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cellular component
Filter By
Current Database
- EMDB [3373]
- EMPIAR [1]
Current status
- REL [3374]
Sample type
- Cellular component [3316]
- Protein [1523]
- Ligand [866]
- Sample [366]
- Complex [274]
- RNA [75]
- Cell [63]
- DNA [35]
- Other [31]
- Virus [24]
- Em label [1]
Organism
- Homo sapiens [949]
- Mus musculus [289]
- Bos taurus [211]
- Chlamydomonas reinhardtii [195]
- Sus scrofa [110]
- Tetrahymena thermophila [107]
- Trypanosoma brucei [88]
- Oryctolagus cuniculus [80]
- Escherichia coli [78]
- Saccharomyces cerevisiae [70]
- Severe acute respiratory syndrome coronavirus [69]
- Synthetic construct [66]
- Drosophila melanogaster [55]
- (no species) [51]
- Torpedo marmorata [38]
- Danio rerio [37]
- Xenopus laevis [36]
- Rattus norvegicus [32]
- Campylobacter jejuni [29]
- Sus scrofa [27]
- Escherichia coli [24]
- Borrelia burgdorferi [23]
- Myxococcus xanthus [23]
- Arabidopsis thaliana [23]
- Schizosaccharomyces pombe [22]
- Yarrowia lipolytica [22]
- Gallus gallus [20]
- Porcine epidemic diarrhea virus [18]
- Tetrahymena thermophila [17]
- Strongylocentrotus purpuratus [17]
- Mycobacterium tuberculosis [16]
- Caenorhabditis elegans [16]
- Streptococcus pneumoniae [15]
- Trypanosoma brucei [14]
- Leishmania tarentolae [13]
- Trypanosoma brucei [13]
- Toxoplasma gondii [13]
- Vibrio cholerae [12]
- Influenza a virus [11]
- Clostridioides difficile [11]
- Pseudomonas aeruginosa [11]
- Lactococcus lactis [10]
- Salmonella enterica [10]
- Enterobacteria phage t4 [9]
- Clostridium perfringens [9]
- Pseudomonas aeruginosa [9]
- Sulfolobus acidocaldarius [9]
- Haliangium ochraceum [9]
- Saccharomyces cerevisiae [9]
- Shigella flexneri [9]
- Human immunodeficiency virus 1 [8]
- Middle east respiratory syndrome-related coronavirus [8]
- Chaetomium thermophilum [8]
- Spinacia oleracea [8]
- Parengyodontium album [8]
- Plasmodium falciparum [8]
- Aggregatibacter actinomycetemcomitans [8]
- Mycobacterium tuberculosis [8]
- African swine fever virus [7]
- Bacillus subtilis [7]
- Brevibacterium linens [7]
- Helicobacter pylori [7]
- Cryptosporidium parvum [7]
- Porphyromonas gingivalis [7]
- Candida albicans [7]
- Influenza a virus [7]
- Escherichia coli [7]
- Thermococcus gammatolerans [6]
- Salmonella enterica [6]
- Chikungunya virus [6]
- Comamonas testosteroni [6]
- Stigmatella aurantiaca [6]
- Nitrosopumilus maritimus [6]
- Zea mays [6]
- Paramecium tetraurelia [6]
- Caldanaerobacter subterraneus [5]
- Staphylococcus aureus [5]
- Alkalihalobacillus halodurans [5]
- Teranympha mirabilis [5]
- Plasmodium falciparum [5]
- Escherichia coli [5]
- Trichonympha agilis [5]
- Haliangium ochraceum [5]
- Salmonella enterica [5]
- (no species) [4]
- Human mastadenovirus c [4]
- Dengue virus [4]
- West nile virus [4]
- Litorilinea aerophila [4]
- Lactococcus lactis [4]
- Desulfofustis sp. pb-srb1 [4]
- Bacillus cereus [4]
- Acetivibrio thermocellus [4]
- Semliki forest virus [4]
- Synechococcus sp. wh 8109 [4]
- Pseudomonas phage 201phi2-1 [4]
- Lethocerus indicus [4]
- Desulfacinum sp. [4]
- Mycolicibacterium smegmatis [4]
- (no species) [4]
EM Method
- Single-particle [1807]
- Subtomogram averaging [747]
- Tomography [452]
- Helical reconstruction [334]
- Electron Crystallography [33]
Resolution
- < 2Å [34]
- ≥ 2Å and < 3Å [422]
- ≥ 3Å and < 4Å [1028]
- ≥ 4Å and < 5Å [246]
- ≥ 5Å and < 6Å [68]
- ≥ 6Å and < 8Å [140]
- ≥ 8Å and < 12Å [181]
- ≥ 12Å and < 16Å [176]
- ≥ 16Å and < 20Å [84]
- ≥ 20Å and < 30Å [215]
- ≥ 30Å [478]
Model molecular weight
- 0-50 kDa [1]
- 50-100 kDa [8]
- 100-250 kDa [12]
- 250-500 kDa [17]
- 500-1000 kDa [11]
- 1-2 MDa [5]
- 2-5 MDa [1]
- 5-10 MDa [1]
Release Date
- 2026 [56]
- 2025 [690]
- 2024 [498]
- 2023 [333]
- 2022 [394]
- 2021 [239]
- 2020 [203]
- 2019 [195]
- 2018 [261]
- 2017 [99]
- 2016 [104]
- 2015 [44]
- 2014 [67]
- 2013 [30]
- 2012 [61]
- 2011 [34]
- 2010 [15]
- 2009 [22]
- 2008 [10]
- 2006 [6]
- 2005 [5]
- 2004 [2]
- 2003 [5]
- 2002 [1]
Author by name
- Liu J [222]
- Ren G [167]
- Rudenko G [134]
- Liu JF [130]
- Misra A [130]
- Reddy S [130]
- White MA [130]
- Wang H [125]
- Zhou ZH [112]
- Reddy MVVVS [111]
- Liu C [109]
- Li D [107]
- Baumeister W [102]
- Hill KL [98]
- Brown A [97]
- Oda T [94]
- Liu S [92]
- Shimogawa MM [92]
- Liu X [91]
- Kassem AM [88]
- Kikkawa M [88]
- Langousis G [88]
- Wijono A [88]
- Wohlschlegel JA [88]
- Xia X [88]
- Sun C [87]
- Zeev-ben-mordehai T [86]
- Zhang R [86]
- Leung MR [85]
- Noteborn WEM [84]
- Huang W [81]
- Bui KH [79]
- Yang TJ [78]
- Zeng J [78]
- Anderson JR [77]
- Niu Q [77]
- Zhang X [77]
- Yanagisawa H [72]
- Wang Y [68]
- Chang YC [67]
- Zhang Y [67]
- Hsu STD [66]
- Li W [66]
- Agard DA [64]
- Jensen GJ [61]
- Sun L [61]
- Wang J [61]
- Li S [60]
- Sali A [59]
- Ishikawa T [54]
- Jasnin M [53]
- Tao YQ [52]
- Plitzko JM [51]
- Li A [50]
- Stevens R [50]
- Stevens RC [50]
- White K [50]
- White KL [50]
- Yu B [50]
- Yu PY [50]
- Zhu X [50]
- Li J [49]
- Zhang J [49]
- Beeby M [48]
- Nicastro D [48]
- Wang X [47]
- Yagi T [45]
- Zhang S [45]
- Hendrixson DR [43]
- Li Y [43]
- Liu Y [43]
- Wang Z [43]
- Fernandez JJ [42]
- Chang YW [40]
- Guo J [40]
- Hill K [40]
- Hsu SD [40]
- Joachimiak E [40]
- Chiu W [39]
- Sun Y [39]
- Yu Y [39]
- Zhao QY [39]
- Chen X [38]
- Legal T [38]
- Unwin N [38]
- Valente-paterno M [38]
- Beck M [37]
- Wang L [37]
- Winey M [37]
- Xu J [35]
- Chen J [34]
- Raunser S [34]
- Gaertig J [33]
- Xia W [33]
- Asenjo AB [32]
- Benoit MPMH [32]
- Li Z [32]
- Pearson CG [32]
- Pigino G [32]
- Sosa H [32]
Author by ORCID
- Chang YC [3]
- Yang TJ [3]
- Yang X [2]
- Wang Y [2]
- Ye S [2]
- Cai W [2]
- Fan M [2]
- Ye F [2]
- Chang S [2]
- Xu X [2]
- Ma D [2]
- Hu M [2]
- Yu PY [2]
- Hsu SD [2]
- Su N [2]
- Liu Q [2]
- Yang W [2]
- Guo J [2]
- Wang R [2]
- Xu H [2]
- Hurley JH [1]
- Valenzuela S [1]
- Tsai JC [1]
- Zhang Y [1]
- Suzuki H [1]
- Kopp A [1]
- Pradhan B [1]
- Dybkov O [1]
- Viscomi C [1]
- Steinmetz MO [1]
- Zheng W [1]
- Fan K [1]
- Rodriguez-alcazar JF [1]
- Sun Y [1]
- Li X [1]
- Kozai D [1]
- Macao B [1]
- Kumar V [1]
- Hochheiser IV [1]
- Tan YZ [1]
- Gratz L [1]
- Zhang Z [1]
- Behrmann E [1]
- Liu ZJ [1]
- Cao P [1]
- Ho MR [1]
- Hollaus D [1]
- Wang Y [1]
- He X [1]
- Shima T [1]
- Xu Y [1]
- Sillamaa S [1]
- Shi ZL [1]
- Minczuk M [1]
- Huang P [1]
- Riegelhaupt PM [1]
- Zhang K [1]
- Falkenberg M [1]
- Hagelueken G [1]
- Hooy RM [1]
- Surrey T [1]
- Bohn S [1]
- Hardwick SW [1]
- Lea SM [1]
- Mao Y [1]
- Tian C [1]
- Yan C [1]
- Zegeye ED [1]
- Zuppardo A [1]
- Pang P [1]
- Chai P [1]
- Yuan S [1]
- Zhou P [1]
- Qian H [1]
- Chirgadze DY [1]
- Hirokawa N [1]
- Wang W [1]
- Ma J [1]
- Kumar S [1]
- Kinsolving J [1]
- Gao X [1]
- Ruhnow F [1]
- Silva-pinheiro P [1]
- Long H [1]
- Jain M [1]
- Evans DJ [1]
- Ling X [1]
- Yagi T [1]
- Zhuang Y [1]
- Hnizda A [1]
- Mamedov MR [1]
- Li D [1]
- Blum TB [1]
- Ng TS [1]
- Behrmann H [1]
- Pollard TD [1]
- Muhleip A [1]
- Kuhlbrandt W [1]
- Watanabe TM [1]
- Fislage M [1]
Journal
- NAT COMMUN [491]
- TO BE PUBLISHED [368]
- NATURE [252]
- PNAS [224]
- SCIENCE [196]
- ELIFE [182]
- J MOL BIOL [139]
- NAT STRUCT MOL BIOL [132]
- BIORXIV [124]
- STRUCTURE [116]
- SCI ADV [100]
- CELL [99]
- J CELL BIOL [71]
- EMBO J [67]
- MOL BIOL CELL [67]
- MOL CELL [55]
- CURR BIOL [43]
- J STRUCT BIOL [41]
- NAT METHODS [36]
- J BIOL CHEM [30]
- CELL DISCOV [25]
- CELL REP [25]
- MBIO [25]
- NAT MICROBIOL [24]
- COMMUN BIOL [23]
- J BACTERIOL [22]
- LIFE SCI ALLIANCE [22]
- BIOCHIM BIOPHYS ACTA MOL CELL BIOL LIPIDS [21]
- IUCRJ [21]
- NUCLEIC ACIDS RES [19]
- CELL RES [18]
- SCI REP [18]
- J CELL SCI [17]
- NAT PLANTS [16]
- PLOS ONE [16]
- NAT CELL BIOL [15]
- OPEN BIOL [13]
- ACTA CRYSTALLOGR D STRUCT BIOL [12]
- DEV CELL [12]
- PLOS PATHOG [12]
- ACS CENT SCI [11]
- NAT CHEM BIOL [11]
- ACS NANO [10]
- ADV SCI [10]
- INT J MOL SCI [9]
- PROTEIN CELL [9]
- BIOCHEM BIOPHYS RES COMMUN [8]
- CYTOSKELETON [8]
- FRONT MOL BIOSCI [7]
- ISCIENCE [7]
- MOL MICROBIOL [7]
- PLOS BIOL [7]
- COMMUN CHEM [6]
- EMBO REP [6]
- FASEB J [6]
- FEBS LETT [6]
- PLOS GENET [6]
- PROTEIN SCI [6]
- ACTA NEUROPATHOL [5]
- BLOOD [5]
- INT J BIOL MACROMOL [5]
- J AM CHEM SOC [5]
- NAT CHEM [5]
- BIOCHEMISTRY [4]
- BIOMACROMOLECULES [4]
- FEBS J [4]
- J MICROSC [4]
- MICROSC MICROANAL [4]
- MSPHERE [4]
- NANO LETTERS [4]
- NEURON [4]
- ADV MATER [3]
- ARCH.BIOCHEM.BIOPHYS. [3]
- CHEM SCI [3]
- J VIROL [3]
- MEDRXIV [3]
- MICROBIOL SPECTR [3]
- PLOS COMPUT BIOL [3]
- PNAS NEXUS [3]
- ANGEW CHEM INT ED ENGL [2]
- BIOCHEM BIOPHYS REP [2]
- BIOPHYS J [2]
- BR.J.PHARMACOL. [2]
- CELL HOST MICROBE [2]
- CELL INSIGHT [2]
- FRONT CELL INFECT MICROBIOL [2]
- FRONT MICROBIOL [2]
- IMMUNITY [2]
- ISME J [2]
- J GEN PHYSIOL [2]
- J GENET GENOMICS [2]
- J STRUCT BIOL X [2]
- J VIS EXP [2]
- J.BIOCHEM. [2]
- METHODS [2]
- MOL PLANT [2]
- NEW PHYTOL. [2]
- PLANT CELL [2]
- PROTEINS [2]
- SSRN [2]
Software
- RELION [812]
- CRYOSPARC [572]
- IMOD [371]
- TOMOCTF [138]
- CTFFIND [123]
- PEET [81]
- DYNAMO [70]
- GCTF [47]
- FREALIGN [43]
- SPIDER [40]
- EMAN2 [38]
- IMOD, PEET [32]
- PYTOM [27]
- MATLAB [23]
- NOVASTA [21]
- IMOD, BSOFT, SPIDER, TOM, PACKAGE, MATLAB [20]
- ETOMO [18]
- IMOD, TOMO3D, PEET [18]
- TOMOALIGN [18]
- WARP [18]
- CHIMERA [17]
- EMAN [16]
- PEET, RUBY-HELIX [13]
- TOMO3D [13]
- AIMLESS [12]
- CTFPHASEFLIP [12]
- MOLREP [12]
- POINTLESS [12]
- PROTOMO [12]
- IMOD, PROTOMO [11]
- IMOD, RAPTOR, PROTOMO [11]
- XMIPP [11]
- AV3 [10]
- COOT [10]
- IMOD, BSOFT [10]
- TOM [10]
- UCSF CHIMERA [10]
- PHENIX [9]
- TOM, TOOLBOX, BSOFT, XMIPP [9]
- CISTEM [8]
- EMIRA [8]
- EMAN2, SPIDER, BESPOKE-2D-ALIGNMENT, BESPOKE-X-AND-Y-SHIFTING [6]
- SPHIRE [6]
- CTFFIND3 [5]
- IHRSR [5]
- IMOD, EMAN2 [5]
- IMOD, TOM, PACKAGE, MATLAB [5]
- IMAGIC [4]
- IMOD, TOMO3D [4]
- PRIISM/IVE [4]
- REFMAC [4]
- SPIDER, IHRSR [4]
- AMIRAMOL 3.0 [3]
- IPET [3]
- PROTOMO, IMOD [3]
- SPARX [3]
- SPIDER, WELLMAP [3]
- URO [3]
- 3DMOD [2]
- AMIRA, IMOD [2]
- CCP4 [2]
- CHIMERA, O, COOT [2]
- CRYOLO [2]
- CTFFIND4 [2]
- EM [2]
- EMAN2 SPARX [2]
- EMAN2, FREALIGN, IHRSR [2]
- IMOD, DYNAMO [2]
- IMOD, SPIDER, BSOFT [2]
- JSPR [2]
- MRC [2]
- MRC, EMAN [2]
- NOVACTF [2]
- SITUS [2]
- SPIDER, IMAGIC [2]
- UCSF CHIMERAX [2]
- URO, REFMAC, NMFF [2]
- UROX AND CHIMERA [2]
- XDS [2]
- XMIPP, IMAGIC [2]
- XSCALE [2]
- BSOFT [1]
- COAN [1]
- COW [1]
- CRYODRGN [1]
- CTFFIND3, RELION [1]
- CTFFIND3, RELION, 1.2 [1]
- CTFTILT [1]
- E2BOXER [1]
- E2HELIXBOXER.PY [1]
- EM-PACKAGE, TOM FOR MATLAB [1]
- EM3DR2, PFT2, CTFMIX [1]
- EMAN, HIMPOSE, SPIDER [1]
- EMAN, SPIDER [1]
- EMCLARITY [1]
- EMFIT [1]
- ETOMO, IMOD [1]
- ETOMO,RAPTOR [1]
- EVOL-ALIGN [1]
- FREALIGN AND SPIDER [1]
Microscope
- FEI TITAN KRIOS [1607]
- TFS KRIOS [650]
- ZEISS LIBRA120PLUS [158]
- FEI POLARA 300 [149]
- FEI TALOS ARCTICA [147]
- FEI TECNAI F20 [134]
- FEI TITAN [83]
- FEI TECNAI 20 [70]
- TFS GLACIOS [52]
- JEOL 3100FFC [51]
- FEI TECNAI F30 [43]
- JEOL 2100 [26]
- JEOL CRYO ARM 300 [23]
- FEI TECNAI 12 [21]
- FEI/PHILIPS CM200FEG [20]
- OTHER [18]
- JEOL 3200FSC [15]
- FEI/PHILIPS CM300FEG/T [14]
- FEI TECNAI ARCTICA [13]
- JEOL 2200FS [11]
- JEOL 2100F [9]
- JEOL 2010F [7]
- JEOL 3100FEF [7]
- TFS TALOS [7]
- FEI TECNAI SPIRIT [5]
- HITACHI H3000 UHVEM [4]
- JEOL 1200EX [3]
- JEOL 2200FSC [3]
- JEOL KYOTO-3000SFF [3]
- FEI/PHILIPS CM120T [2]
- FEI/PHILIPS CM200FEG/UT [2]
- FEI/PHILIPS CM300FEG/HE [2]
- JEOL 3000SFF [2]
- JEOL 3200FS [2]
- TFS TITAN THEMIS [2]
- FEI MORGAGNI [1]
- FEI/PHILIPS CM12 [1]
- FEI/PHILIPS CM200FEG/ST [1]
- FEI/PHILIPS EM400 [1]
- JEOL 100CX [1]
- JEOL 1200 [1]
- JEOL 1200EXII [1]
- JEOL 1230 [1]
- JEOL CRYO ARM 200 [1]
- TFS TUNDRA [1]
Electron Source
- FIELD EMISSION GUN [3103]
- LAB6 [252]
- TUNGSTEN HAIRPIN [13]
- OTHER [5]
Film or detector model
- GATAN K2 SUMMIT 4K X 4K [726]
- GATAN K3 6K X 4K [656]
- GATAN K3 BIOQUANTUM 6K X 4K [607]
- FEI FALCON IV 4K X 4K [233]
- GATAN ULTRASCAN 4000 4K X 4K [212]
- FEI FALCON III 4K X 4K [149]
- TVIPS TEMCAM-F416 4K X 4K [134]
- FEI FALCON II 4K X 4K [104]
- GATAN K2 QUANTUM 4K X 4K [92]
- TFS FALCON 4I 4K X 4K [65]
- GATAN ULTRASCAN 1000 2K X 2K [64]
- GATAN K3 BIOCONTINUUM 6K X 4K [50]
- KODAK SO-163 FILM [40]
- GATAN MULTISCAN [21]
- TVIPS TEMCAM-F415 4K X 4K [21]
- FEI EAGLE 4K X 4K [19]
- GATAN K2 BASE 4K X 4K [15]
- GENERIC CCD [13]
- FEI CETA 4K X 4K [12]
- GATAN K2 4K X 4K [12]
- GENERIC GATAN [10]
- TVIPS TEMCAM-F216 2K X 2K [10]
- GENERIC GATAN 2K X 2K [9]
- TVIPS TEMCAM-F224 2K X 2K [7]
- GENERIC CCD 2K X 2K [6]
- GENERIC GATAN 4K X 4K [6]
- OTHER [6]
- DECTRIS ARINA 0.2K X 0.2K [4]
- DIRECT ELECTRON DE-10 5K X 4K [4]
- GATAN K2 IS 4K X 4K [4]
- GENERIC TVIPS 4K X 4K [4]
- DIRECT ELECTRON DE-12 4K X 3K [3]
- FEI FALCON I 4K X 4K [3]
- DIRECT ELECTRON DE-20 5K X 3K [2]
- GATAN ORIUS SC200 2K X 2K [2]
- SIA 15C 3K X 3K [2]
- DIRECT ELECTRON DE-64 8K X 8K [1]
- FEI EAGLE 2K X 2K [1]
- GENERIC TVIPS [1]
- GENERIC TVIPS 2K X 2K [1]
- KODAK 4489 FILM [1]
- TVIPS TEMCAM-F816 8K X 8K [1]
EMPIAR Experiment type
- FIB-SEM [1]
EMPIAR Image category
- RECONSTRUCTED VOLUMES [1]
External links
- PDB [57]
- UniProt [52]
- PDBe-Kb [49]
- InterPro [47]
- AlphaFold DB [46]
- Pfam [46]
- Gene Ontology [41]
- ChEBI [33]
- ChEMBL [30]
- DrugBank [26]
- EMPIAR [2]
- CATH [1]
- Complex Portal [1]
- SCOP2 [1]
Release date: March 4, 2026
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 9clm
Q-score: 0.265
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 9clm
Q-score: 0.265
Dubey S, Noinaj N
To Be Published
Release date: March 4, 2026
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9nej
Q-score: 0.509
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9nej
Q-score: 0.509
Khandelwal NK, Gupta M, Stroud RM
To Be Published
Release date: March 4, 2026
Resolution: 3.05 Å
EM Method: Single-particle
Fitted PDBs: 9j9x
Q-score: 0.409
Resolution: 3.05 Å
EM Method: Single-particle
Fitted PDBs: 9j9x
Q-score: 0.409
Pan ZL, Hu H, Su ZM
To Be Published
Release date: March 4, 2026
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 9jc8
Q-score: 0.234
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 9jc8
Q-score: 0.234
Pan ZL, Hu H, Su ZM
To Be Published
Release date: March 4, 2026
Resolution: 18.0 Å
EM Method: Subtomogram averaging
Resolution: 18.0 Å
EM Method: Subtomogram averaging
Zou T, Zhang J, Zhang Y, Zhang M, Wang H, Pan Y, Wang H
To Be Published
CryoEM
Liu S, Gad M, Li C, Cho K, Wangdu K, Liu Y, Millet A, Kojima H, Urnavicius L, Patti G, Belay V, Vinogradova K, Hite RK, Birsoy K
To Be Published
Release date: Feb. 25, 2026
Resolution: 3.23 Å
EM Method: Single-particle
Resolution: 3.23 Å
EM Method: Single-particle
Liu S, Gad M, Li C, Cho K, Liu Y, Wangdu K, Belay V, Millet A, Kojima H, Sanford H, Wolk M, Urnavicius L, Fedorova M, Patti GJ, Vinogradova EV, Hite RK, Birsoy K
bioRxiv (2026) [ Pubmed: 41676593 DOI: doi:10.64898/2026.02.01.703113 ]
CryoEM
Sharma N, Zhou W, French JB
Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-69423-y Pubmed: 41688441 ]
Release date: Feb. 25, 2026
Resolution: 3.22 Å
EM Method: Single-particle
Fitted PDBs: 9nal
Q-score: 0.471
Resolution: 3.22 Å
EM Method: Single-particle
Fitted PDBs: 9nal
Q-score: 0.471
Sharma N, Zhou W, French JB
Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-69423-y Pubmed: 41688441 ]
Release date: Feb. 25, 2026
Resolution: 3.19 Å
EM Method: Single-particle
Fitted PDBs: 9nb3
Q-score: 0.484
Resolution: 3.19 Å
EM Method: Single-particle
Fitted PDBs: 9nb3
Q-score: 0.484
Sharma N, Zhou W, French JB
Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-69423-y Pubmed: 41688441 ]
Filter By
Current Database
- EMDB [3373]
- EMPIAR [1]
Current status
- REL [3374]
Sample type
- Cellular component [3316]
- Protein [1523]
- Ligand [866]
- Sample [366]
- Complex [274]
- RNA [75]
- Cell [63]
- DNA [35]
- Other [31]
- Virus [24]
- Em label [1]
Organism
- Homo sapiens [949]
- Mus musculus [289]
- Bos taurus [211]
- Chlamydomonas reinhardtii [195]
- Sus scrofa [110]
- Tetrahymena thermophila [107]
- Trypanosoma brucei [88]
- Oryctolagus cuniculus [80]
- Escherichia coli [78]
- Saccharomyces cerevisiae [70]
- Severe acute respiratory syndrome coronavirus [69]
- Synthetic construct [66]
- Drosophila melanogaster [55]
- (no species) [51]
- Torpedo marmorata [38]
- Danio rerio [37]
- Xenopus laevis [36]
- Rattus norvegicus [32]
- Campylobacter jejuni [29]
- Sus scrofa [27]
- Escherichia coli [24]
- Borrelia burgdorferi [23]
- Myxococcus xanthus [23]
- Arabidopsis thaliana [23]
- Schizosaccharomyces pombe [22]
- Yarrowia lipolytica [22]
- Gallus gallus [20]
- Porcine epidemic diarrhea virus [18]
- Tetrahymena thermophila [17]
- Strongylocentrotus purpuratus [17]
- Mycobacterium tuberculosis [16]
- Caenorhabditis elegans [16]
- Streptococcus pneumoniae [15]
- Trypanosoma brucei [14]
- Leishmania tarentolae [13]
- Trypanosoma brucei [13]
- Toxoplasma gondii [13]
- Vibrio cholerae [12]
- Influenza a virus [11]
- Clostridioides difficile [11]
- Pseudomonas aeruginosa [11]
- Lactococcus lactis [10]
- Salmonella enterica [10]
- Enterobacteria phage t4 [9]
- Clostridium perfringens [9]
- Pseudomonas aeruginosa [9]
- Sulfolobus acidocaldarius [9]
- Haliangium ochraceum [9]
- Saccharomyces cerevisiae [9]
- Shigella flexneri [9]
- Human immunodeficiency virus 1 [8]
- Middle east respiratory syndrome-related coronavirus [8]
- Chaetomium thermophilum [8]
- Spinacia oleracea [8]
- Parengyodontium album [8]
- Plasmodium falciparum [8]
- Aggregatibacter actinomycetemcomitans [8]
- Mycobacterium tuberculosis [8]
- African swine fever virus [7]
- Bacillus subtilis [7]
- Brevibacterium linens [7]
- Helicobacter pylori [7]
- Cryptosporidium parvum [7]
- Porphyromonas gingivalis [7]
- Candida albicans [7]
- Influenza a virus [7]
- Escherichia coli [7]
- Thermococcus gammatolerans [6]
- Salmonella enterica [6]
- Chikungunya virus [6]
- Comamonas testosteroni [6]
- Stigmatella aurantiaca [6]
- Nitrosopumilus maritimus [6]
- Zea mays [6]
- Paramecium tetraurelia [6]
- Caldanaerobacter subterraneus [5]
- Staphylococcus aureus [5]
- Alkalihalobacillus halodurans [5]
- Teranympha mirabilis [5]
- Plasmodium falciparum [5]
- Escherichia coli [5]
- Trichonympha agilis [5]
- Haliangium ochraceum [5]
- Salmonella enterica [5]
- (no species) [4]
- Human mastadenovirus c [4]
- Dengue virus [4]
- West nile virus [4]
- Litorilinea aerophila [4]
- Lactococcus lactis [4]
- Desulfofustis sp. pb-srb1 [4]
- Bacillus cereus [4]
- Acetivibrio thermocellus [4]
- Semliki forest virus [4]
- Synechococcus sp. wh 8109 [4]
- Pseudomonas phage 201phi2-1 [4]
- Lethocerus indicus [4]
- Desulfacinum sp. [4]
- Mycolicibacterium smegmatis [4]
- (no species) [4]
EM Method
- Single-particle [1807]
- Subtomogram averaging [747]
- Tomography [452]
- Helical reconstruction [334]
- Electron Crystallography [33]
Resolution
- < 2Å [34]
- ≥ 2Å and < 3Å [422]
- ≥ 3Å and < 4Å [1028]
- ≥ 4Å and < 5Å [246]
- ≥ 5Å and < 6Å [68]
- ≥ 6Å and < 8Å [140]
- ≥ 8Å and < 12Å [181]
- ≥ 12Å and < 16Å [176]
- ≥ 16Å and < 20Å [84]
- ≥ 20Å and < 30Å [215]
- ≥ 30Å [478]
Model molecular weight
- 0-50 kDa [1]
- 50-100 kDa [8]
- 100-250 kDa [12]
- 250-500 kDa [17]
- 500-1000 kDa [11]
- 1-2 MDa [5]
- 2-5 MDa [1]
- 5-10 MDa [1]
Release Date
- 2026 [56]
- 2025 [690]
- 2024 [498]
- 2023 [333]
- 2022 [394]
- 2021 [239]
- 2020 [203]
- 2019 [195]
- 2018 [261]
- 2017 [99]
- 2016 [104]
- 2015 [44]
- 2014 [67]
- 2013 [30]
- 2012 [61]
- 2011 [34]
- 2010 [15]
- 2009 [22]
- 2008 [10]
- 2006 [6]
- 2005 [5]
- 2004 [2]
- 2003 [5]
- 2002 [1]
Author by name
- Liu J [222]
- Ren G [167]
- Rudenko G [134]
- Liu JF [130]
- Misra A [130]
- Reddy S [130]
- White MA [130]
- Wang H [125]
- Zhou ZH [112]
- Reddy MVVVS [111]
- Liu C [109]
- Li D [107]
- Baumeister W [102]
- Hill KL [98]
- Brown A [97]
- Oda T [94]
- Liu S [92]
- Shimogawa MM [92]
- Liu X [91]
- Kassem AM [88]
- Kikkawa M [88]
- Langousis G [88]
- Wijono A [88]
- Wohlschlegel JA [88]
- Xia X [88]
- Sun C [87]
- Zeev-ben-mordehai T [86]
- Zhang R [86]
- Leung MR [85]
- Noteborn WEM [84]
- Huang W [81]
- Bui KH [79]
- Yang TJ [78]
- Zeng J [78]
- Anderson JR [77]
- Niu Q [77]
- Zhang X [77]
- Yanagisawa H [72]
- Wang Y [68]
- Chang YC [67]
- Zhang Y [67]
- Hsu STD [66]
- Li W [66]
- Agard DA [64]
- Jensen GJ [61]
- Sun L [61]
- Wang J [61]
- Li S [60]
- Sali A [59]
- Ishikawa T [54]
- Jasnin M [53]
- Tao YQ [52]
- Plitzko JM [51]
- Li A [50]
- Stevens R [50]
- Stevens RC [50]
- White K [50]
- White KL [50]
- Yu B [50]
- Yu PY [50]
- Zhu X [50]
- Li J [49]
- Zhang J [49]
- Beeby M [48]
- Nicastro D [48]
- Wang X [47]
- Yagi T [45]
- Zhang S [45]
- Hendrixson DR [43]
- Li Y [43]
- Liu Y [43]
- Wang Z [43]
- Fernandez JJ [42]
- Chang YW [40]
- Guo J [40]
- Hill K [40]
- Hsu SD [40]
- Joachimiak E [40]
- Chiu W [39]
- Sun Y [39]
- Yu Y [39]
- Zhao QY [39]
- Chen X [38]
- Legal T [38]
- Unwin N [38]
- Valente-paterno M [38]
- Beck M [37]
- Wang L [37]
- Winey M [37]
- Xu J [35]
- Chen J [34]
- Raunser S [34]
- Gaertig J [33]
- Xia W [33]
- Asenjo AB [32]
- Benoit MPMH [32]
- Li Z [32]
- Pearson CG [32]
- Pigino G [32]
- Sosa H [32]
Author by ORCID
- Chang YC [3]
- Yang TJ [3]
- Yang X [2]
- Wang Y [2]
- Ye S [2]
- Cai W [2]
- Fan M [2]
- Ye F [2]
- Chang S [2]
- Xu X [2]
- Ma D [2]
- Hu M [2]
- Yu PY [2]
- Hsu SD [2]
- Su N [2]
- Liu Q [2]
- Yang W [2]
- Guo J [2]
- Wang R [2]
- Xu H [2]
- Hurley JH [1]
- Valenzuela S [1]
- Tsai JC [1]
- Zhang Y [1]
- Suzuki H [1]
- Kopp A [1]
- Pradhan B [1]
- Dybkov O [1]
- Viscomi C [1]
- Steinmetz MO [1]
- Zheng W [1]
- Fan K [1]
- Rodriguez-alcazar JF [1]
- Sun Y [1]
- Li X [1]
- Kozai D [1]
- Macao B [1]
- Kumar V [1]
- Hochheiser IV [1]
- Tan YZ [1]
- Gratz L [1]
- Zhang Z [1]
- Behrmann E [1]
- Liu ZJ [1]
- Cao P [1]
- Ho MR [1]
- Hollaus D [1]
- Wang Y [1]
- He X [1]
- Shima T [1]
- Xu Y [1]
- Sillamaa S [1]
- Shi ZL [1]
- Minczuk M [1]
- Huang P [1]
- Riegelhaupt PM [1]
- Zhang K [1]
- Falkenberg M [1]
- Hagelueken G [1]
- Hooy RM [1]
- Surrey T [1]
- Bohn S [1]
- Hardwick SW [1]
- Lea SM [1]
- Mao Y [1]
- Tian C [1]
- Yan C [1]
- Zegeye ED [1]
- Zuppardo A [1]
- Pang P [1]
- Chai P [1]
- Yuan S [1]
- Zhou P [1]
- Qian H [1]
- Chirgadze DY [1]
- Hirokawa N [1]
- Wang W [1]
- Ma J [1]
- Kumar S [1]
- Kinsolving J [1]
- Gao X [1]
- Ruhnow F [1]
- Silva-pinheiro P [1]
- Long H [1]
- Jain M [1]
- Evans DJ [1]
- Ling X [1]
- Yagi T [1]
- Zhuang Y [1]
- Hnizda A [1]
- Mamedov MR [1]
- Li D [1]
- Blum TB [1]
- Ng TS [1]
- Behrmann H [1]
- Pollard TD [1]
- Muhleip A [1]
- Kuhlbrandt W [1]
- Watanabe TM [1]
- Fislage M [1]
Journal
- NAT COMMUN [491]
- TO BE PUBLISHED [368]
- NATURE [252]
- PNAS [224]
- SCIENCE [196]
- ELIFE [182]
- J MOL BIOL [139]
- NAT STRUCT MOL BIOL [132]
- BIORXIV [124]
- STRUCTURE [116]
- SCI ADV [100]
- CELL [99]
- J CELL BIOL [71]
- EMBO J [67]
- MOL BIOL CELL [67]
- MOL CELL [55]
- CURR BIOL [43]
- J STRUCT BIOL [41]
- NAT METHODS [36]
- J BIOL CHEM [30]
- CELL DISCOV [25]
- CELL REP [25]
- MBIO [25]
- NAT MICROBIOL [24]
- COMMUN BIOL [23]
- J BACTERIOL [22]
- LIFE SCI ALLIANCE [22]
- BIOCHIM BIOPHYS ACTA MOL CELL BIOL LIPIDS [21]
- IUCRJ [21]
- NUCLEIC ACIDS RES [19]
- CELL RES [18]
- SCI REP [18]
- J CELL SCI [17]
- NAT PLANTS [16]
- PLOS ONE [16]
- NAT CELL BIOL [15]
- OPEN BIOL [13]
- ACTA CRYSTALLOGR D STRUCT BIOL [12]
- DEV CELL [12]
- PLOS PATHOG [12]
- ACS CENT SCI [11]
- NAT CHEM BIOL [11]
- ACS NANO [10]
- ADV SCI [10]
- INT J MOL SCI [9]
- PROTEIN CELL [9]
- BIOCHEM BIOPHYS RES COMMUN [8]
- CYTOSKELETON [8]
- FRONT MOL BIOSCI [7]
- ISCIENCE [7]
- MOL MICROBIOL [7]
- PLOS BIOL [7]
- COMMUN CHEM [6]
- EMBO REP [6]
- FASEB J [6]
- FEBS LETT [6]
- PLOS GENET [6]
- PROTEIN SCI [6]
- ACTA NEUROPATHOL [5]
- BLOOD [5]
- INT J BIOL MACROMOL [5]
- J AM CHEM SOC [5]
- NAT CHEM [5]
- BIOCHEMISTRY [4]
- BIOMACROMOLECULES [4]
- FEBS J [4]
- J MICROSC [4]
- MICROSC MICROANAL [4]
- MSPHERE [4]
- NANO LETTERS [4]
- NEURON [4]
- ADV MATER [3]
- ARCH.BIOCHEM.BIOPHYS. [3]
- CHEM SCI [3]
- J VIROL [3]
- MEDRXIV [3]
- MICROBIOL SPECTR [3]
- PLOS COMPUT BIOL [3]
- PNAS NEXUS [3]
- ANGEW CHEM INT ED ENGL [2]
- BIOCHEM BIOPHYS REP [2]
- BIOPHYS J [2]
- BR.J.PHARMACOL. [2]
- CELL HOST MICROBE [2]
- CELL INSIGHT [2]
- FRONT CELL INFECT MICROBIOL [2]
- FRONT MICROBIOL [2]
- IMMUNITY [2]
- ISME J [2]
- J GEN PHYSIOL [2]
- J GENET GENOMICS [2]
- J STRUCT BIOL X [2]
- J VIS EXP [2]
- J.BIOCHEM. [2]
- METHODS [2]
- MOL PLANT [2]
- NEW PHYTOL. [2]
- PLANT CELL [2]
- PROTEINS [2]
- SSRN [2]
Software
- RELION [812]
- CRYOSPARC [572]
- IMOD [371]
- TOMOCTF [138]
- CTFFIND [123]
- PEET [81]
- DYNAMO [70]
- GCTF [47]
- FREALIGN [43]
- SPIDER [40]
- EMAN2 [38]
- IMOD, PEET [32]
- PYTOM [27]
- MATLAB [23]
- NOVASTA [21]
- IMOD, BSOFT, SPIDER, TOM, PACKAGE, MATLAB [20]
- ETOMO [18]
- IMOD, TOMO3D, PEET [18]
- TOMOALIGN [18]
- WARP [18]
- CHIMERA [17]
- EMAN [16]
- PEET, RUBY-HELIX [13]
- TOMO3D [13]
- AIMLESS [12]
- CTFPHASEFLIP [12]
- MOLREP [12]
- POINTLESS [12]
- PROTOMO [12]
- IMOD, PROTOMO [11]
- IMOD, RAPTOR, PROTOMO [11]
- XMIPP [11]
- AV3 [10]
- COOT [10]
- IMOD, BSOFT [10]
- TOM [10]
- UCSF CHIMERA [10]
- PHENIX [9]
- TOM, TOOLBOX, BSOFT, XMIPP [9]
- CISTEM [8]
- EMIRA [8]
- EMAN2, SPIDER, BESPOKE-2D-ALIGNMENT, BESPOKE-X-AND-Y-SHIFTING [6]
- SPHIRE [6]
- CTFFIND3 [5]
- IHRSR [5]
- IMOD, EMAN2 [5]
- IMOD, TOM, PACKAGE, MATLAB [5]
- IMAGIC [4]
- IMOD, TOMO3D [4]
- PRIISM/IVE [4]
- REFMAC [4]
- SPIDER, IHRSR [4]
- AMIRAMOL 3.0 [3]
- IPET [3]
- PROTOMO, IMOD [3]
- SPARX [3]
- SPIDER, WELLMAP [3]
- URO [3]
- 3DMOD [2]
- AMIRA, IMOD [2]
- CCP4 [2]
- CHIMERA, O, COOT [2]
- CRYOLO [2]
- CTFFIND4 [2]
- EM [2]
- EMAN2 SPARX [2]
- EMAN2, FREALIGN, IHRSR [2]
- IMOD, DYNAMO [2]
- IMOD, SPIDER, BSOFT [2]
- JSPR [2]
- MRC [2]
- MRC, EMAN [2]
- NOVACTF [2]
- SITUS [2]
- SPIDER, IMAGIC [2]
- UCSF CHIMERAX [2]
- URO, REFMAC, NMFF [2]
- UROX AND CHIMERA [2]
- XDS [2]
- XMIPP, IMAGIC [2]
- XSCALE [2]
- BSOFT [1]
- COAN [1]
- COW [1]
- CRYODRGN [1]
- CTFFIND3, RELION [1]
- CTFFIND3, RELION, 1.2 [1]
- CTFTILT [1]
- E2BOXER [1]
- E2HELIXBOXER.PY [1]
- EM-PACKAGE, TOM FOR MATLAB [1]
- EM3DR2, PFT2, CTFMIX [1]
- EMAN, HIMPOSE, SPIDER [1]
- EMAN, SPIDER [1]
- EMCLARITY [1]
- EMFIT [1]
- ETOMO, IMOD [1]
- ETOMO,RAPTOR [1]
- EVOL-ALIGN [1]
- FREALIGN AND SPIDER [1]
Microscope
- FEI TITAN KRIOS [1607]
- TFS KRIOS [650]
- ZEISS LIBRA120PLUS [158]
- FEI POLARA 300 [149]
- FEI TALOS ARCTICA [147]
- FEI TECNAI F20 [134]
- FEI TITAN [83]
- FEI TECNAI 20 [70]
- TFS GLACIOS [52]
- JEOL 3100FFC [51]
- FEI TECNAI F30 [43]
- JEOL 2100 [26]
- JEOL CRYO ARM 300 [23]
- FEI TECNAI 12 [21]
- FEI/PHILIPS CM200FEG [20]
- OTHER [18]
- JEOL 3200FSC [15]
- FEI/PHILIPS CM300FEG/T [14]
- FEI TECNAI ARCTICA [13]
- JEOL 2200FS [11]
- JEOL 2100F [9]
- JEOL 2010F [7]
- JEOL 3100FEF [7]
- TFS TALOS [7]
- FEI TECNAI SPIRIT [5]
- HITACHI H3000 UHVEM [4]
- JEOL 1200EX [3]
- JEOL 2200FSC [3]
- JEOL KYOTO-3000SFF [3]
- FEI/PHILIPS CM120T [2]
- FEI/PHILIPS CM200FEG/UT [2]
- FEI/PHILIPS CM300FEG/HE [2]
- JEOL 3000SFF [2]
- JEOL 3200FS [2]
- TFS TITAN THEMIS [2]
- FEI MORGAGNI [1]
- FEI/PHILIPS CM12 [1]
- FEI/PHILIPS CM200FEG/ST [1]
- FEI/PHILIPS EM400 [1]
- JEOL 100CX [1]
- JEOL 1200 [1]
- JEOL 1200EXII [1]
- JEOL 1230 [1]
- JEOL CRYO ARM 200 [1]
- TFS TUNDRA [1]
Electron Source
- FIELD EMISSION GUN [3103]
- LAB6 [252]
- TUNGSTEN HAIRPIN [13]
- OTHER [5]
Film or detector model
- GATAN K2 SUMMIT 4K X 4K [726]
- GATAN K3 6K X 4K [656]
- GATAN K3 BIOQUANTUM 6K X 4K [607]
- FEI FALCON IV 4K X 4K [233]
- GATAN ULTRASCAN 4000 4K X 4K [212]
- FEI FALCON III 4K X 4K [149]
- TVIPS TEMCAM-F416 4K X 4K [134]
- FEI FALCON II 4K X 4K [104]
- GATAN K2 QUANTUM 4K X 4K [92]
- TFS FALCON 4I 4K X 4K [65]
- GATAN ULTRASCAN 1000 2K X 2K [64]
- GATAN K3 BIOCONTINUUM 6K X 4K [50]
- KODAK SO-163 FILM [40]
- GATAN MULTISCAN [21]
- TVIPS TEMCAM-F415 4K X 4K [21]
- FEI EAGLE 4K X 4K [19]
- GATAN K2 BASE 4K X 4K [15]
- GENERIC CCD [13]
- FEI CETA 4K X 4K [12]
- GATAN K2 4K X 4K [12]
- GENERIC GATAN [10]
- TVIPS TEMCAM-F216 2K X 2K [10]
- GENERIC GATAN 2K X 2K [9]
- TVIPS TEMCAM-F224 2K X 2K [7]
- GENERIC CCD 2K X 2K [6]
- GENERIC GATAN 4K X 4K [6]
- OTHER [6]
- DECTRIS ARINA 0.2K X 0.2K [4]
- DIRECT ELECTRON DE-10 5K X 4K [4]
- GATAN K2 IS 4K X 4K [4]
- GENERIC TVIPS 4K X 4K [4]
- DIRECT ELECTRON DE-12 4K X 3K [3]
- FEI FALCON I 4K X 4K [3]
- DIRECT ELECTRON DE-20 5K X 3K [2]
- GATAN ORIUS SC200 2K X 2K [2]
- SIA 15C 3K X 3K [2]
- DIRECT ELECTRON DE-64 8K X 8K [1]
- FEI EAGLE 2K X 2K [1]
- GENERIC TVIPS [1]
- GENERIC TVIPS 2K X 2K [1]
- KODAK 4489 FILM [1]
- TVIPS TEMCAM-F816 8K X 8K [1]
EMPIAR Experiment type
- FIB-SEM [1]
EMPIAR Image category
- RECONSTRUCTED VOLUMES [1]
External links
- PDB [57]
- UniProt [52]
- PDBe-Kb [49]
- InterPro [47]
- AlphaFold DB [46]
- Pfam [46]
- Gene Ontology [41]
- ChEBI [33]
- ChEMBL [30]
- DrugBank [26]
- EMPIAR [2]
- CATH [1]
- Complex Portal [1]
- SCOP2 [1]