Edit your search query here and hit Return to execute it:
average_ccc_value:{0 TO 100}

Filter By

Current Database

  • EMDB [24792]

Current status

  • REL [24792]

Sample type

  • Protein [24440]
  • Complex [22231]
  • Ligand [15697]
  • RNA [3748]
  • DNA [2816]
  • Virus [1178]
  • Cellular component [1101]
  • Cell [279]
  • Tissue [158]
  • Sample [70]
  • Other [46]

Organism

  • Homo sapiens [9982]
  • Synthetic construct [2108]
  • Mus musculus [1599]
  • Escherichia coli [1567]
  • Severe acute respiratory syndrome coronavirus [948]
  • Saccharomyces cerevisiae [898]
  • Escherichia coli [623]
  • Rattus norvegicus [597]
  • Saccharomyces cerevisiae [480]
  • Bos taurus [425]
  • Oryctolagus cuniculus [420]
  • Human immunodeficiency virus 1 [406]
  • Arabidopsis thaliana [403]
  • Lama glama [391]
  • Sus scrofa [382]
  • Xenopus laevis [339]
  • Drosophila melanogaster [179]
  • Mycolicibacterium smegmatis [159]
  • Macaca mulatta [148]
  • Mycobacterium tuberculosis [144]
  • Influenza a virus [131]
  • Gallus gallus [124]
  • Vicugna pacos [122]
  • Escherichia coli [117]
  • Geobacillus stearothermophilus [112]
  • Staphylococcus aureus [109]
  • Thermus thermophilus [102]
  • Mycobacterium tuberculosis [99]
  • Bacillus subtilis [95]
  • Pseudomonas aeruginosa [92]
  • Danio rerio [84]
  • Pseudomonas aeruginosa [83]
  • Enterobacteria phage t4 [79]
  • Streptococcus pyogenes [77]
  • Bacillus subtilis [75]
  • Aequorea victoria [71]
  • Mycolicibacterium smegmatis [69]
  • Chaetomium thermophilum [69]
  • Caenorhabditis elegans [69]
  • Dna molecule [65]
  • Clostridioides difficile [58]
  • Polytomella sp. pringsheim 198.80 [56]
  • Monkeypox virus [54]
  • Synechocystis sp. pcc 6803 [54]
  • Chlamydomonas reinhardtii [53]
  • Tetrahymena thermophila [53]
  • Chaetomium thermophilum [53]
  • Salmonella enterica [53]
  • Plasmodium falciparum [52]
  • Klebsiella pneumoniae [52]
  • Salmonella enterica [52]
  • Enterovirus d [50]
  • Vibrio cholerae [50]
  • Escherichia phage lambda [49]
  • Adeno-associated virus [48]
  • Ovis aries [48]
  • Enterobacteria phage t4 [47]
  • Saccharolobus solfataricus [47]
  • Plasmodium falciparum [47]
  • Acinetobacter baumannii [46]
  • African swine fever virus [44]
  • Aquifex aeolicus [44]
  • Spinacia oleracea [43]
  • Escherichia coli [43]
  • Escherichia virus t7 [41]
  • Cricetulus griseus [40]
  • Oryza sativa [40]
  • Amanita phalloides [35]
  • Middle east respiratory syndrome-related coronavirus [34]
  • (no species) [33]
  • Severe acute respiratory syndrome coronavirus [33]
  • Clostridium perfringens [32]
  • Azotobacter vinelandii [32]
  • Thermus thermophilus [31]
  • Escherichia coli [31]
  • Pyrococcus furiosus [30]
  • Thermotoga maritima [30]
  • Enterovirus a [30]
  • Schizosaccharomyces pombe [30]
  • Human coronavirus hku1 [29]
  • Bacillus sp. (strain ps3) [28]
  • Nipah virus [28]
  • Legionella pneumophila [28]
  • Trichoplusia ni [28]
  • Enterovirus b [27]
  • Saccharomyces cerevisiae [27]
  • Clostridium botulinum [27]
  • Escherichia coli [27]
  • Candida albicans [27]
  • Komagataella phaffii [27]
  • Spodoptera frugiperda [27]
  • Hepatitis b virus [26]
  • Saccharolobus solfataricus [26]
  • Azotobacter vinelandii [26]
  • Caulobacter vibrioides [26]
  • Epstein-barr virus (strain gd1) [25]
  • Thermosynechococcus elongatus [25]
  • Schizosaccharomyces pombe [25]
  • Trypanosoma brucei [25]
  • Vaccinia virus [24]

EM Method

  • Single-particle [23251]
  • Helical reconstruction [1381]
  • Subtomogram averaging [149]
  • Electron Crystallography [11]

Resolution

  • < 2Å [236]
  • ≥ 2Å and < 3Å [7467]
  • ≥ 3Å and < 4Å [13420]
  • ≥ 4Å and < 5Å [2399]
  • ≥ 5Å and < 6Å [376]
  • ≥ 6Å and < 8Å [547]
  • ≥ 8Å and < 12Å [269]
  • ≥ 12Å and < 16Å [33]
  • ≥ 16Å and < 20Å [20]
  • ≥ 20Å and < 30Å [19]
  • ≥ 30Å [6]

Model molecular weight

  • 0-50 kDa [428]
  • 50-100 kDa [1631]
  • 100-250 kDa [7520]
  • 250-500 kDa [6030]
  • 500-1000 kDa [3195]
  • 1-2 MDa [1437]
  • 2-5 MDa [1544]
  • 5-10 MDa [377]
  • > 10 MDa [253]

Release Date

  • 2026 [4243]
  • 2025 [5736]
  • 2024 [4732]
  • 2023 [2495]
  • 2022 [2377]
  • 2021 [1696]
  • 2020 [1570]
  • 2019 [971]
  • 2018 [475]
  • 2017 [256]
  • 2016 [175]
  • 2015 [5]
  • 2014 [11]
  • 2013 [6]
  • 2012 [5]
  • 2011 [1]
  • 2010 [8]
  • 2009 [10]
  • 2008 [2]
  • 2007 [5]
  • 2006 [7]
  • 2005 [2]
  • 2004 [1]
  • 2003 [3]

Author by name

  • Zhang Y [933]
  • Wang Y [898]
  • Wang J [726]
  • Li Y [719]
  • Wang X [678]
  • Zhang X [678]
  • Liu Y [573]
  • Li X [569]
  • Li S [564]
  • Li Z [545]
  • Zhang Z [516]
  • Zhang J [483]
  • Li J [464]
  • Wang L [452]
  • Gao Y [447]
  • Chen Y [418]
  • Chen X [413]
  • Li H [413]
  • Liu C [392]
  • Zhang L [391]
  • Liu J [387]
  • Zhang K [381]
  • Liu S [365]
  • Wang Q [361]
  • Zhang H [347]
  • Yang Y [327]
  • Wang C [325]
  • Ward AB [325]
  • Liu Z [320]
  • Wang H [317]
  • Chen J [316]
  • Li D [316]
  • Wang S [315]
  • Chen Z [310]
  • Zhang S [309]
  • Zhao Y [299]
  • Liu X [298]
  • Liu B [287]
  • Liu L [287]
  • Shi Y [285]
  • Zhu Y [264]
  • Li M [259]
  • Zhao J [254]
  • Huang Y [253]
  • Wang M [252]
  • Xu Y [252]
  • Zhang B [250]
  • Jiang Y [245]
  • Wang Z [242]
  • Liu H [234]
  • Yang H [223]
  • Yang X [221]
  • Chen H [219]
  • Wang P [215]
  • Nureki O [213]
  • He J [207]
  • Zhao X [207]
  • Chen L [205]
  • Rao Z [205]
  • Li L [204]
  • Zhou Y [201]
  • Sun L [200]
  • Xu J [200]
  • Huang J [199]
  • Wang W [197]
  • Wu Y [195]
  • Zhou ZH [195]
  • Kwong PD [194]
  • Yang J [194]
  • Zhang C [194]
  • Wang F [193]
  • Li W [191]
  • Zhang P [191]
  • Zhang W [190]
  • Beckmann R [189]
  • Xu C [188]
  • Cheng J [186]
  • Zhou J [181]
  • Kotecha A [179]
  • Sun Y [179]
  • Chen Q [178]
  • Lu Y [178]
  • Sun J [173]
  • Zhang Q [173]
  • Cheng Y [172]
  • Li F [171]
  • Zhou Q [169]
  • Gao GF [167]
  • Wu J [164]
  • Du J [162]
  • Wang D [161]
  • Huang X [160]
  • Yu H [157]
  • Yang F [154]
  • Guo Y [153]
  • Wu C [152]
  • Zhou X [152]
  • Wu S [150]
  • Hu Y [149]
  • Li T [148]

Author by ORCID

  • Ward AB [194]
  • Kotecha A [156]
  • Kwong PD [152]
  • Nureki O [128]
  • Raunser S [126]
  • Cheng Y [125]
  • Zhou ZH [121]
  • Kobilka BK [120]
  • Gao GF [118]
  • Skiniotis G [116]
  • Rubinstein JL [113]
  • Zhang K [112]
  • Yamashita K [109]
  • Scheres SHW [107]
  • Chai P [103]
  • Zhang K [103]
  • Chiu W [102]
  • Beckmann R [100]
  • Papasergi-scott MM [97]
  • Cottrell CA [94]
  • Zheng Q [94]
  • Gao Y [93]
  • Chipman P [93]
  • Ranson NA [92]
  • Xiong X [92]
  • Gmeiner P [89]
  • Zhang P [89]
  • He F [88]
  • Goedert M [86]
  • Baker D [85]
  • Aricescu AR [85]
  • Li S [84]
  • Li H [83]
  • Korostelev AA [83]
  • Kuhlbrandt W [82]
  • Gao N [82]
  • Hilger D [81]
  • Taylor DW [81]
  • Cusack S [81]
  • Batebi H [80]
  • Panova O [80]
  • Xu HE [80]
  • Perez-hernandez G [80]
  • Hildebrand PW [80]
  • Kurumizaka H [79]
  • Kouba T [79]
  • Rao Z [79]
  • Du J [79]
  • Mckenna R [78]
  • Mills DJ [78]
  • Lea SM [77]
  • Stahlberg H [77]
  • Amunts A [77]
  • Stagno J [76]
  • Liu B [76]
  • Sobolevsky AI [74]
  • Crispin M [74]
  • Wilson DN [74]
  • Lander GC [74]
  • Malinauskas T [73]
  • Demo G [73]
  • Qi J [73]
  • Torres JL [73]
  • Degenhardt MFS [73]
  • Mietzsch M [72]
  • Nogales E [72]
  • Kollman JM [72]
  • Wang YX [72]
  • Allen JD [72]
  • Carrique L [71]
  • Wang X [71]
  • Lu W [70]
  • Deme JC [69]
  • Paulino C [68]
  • Borgnia MJ [68]
  • Hardwick SW [68]
  • Huiskonen JT [68]
  • Kishikawa JI [68]
  • Robinson CV [67]
  • He M [67]
  • Yokoyama K [66]
  • Yu EW [65]
  • Murphy BJ [65]
  • Dutzler R [65]
  • Park YJ [65]
  • Fuzik T [64]
  • Gorman J [64]
  • He J [64]
  • Sun L [63]
  • Yang J [63]
  • Hummer G [62]
  • King NP [62]
  • Zhou T [62]
  • Shirouzu M [62]
  • Xia N [62]
  • Kossiakoff AA [62]
  • Venugopal H [61]
  • Zhang Z [61]
  • Klusch N [61]
  • Plevka P [61]

Journal

  • NAT COMMUN [5234]
  • TO BE PUBLISHED [2821]
  • NATURE [1967]
  • NAT STRUCT MOL BIOL [1521]
  • PNAS [1388]
  • BIORXIV [1192]
  • SCI ADV [956]
  • SCIENCE [907]
  • MOL CELL [813]
  • CELL [760]
  • ELIFE [697]
  • NUCLEIC ACIDS RES [634]
  • STRUCTURE [565]
  • CELL REP [464]
  • COMMUN BIOL [328]
  • CELL RES [316]
  • EMBO J [315]
  • NAT CHEM BIOL [255]
  • CELL DISCOV [239]
  • ACTA CRYSTALLOGR D STRUCT BIOL [232]
  • J BIOL CHEM [229]
  • J MOL BIOL [207]
  • J VIROL [192]
  • PLOS PATHOG [189]
  • NAT MICROBIOL [167]
  • MBIO [117]
  • PROTEIN SCI [109]
  • J AM CHEM SOC [104]
  • NAT PLANTS [101]
  • CELL HOST MICROBE [87]
  • PLOS BIOL [81]
  • PROTEIN CELL [78]
  • IMMUNITY [74]
  • J STRUCT BIOL [73]
  • NEURON [73]
  • SCI REP [71]
  • LIFE SCI ALLIANCE [66]
  • VIRUSES [64]
  • NAT METHODS [63]
  • ISCIENCE [56]
  • EMBO REP [50]
  • INT J MOL SCI [48]
  • ADV SCI [45]
  • IUCRJ [44]
  • BIOCHEM BIOPHYS RES COMMUN [41]
  • COMMUN CHEM [38]
  • RES SQ [38]
  • ACTA NEUROPATHOL [36]
  • INT J BIOL MACROMOL [36]
  • J STRUCT BIOL X [36]
  • NPJ VACCINES [35]
  • PNAS NEXUS [34]
  • J CELL BIOL [32]
  • NAT CATAL [32]
  • SIGNAL TRANSDUCT TARGET THER [29]
  • J MED CHEM [28]
  • PLANT CELL [28]
  • ANGEW CHEM INT ED ENGL [27]
  • MOL PLANT [27]
  • PLANT COMMUN. [27]
  • BIOCHEMISTRY [25]
  • FEBS J [25]
  • BIOMOLECULES [24]
  • SCI IMMUNOL [24]
  • SCI TRANSL MED [24]
  • J.MOL.CELL.CARDIOL. [23]
  • BIOCHIM BIOPHYS ACTA BIOENERG [22]
  • VITA [21]
  • PLOS ONE [20]
  • RNA [20]
  • ACS NANO [19]
  • BIOCHEM J [18]
  • CELL REP MED [18]
  • NATL SCI REV [18]
  • J EXP MED [16]
  • ACS CATAL [15]
  • ACS CHEM BIOL [15]
  • DEV CELL [15]
  • BLOOD [14]
  • GENES DEV [14]
  • NAT CHEM [14]
  • ACS INFECT DIS. [13]
  • CURR BIOL [13]
  • FEBS LETT [13]
  • FUNDAM RES [13]
  • HLIFE [13]
  • SCI BULL (BEIJING) [13]
  • VIROL SIN [13]
  • ACS CENT SCI [12]
  • NAT IMMUNOL [12]
  • NAT NANOTECHNOL [12]
  • SCI SIGNAL [12]
  • FEBS OPEN BIO [11]
  • MEDCOMM (2020) [11]
  • MOL.CELL PROTEOMICS [11]
  • NANO LETTERS [11]
  • NAT NEUROSCI [11]
  • SCI CHINA LIFE SCI [11]
  • ACS PHARMACOL TRANSL SCI [10]
  • FASEB J [10]

Software

  • CRYOSPARC [8489]
  • RELION [5954]
  • CTFFIND [1019]
  • GCTF [451]
  • CISTEM [239]
  • PHENIX [231]
  • COOT [223]
  • UCSF CHIMERAX [196]
  • FREALIGN [161]
  • WARP [118]
  • UCSF CHIMERA [96]
  • SPHIRE [81]
  • CRYOLO [52]
  • SPIDER [52]
  • JSPR [47]
  • AV3 [30]
  • DYNAMO [30]
  • TOM TOOLBOX [26]
  • EMAN2 [25]
  • ISOLDE [25]
  • SIMPLE [23]
  • AUTO3DEM [18]
  • EMAN [16]
  • MATLAB [16]
  • TOPAZ [14]
  • SUBTOM [13]
  • IMAGIC [12]
  • MOTIONCORR2 [12]
  • EMREADY [11]
  • IMOD [10]
  • FOCUS [9]
  • FREALIX [9]
  • PYTOM [9]
  • URO [9]
  • IHRSR [8]
  • EPU [7]
  • J3DR [7]
  • SCIPION [7]
  • SPRING [7]
  • SPARX [6]
  • TOM [6]
  • CHIMERA [5]
  • CTFFIND3 [5]
  • JALIGN [5]
  • AIMLESS [4]
  • EMAN1 [4]
  • EMCLARITY [4]
  • IMIRS [4]
  • REFMAC [4]
  • SERIALEM [4]
  • SERVALCAT [4]
  • STOPGAP [4]
  • AMIRAFPM [3]
  • APPION [3]
  • CRYOS [3]
  • CTFFIND3, RELION [3]
  • JSPR, EMAN, EMAN2 [3]
  • MOLREP [3]
  • NAMD [3]
  • NOVACTF [3]
  • POINTLESS [3]
  • ARP/WARP [2]
  • CCP4 PACKAGE [2]
  • CRYOSMART [2]
  • DEEPEMHANCER [2]
  • DIREX [2]
  • DOCKEM [2]
  • IMOD AND IN-HOUSE PROCEDURES [2]
  • M [2]
  • MDFF [2]
  • MPSA [2]
  • MRC, AND, OWN, PROGRAMS [2]
  • PEET [2]
  • PHASER [2]
  • SITUS [2]
  • SPARX/EMAN2 [2]
  • SPIDER AND IMAGIC [2]
  • AMIRA [1]
  • APPION, CTFFIND3, FINDEM, RELION [1]
  • AUTO3DEM PO2R [1]
  • AUTO3DEM PPFT [1]
  • CNS [1]
  • COAN [1]
  • COW [1]
  • CRY [1]
  • CRYOSP [1]
  • CRYOSPA [1]
  • CTFFIND4 [1]
  • CTFFIND4, RELION [1]
  • ELITE3D [1]
  • ELITE3D, FREALIGN [1]
  • EMAN, FREALIGN [1]
  • EMAN, IMAGIC [1]
  • EMAN, MPSA [1]
  • EMAN, XMIPP, SPIDER [1]
  • EMAN2, IHRSR, SPIDER [1]
  • EMPFT EM3DR [1]
  • EMPFT, EM3DR [1]
  • FREALIGN IMIRS [1]
  • FREALIGN, EMAN2 [1]

Microscope

  • FEI TITAN KRIOS [12907]
  • TFS KRIOS [7800]
  • FEI TALOS ARCTICA [1342]
  • TFS GLACIOS [973]
  • JEOL CRYO ARM 300 [398]
  • FEI POLARA 300 [358]
  • FEI TECNAI F30 [257]
  • FEI TITAN [208]
  • FEI TECNAI ARCTICA [163]
  • TFS TALOS [94]
  • JEOL CRYO ARM 200 [57]
  • FEI TECNAI F20 [48]
  • JEOL 3200FSC [33]
  • FEI MORGAGNI [28]
  • FEI TECNAI 12 [23]
  • FEI TECNAI 20 [22]
  • TFS TITAN THEMIS [20]
  • FEI/PHILIPS CM300FEG/T [16]
  • FEI TECNAI SPIRIT [15]
  • JEOL 3200FS [7]
  • FEI/PHILIPS CM300FEG/HE [6]
  • TFS TALOS F200C [5]
  • FEI TECNAI SPHERA [3]
  • FEI/PHILIPS CM200FEG [3]
  • JEOL KYOTO-3000SFF [3]
  • FEI TECNAI 10 [2]
  • FEI/PHILIPS CM200FEG/ST [2]
  • JEOL 2200FSC [2]
  • JEOL 3000SFF [2]
  • SHUIMU TOTEM 300S [2]
  • TFS TUNDRA [2]
  • JEOL 1200EX [1]
  • JEOL 1200EXII [1]
  • JEOL 1400/HR YPS FEG [1]
  • JEOL 2010UHR [1]
  • JEOL 2100F [1]

Electron Source

  • FIELD EMISSION GUN [24544]
  • OTHER [187]
  • LAB6 [40]
  • TUNGSTEN HAIRPIN [21]

Film or detector model

  • GATAN K3 6K X 4K [7631]
  • GATAN K3 BIOQUANTUM 6K X 4K [5490]
  • GATAN K2 SUMMIT 4K X 4K [4538]
  • FEI FALCON IV 4K X 4K [3095]
  • FEI FALCON III 4K X 4K [1363]
  • GATAN K2 QUANTUM 4K X 4K [853]
  • TFS FALCON 4I 4K X 4K [687]
  • FEI FALCON II 4K X 4K [438]
  • GATAN K3 BIOCONTINUUM 6K X 4K [417]
  • GATAN K2 BASE 4K X 4K [59]
  • KODAK SO-163 FILM [46]
  • OTHER [35]
  • FEI FALCON I 4K X 4K [34]
  • DIRECT ELECTRON DE-20 5K X 3K [29]
  • DIRECT ELECTRON DE-64 8K X 8K [24]
  • DIRECT ELECTRON APOLLO 4K X 4K [23]
  • GATAN K2 IS 4K X 4K [16]
  • DIRECT ELECTRON DE-16 4K X 4K [12]
  • GATAN ULTRASCAN 4000 4K X 4K [11]
  • FEI CETA 4K X 4K [9]
  • DIRECT ELECTRON DE-10 5K X 4K [8]
  • FEI EAGLE 4K X 4K [8]
  • GATAN K2 4K X 4K [6]
  • TVIPS TEMCAM-F416 4K X 4K [6]
  • FEI EAGLE 2K X 2K [3]
  • GENERIC CCD [2]
  • DECTRIS ARINA 0.2K X 0.2K [1]
  • DECTRIS SINGLA 1K X 1K [1]
  • DIRECT ELECTRON DE-12 4K X 3K [1]
  • GATAN ULTRASCAN 10000 10K X 10K [1]

External links

  • PDB [22482]
  • UniProt [21439]
  • PDBe-Kb [19614]
  • AlphaFold DB [19021]
  • InterPro [17873]
  • Gene Ontology [17464]
  • Pfam [16090]
  • ChEBI [13111]
  • ChEMBL [11746]
  • DrugBank [10789]
  • Complex Portal [5731]
  • EMPIAR [2292]
  • SCOP2 [341]
  • CATH [253]
Sort by: Download
Showing 1 - 10 of 24792. Page 1 of 2480
Display:
Statistics
×

Download


Preview 10 entries View All Download file
EMD-47384
Download Map
3D View
Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying an E-tRNA
CryoEM
Release date: Sept. 2, 2026
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9e16
Q-score: 0.333
Similar entry percentile: 4%

Majumdar S, Li Y, Manjari SR, Gamper HB, Hou YM, Banavali NK, Ojha AK, Agrawal RK

bioRxiv (2024) [ DOI: doi:10.1101/2024.11.25.625233 ]

EMD-47419
Download Map
3D View
Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit
CryoEM
Release date: Sept. 2, 2026
Resolution: 2.39 Å
EM Method: Single-particle
Fitted PDBs: 9e1s
Q-score: 0.333
Similar entry percentile: 2%

Majumdar S, Li Y, Manjari SR, Gamper HB, Hou YM, Banavali NK, Ojha AK, Agrawal RK

bioRxiv (2024) [ DOI: doi:10.1101/2024.11.25.625233 ]

EMD-47876
Download Map
3D View
Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome
CryoEM
Release date: Sept. 2, 2026
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9ebb
Q-score: 0.512
Similar entry percentile: 43%

Majumdar S, Li Y, Manjari SR, Gamper HB, Hou YM, Banavali NK, Ojha AK, Agrawal RK

bioRxiv (2024) [ DOI: doi:10.1101/2024.11.25.625233 ]

EMD-47899
Download Map
3D View
Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA fMet and deacylated tRNA at ribosome P and E sites.
CryoEM
Release date: Sept. 2, 2026
Resolution: 3.29 Å
EM Method: Single-particle
Fitted PDBs: 9ec3
Q-score: 0.461
Similar entry percentile: 48%

Majumdar S, Li Y, Manjari SR, Gamper HB, Hou YM, Banavali NK, Ojha AK, Agrawal RK

bioRxiv (2024) [ DOI: doi:10.1101/2024.11.25.625233 ]

EMD-49433
Download Map
3D View
The cryo-EM structure of the periplasmic chaperone Skp from Neisseria meningitidis
CryoEM
Release date: Sept. 2, 2026
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 9nhx
Q-score: 0.164
Similar entry percentile: 9%

Dubey S, Noinaj N

To Be Published

EMD-49747
Download Map
3D View
MPXV replisome bound to ssDNA
CryoEM
Release date: Sept. 2, 2026
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 9nsp
Q-score: 0.152
Similar entry percentile: 4%

Yu Z, Sathyanarayana P, Tan JMJT, Hu S, Fan X, Gao A, Kranzusch PJ, Loparo JJ, Abraham J

Nature (2026) [ DOI: doi:10.1038/s41586-026-10937-2 ]

EMD-52854
Download Map
3D View
Mouse teneurin-3 A1B1 isoform; microphthalmia-associated R2579W mutant; compact dimer conformation
CryoEM
Release date: Sept. 2, 2026
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9igs
Q-score: 0.495
Similar entry percentile: 52%

Gogou C, Meijer DH

To Be Published

EMD-54808
Download Map
3D View
mechanosensitive channel MscS from Francisella tularensis in nanodiscs
CryoEM
Release date: Sept. 2, 2026
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9sef
Q-score: 0.475
Similar entry percentile: 57%

Rasmussen A, Hemmelmann N, Bahner J, Hove TT, Flegler VJ, Kraft C, Hedrich R, Rasmussen T, Bottcher B

To Be Published

EMD-54810
Download Map
3D View
mechanosensitive channel MscS from Francisella tularensis, mutant F108A
CryoEM
Release date: Sept. 2, 2026
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 9seh
Q-score: 0.528
Similar entry percentile: 52%

Rasmussen A, Hemmelmann N, Bahner J, Hove TT, Flegler VJ, Kraft C, Hedrich R, Rasmussen T, Bottcher B

To Be Published

EMD-54813
Download Map
3D View
Prefusion-stabilized Hendra virus fusion protein in complex with inhibitory nanobody F130
CryoEM
Release date: Sept. 2, 2026
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 9sf4
Q-score: 0.639
Similar entry percentile: 92%

Kralova A, Hanke L

To Be Published

Sort by: Download
Showing 1 - 10 of 24792. Page 1 of 2480
Display:
Statistics
×

Download


Preview 10 entries View All Download file

Filter By

Current Database

  • EMDB [24792]

Current status

  • REL [24792]

Sample type

  • Protein [24440]
  • Complex [22231]
  • Ligand [15697]
  • RNA [3748]
  • DNA [2816]
  • Virus [1178]
  • Cellular component [1101]
  • Cell [279]
  • Tissue [158]
  • Sample [70]
  • Other [46]

Organism

  • Homo sapiens [9982]
  • Synthetic construct [2108]
  • Mus musculus [1599]
  • Escherichia coli [1567]
  • Severe acute respiratory syndrome coronavirus [948]
  • Saccharomyces cerevisiae [898]
  • Escherichia coli [623]
  • Rattus norvegicus [597]
  • Saccharomyces cerevisiae [480]
  • Bos taurus [425]
  • Oryctolagus cuniculus [420]
  • Human immunodeficiency virus 1 [406]
  • Arabidopsis thaliana [403]
  • Lama glama [391]
  • Sus scrofa [382]
  • Xenopus laevis [339]
  • Drosophila melanogaster [179]
  • Mycolicibacterium smegmatis [159]
  • Macaca mulatta [148]
  • Mycobacterium tuberculosis [144]
  • Influenza a virus [131]
  • Gallus gallus [124]
  • Vicugna pacos [122]
  • Escherichia coli [117]
  • Geobacillus stearothermophilus [112]
  • Staphylococcus aureus [109]
  • Thermus thermophilus [102]
  • Mycobacterium tuberculosis [99]
  • Bacillus subtilis [95]
  • Pseudomonas aeruginosa [92]
  • Danio rerio [84]
  • Pseudomonas aeruginosa [83]
  • Enterobacteria phage t4 [79]
  • Streptococcus pyogenes [77]
  • Bacillus subtilis [75]
  • Aequorea victoria [71]
  • Mycolicibacterium smegmatis [69]
  • Chaetomium thermophilum [69]
  • Caenorhabditis elegans [69]
  • Dna molecule [65]
  • Clostridioides difficile [58]
  • Polytomella sp. pringsheim 198.80 [56]
  • Monkeypox virus [54]
  • Synechocystis sp. pcc 6803 [54]
  • Chlamydomonas reinhardtii [53]
  • Tetrahymena thermophila [53]
  • Chaetomium thermophilum [53]
  • Salmonella enterica [53]
  • Plasmodium falciparum [52]
  • Klebsiella pneumoniae [52]
  • Salmonella enterica [52]
  • Enterovirus d [50]
  • Vibrio cholerae [50]
  • Escherichia phage lambda [49]
  • Adeno-associated virus [48]
  • Ovis aries [48]
  • Enterobacteria phage t4 [47]
  • Saccharolobus solfataricus [47]
  • Plasmodium falciparum [47]
  • Acinetobacter baumannii [46]
  • African swine fever virus [44]
  • Aquifex aeolicus [44]
  • Spinacia oleracea [43]
  • Escherichia coli [43]
  • Escherichia virus t7 [41]
  • Cricetulus griseus [40]
  • Oryza sativa [40]
  • Amanita phalloides [35]
  • Middle east respiratory syndrome-related coronavirus [34]
  • (no species) [33]
  • Severe acute respiratory syndrome coronavirus [33]
  • Clostridium perfringens [32]
  • Azotobacter vinelandii [32]
  • Thermus thermophilus [31]
  • Escherichia coli [31]
  • Pyrococcus furiosus [30]
  • Thermotoga maritima [30]
  • Enterovirus a [30]
  • Schizosaccharomyces pombe [30]
  • Human coronavirus hku1 [29]
  • Bacillus sp. (strain ps3) [28]
  • Nipah virus [28]
  • Legionella pneumophila [28]
  • Trichoplusia ni [28]
  • Enterovirus b [27]
  • Saccharomyces cerevisiae [27]
  • Clostridium botulinum [27]
  • Escherichia coli [27]
  • Candida albicans [27]
  • Komagataella phaffii [27]
  • Spodoptera frugiperda [27]
  • Hepatitis b virus [26]
  • Saccharolobus solfataricus [26]
  • Azotobacter vinelandii [26]
  • Caulobacter vibrioides [26]
  • Epstein-barr virus (strain gd1) [25]
  • Thermosynechococcus elongatus [25]
  • Schizosaccharomyces pombe [25]
  • Trypanosoma brucei [25]
  • Vaccinia virus [24]

EM Method

  • Single-particle [23251]
  • Helical reconstruction [1381]
  • Subtomogram averaging [149]
  • Electron Crystallography [11]

Resolution

  • < 2Å [236]
  • ≥ 2Å and < 3Å [7467]
  • ≥ 3Å and < 4Å [13420]
  • ≥ 4Å and < 5Å [2399]
  • ≥ 5Å and < 6Å [376]
  • ≥ 6Å and < 8Å [547]
  • ≥ 8Å and < 12Å [269]
  • ≥ 12Å and < 16Å [33]
  • ≥ 16Å and < 20Å [20]
  • ≥ 20Å and < 30Å [19]
  • ≥ 30Å [6]

Model molecular weight

  • 0-50 kDa [428]
  • 50-100 kDa [1631]
  • 100-250 kDa [7520]
  • 250-500 kDa [6030]
  • 500-1000 kDa [3195]
  • 1-2 MDa [1437]
  • 2-5 MDa [1544]
  • 5-10 MDa [377]
  • > 10 MDa [253]

Release Date

  • 2026 [4243]
  • 2025 [5736]
  • 2024 [4732]
  • 2023 [2495]
  • 2022 [2377]
  • 2021 [1696]
  • 2020 [1570]
  • 2019 [971]
  • 2018 [475]
  • 2017 [256]
  • 2016 [175]
  • 2015 [5]
  • 2014 [11]
  • 2013 [6]
  • 2012 [5]
  • 2011 [1]
  • 2010 [8]
  • 2009 [10]
  • 2008 [2]
  • 2007 [5]
  • 2006 [7]
  • 2005 [2]
  • 2004 [1]
  • 2003 [3]

Author by name

  • Zhang Y [933]
  • Wang Y [898]
  • Wang J [726]
  • Li Y [719]
  • Wang X [678]
  • Zhang X [678]
  • Liu Y [573]
  • Li X [569]
  • Li S [564]
  • Li Z [545]
  • Zhang Z [516]
  • Zhang J [483]
  • Li J [464]
  • Wang L [452]
  • Gao Y [447]
  • Chen Y [418]
  • Chen X [413]
  • Li H [413]
  • Liu C [392]
  • Zhang L [391]
  • Liu J [387]
  • Zhang K [381]
  • Liu S [365]
  • Wang Q [361]
  • Zhang H [347]
  • Yang Y [327]
  • Wang C [325]
  • Ward AB [325]
  • Liu Z [320]
  • Wang H [317]
  • Chen J [316]
  • Li D [316]
  • Wang S [315]
  • Chen Z [310]
  • Zhang S [309]
  • Zhao Y [299]
  • Liu X [298]
  • Liu B [287]
  • Liu L [287]
  • Shi Y [285]
  • Zhu Y [264]
  • Li M [259]
  • Zhao J [254]
  • Huang Y [253]
  • Wang M [252]
  • Xu Y [252]
  • Zhang B [250]
  • Jiang Y [245]
  • Wang Z [242]
  • Liu H [234]
  • Yang H [223]
  • Yang X [221]
  • Chen H [219]
  • Wang P [215]
  • Nureki O [213]
  • He J [207]
  • Zhao X [207]
  • Chen L [205]
  • Rao Z [205]
  • Li L [204]
  • Zhou Y [201]
  • Sun L [200]
  • Xu J [200]
  • Huang J [199]
  • Wang W [197]
  • Wu Y [195]
  • Zhou ZH [195]
  • Kwong PD [194]
  • Yang J [194]
  • Zhang C [194]
  • Wang F [193]
  • Li W [191]
  • Zhang P [191]
  • Zhang W [190]
  • Beckmann R [189]
  • Xu C [188]
  • Cheng J [186]
  • Zhou J [181]
  • Kotecha A [179]
  • Sun Y [179]
  • Chen Q [178]
  • Lu Y [178]
  • Sun J [173]
  • Zhang Q [173]
  • Cheng Y [172]
  • Li F [171]
  • Zhou Q [169]
  • Gao GF [167]
  • Wu J [164]
  • Du J [162]
  • Wang D [161]
  • Huang X [160]
  • Yu H [157]
  • Yang F [154]
  • Guo Y [153]
  • Wu C [152]
  • Zhou X [152]
  • Wu S [150]
  • Hu Y [149]
  • Li T [148]

Author by ORCID

  • Ward AB [194]
  • Kotecha A [156]
  • Kwong PD [152]
  • Nureki O [128]
  • Raunser S [126]
  • Cheng Y [125]
  • Zhou ZH [121]
  • Kobilka BK [120]
  • Gao GF [118]
  • Skiniotis G [116]
  • Rubinstein JL [113]
  • Zhang K [112]
  • Yamashita K [109]
  • Scheres SHW [107]
  • Chai P [103]
  • Zhang K [103]
  • Chiu W [102]
  • Beckmann R [100]
  • Papasergi-scott MM [97]
  • Cottrell CA [94]
  • Zheng Q [94]
  • Gao Y [93]
  • Chipman P [93]
  • Ranson NA [92]
  • Xiong X [92]
  • Gmeiner P [89]
  • Zhang P [89]
  • He F [88]
  • Goedert M [86]
  • Baker D [85]
  • Aricescu AR [85]
  • Li S [84]
  • Li H [83]
  • Korostelev AA [83]
  • Kuhlbrandt W [82]
  • Gao N [82]
  • Hilger D [81]
  • Taylor DW [81]
  • Cusack S [81]
  • Batebi H [80]
  • Panova O [80]
  • Xu HE [80]
  • Perez-hernandez G [80]
  • Hildebrand PW [80]
  • Kurumizaka H [79]
  • Kouba T [79]
  • Rao Z [79]
  • Du J [79]
  • Mckenna R [78]
  • Mills DJ [78]
  • Lea SM [77]
  • Stahlberg H [77]
  • Amunts A [77]
  • Stagno J [76]
  • Liu B [76]
  • Sobolevsky AI [74]
  • Crispin M [74]
  • Wilson DN [74]
  • Lander GC [74]
  • Malinauskas T [73]
  • Demo G [73]
  • Qi J [73]
  • Torres JL [73]
  • Degenhardt MFS [73]
  • Mietzsch M [72]
  • Nogales E [72]
  • Kollman JM [72]
  • Wang YX [72]
  • Allen JD [72]
  • Carrique L [71]
  • Wang X [71]
  • Lu W [70]
  • Deme JC [69]
  • Paulino C [68]
  • Borgnia MJ [68]
  • Hardwick SW [68]
  • Huiskonen JT [68]
  • Kishikawa JI [68]
  • Robinson CV [67]
  • He M [67]
  • Yokoyama K [66]
  • Yu EW [65]
  • Murphy BJ [65]
  • Dutzler R [65]
  • Park YJ [65]
  • Fuzik T [64]
  • Gorman J [64]
  • He J [64]
  • Sun L [63]
  • Yang J [63]
  • Hummer G [62]
  • King NP [62]
  • Zhou T [62]
  • Shirouzu M [62]
  • Xia N [62]
  • Kossiakoff AA [62]
  • Venugopal H [61]
  • Zhang Z [61]
  • Klusch N [61]
  • Plevka P [61]

Journal

  • NAT COMMUN [5234]
  • TO BE PUBLISHED [2821]
  • NATURE [1967]
  • NAT STRUCT MOL BIOL [1521]
  • PNAS [1388]
  • BIORXIV [1192]
  • SCI ADV [956]
  • SCIENCE [907]
  • MOL CELL [813]
  • CELL [760]
  • ELIFE [697]
  • NUCLEIC ACIDS RES [634]
  • STRUCTURE [565]
  • CELL REP [464]
  • COMMUN BIOL [328]
  • CELL RES [316]
  • EMBO J [315]
  • NAT CHEM BIOL [255]
  • CELL DISCOV [239]
  • ACTA CRYSTALLOGR D STRUCT BIOL [232]
  • J BIOL CHEM [229]
  • J MOL BIOL [207]
  • J VIROL [192]
  • PLOS PATHOG [189]
  • NAT MICROBIOL [167]
  • MBIO [117]
  • PROTEIN SCI [109]
  • J AM CHEM SOC [104]
  • NAT PLANTS [101]
  • CELL HOST MICROBE [87]
  • PLOS BIOL [81]
  • PROTEIN CELL [78]
  • IMMUNITY [74]
  • J STRUCT BIOL [73]
  • NEURON [73]
  • SCI REP [71]
  • LIFE SCI ALLIANCE [66]
  • VIRUSES [64]
  • NAT METHODS [63]
  • ISCIENCE [56]
  • EMBO REP [50]
  • INT J MOL SCI [48]
  • ADV SCI [45]
  • IUCRJ [44]
  • BIOCHEM BIOPHYS RES COMMUN [41]
  • COMMUN CHEM [38]
  • RES SQ [38]
  • ACTA NEUROPATHOL [36]
  • INT J BIOL MACROMOL [36]
  • J STRUCT BIOL X [36]
  • NPJ VACCINES [35]
  • PNAS NEXUS [34]
  • J CELL BIOL [32]
  • NAT CATAL [32]
  • SIGNAL TRANSDUCT TARGET THER [29]
  • J MED CHEM [28]
  • PLANT CELL [28]
  • ANGEW CHEM INT ED ENGL [27]
  • MOL PLANT [27]
  • PLANT COMMUN. [27]
  • BIOCHEMISTRY [25]
  • FEBS J [25]
  • BIOMOLECULES [24]
  • SCI IMMUNOL [24]
  • SCI TRANSL MED [24]
  • J.MOL.CELL.CARDIOL. [23]
  • BIOCHIM BIOPHYS ACTA BIOENERG [22]
  • VITA [21]
  • PLOS ONE [20]
  • RNA [20]
  • ACS NANO [19]
  • BIOCHEM J [18]
  • CELL REP MED [18]
  • NATL SCI REV [18]
  • J EXP MED [16]
  • ACS CATAL [15]
  • ACS CHEM BIOL [15]
  • DEV CELL [15]
  • BLOOD [14]
  • GENES DEV [14]
  • NAT CHEM [14]
  • ACS INFECT DIS. [13]
  • CURR BIOL [13]
  • FEBS LETT [13]
  • FUNDAM RES [13]
  • HLIFE [13]
  • SCI BULL (BEIJING) [13]
  • VIROL SIN [13]
  • ACS CENT SCI [12]
  • NAT IMMUNOL [12]
  • NAT NANOTECHNOL [12]
  • SCI SIGNAL [12]
  • FEBS OPEN BIO [11]
  • MEDCOMM (2020) [11]
  • MOL.CELL PROTEOMICS [11]
  • NANO LETTERS [11]
  • NAT NEUROSCI [11]
  • SCI CHINA LIFE SCI [11]
  • ACS PHARMACOL TRANSL SCI [10]
  • FASEB J [10]

Software

  • CRYOSPARC [8489]
  • RELION [5954]
  • CTFFIND [1019]
  • GCTF [451]
  • CISTEM [239]
  • PHENIX [231]
  • COOT [223]
  • UCSF CHIMERAX [196]
  • FREALIGN [161]
  • WARP [118]
  • UCSF CHIMERA [96]
  • SPHIRE [81]
  • CRYOLO [52]
  • SPIDER [52]
  • JSPR [47]
  • AV3 [30]
  • DYNAMO [30]
  • TOM TOOLBOX [26]
  • EMAN2 [25]
  • ISOLDE [25]
  • SIMPLE [23]
  • AUTO3DEM [18]
  • EMAN [16]
  • MATLAB [16]
  • TOPAZ [14]
  • SUBTOM [13]
  • IMAGIC [12]
  • MOTIONCORR2 [12]
  • EMREADY [11]
  • IMOD [10]
  • FOCUS [9]
  • FREALIX [9]
  • PYTOM [9]
  • URO [9]
  • IHRSR [8]
  • EPU [7]
  • J3DR [7]
  • SCIPION [7]
  • SPRING [7]
  • SPARX [6]
  • TOM [6]
  • CHIMERA [5]
  • CTFFIND3 [5]
  • JALIGN [5]
  • AIMLESS [4]
  • EMAN1 [4]
  • EMCLARITY [4]
  • IMIRS [4]
  • REFMAC [4]
  • SERIALEM [4]
  • SERVALCAT [4]
  • STOPGAP [4]
  • AMIRAFPM [3]
  • APPION [3]
  • CRYOS [3]
  • CTFFIND3, RELION [3]
  • JSPR, EMAN, EMAN2 [3]
  • MOLREP [3]
  • NAMD [3]
  • NOVACTF [3]
  • POINTLESS [3]
  • ARP/WARP [2]
  • CCP4 PACKAGE [2]
  • CRYOSMART [2]
  • DEEPEMHANCER [2]
  • DIREX [2]
  • DOCKEM [2]
  • IMOD AND IN-HOUSE PROCEDURES [2]
  • M [2]
  • MDFF [2]
  • MPSA [2]
  • MRC, AND, OWN, PROGRAMS [2]
  • PEET [2]
  • PHASER [2]
  • SITUS [2]
  • SPARX/EMAN2 [2]
  • SPIDER AND IMAGIC [2]
  • AMIRA [1]
  • APPION, CTFFIND3, FINDEM, RELION [1]
  • AUTO3DEM PO2R [1]
  • AUTO3DEM PPFT [1]
  • CNS [1]
  • COAN [1]
  • COW [1]
  • CRY [1]
  • CRYOSP [1]
  • CRYOSPA [1]
  • CTFFIND4 [1]
  • CTFFIND4, RELION [1]
  • ELITE3D [1]
  • ELITE3D, FREALIGN [1]
  • EMAN, FREALIGN [1]
  • EMAN, IMAGIC [1]
  • EMAN, MPSA [1]
  • EMAN, XMIPP, SPIDER [1]
  • EMAN2, IHRSR, SPIDER [1]
  • EMPFT EM3DR [1]
  • EMPFT, EM3DR [1]
  • FREALIGN IMIRS [1]
  • FREALIGN, EMAN2 [1]

Microscope

  • FEI TITAN KRIOS [12907]
  • TFS KRIOS [7800]
  • FEI TALOS ARCTICA [1342]
  • TFS GLACIOS [973]
  • JEOL CRYO ARM 300 [398]
  • FEI POLARA 300 [358]
  • FEI TECNAI F30 [257]
  • FEI TITAN [208]
  • FEI TECNAI ARCTICA [163]
  • TFS TALOS [94]
  • JEOL CRYO ARM 200 [57]
  • FEI TECNAI F20 [48]
  • JEOL 3200FSC [33]
  • FEI MORGAGNI [28]
  • FEI TECNAI 12 [23]
  • FEI TECNAI 20 [22]
  • TFS TITAN THEMIS [20]
  • FEI/PHILIPS CM300FEG/T [16]
  • FEI TECNAI SPIRIT [15]
  • JEOL 3200FS [7]
  • FEI/PHILIPS CM300FEG/HE [6]
  • TFS TALOS F200C [5]
  • FEI TECNAI SPHERA [3]
  • FEI/PHILIPS CM200FEG [3]
  • JEOL KYOTO-3000SFF [3]
  • FEI TECNAI 10 [2]
  • FEI/PHILIPS CM200FEG/ST [2]
  • JEOL 2200FSC [2]
  • JEOL 3000SFF [2]
  • SHUIMU TOTEM 300S [2]
  • TFS TUNDRA [2]
  • JEOL 1200EX [1]
  • JEOL 1200EXII [1]
  • JEOL 1400/HR YPS FEG [1]
  • JEOL 2010UHR [1]
  • JEOL 2100F [1]

Electron Source

  • FIELD EMISSION GUN [24544]
  • OTHER [187]
  • LAB6 [40]
  • TUNGSTEN HAIRPIN [21]

Film or detector model

  • GATAN K3 6K X 4K [7631]
  • GATAN K3 BIOQUANTUM 6K X 4K [5490]
  • GATAN K2 SUMMIT 4K X 4K [4538]
  • FEI FALCON IV 4K X 4K [3095]
  • FEI FALCON III 4K X 4K [1363]
  • GATAN K2 QUANTUM 4K X 4K [853]
  • TFS FALCON 4I 4K X 4K [687]
  • FEI FALCON II 4K X 4K [438]
  • GATAN K3 BIOCONTINUUM 6K X 4K [417]
  • GATAN K2 BASE 4K X 4K [59]
  • KODAK SO-163 FILM [46]
  • OTHER [35]
  • FEI FALCON I 4K X 4K [34]
  • DIRECT ELECTRON DE-20 5K X 3K [29]
  • DIRECT ELECTRON DE-64 8K X 8K [24]
  • DIRECT ELECTRON APOLLO 4K X 4K [23]
  • GATAN K2 IS 4K X 4K [16]
  • DIRECT ELECTRON DE-16 4K X 4K [12]
  • GATAN ULTRASCAN 4000 4K X 4K [11]
  • FEI CETA 4K X 4K [9]
  • DIRECT ELECTRON DE-10 5K X 4K [8]
  • FEI EAGLE 4K X 4K [8]
  • GATAN K2 4K X 4K [6]
  • TVIPS TEMCAM-F416 4K X 4K [6]
  • FEI EAGLE 2K X 2K [3]
  • GENERIC CCD [2]
  • DECTRIS ARINA 0.2K X 0.2K [1]
  • DECTRIS SINGLA 1K X 1K [1]
  • DIRECT ELECTRON DE-12 4K X 3K [1]
  • GATAN ULTRASCAN 10000 10K X 10K [1]

External links

  • PDB [22482]
  • UniProt [21439]
  • PDBe-Kb [19614]
  • AlphaFold DB [19021]
  • InterPro [17873]
  • Gene Ontology [17464]
  • Pfam [16090]
  • ChEBI [13111]
  • ChEMBL [11746]
  • DrugBank [10789]
  • Complex Portal [5731]
  • EMPIAR [2292]
  • SCOP2 [341]
  • CATH [253]