Electron Microscopy Data Bank

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Current Database

Current status

Sample type

Organism

Escherichia coli [100]
Homo sapiens [66]
Escherichia coli [35]
Sus scrofa [26]
Mesorhizobium japonicum [10]
Bos taurus [10]
Oryctolagus cuniculus [7]
Mus musculus [6]
Human immunodeficiency virus 1 [6]
Saccharomyces cerevisiae [6]
Enterovirus c [4]
Pseudomonas aeruginosa [4]
Thermus thermophilus [4]
Pseudomonas aeruginosa [4]
Synthetic construct [4]
Influenza a virus [4]
Saccharomyces cerevisiae [4]
Tetrahymena thermophila [4]
Drosophila melanogaster [4]
Pyrococcus furiosus [3]
Schizosaccharomyces pombe [3]
Danio rerio [3]
Gallus gallus [3]
Camelus dromedarius [3]
Escherichia coli [2]
Chikungunya virus [2]
Chikungunya virus [2]
Schizosaccharomyces pombe [2]
Haliangium ochraceum [2]
Aplysia californica [2]
Haliangium ochraceum [2]
Xenopus laevis [2]
Salmonella enterica [2]
Rattus norvegicus [1]
Salmonella phage p22 [1]
Adeno-associated dependoparvovirus a [1]
Vesicular stomatitis virus [1]
Indiana vesiculovirus [1]
Enterovirus c [1]
Cyphellophora europaea [1]
Pseudomonas phage jbd30 [1]
Bacillus subtilis [1]
Bacillus subtilis [1]
Adeno-associated virus [1]
Cyphellophora europaea [1]
Chlamydomonas reinhardtii [1]
Escherichia phage ms2 [1]
Shewanella xiamenensis [1]
Glycine max [1]
Tetrahymena thermophila [1]
Thermus virus p74-26 [1]
Aeropyrum pernix [1]
Adeno-associated dependoparvovirus a [1]
Streptomyces californicus [1]
Cafeteria roenbergensis virus [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Lyumkis D [69]
Demo G [64]
Korostelev AA [61]
Williamson JR [60]
Loveland AB [58]
Rabuck-gibbons JN [42]
Hou YM [24]
Grigorieff N [23]
Nogales E [23]
Tan YZ [19]
Carragher B [18]
Davis JH [18]
Potter CS [18]
Tan Y [18]
Zhang R [18]
Masuda I [16]
Carbone CE [15]
Hite RK [14]
Hassan AH [12]
Mackinnon R [12]
Pinkas M [12]
Svidritskiy E [11]
Biyani N [10]
Chami M [10]
Kellogg EH [10]
Kowal J [10]
Paknejad N [10]
Righetto R [10]
Righetto RD [10]
Stahlberg H [10]
Bartesaghi A [9]
Blaha G [9]
Downing KH [9]
Dworkin J [9]
Earl LA [9]
Falconieri V [9]
Gamper H [9]
Hassan A [9]
Nagarajan S [9]
Nakano Y [9]
Subramaniam S [9]
Chen J [8]
Gamper Jr Hb [8]
Greber BJ [8]
Kubo S [8]
Merk A [8]
Rao P [8]
Roostalu J [8]
Surrey T [8]
Gamper HB [7]
Harrison SC [7]
Tao X [7]
Bui KH [6]
Dai D [6]
Dimaio F [6]
Diaz-avalos R [6]
Hejab NMA [6]
Henkin G [6]
Ichikawa M [6]
Lafrance BJ [6]
Liu Y [6]
Madireddy R [6]
Mccollum CO [6]
Moores CA [6]
Normanno D [6]
Pan J [6]
Passos DO [6]
Zhang Y [6]
Alushin GM [5]
Banerjee S [5]
Filman DJ [5]
Hogle JM [5]
Howes S [5]
Jenni S [5]
Karunatilaka KS [5]
Khalifa AAZ [5]
Lafrance B [5]
Poepsel S [5]
Schotte L [5]
Strauss M [5]
Vargas J [5]
Atherton J [4]
Averhoff B [4]
Bah E [4]
Bhaskara RM [4]
Biswas T [4]
Boxer MB [4]
Brilot AF [4]
Caradonna T [4]
D Imprima E [4]
Davis MI [4]
Diaz JF [4]
Do KT [4]
Eng ET [4]
Fox T [4]
Ghosh G [4]
Guo TW [4]
Hejab NM [4]
Huang DB [4]
Hummer G [4]

Author by ORCID

Korostelev AA [61]
Williamson JR [60]
Demo G [55]
Lyumkis D [43]
Rabuck-gibbons JN [42]
Loveland AB [27]
Grigorieff N [23]
Tan YZ [19]
Nogales E [18]
Davis JH [18]
Hou YM [15]
Paknejad N [10]
Stahlberg H [10]
Hite RK [10]
Subramaniam S [9]
Gamper Jr Hb [8]
Greber BJ [8]
Roostalu J [8]
Zhang R [8]
Gamper HB [7]
Masuda I [7]
Moores CA [6]
Pan J [6]
Mccollum CO [6]
Ichikawa M [6]
Lafrance BJ [6]
Bui KH [6]
Normanno D [6]
Henkin G [6]
Alushin GM [5]
Vargas J [5]
Mackinnon R [5]
Downing KH [5]
Dimaio F [5]
Poepsel S [5]
Filman DJ [5]
Tao X [5]
Kellogg EH [5]
Lafrance B [5]
Vonck J [4]
Bah E [4]
Caradonna T [4]
Hummer G [4]
Brilot AF [4]
Kuhlbrandt W [4]
Bhaskara RM [4]
Eng ET [4]
Raczkowski AM [4]
Davis MI [4]
D'imprima E [4]
Averhoff B [4]
Diaz JF [4]
Polley S [4]
Basore K [3]
Steinmetz MO [3]
Kefi A [3]
Baldus M [3]
Hassan AH [3]
Van Hooff Jje [3]
Jaeger L [3]
Luo Y [3]
Uchiumi T [3]
Ti SC [3]
Cheng M [3]
Grant BJ [3]
Benoit MPMH [3]
Mankin AS [3]
Aleksashin NA [3]
Houben K [3]
Atherton J [3]
Jiang K [3]
Topf M [3]
Fremont DH [3]
Nudler E [3]
Akhmanova A [3]
Ruijgrok PV [3]
Dai D [3]
Huang S [3]
Uranga C [3]
Vazquez-laslop N [3]
Rasouly A [3]
Zhang R [3]
Kim AS [3]
Hilger D [2]
Khalifa AAZ [2]
Kobilka BK [2]
Mcalear TS [2]
Sutter M [2]
Baker TS [2]
Kikkawa M [2]
Robinson CV [2]
Stagg SM [2]
Surrey T [2]
Nishida N [2]
Stanfield RL [2]
Von Loeffelholz O [2]
Shimada I [2]
Wang W [2]
Kubo S [2]
Yang SK [2]

Journal

Software

Microscope

Electron Source

Film or detector model

External links

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EMDB [288]

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EMD-55171

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30S ribosomal subunit RimM-KO with IF1 and IF3 State I

CryoEM

Release date: Feb. 4, 2026
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9ss0
Q-score: 0.424

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55173

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30S ribosomal subunit RimM-KO with IF1 and IF3 State II

CryoEM

Release date: Feb. 4, 2026
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9ss1
Q-score: 0.445

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55174

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30S ribosomal subunit RimM-KO with IF1 and IF3 State III

CryoEM

Release date: Feb. 4, 2026
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9ss2
Q-score: 0.466

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55176

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pre-50S ribosomal subunit in rimM-KO with RsfS -H68

CryoEM

Release date: Feb. 4, 2026
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9ss4

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55177

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50S ribosomal subunit in rimM-KO with RsfS H68

CryoEM

Release date: Feb. 4, 2026
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9ss5

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55181

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30S ribosomal subunit RimM-WT with IF1 and IF3

CryoEM

Release date: Feb. 4, 2026
Resolution: 3.1 Å
EM Method: Single-particle

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55182

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pre-50S ribosomal subunit from RimM-WT with RsfS -H68

CryoEM

Release date: Feb. 4, 2026
Resolution: 2.7 Å
EM Method: Single-particle

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55183

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50S ribosomal subunit from RimM-WT with RsfS H68

CryoEM

Release date: Feb. 4, 2026
Resolution: 2.7 Å
EM Method: Single-particle

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-55185

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70S ribosome from RimM-WT

CryoEM

Release date: Feb. 4, 2026
Resolution: 3.0 Å
EM Method: Single-particle

Hassan A, Nakano Y, Gamper H, Masuda I, Pinkas M, Nagarajan S, Dworkin J, Blaha G, Hou YM, Demo G

bioRxiv (2026) [ DOI: doi:10.64898/2026.01.09.698670 Pubmed: 41542601 ]

EMD-46488

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C1 reconstruction of augmin T-II bonsai on the microtubule

CryoEM

Release date: Aug. 13, 2025
Resolution: 3.83 Å
EM Method: Single-particle

Travis SM, Kraus J, McManus CT, Golden K, Zhang R, Petry S

Nat Commun (2025) 16 pp. 9646-9646 [ Pubmed: 41173848 DOI: doi:10.1038/s41467-025-64650-1 ]

Sort by: Download

Showing 1 - 10 of 288. Page 1 of 29

Display:

Statistics

Download

Select database:

EMDB [288]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Download

Filter By

Current Database

Current status

Sample type

Organism

Escherichia coli [100]
Homo sapiens [66]
Escherichia coli [35]
Sus scrofa [26]
Mesorhizobium japonicum [10]
Bos taurus [10]
Oryctolagus cuniculus [7]
Mus musculus [6]
Human immunodeficiency virus 1 [6]
Saccharomyces cerevisiae [6]
Enterovirus c [4]
Pseudomonas aeruginosa [4]
Thermus thermophilus [4]
Pseudomonas aeruginosa [4]
Synthetic construct [4]
Influenza a virus [4]
Saccharomyces cerevisiae [4]
Tetrahymena thermophila [4]
Drosophila melanogaster [4]
Pyrococcus furiosus [3]
Schizosaccharomyces pombe [3]
Danio rerio [3]
Gallus gallus [3]
Camelus dromedarius [3]
Escherichia coli [2]
Chikungunya virus [2]
Chikungunya virus [2]
Schizosaccharomyces pombe [2]
Haliangium ochraceum [2]
Aplysia californica [2]
Haliangium ochraceum [2]
Xenopus laevis [2]
Salmonella enterica [2]
Rattus norvegicus [1]
Salmonella phage p22 [1]
Adeno-associated dependoparvovirus a [1]
Vesicular stomatitis virus [1]
Indiana vesiculovirus [1]
Enterovirus c [1]
Cyphellophora europaea [1]
Pseudomonas phage jbd30 [1]
Bacillus subtilis [1]
Bacillus subtilis [1]
Adeno-associated virus [1]
Cyphellophora europaea [1]
Chlamydomonas reinhardtii [1]
Escherichia phage ms2 [1]
Shewanella xiamenensis [1]
Glycine max [1]
Tetrahymena thermophila [1]
Thermus virus p74-26 [1]
Aeropyrum pernix [1]
Adeno-associated dependoparvovirus a [1]
Streptomyces californicus [1]
Cafeteria roenbergensis virus [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Lyumkis D [69]
Demo G [64]
Korostelev AA [61]
Williamson JR [60]
Loveland AB [58]
Rabuck-gibbons JN [42]
Hou YM [24]
Grigorieff N [23]
Nogales E [23]
Tan YZ [19]
Carragher B [18]
Davis JH [18]
Potter CS [18]
Tan Y [18]
Zhang R [18]
Masuda I [16]
Carbone CE [15]
Hite RK [14]
Hassan AH [12]
Mackinnon R [12]
Pinkas M [12]
Svidritskiy E [11]
Biyani N [10]
Chami M [10]
Kellogg EH [10]
Kowal J [10]
Paknejad N [10]
Righetto R [10]
Righetto RD [10]
Stahlberg H [10]
Bartesaghi A [9]
Blaha G [9]
Downing KH [9]
Dworkin J [9]
Earl LA [9]
Falconieri V [9]
Gamper H [9]
Hassan A [9]
Nagarajan S [9]
Nakano Y [9]
Subramaniam S [9]
Chen J [8]
Gamper Jr Hb [8]
Greber BJ [8]
Kubo S [8]
Merk A [8]
Rao P [8]
Roostalu J [8]
Surrey T [8]
Gamper HB [7]
Harrison SC [7]
Tao X [7]
Bui KH [6]
Dai D [6]
Dimaio F [6]
Diaz-avalos R [6]
Hejab NMA [6]
Henkin G [6]
Ichikawa M [6]
Lafrance BJ [6]
Liu Y [6]
Madireddy R [6]
Mccollum CO [6]
Moores CA [6]
Normanno D [6]
Pan J [6]
Passos DO [6]
Zhang Y [6]
Alushin GM [5]
Banerjee S [5]
Filman DJ [5]
Hogle JM [5]
Howes S [5]
Jenni S [5]
Karunatilaka KS [5]
Khalifa AAZ [5]
Lafrance B [5]
Poepsel S [5]
Schotte L [5]
Strauss M [5]
Vargas J [5]
Atherton J [4]
Averhoff B [4]
Bah E [4]
Bhaskara RM [4]
Biswas T [4]
Boxer MB [4]
Brilot AF [4]
Caradonna T [4]
D Imprima E [4]
Davis MI [4]
Diaz JF [4]
Do KT [4]
Eng ET [4]
Fox T [4]
Ghosh G [4]
Guo TW [4]
Hejab NM [4]
Huang DB [4]
Hummer G [4]

Author by ORCID

Korostelev AA [61]
Williamson JR [60]
Demo G [55]
Lyumkis D [43]
Rabuck-gibbons JN [42]
Loveland AB [27]
Grigorieff N [23]
Tan YZ [19]
Nogales E [18]
Davis JH [18]
Hou YM [15]
Paknejad N [10]
Stahlberg H [10]
Hite RK [10]
Subramaniam S [9]
Gamper Jr Hb [8]
Greber BJ [8]
Roostalu J [8]
Zhang R [8]
Gamper HB [7]
Masuda I [7]
Moores CA [6]
Pan J [6]
Mccollum CO [6]
Ichikawa M [6]
Lafrance BJ [6]
Bui KH [6]
Normanno D [6]
Henkin G [6]
Alushin GM [5]
Vargas J [5]
Mackinnon R [5]
Downing KH [5]
Dimaio F [5]
Poepsel S [5]
Filman DJ [5]
Tao X [5]
Kellogg EH [5]
Lafrance B [5]
Vonck J [4]
Bah E [4]
Caradonna T [4]
Hummer G [4]
Brilot AF [4]
Kuhlbrandt W [4]
Bhaskara RM [4]
Eng ET [4]
Raczkowski AM [4]
Davis MI [4]
D'imprima E [4]
Averhoff B [4]
Diaz JF [4]
Polley S [4]
Basore K [3]
Steinmetz MO [3]
Kefi A [3]
Baldus M [3]
Hassan AH [3]
Van Hooff Jje [3]
Jaeger L [3]
Luo Y [3]
Uchiumi T [3]
Ti SC [3]
Cheng M [3]
Grant BJ [3]
Benoit MPMH [3]
Mankin AS [3]
Aleksashin NA [3]
Houben K [3]
Atherton J [3]
Jiang K [3]
Topf M [3]
Fremont DH [3]
Nudler E [3]
Akhmanova A [3]
Ruijgrok PV [3]
Dai D [3]
Huang S [3]
Uranga C [3]
Vazquez-laslop N [3]
Rasouly A [3]
Zhang R [3]
Kim AS [3]
Hilger D [2]
Khalifa AAZ [2]
Kobilka BK [2]
Mcalear TS [2]
Sutter M [2]
Baker TS [2]
Kikkawa M [2]
Robinson CV [2]
Stagg SM [2]
Surrey T [2]
Nishida N [2]
Stanfield RL [2]
Von Loeffelholz O [2]
Shimada I [2]
Wang W [2]
Kubo S [2]
Yang SK [2]

Journal

Software

Microscope

Electron Source

Film or detector model

External links