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grant_code:"182880"

Filter By

Current Database

  • EMDB [14]

Current status

  • REL [14]

Sample type

  • Complex [14]
  • Protein [9]
  • Ligand [8]
  • RNA [5]

Organism

  • Homo sapiens [11]
  • Trypanosoma brucei [2]
  • Caenorhabditis elegans [1]

EM Method

  • Single-particle [14]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [12]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [2]
  • 1-2 MDa [3]
  • 2-5 MDa [2]

Release Date

  • 2024 [4]
  • 2022 [2]
  • 2021 [8]

Author by name

  • Ban N [10]
  • Leibundgut M [10]
  • Lenarcic T [10]
  • Saurer M [10]
  • Filipovska A [8]
  • Jaskolowski M [8]
  • Lee RG [8]
  • Rackham O [8]
  • Scaiola A [8]
  • Schoenhut T [8]
  • Schonhut T [8]
  • Jonas S [3]
  • Qiu C [3]
  • Sabath K [3]
  • Boehringer D [2]
  • Calderaro S [2]
  • Flugel T [2]
  • Horn EK [2]
  • Niemann M [2]
  • Prange C [2]
  • Ramrath DJF [2]
  • Schneider A [2]
  • Cavadini S [1]
  • Gaidatzis D [1]
  • Grosshans H [1]
  • Gudipati RK [1]
  • Hess D [1]
  • Kempf G [1]
  • Muehlhaeusser S [1]
  • Seebacher J [1]
  • Soneson C [1]

Author by ORCID

  • Saurer M [10]
  • Jaskolowski M [8]
  • Lee RG [8]
  • Rackham O [8]
  • Filipovska A [8]
  • Ban N [8]
  • Scaiola A [8]
  • Schneider A [2]
  • Boehringer D [2]
  • Prange C [2]
  • Kempf G [1]
  • Hess D [1]
  • Gudipati RK [1]
  • Seebacher J [1]
  • Grosshans H [1]
  • Soneson C [1]

Journal

  • NAT COMMUN [8]
  • MOL CELL [3]
  • PNAS [2]
  • MOL.SYST.BIOL. [1]

Software

  • CRYOSPARC [9]
  • RELION [3]

Microscope

  • FEI TITAN KRIOS [14]

Electron Source

  • FIELD EMISSION GUN [14]

Film or detector model

  • GATAN K3 6K X 4K [7]
  • FEI FALCON III 4K X 4K [3]
  • GATAN K3 BIOQUANTUM 6K X 4K [3]
  • FEI FALCON IV 4K X 4K [1]

External links

  • AlphaFold DB [9]
  • Gene Ontology [9]
  • InterPro [9]
  • PDB [9]
  • PDBe-Kb [9]
  • Pfam [9]
  • UniProt [9]
  • ChEBI [8]
  • ChEMBL [8]
  • DrugBank [8]
  • Complex Portal [3]
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Showing 1 - 10 of 14. Page 1 of 2
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EMD-18833
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3D View
INTS9-INTS11-BRAT1-WDR73 complex
Release date: July 31, 2024
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8r22
Q-score: 0.464

Sabath K, Qiu C, Jonas S

Mol Cell (2024) 84 pp. 2882-2899.e10 [ Pubmed: 39032489 DOI: doi:10.1016/j.molcel.2024.06.032 ]

EMD-18834
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3D View
INTS9-INTS11-BRAT1 complex
Release date: July 31, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8r23
Q-score: 0.535

Sabath K, Qiu C, Jonas S

Mol Cell (2024) 84 pp. 2882-2899.e10 [ Pubmed: 39032489 DOI: doi:10.1016/j.molcel.2024.06.032 ]

EMD-18839
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3D View
Integrator cleavage module assembly intermediate
Release date: July 31, 2024
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8r2d
Q-score: 0.389

Sabath K, Qiu C, Jonas S

Mol Cell (2024) 84 pp. 2882-2899.e10 [ Pubmed: 39032489 DOI: doi:10.1016/j.molcel.2024.06.032 ]

EMD-17582
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3D View
Cryo-EM structure of Caenorhabditis elegans DPF-3 apo
Release date: June 26, 2024
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 8pba
Q-score: 0.526

Gudipati RK, Gaidatzis D, Seebacher J, Muehlhaeusser S, Kempf G, Cavadini S, Hess D, Soneson C, Grosshans H

Mol.Syst.Biol. (2024) 20 pp. 1303-1328 [ DOI: doi:10.1038/s44320-024-00071-4 Pubmed: 39468329 ]

EMD-13661
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Late assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
Release date: May 4, 2022
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7pub
Q-score: 0.436

Lenarcic T, Niemann M, Ramrath DJF, Calderaro S, Flugel T, Saurer M, Leibundgut M, Boehringer D, Prange C, Horn EK, Schneider A, Ban N

PNAS (2022) 119 [ DOI: doi:10.1073/pnas.2114710118 Pubmed: 35042777 ]

EMD-13660
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Middle assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
Release date: March 2, 2022
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7pua
Q-score: 0.436

Lenarcic T, Niemann M, Ramrath DJF, Calderaro S, Flugel T, Saurer M, Leibundgut M, Boehringer D, Prange C, Horn EK, Schneider A, Ban N

PNAS (2022) 119 [ DOI: doi:10.1073/pnas.2114710118 Pubmed: 35042777 ]

EMD-12845
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3D View
State A of the human mitoribosomal large subunit assembly intermediate
Release date: June 23, 2021
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7odr
Q-score: 0.473

Lenarcic T, Jaskolowski M, Leibundgut M, Scaiola A, Schonhut T, Saurer M, Lee RG, Rackham O, Filipovska A, Ban N

Nat Commun (2021) 12 pp. 3671-3671 [ Pubmed: 34135320 DOI: doi:10.1038/s41467-021-23811-8 ]

EMD-12846
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3D View
State B of the human mitoribosomal large subunit assembly intermediate
Release date: June 23, 2021
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7ods
Q-score: 0.425

Lenarcic T, Jaskolowski M, Leibundgut M, Scaiola A, Schonhut T, Saurer M, Lee RG, Rackham O, Filipovska A, Ban N

Nat Commun (2021) 12 pp. 3671-3671 [ Pubmed: 34135320 DOI: doi:10.1038/s41467-021-23811-8 ]

EMD-12847
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3D View
State C of the human mitoribosomal large subunit assembly intermediate
Release date: June 23, 2021
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7odt
Q-score: 0.43

Lenarcic T, Jaskolowski M, Leibundgut M, Scaiola A, Schonhut T, Saurer M, Lee RG, Rackham O, Filipovska A, Ban N

Nat Commun (2021) 12 pp. 3671-3671 [ Pubmed: 34135320 DOI: doi:10.1038/s41467-021-23811-8 ]

EMD-12848
Download Map
3D View
State A0 of the human mitoribosomal large subunit assembly intermediate
Release date: June 23, 2021
Resolution: 3.1 Å
EM Method: Single-particle

Lenarcic T, Jaskolowski M, Leibundgut M, Scaiola A, Schonhut T, Saurer M, Lee RG, Rackham O, Filipovska A, Ban N

Nat Commun (2021) 12 pp. 3671-3671 [ Pubmed: 34135320 DOI: doi:10.1038/s41467-021-23811-8 ]

Sort by: Download
Showing 1 - 10 of 14. Page 1 of 2
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [14]

Current status

  • REL [14]

Sample type

  • Complex [14]
  • Protein [9]
  • Ligand [8]
  • RNA [5]

Organism

  • Homo sapiens [11]
  • Trypanosoma brucei [2]
  • Caenorhabditis elegans [1]

EM Method

  • Single-particle [14]

Resolution

  • ≥ 2Å and < 3Å [2]
  • ≥ 3Å and < 4Å [12]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [2]
  • 1-2 MDa [3]
  • 2-5 MDa [2]

Release Date

  • 2024 [4]
  • 2022 [2]
  • 2021 [8]

Author by name

  • Ban N [10]
  • Leibundgut M [10]
  • Lenarcic T [10]
  • Saurer M [10]
  • Filipovska A [8]
  • Jaskolowski M [8]
  • Lee RG [8]
  • Rackham O [8]
  • Scaiola A [8]
  • Schoenhut T [8]
  • Schonhut T [8]
  • Jonas S [3]
  • Qiu C [3]
  • Sabath K [3]
  • Boehringer D [2]
  • Calderaro S [2]
  • Flugel T [2]
  • Horn EK [2]
  • Niemann M [2]
  • Prange C [2]
  • Ramrath DJF [2]
  • Schneider A [2]
  • Cavadini S [1]
  • Gaidatzis D [1]
  • Grosshans H [1]
  • Gudipati RK [1]
  • Hess D [1]
  • Kempf G [1]
  • Muehlhaeusser S [1]
  • Seebacher J [1]
  • Soneson C [1]

Author by ORCID

  • Saurer M [10]
  • Jaskolowski M [8]
  • Lee RG [8]
  • Rackham O [8]
  • Filipovska A [8]
  • Ban N [8]
  • Scaiola A [8]
  • Schneider A [2]
  • Boehringer D [2]
  • Prange C [2]
  • Kempf G [1]
  • Hess D [1]
  • Gudipati RK [1]
  • Seebacher J [1]
  • Grosshans H [1]
  • Soneson C [1]

Journal

  • NAT COMMUN [8]
  • MOL CELL [3]
  • PNAS [2]
  • MOL.SYST.BIOL. [1]

Software

  • CRYOSPARC [9]
  • RELION [3]

Microscope

  • FEI TITAN KRIOS [14]

Electron Source

  • FIELD EMISSION GUN [14]

Film or detector model

  • GATAN K3 6K X 4K [7]
  • FEI FALCON III 4K X 4K [3]
  • GATAN K3 BIOQUANTUM 6K X 4K [3]
  • FEI FALCON IV 4K X 4K [1]

External links

  • AlphaFold DB [9]
  • Gene Ontology [9]
  • InterPro [9]
  • PDB [9]
  • PDBe-Kb [9]
  • Pfam [9]
  • UniProt [9]
  • ChEBI [8]
  • ChEMBL [8]
  • DrugBank [8]
  • Complex Portal [3]