Happy Holidays and New year from the EMDB! Please be advised that the EMDB team will be operating at reduced capacity between December 15th - January 12th. With this in mind we would ask that you be prepared for longer reply times through both our helpdesk system and the OneDep deposition system. well done on a productive 2025, wishing you all the best and we will see you in 2026!
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Filter By
Current Database
- EMDB [4492]
Current status
- REL [4492]
Sample type
- Complex [3544]
- Protein [3408]
- Ligand [1516]
- Cellular component [530]
- RNA [214]
- Virus [209]
- DNA [189]
- Tissue [173]
- Cell [108]
- Other [34]
Organism
- Homo sapiens [1861]
- Mus musculus [323]
- Synthetic construct [204]
- Severe acute respiratory syndrome coronavirus [190]
- Escherichia coli [145]
- Human immunodeficiency virus 1 [135]
- Sus scrofa [133]
- Saccharomyces cerevisiae [91]
- Oryctolagus cuniculus [73]
- Escherichia coli [72]
- Rattus norvegicus [71]
- Bos taurus [69]
- Gallus gallus [68]
- Drosophila melanogaster [58]
- Polytomella sp. pringsheim 198.80 [54]
- Synechocystis sp. pcc 6803 [52]
- Chlamydomonas reinhardtii [48]
- Arabidopsis thaliana [46]
- Saccharomyces cerevisiae [45]
- Macaca mulatta [42]
- Torpedo marmorata [38]
- Dictyostelium discoideum [30]
- Xenopus laevis [28]
- (no species) [28]
- Amanita phalloides [25]
- Influenza a virus [24]
- Glycine max [24]
- Potato virus y [22]
- Lama glama [22]
- Plasmodium falciparum [21]
- Campylobacter jejuni [20]
- Thermoplasma acidophilum [19]
- Pseudomonas aeruginosa [19]
- Streptomyces coelicolor [18]
- Bacillus subtilis [18]
- Danio rerio [16]
- Mycobacterium tuberculosis [15]
- Sulfolobus acidocaldarius [14]
- Vibrio cholerae [14]
- Monkeypox virus [13]
- Acetivibrio thermocellus [13]
- Plasmodium falciparum [13]
- Pseudomonas phage phi6 [12]
- Measles morbillivirus [12]
- Sulfolobus monocaudavirus smv1 [12]
- Vigna radiata [12]
- Alphabaculovirus aucalifornicae [12]
- Spodoptera frugiperda [12]
- Salmonella enterica [12]
- Rift valley fever phlebovirus [11]
- Agrobacterium phage milano [11]
- Nostoc punctiforme [11]
- Betacoronavirus 1 [11]
- Escherichia coli [11]
- Chaetomium thermophilum [11]
- Streptococcus pneumoniae [10]
- Chikungunya virus [10]
- (no species) [10]
- Helicoverpa armigera nucleopolyhedrovirus [10]
- Sus scrofa [10]
- Human herpesvirus 1 [9]
- Foot-and-mouth disease virus [9]
- Tobacco mosaic virus [9]
- Staphylococcus aureus [9]
- Pseudomonas aeruginosa [9]
- Rauchvirus bpp1 [9]
- Pseudomonas fluorescens [9]
- Tetrahymena thermophila [9]
- (no species) [9]
- Tobacco mosaic virus [8]
- Thermus thermophilus [8]
- Banna virus [8]
- Leptospira biflexa [7]
- Sulfolobus acidocaldarius [7]
- Candidatus scalindua brodae [7]
- Bacillus sp. hmf5848 [7]
- Methylorubrum extorquens [7]
- Autographa californica multiple nucleopolyhedrovirus [7]
- Trypanosoma cruzi [7]
- Cryptosporidium parvum [7]
- Porphyromonas gingivalis [7]
- Candida albicans [7]
- Caenorhabditis elegans [7]
- Salmonella enterica [7]
- Cereibacter sphaeroides [6]
- Vitiosangium sp. (strain gdmcc 1.1324) [6]
- Deinococcus radiodurans [6]
- Neospora caninum [6]
- Geobacter sulfurreducens [6]
- Oryza sativa [6]
- Stigmatella aurantiaca [6]
- Neisseria lactamica [6]
- Hepatitis b virus [6]
- Escherichia coli [6]
- Klebsiella pneumoniae [6]
- Toxoplasma gondii [6]
- Neisseria meningitidis [6]
- Thermococcus kodakarensis [6]
- Ranoidea citropa [6]
- Salmonella enterica [6]
EM Method
- Single-particle [2171]
- Helical reconstruction [1947]
- Subtomogram averaging [374]
Resolution
- < 2Å [29]
- ≥ 2Å and < 3Å [869]
- ≥ 3Å and < 4Å [2037]
- ≥ 4Å and < 5Å [459]
- ≥ 5Å and < 6Å [99]
- ≥ 6Å and < 8Å [214]
- ≥ 8Å and < 12Å [170]
- ≥ 12Å and < 16Å [76]
- ≥ 16Å and < 20Å [102]
- ≥ 20Å and < 30Å [205]
- ≥ 30Å [231]
Model molecular weight
- 0-50 kDa [210]
- 50-100 kDa [338]
- 100-250 kDa [980]
- 250-500 kDa [758]
- 500-1000 kDa [394]
- 1-2 MDa [165]
- 2-5 MDa [124]
- 5-10 MDa [29]
- > 10 MDa [14]
Release Date
- 2025 [846]
- 2024 [815]
- 2023 [740]
- 2022 [588]
- 2021 [447]
- 2020 [373]
- 2019 [244]
- 2018 [199]
- 2017 [156]
- 2016 [84]
Author by name
- Li D [256]
- Scheres SHW [214]
- Goedert M [197]
- Murzin AG [191]
- Egelman EH [168]
- Wang F [160]
- Liu C [157]
- Zhang X [148]
- Lovestam S [134]
- Kotecha A [121]
- Sun Y [114]
- Ghetti B [108]
- Yang X [107]
- Li H [106]
- Liu J [102]
- Kwong PD [98]
- Wang Y [96]
- Li Y [95]
- Liu S [93]
- Yang Y [92]
- Wu J [91]
- Zhang Y [91]
- Li X [90]
- Liu H [87]
- Zhu Y [87]
- Zhang Z [86]
- Garringer HJ [84]
- Zhang B [81]
- Vidal R [80]
- Yu X [79]
- Zhou L [78]
- Sachse C [77]
- Hu J [76]
- Wu JP [76]
- Feng S [75]
- Gui M [75]
- Haynes BF [75]
- Zhang J [75]
- Dong Y [74]
- Huang P [74]
- Liu M [74]
- Pan Y [74]
- Sun R [74]
- Xiao Z [74]
- Zheng B [74]
- Zhou LN [74]
- Wang J [72]
- Kuhlbrandt W [71]
- Liu Y [71]
- Tao YQ [71]
- Wang L [70]
- Ward AB [70]
- Mclaughlin SH [64]
- Saphire EO [64]
- Wang C [64]
- Zhou T [64]
- Acharya P [63]
- Freund SMV [63]
- Hastie KM [62]
- Kimanius D [62]
- Mills DJ [62]
- Wagstaff JL [62]
- Edwards RJ [60]
- Janowska K [60]
- Mansouri K [60]
- Shi Y [60]
- Wang S [60]
- Xu Y [60]
- Kreutzberger MAB [59]
- Parks R [58]
- Stalls V [58]
- Gobeil S [57]
- Hasegawa M [57]
- Jiang W [57]
- Manne K [56]
- Murphy BJ [56]
- Saunders KO [56]
- Gobeil SM [55]
- Gorman J [55]
- Yildiz O [55]
- Klusch N [54]
- Schendel SL [54]
- Frost A [53]
- Junglas B [53]
- Langer J [53]
- Li K [53]
- Olia AS [53]
- Beck M [52]
- Buck T [52]
- Henderson R [52]
- Krupovic M [52]
- Sawaya MR [52]
- Schneider D [52]
- Boyer DR [51]
- Dennison SM [51]
- Schroder GF [51]
- Sonani RR [51]
- Bedinger D [50]
- Hui S [50]
- Hummer G [50]
Author by ORCID
- Scheres SHW [166]
- Goedert M [143]
- Kotecha A [121]
- Wang F [114]
- Egelman EH [99]
- Sachse C [76]
- Garringer HJ [76]
- Vidal R [76]
- Zhou L [75]
- Gui M [75]
- Kuhlbrandt W [71]
- Kwong PD [70]
- Mclaughlin SH [64]
- Freund SMV [63]
- Li D [62]
- Mills DJ [62]
- Ghetti B [61]
- Murphy BJ [56]
- Klusch N [54]
- Junglas B [53]
- Langer J [53]
- Frost A [52]
- Edwards RJ [52]
- Schneider D [52]
- Gobeil SM [51]
- Hummer G [50]
- Hui S [50]
- Liu C [49]
- Sawaya MR [48]
- Gorman J [47]
- Li X [44]
- Benoit MPMH [43]
- Schroder GF [42]
- Raunser S [41]
- Sosa H [40]
- Hastie KM [40]
- Asenjo AB [40]
- Acharya P [38]
- Yu X [38]
- Eisenberg DS [38]
- Krupovic M [37]
- Stalls V [35]
- Radford SE [35]
- Manne K [35]
- Kikkawa M [34]
- Moss 3Rd Fr [34]
- Zyla D [33]
- Zhang W [33]
- Yang Y [33]
- Hoffmann PC [33]
- Yin J [32]
- Parekh D [32]
- Ge P [32]
- Kosinski J [32]
- Zhou T [32]
- Buck T [32]
- Schendel SL [32]
- Sonani RR [32]
- Zandonatti M [32]
- Ryskeldi-falcon B [32]
- Enriquez A [32]
- Li H [32]
- Saunders KO [31]
- Arseni D [31]
- Ranson NA [31]
- Van Knippenberg B [31]
- Haynes BF [31]
- Houdusse A [31]
- Horn GQ [31]
- Bedinger D [30]
- Mcguire AT [30]
- Ingraham J [30]
- Grigoryan G [30]
- Abraha M [30]
- Sanders RW [30]
- Kim M [30]
- Germann T [30]
- Saphire EO [30]
- Yuan TZ [30]
- Nogales E [30]
- Ali H [30]
- Seo J [30]
- Tan Y [30]
- Sajadi MM [30]
- Glanville J [30]
- Sato AK [30]
- Ho DD [30]
- Lu Y [30]
- Rayaprolu V [30]
- Leung CL [30]
- Snitselaar JL [30]
- Boyer DR [30]
- Feeney E [30]
- Peters B [30]
- Rikhtegaran Tehrani Z [30]
- Aracic S [30]
- Shaffer K [30]
- Tomaras GD [30]
- Hariharan C [30]
- Rabbitts TH [30]
Journal
- NAT COMMUN [780]
- TO BE PUBLISHED [466]
- PNAS [289]
- NATURE [269]
- CELL [264]
- BIORXIV [230]
- ELIFE [227]
- NAT STRUCT MOL BIOL [213]
- SCIENCE [211]
- MOL CELL [174]
- STRUCTURE [141]
- SCI ADV [135]
- CELL REP [107]
- J MOL BIOL [75]
- NUCLEIC ACIDS RES [71]
- COMMUN BIOL [69]
- NAT MICROBIOL [53]
- ACTA NEUROPATHOL [51]
- J BIOL CHEM [44]
- PLOS PATHOG [36]
- EMBO J [33]
- J AM CHEM SOC [32]
- J VIROL [30]
- MBIO [28]
- PLOS BIOL [26]
- DEV CELL [24]
- COMMUN CHEM [23]
- NAT PLANTS [21]
- BLOOD [19]
- CELL DISCOV [17]
- J CELL BIOL [17]
- J EXP MED [17]
- CELL RES [16]
- CURR BIOL [15]
- J STRUCT BIOL [15]
- NAT CHEM BIOL [15]
- EMBO REP [14]
- J GEN VIROL [14]
- ACTA CRYSTALLOGR D STRUCT BIOL [13]
- ISCIENCE [13]
- MOL BIOL CELL [13]
- PROTEIN SCI [13]
- ACS NANO [12]
- SCI REP [12]
- CELL HOST MICROBE [11]
- SCI TRANSL MED [11]
- VIRUSES [11]
- NAT CHEM [10]
- NAT METHODS [10]
- NAT NEUROSCI [10]
- ADV SCI [9]
- FEBS OPEN BIO [9]
- INT J BIOL MACROMOL [9]
- NAT NANOTECHNOL [9]
- MATTER [8]
- NANO LETTERS [8]
- NEURON [8]
- J.THROMB.HAEMOST. [7]
- PLOS ONE [7]
- ANTIOXID REDOX SIGNAL [6]
- CHEM [6]
- NAT CELL BIOL [6]
- RES SQ [6]
- CHEM SCI [5]
- CYTOSKELETON [5]
- ENVIRON SCI TECHNOL. [5]
- FEBS LETT [5]
- FRONT MICROBIOL [5]
- J GEN PHYSIOL [5]
- ACS CHEM BIOL [4]
- ACS CHEM NEUROSCI [4]
- ANGEW CHEM INT ED ENGL [4]
- CELL DEATH DIFFER. [4]
- FRONT PLANT SCI [4]
- INT J MOL SCI [4]
- MSPHERE [4]
- PNAS NEXUS [4]
- SCI SIGNAL [4]
- ACS MACRO LETT [3]
- ACTA PHARMACOL.SIN. [3]
- BIOMOLECULES [3]
- CELL REP PHYS SCI [3]
- CHEMISTRY [3]
- FARADAY DISC.CHEM.SOC [3]
- FRONT IMMUNOL [3]
- IMMUNITY [3]
- J BACTERIOL [3]
- LIFE SCI ALLIANCE [3]
- MOL CELLS [3]
- MOL MICROBIOL [3]
- OPEN BIOL [3]
- PLOS GENET [3]
- PROTEIN CELL [3]
- ACS APPL MATER INTERFACES [2]
- ACS INFECT DIS. [2]
- ADV MATER [2]
- AM J KIDNEY DIS [2]
- ANAL CHEM [2]
- ANNU REV BIOPHYS [2]
- BIOCHEM BIOPHYS REP [2]
Software
- RELION [1292]
- CRYOSPARC [710]
- CTFFIND [176]
- GCTF [96]
- PEET [86]
- DYNAMO [79]
- CRYOLO [76]
- SPIDER [75]
- IMOD [72]
- EMAN2 [65]
- FREALIGN [63]
- EMAN [40]
- SPHIRE [40]
- CISTEM [33]
- PYTOM [20]
- CTFPHASEFLIP [16]
- AV3 [15]
- COOT [15]
- IHRSR [15]
- PHENIX [14]
- FREALIX [13]
- SPARX [12]
- APPION [10]
- ETOMO [10]
- CTFFIND3 [9]
- SPRING [9]
- TOM [9]
- UCSF CHIMERAX [9]
- NOVACTF [8]
- TOM TOOLBOX [8]
- XMIPP [8]
- NOVASTA [7]
- TOPAZ [7]
- AMIRA [6]
- AUTO3DEM [6]
- I3 [5]
- WARP [5]
- HSEARCH_LORENTZ [4]
- MATLAB [4]
- MRA/MSA [4]
- UCSF CHIMERA [3]
- AMIRAFPM [2]
- BSOFT [2]
- E2HELIXBOXER [2]
- EMAN BOXER [2]
- EMCLARITY [2]
- J3DR [2]
- JALIGN [2]
- SPARX/EMAN2 [2]
- STOPGAP [2]
- SUPER-SAMPLING SART [2]
- TOMOCTF [2]
- APPION HELIX BOXER [1]
- COW [1]
- CRYOS [1]
- CTFFIND4 [1]
- CTFTILT [1]
- E2BOXER [1]
- E2HELIXBOXER.PY [1]
- IHRSH [1]
- IMOD/PEET [1]
- MATLAB SCRIPTS [1]
- MOTIONCORR2 [1]
- PROTOMO [1]
- SCIPION [1]
- SEGREFINETHREED [1]
Microscope
- FEI TITAN KRIOS [2718]
- TFS KRIOS [744]
- FEI TALOS ARCTICA [220]
- TFS GLACIOS [196]
- FEI TITAN [120]
- FEI TECNAI F20 [91]
- FEI POLARA 300 [72]
- JEOL CRYO ARM 300 [71]
- FEI TECNAI ARCTICA [42]
- FEI TECNAI 20 [40]
- FEI TECNAI SPIRIT [38]
- FEI TECNAI 12 [37]
- FEI TECNAI F30 [25]
- JEOL 3200FSC [16]
- JEOL 2200FS [13]
- FEI MORGAGNI [10]
- TFS TALOS [8]
- JEOL 2100 [6]
- JEOL 1400 [4]
- JEOL 3100FEF [4]
- FEI TECNAI 10 [3]
- FEI/PHILIPS CM120T [3]
- JEOL 3100FFC [3]
- FEI TECNAI SPHERA [2]
- JEOL 1230 [2]
- JEOL 2100F [2]
- TFS TITAN THEMIS [2]
Electron Source
- FIELD EMISSION GUN [4337]
- LAB6 [103]
- OTHER [44]
- TUNGSTEN HAIRPIN [8]
Film or detector model
- GATAN K3 6K X 4K [1221]
- GATAN K2 SUMMIT 4K X 4K [981]
- GATAN K3 BIOQUANTUM 6K X 4K [735]
- FEI FALCON IV 4K X 4K [509]
- FEI FALCON III 4K X 4K [371]
- FEI FALCON II 4K X 4K [150]
- GATAN K2 QUANTUM 4K X 4K [137]
- GATAN K3 BIOCONTINUUM 6K X 4K [76]
- GATAN ULTRASCAN 4000 4K X 4K [65]
- OTHER [59]
- TVIPS TEMCAM-F416 4K X 4K [38]
- TFS FALCON 4I 4K X 4K [36]
- FEI CETA 4K X 4K [21]
- FEI EAGLE 2K X 2K [18]
- DIRECT ELECTRON DE-20 5K X 3K [16]
- GATAN K2 BASE 4K X 4K [15]
- FEI EAGLE 4K X 4K [9]
- DIRECT ELECTRON DE-16 4K X 4K [6]
- GATAN K2 IS 4K X 4K [6]
- FEI FALCON I 4K X 4K [5]
- GATAN ULTRASCAN 1000 2K X 2K [4]
- DIRECT ELECTRON APOLLO 4K X 4K [3]
- GATAN ORIUS SC200 2K X 2K [3]
- TVIPS TEMCAM-F816 8K X 8K [3]
- GATAN MULTISCAN [2]
- TVIPS TEMCAM-F224 2K X 2K [2]
- TVIPS TEMCAM-F415 4K X 4K [2]
- DECTRIS ELA 1K X 0.5K [1]
- DIRECT ELECTRON DE-12 4K X 3K [1]
- GATAN ORIUS SC600 2.7K X 2.7K [1]
- KODAK 4489 FILM [1]
- KODAK SO-163 FILM [1]
External links
- UniProt [3140]
- PDB [3038]
- PDBe-Kb [2803]
- AlphaFold DB [2692]
- Pfam [2434]
- InterPro [2219]
- Gene Ontology [2166]
- ChEBI [1376]
- ChEMBL [1284]
- DrugBank [1060]
- Complex Portal [609]
- EMPIAR [444]
- CATH [66]
- SCOP2 [50]
Chengdong H, Simin W, Xuan C
To Be Published
Release date: Dec. 31, 2025
Resolution: 3.38 Å
EM Method: Helical reconstruction
Fitted PDBs: 9vnk
Q-score: 0.441
Resolution: 3.38 Å
EM Method: Helical reconstruction
Fitted PDBs: 9vnk
Q-score: 0.441
Li Y, Li D, Yao Y, Liu K, Zhao Q, Zhang Y, Xu Y, Li D, Sun B, Liu C, Dai B
Nano Letters (2025) [ DOI: doi:10.1021/acs.nanolett.5c05223 Pubmed: 41420871 ]
Release date: Dec. 31, 2025
Resolution: 3.37 Å
EM Method: Helical reconstruction
Fitted PDBs: 9vnm
Q-score: 0.422
Resolution: 3.37 Å
EM Method: Helical reconstruction
Fitted PDBs: 9vnm
Q-score: 0.422
Li Y, Li D, Yao Y, Liu K, Zhao Q, Zhang Y, Xu Y, Li D, Sun B, Liu C, Dai B
Nano Letters (2025) [ DOI: doi:10.1021/acs.nanolett.5c05223 Pubmed: 41420871 ]
Release date: Dec. 31, 2025
Resolution: 2.58 Å
EM Method: Helical reconstruction
Fitted PDBs: 9vnn
Q-score: 0.558
Resolution: 2.58 Å
EM Method: Helical reconstruction
Fitted PDBs: 9vnn
Q-score: 0.558
Li Y, Li D, Yao Y, Liu K, Zhao Q, Zhang Y, Xu Y, Li D, Sun B, Liu C, Dai B
Nano Letters (2025) [ DOI: doi:10.1021/acs.nanolett.5c05223 Pubmed: 41420871 ]
Release date: Dec. 31, 2025
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 9vor
Q-score: 0.347
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 9vor
Q-score: 0.347
Laboute T, Zucca S, Sial M, Sharma M, Brunori G, Singh S, Singh A, Martemyanov K
To Be Published
Release date: Dec. 31, 2025
Resolution: 3.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 9phb
Q-score: 0.545
Resolution: 3.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 9phb
Q-score: 0.545
Mishra BP, Ve T
To Be Published
Release date: Dec. 24, 2025
Resolution: 3.79 Å
EM Method: Single-particle
Fitted PDBs: 8w1z
Q-score: 0.234
Resolution: 3.79 Å
EM Method: Single-particle
Fitted PDBs: 8w1z
Q-score: 0.234
Gong Z, Chen S, Fu Z, Kloss B, Wang C, Kim J, Clarke OB, Fan QR, Hendrickson WA
Nat Commun (2025) [ Pubmed: 41315418 DOI: doi:10.1038/s41467-025-66676-x ]
Release date: Dec. 24, 2025
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 9jel
Q-score: 0.53
Resolution: 2.98 Å
EM Method: Single-particle
Fitted PDBs: 9jel
Q-score: 0.53
Fei C, Zhang Y, Wang M, Yang Y, Shi X, Wang S, Guo H, Guo C, Liu H, Li M, Gu H, Barlow S, You W, Wang M, Marder S, Huang J
Science (2026) [ DOI: doi:10.1126/science.adz7969 ]
Release date: Dec. 24, 2025
Resolution: 3.17 Å
EM Method: Single-particle
Fitted PDBs: 9l26
Q-score: 0.477
Resolution: 3.17 Å
EM Method: Single-particle
Fitted PDBs: 9l26
Q-score: 0.477
Simin W, Chengdong H, Xuan C
To Be Published
Release date: Dec. 24, 2025
Resolution: 3.08 Å
EM Method: Helical reconstruction
Fitted PDBs: 9l2s
Q-score: 0.525
Resolution: 3.08 Å
EM Method: Helical reconstruction
Fitted PDBs: 9l2s
Q-score: 0.525
Zhang YL, Dai B
To Be Published
Filter By
Current Database
- EMDB [4492]
Current status
- REL [4492]
Sample type
- Complex [3544]
- Protein [3408]
- Ligand [1516]
- Cellular component [530]
- RNA [214]
- Virus [209]
- DNA [189]
- Tissue [173]
- Cell [108]
- Other [34]
Organism
- Homo sapiens [1861]
- Mus musculus [323]
- Synthetic construct [204]
- Severe acute respiratory syndrome coronavirus [190]
- Escherichia coli [145]
- Human immunodeficiency virus 1 [135]
- Sus scrofa [133]
- Saccharomyces cerevisiae [91]
- Oryctolagus cuniculus [73]
- Escherichia coli [72]
- Rattus norvegicus [71]
- Bos taurus [69]
- Gallus gallus [68]
- Drosophila melanogaster [58]
- Polytomella sp. pringsheim 198.80 [54]
- Synechocystis sp. pcc 6803 [52]
- Chlamydomonas reinhardtii [48]
- Arabidopsis thaliana [46]
- Saccharomyces cerevisiae [45]
- Macaca mulatta [42]
- Torpedo marmorata [38]
- Dictyostelium discoideum [30]
- Xenopus laevis [28]
- (no species) [28]
- Amanita phalloides [25]
- Influenza a virus [24]
- Glycine max [24]
- Potato virus y [22]
- Lama glama [22]
- Plasmodium falciparum [21]
- Campylobacter jejuni [20]
- Thermoplasma acidophilum [19]
- Pseudomonas aeruginosa [19]
- Streptomyces coelicolor [18]
- Bacillus subtilis [18]
- Danio rerio [16]
- Mycobacterium tuberculosis [15]
- Sulfolobus acidocaldarius [14]
- Vibrio cholerae [14]
- Monkeypox virus [13]
- Acetivibrio thermocellus [13]
- Plasmodium falciparum [13]
- Pseudomonas phage phi6 [12]
- Measles morbillivirus [12]
- Sulfolobus monocaudavirus smv1 [12]
- Vigna radiata [12]
- Alphabaculovirus aucalifornicae [12]
- Spodoptera frugiperda [12]
- Salmonella enterica [12]
- Rift valley fever phlebovirus [11]
- Agrobacterium phage milano [11]
- Nostoc punctiforme [11]
- Betacoronavirus 1 [11]
- Escherichia coli [11]
- Chaetomium thermophilum [11]
- Streptococcus pneumoniae [10]
- Chikungunya virus [10]
- (no species) [10]
- Helicoverpa armigera nucleopolyhedrovirus [10]
- Sus scrofa [10]
- Human herpesvirus 1 [9]
- Foot-and-mouth disease virus [9]
- Tobacco mosaic virus [9]
- Staphylococcus aureus [9]
- Pseudomonas aeruginosa [9]
- Rauchvirus bpp1 [9]
- Pseudomonas fluorescens [9]
- Tetrahymena thermophila [9]
- (no species) [9]
- Tobacco mosaic virus [8]
- Thermus thermophilus [8]
- Banna virus [8]
- Leptospira biflexa [7]
- Sulfolobus acidocaldarius [7]
- Candidatus scalindua brodae [7]
- Bacillus sp. hmf5848 [7]
- Methylorubrum extorquens [7]
- Autographa californica multiple nucleopolyhedrovirus [7]
- Trypanosoma cruzi [7]
- Cryptosporidium parvum [7]
- Porphyromonas gingivalis [7]
- Candida albicans [7]
- Caenorhabditis elegans [7]
- Salmonella enterica [7]
- Cereibacter sphaeroides [6]
- Vitiosangium sp. (strain gdmcc 1.1324) [6]
- Deinococcus radiodurans [6]
- Neospora caninum [6]
- Geobacter sulfurreducens [6]
- Oryza sativa [6]
- Stigmatella aurantiaca [6]
- Neisseria lactamica [6]
- Hepatitis b virus [6]
- Escherichia coli [6]
- Klebsiella pneumoniae [6]
- Toxoplasma gondii [6]
- Neisseria meningitidis [6]
- Thermococcus kodakarensis [6]
- Ranoidea citropa [6]
- Salmonella enterica [6]
EM Method
- Single-particle [2171]
- Helical reconstruction [1947]
- Subtomogram averaging [374]
Resolution
- < 2Å [29]
- ≥ 2Å and < 3Å [869]
- ≥ 3Å and < 4Å [2037]
- ≥ 4Å and < 5Å [459]
- ≥ 5Å and < 6Å [99]
- ≥ 6Å and < 8Å [214]
- ≥ 8Å and < 12Å [170]
- ≥ 12Å and < 16Å [76]
- ≥ 16Å and < 20Å [102]
- ≥ 20Å and < 30Å [205]
- ≥ 30Å [231]
Model molecular weight
- 0-50 kDa [210]
- 50-100 kDa [338]
- 100-250 kDa [980]
- 250-500 kDa [758]
- 500-1000 kDa [394]
- 1-2 MDa [165]
- 2-5 MDa [124]
- 5-10 MDa [29]
- > 10 MDa [14]
Release Date
- 2025 [846]
- 2024 [815]
- 2023 [740]
- 2022 [588]
- 2021 [447]
- 2020 [373]
- 2019 [244]
- 2018 [199]
- 2017 [156]
- 2016 [84]
Author by name
- Li D [256]
- Scheres SHW [214]
- Goedert M [197]
- Murzin AG [191]
- Egelman EH [168]
- Wang F [160]
- Liu C [157]
- Zhang X [148]
- Lovestam S [134]
- Kotecha A [121]
- Sun Y [114]
- Ghetti B [108]
- Yang X [107]
- Li H [106]
- Liu J [102]
- Kwong PD [98]
- Wang Y [96]
- Li Y [95]
- Liu S [93]
- Yang Y [92]
- Wu J [91]
- Zhang Y [91]
- Li X [90]
- Liu H [87]
- Zhu Y [87]
- Zhang Z [86]
- Garringer HJ [84]
- Zhang B [81]
- Vidal R [80]
- Yu X [79]
- Zhou L [78]
- Sachse C [77]
- Hu J [76]
- Wu JP [76]
- Feng S [75]
- Gui M [75]
- Haynes BF [75]
- Zhang J [75]
- Dong Y [74]
- Huang P [74]
- Liu M [74]
- Pan Y [74]
- Sun R [74]
- Xiao Z [74]
- Zheng B [74]
- Zhou LN [74]
- Wang J [72]
- Kuhlbrandt W [71]
- Liu Y [71]
- Tao YQ [71]
- Wang L [70]
- Ward AB [70]
- Mclaughlin SH [64]
- Saphire EO [64]
- Wang C [64]
- Zhou T [64]
- Acharya P [63]
- Freund SMV [63]
- Hastie KM [62]
- Kimanius D [62]
- Mills DJ [62]
- Wagstaff JL [62]
- Edwards RJ [60]
- Janowska K [60]
- Mansouri K [60]
- Shi Y [60]
- Wang S [60]
- Xu Y [60]
- Kreutzberger MAB [59]
- Parks R [58]
- Stalls V [58]
- Gobeil S [57]
- Hasegawa M [57]
- Jiang W [57]
- Manne K [56]
- Murphy BJ [56]
- Saunders KO [56]
- Gobeil SM [55]
- Gorman J [55]
- Yildiz O [55]
- Klusch N [54]
- Schendel SL [54]
- Frost A [53]
- Junglas B [53]
- Langer J [53]
- Li K [53]
- Olia AS [53]
- Beck M [52]
- Buck T [52]
- Henderson R [52]
- Krupovic M [52]
- Sawaya MR [52]
- Schneider D [52]
- Boyer DR [51]
- Dennison SM [51]
- Schroder GF [51]
- Sonani RR [51]
- Bedinger D [50]
- Hui S [50]
- Hummer G [50]
Author by ORCID
- Scheres SHW [166]
- Goedert M [143]
- Kotecha A [121]
- Wang F [114]
- Egelman EH [99]
- Sachse C [76]
- Garringer HJ [76]
- Vidal R [76]
- Zhou L [75]
- Gui M [75]
- Kuhlbrandt W [71]
- Kwong PD [70]
- Mclaughlin SH [64]
- Freund SMV [63]
- Li D [62]
- Mills DJ [62]
- Ghetti B [61]
- Murphy BJ [56]
- Klusch N [54]
- Junglas B [53]
- Langer J [53]
- Frost A [52]
- Edwards RJ [52]
- Schneider D [52]
- Gobeil SM [51]
- Hummer G [50]
- Hui S [50]
- Liu C [49]
- Sawaya MR [48]
- Gorman J [47]
- Li X [44]
- Benoit MPMH [43]
- Schroder GF [42]
- Raunser S [41]
- Sosa H [40]
- Hastie KM [40]
- Asenjo AB [40]
- Acharya P [38]
- Yu X [38]
- Eisenberg DS [38]
- Krupovic M [37]
- Stalls V [35]
- Radford SE [35]
- Manne K [35]
- Kikkawa M [34]
- Moss 3Rd Fr [34]
- Zyla D [33]
- Zhang W [33]
- Yang Y [33]
- Hoffmann PC [33]
- Yin J [32]
- Parekh D [32]
- Ge P [32]
- Kosinski J [32]
- Zhou T [32]
- Buck T [32]
- Schendel SL [32]
- Sonani RR [32]
- Zandonatti M [32]
- Ryskeldi-falcon B [32]
- Enriquez A [32]
- Li H [32]
- Saunders KO [31]
- Arseni D [31]
- Ranson NA [31]
- Van Knippenberg B [31]
- Haynes BF [31]
- Houdusse A [31]
- Horn GQ [31]
- Bedinger D [30]
- Mcguire AT [30]
- Ingraham J [30]
- Grigoryan G [30]
- Abraha M [30]
- Sanders RW [30]
- Kim M [30]
- Germann T [30]
- Saphire EO [30]
- Yuan TZ [30]
- Nogales E [30]
- Ali H [30]
- Seo J [30]
- Tan Y [30]
- Sajadi MM [30]
- Glanville J [30]
- Sato AK [30]
- Ho DD [30]
- Lu Y [30]
- Rayaprolu V [30]
- Leung CL [30]
- Snitselaar JL [30]
- Boyer DR [30]
- Feeney E [30]
- Peters B [30]
- Rikhtegaran Tehrani Z [30]
- Aracic S [30]
- Shaffer K [30]
- Tomaras GD [30]
- Hariharan C [30]
- Rabbitts TH [30]
Journal
- NAT COMMUN [780]
- TO BE PUBLISHED [466]
- PNAS [289]
- NATURE [269]
- CELL [264]
- BIORXIV [230]
- ELIFE [227]
- NAT STRUCT MOL BIOL [213]
- SCIENCE [211]
- MOL CELL [174]
- STRUCTURE [141]
- SCI ADV [135]
- CELL REP [107]
- J MOL BIOL [75]
- NUCLEIC ACIDS RES [71]
- COMMUN BIOL [69]
- NAT MICROBIOL [53]
- ACTA NEUROPATHOL [51]
- J BIOL CHEM [44]
- PLOS PATHOG [36]
- EMBO J [33]
- J AM CHEM SOC [32]
- J VIROL [30]
- MBIO [28]
- PLOS BIOL [26]
- DEV CELL [24]
- COMMUN CHEM [23]
- NAT PLANTS [21]
- BLOOD [19]
- CELL DISCOV [17]
- J CELL BIOL [17]
- J EXP MED [17]
- CELL RES [16]
- CURR BIOL [15]
- J STRUCT BIOL [15]
- NAT CHEM BIOL [15]
- EMBO REP [14]
- J GEN VIROL [14]
- ACTA CRYSTALLOGR D STRUCT BIOL [13]
- ISCIENCE [13]
- MOL BIOL CELL [13]
- PROTEIN SCI [13]
- ACS NANO [12]
- SCI REP [12]
- CELL HOST MICROBE [11]
- SCI TRANSL MED [11]
- VIRUSES [11]
- NAT CHEM [10]
- NAT METHODS [10]
- NAT NEUROSCI [10]
- ADV SCI [9]
- FEBS OPEN BIO [9]
- INT J BIOL MACROMOL [9]
- NAT NANOTECHNOL [9]
- MATTER [8]
- NANO LETTERS [8]
- NEURON [8]
- J.THROMB.HAEMOST. [7]
- PLOS ONE [7]
- ANTIOXID REDOX SIGNAL [6]
- CHEM [6]
- NAT CELL BIOL [6]
- RES SQ [6]
- CHEM SCI [5]
- CYTOSKELETON [5]
- ENVIRON SCI TECHNOL. [5]
- FEBS LETT [5]
- FRONT MICROBIOL [5]
- J GEN PHYSIOL [5]
- ACS CHEM BIOL [4]
- ACS CHEM NEUROSCI [4]
- ANGEW CHEM INT ED ENGL [4]
- CELL DEATH DIFFER. [4]
- FRONT PLANT SCI [4]
- INT J MOL SCI [4]
- MSPHERE [4]
- PNAS NEXUS [4]
- SCI SIGNAL [4]
- ACS MACRO LETT [3]
- ACTA PHARMACOL.SIN. [3]
- BIOMOLECULES [3]
- CELL REP PHYS SCI [3]
- CHEMISTRY [3]
- FARADAY DISC.CHEM.SOC [3]
- FRONT IMMUNOL [3]
- IMMUNITY [3]
- J BACTERIOL [3]
- LIFE SCI ALLIANCE [3]
- MOL CELLS [3]
- MOL MICROBIOL [3]
- OPEN BIOL [3]
- PLOS GENET [3]
- PROTEIN CELL [3]
- ACS APPL MATER INTERFACES [2]
- ACS INFECT DIS. [2]
- ADV MATER [2]
- AM J KIDNEY DIS [2]
- ANAL CHEM [2]
- ANNU REV BIOPHYS [2]
- BIOCHEM BIOPHYS REP [2]
Software
- RELION [1292]
- CRYOSPARC [710]
- CTFFIND [176]
- GCTF [96]
- PEET [86]
- DYNAMO [79]
- CRYOLO [76]
- SPIDER [75]
- IMOD [72]
- EMAN2 [65]
- FREALIGN [63]
- EMAN [40]
- SPHIRE [40]
- CISTEM [33]
- PYTOM [20]
- CTFPHASEFLIP [16]
- AV3 [15]
- COOT [15]
- IHRSR [15]
- PHENIX [14]
- FREALIX [13]
- SPARX [12]
- APPION [10]
- ETOMO [10]
- CTFFIND3 [9]
- SPRING [9]
- TOM [9]
- UCSF CHIMERAX [9]
- NOVACTF [8]
- TOM TOOLBOX [8]
- XMIPP [8]
- NOVASTA [7]
- TOPAZ [7]
- AMIRA [6]
- AUTO3DEM [6]
- I3 [5]
- WARP [5]
- HSEARCH_LORENTZ [4]
- MATLAB [4]
- MRA/MSA [4]
- UCSF CHIMERA [3]
- AMIRAFPM [2]
- BSOFT [2]
- E2HELIXBOXER [2]
- EMAN BOXER [2]
- EMCLARITY [2]
- J3DR [2]
- JALIGN [2]
- SPARX/EMAN2 [2]
- STOPGAP [2]
- SUPER-SAMPLING SART [2]
- TOMOCTF [2]
- APPION HELIX BOXER [1]
- COW [1]
- CRYOS [1]
- CTFFIND4 [1]
- CTFTILT [1]
- E2BOXER [1]
- E2HELIXBOXER.PY [1]
- IHRSH [1]
- IMOD/PEET [1]
- MATLAB SCRIPTS [1]
- MOTIONCORR2 [1]
- PROTOMO [1]
- SCIPION [1]
- SEGREFINETHREED [1]
Microscope
- FEI TITAN KRIOS [2718]
- TFS KRIOS [744]
- FEI TALOS ARCTICA [220]
- TFS GLACIOS [196]
- FEI TITAN [120]
- FEI TECNAI F20 [91]
- FEI POLARA 300 [72]
- JEOL CRYO ARM 300 [71]
- FEI TECNAI ARCTICA [42]
- FEI TECNAI 20 [40]
- FEI TECNAI SPIRIT [38]
- FEI TECNAI 12 [37]
- FEI TECNAI F30 [25]
- JEOL 3200FSC [16]
- JEOL 2200FS [13]
- FEI MORGAGNI [10]
- TFS TALOS [8]
- JEOL 2100 [6]
- JEOL 1400 [4]
- JEOL 3100FEF [4]
- FEI TECNAI 10 [3]
- FEI/PHILIPS CM120T [3]
- JEOL 3100FFC [3]
- FEI TECNAI SPHERA [2]
- JEOL 1230 [2]
- JEOL 2100F [2]
- TFS TITAN THEMIS [2]
Electron Source
- FIELD EMISSION GUN [4337]
- LAB6 [103]
- OTHER [44]
- TUNGSTEN HAIRPIN [8]
Film or detector model
- GATAN K3 6K X 4K [1221]
- GATAN K2 SUMMIT 4K X 4K [981]
- GATAN K3 BIOQUANTUM 6K X 4K [735]
- FEI FALCON IV 4K X 4K [509]
- FEI FALCON III 4K X 4K [371]
- FEI FALCON II 4K X 4K [150]
- GATAN K2 QUANTUM 4K X 4K [137]
- GATAN K3 BIOCONTINUUM 6K X 4K [76]
- GATAN ULTRASCAN 4000 4K X 4K [65]
- OTHER [59]
- TVIPS TEMCAM-F416 4K X 4K [38]
- TFS FALCON 4I 4K X 4K [36]
- FEI CETA 4K X 4K [21]
- FEI EAGLE 2K X 2K [18]
- DIRECT ELECTRON DE-20 5K X 3K [16]
- GATAN K2 BASE 4K X 4K [15]
- FEI EAGLE 4K X 4K [9]
- DIRECT ELECTRON DE-16 4K X 4K [6]
- GATAN K2 IS 4K X 4K [6]
- FEI FALCON I 4K X 4K [5]
- GATAN ULTRASCAN 1000 2K X 2K [4]
- DIRECT ELECTRON APOLLO 4K X 4K [3]
- GATAN ORIUS SC200 2K X 2K [3]
- TVIPS TEMCAM-F816 8K X 8K [3]
- GATAN MULTISCAN [2]
- TVIPS TEMCAM-F224 2K X 2K [2]
- TVIPS TEMCAM-F415 4K X 4K [2]
- DECTRIS ELA 1K X 0.5K [1]
- DIRECT ELECTRON DE-12 4K X 3K [1]
- GATAN ORIUS SC600 2.7K X 2.7K [1]
- KODAK 4489 FILM [1]
- KODAK SO-163 FILM [1]
External links
- UniProt [3140]
- PDB [3038]
- PDBe-Kb [2803]
- AlphaFold DB [2692]
- Pfam [2434]
- InterPro [2219]
- Gene Ontology [2166]
- ChEBI [1376]
- ChEMBL [1284]
- DrugBank [1060]
- Complex Portal [609]
- EMPIAR [444]
- CATH [66]
- SCOP2 [50]