Hu Z, Rao Z

Science (2024) 385 pp. 1217-1224 [ Pubmed: 39264996 DOI: doi:10.1126/science.adp1453 ]

EMD-60451
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3D View
Cryo-EM structure of Hepatitis B virus surface antigen subviral particle ellipsoidal shape with C1 symmetry
Release date: Sept. 18, 2024
Resolution: 10.23 Å
EM Method: Single-particle

Wang Q, Wang T, Cao L, Mu A, Fu S, Wang P, Gao Y, Ji W, Liu Z, Du Z, Guddat LW, Zhang W, Li S, Li X, Lou Z, Wang X, Hu Z, Rao Z

Science (2024) 385 pp. 1217-1224 [ Pubmed: 39264996 DOI: doi:10.1126/science.adp1453 ]

EMD-34314
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SARS-CoV-2 RNA E-RTC complex with RMP-nsp9 and GMPPNP
Release date: Feb. 28, 2024
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 8gwk
Q-score: 0.423

Yan L, Huang Y, Ge J, Liu Z, Lu P, Huang B, Gao S, Wang J, Tan L, Ye S, Yu F, Lan W, Xu S, Zhou F, Shi L, Guddat LW, Gao Y, Rao Z, Lou Z

Cell (2022) 185 pp. 4347-4360.e17 [ Pubmed: 36335936 DOI: doi:10.1016/j.cell.2022.09.037 ]

EMD-34316
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SARS-CoV-2 E-RTC bound with MMP-nsp9 and GMPPNP
Release date: Feb. 28, 2024
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 8gwm
Q-score: 0.41

Yan L, Huang Y, Ge J, Liu Z, Lu P, Huang B, Gao S, Wang J, Tan L, Ye S, Yu F, Lan W, Xu S, Zhou F, Shi L, Guddat LW, Gao Y, Rao Z, Lou Z

Cell (2022) 185 pp. 4347-4360.e17 [ Pubmed: 36335936 DOI: doi:10.1016/j.cell.2022.09.037 ]

EMD-34302
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A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
Release date: Oct. 25, 2023
Resolution: 3.31 Å
EM Method: Single-particle
Fitted PDBs: 8gw1
Q-score: 0.332

Yan L, Huang Y, Ge J, Liu Z, Lu P, Huang B, Gao S, Wang J, Tan L, Ye S, Yu F, Lan W, Xu S, Zhou F, Shi L, Guddat LW, Gao Y, Rao Z, Lou Z

Cell (2022) 185 pp. 4347-4360.e17 [ Pubmed: 36335936 DOI: doi:10.1016/j.cell.2022.09.037 ]

EMD-33241
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Cryo-EM Structure of Human Niacin Receptor HCA2-Gi protein complex
Release date: Feb. 22, 2023
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7xk2
Q-score: 0.471

Yang Y, Kang HJ, Gao R, Wang J, Han GW, DiBerto JF, Wu L, Tong J, Qu L, Wu Y, Pileski R, Li X, Zhang XC, Zhao S, Kenakin T, Wang Q, Stevens RC, Peng W, Roth BL, Rao Z, Liu ZJ

Nat Commun (2023) 14 pp. 1692-1692 [ DOI: doi:10.1038/s41467-023-37177-6 Pubmed: 36973264 ]

EMD-33986
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Cryo-EM structure of RNA polymerase in complex with P protein tetramer of Newcastle disease virus
Release date: Feb. 15, 2023
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7yot
Q-score: 0.568

Cong J, Feng X, Kang H, Fu W, Wang L, Wang C, Li X, Chen Y, Rao Z

Nat Commun (2023) 14 pp. 1324-1324 [ DOI: doi:10.1038/s41467-023-37012-y Pubmed: 36898997 ]

Sort by: Download
Showing 1 - 10 of 58. Page 1 of 6
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [58]

Current status

  • REL [58]

Sample type

  • Protein [57]
  • Complex [53]
  • Ligand [39]
  • RNA [20]
  • Virus [5]

Organism

  • Severe acute respiratory syndrome coronavirus [22]
  • Mycolicibacterium smegmatis [16]
  • Mycolicibacterium smegmatis [8]
  • Mycobacterium tuberculosis [8]
  • Foot-and-mouth disease virus [5]
  • Hepatitis b virus [5]
  • Avian orthoavulavirus 1 [3]
  • Mycolicibacterium smegmatis [2]
  • Bacteroides xylanisolvens [1]
  • Synthetic construct [1]
  • Homo sapiens [1]

EM Method

  • Single-particle [58]

Resolution

  • ≥ 2Å and < 3Å [22]
  • ≥ 3Å and < 4Å [32]
  • ≥ 4Å and < 5Å [1]
  • ≥ 6Å and < 8Å [1]
  • ≥ 8Å and < 12Å [2]

Model molecular weight

  • 50-100 kDa [2]
  • 100-250 kDa [17]
  • 250-500 kDa [25]
  • 500-1000 kDa [5]
  • 1-2 MDa [1]
  • 2-5 MDa [1]

Release Date

  • 2024 [7]
  • 2023 [11]
  • 2022 [6]
  • 2021 [13]
  • 2020 [20]
  • 2018 [1]

Author by name

  • Rao Z [58]
  • Gao Y [49]
  • Guddat LW [48]
  • Wang Q [34]
  • Yang X [32]
  • Lou Z [27]
  • Liu Z [24]
  • Ge J [21]
  • Yan L [21]
  • Yang H [21]
  • Huang Y [19]
  • Rao ZH [19]
  • Liu F [18]
  • Xu W [16]
  • Zhang Y [16]
  • Zhang B [15]
  • Gao S [13]
  • Gong H [12]
  • Mu A [12]
  • Tang Y [12]
  • Wang T [12]
  • Hu T [11]
  • Ji W [11]
  • Wang H [11]
  • Wang J [11]
  • Wang W [11]
  • Zhou X [11]
  • Huang B [10]
  • Lan W [10]
  • Li X [10]
  • Lu P [10]
  • Shi L [10]
  • Tan L [10]
  • Xu S [10]
  • Ye S [10]
  • Yu F [10]
  • Zhou F [10]
  • Zhu Y [10]
  • Li J [9]
  • Liang J [9]
  • Lou ZY [9]
  • Yan LM [9]
  • Zhou S [9]
  • Gao R [8]
  • Huang YC [8]
  • Lai Y [8]
  • Zhang L [8]
  • Zhao Y [8]
  • Cao L [7]
  • Zheng L [7]
  • Batt SM [6]
  • Besra GS [6]
  • Bi L [6]
  • Gurcha SS [6]
  • Sun Q [6]
  • Veerapen N [6]
  • Zhang X [6]
  • Zhao W [6]
  • Zhu C [6]
  • Du Z [5]
  • Fang X [5]
  • Fu S [5]
  • Gong P [5]
  • Hu Z [5]
  • Jiang B [5]
  • Li M [5]
  • Li S [5]
  • Liu Q [5]
  • Liu ZY [5]
  • Sun S [5]
  • Wang M [5]
  • Wang P [5]
  • Wang X [5]
  • Wu J [5]
  • Wu L [5]
  • Xiong Z [5]
  • Zhang W [5]
  • Bai F [4]
  • Chen Y [4]
  • Gao H [4]
  • Gao RG [4]
  • Gong HR [4]
  • Qin L [4]
  • Ran Y [4]
  • Ren P [4]
  • Shui G [4]
  • Tian C [4]
  • Wang Y [4]
  • Wu C [4]
  • Wu F [4]
  • Yang Y [4]
  • Yu L [4]
  • Zhang Q [4]
  • Chen H [3]
  • Cong J [3]
  • Feng X [3]
  • Fu W [3]
  • Jingyuan C [3]
  • Kang H [3]
  • Lam SM [3]

Author by ORCID

  • Rao Z [29]
  • Gao Y [24]
  • Guddat LW [24]
  • Wang Q [20]
  • Xu W [16]
  • Zhang B [14]
  • Yang H [14]
  • Liu F [14]
  • Ji W [11]
  • Lu P [10]
  • Gong H [10]
  • Hu T [10]
  • Tang Y [9]
  • Yang X [9]
  • Lou Z [9]
  • Yang X [9]
  • Lai Y [8]
  • Zhou X [8]
  • Liang J [8]
  • Mu A [8]
  • Wang T [7]
  • Li J [7]
  • Zhao Y [6]
  • Batt SM [6]
  • Veerapen N [6]
  • Gao R [5]
  • Cao L [5]
  • Wang X [5]
  • Fu S [5]
  • Hu Z [5]
  • Wang P [5]
  • Sun S [4]
  • Ren P [4]
  • Qin L [4]
  • Wu C [4]
  • Ran Y [4]
  • Wu L [4]
  • Xiong Z [4]
  • Zhang L [4]
  • Wang Y [4]
  • Besra GS [4]
  • Zhang Q [4]
  • Bai F [4]
  • Wu F [4]
  • Rao Z [3]
  • Zhou S [3]
  • Chen Y [3]
  • Ran T [3]
  • Shui G [3]
  • Chen H [3]
  • Gao Y [3]
  • Sun Q [2]
  • Wang H [2]
  • Lam SM [2]
  • Gong H [2]
  • Yu L [2]
  • Wang Q [2]
  • Yan L [2]
  • Tian C [2]
  • Yu L [2]
  • Zhao S [1]
  • Zhang XC [1]
  • Wu Y [1]
  • Liu ZJ [1]
  • Robinson CV [1]
  • Shui G [1]
  • Yang C [1]
  • Sun F [1]
  • Roth BL [1]
  • Peng W [1]
  • Guddat LW [1]
  • Tian C [1]
  • Xu A [1]
  • Wang S [1]
  • Wong LL [1]
  • Yang Y [1]
  • Wang Q [1]
  • Wong LL [1]

Journal

  • CELL [17]
  • SCIENCE [12]
  • NAT COMMUN [9]
  • PROTEIN CELL [6]
  • PNAS [5]
  • SCI ADV [4]
  • ELIFE [3]
  • CELL REP [1]
  • STRUCTURE [1]

Software

  • CRYOSPARC [19]
  • RELION [8]
  • GCTF [2]

Microscope

  • FEI TITAN KRIOS [50]
  • FEI TITAN [5]
  • FEI POLARA 300 [1]
  • FEI TALOS ARCTICA [1]
  • FEI TECNAI ARCTICA [1]

Electron Source

  • FIELD EMISSION GUN [54]
  • OTHER [3]
  • TUNGSTEN HAIRPIN [1]

Film or detector model

  • GATAN K2 QUANTUM 4K X 4K [28]
  • GATAN K3 6K X 4K [20]
  • GATAN K2 SUMMIT 4K X 4K [9]
  • GATAN K3 BIOQUANTUM 6K X 4K [1]

External links

  • UniProt [56]
  • PDBe-Kb [53]
  • PDB [51]
  • InterPro [48]
  • Pfam [48]
  • Gene Ontology [46]
  • ChEBI [36]
  • ChEMBL [34]
  • DrugBank [34]
  • AlphaFold DB [24]
  • Complex Portal [22]
  • SCOP2 [4]