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author:"Sutherland LL"

Filter By

Current Database

  • EMDB [32]

Current status

  • REL [32]

Sample type

  • Complex [32]
  • Protein [6]
  • Ligand [5]

Organism

  • Severe acute respiratory syndrome coronavirus [32]
  • Homo sapiens [12]

EM Method

  • Single-particle [32]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [5]
  • ≥ 8Å and < 12Å [3]
  • ≥ 12Å and < 16Å [4]
  • ≥ 16Å and < 20Å [19]

Model molecular weight

  • 50-100 kDa [1]
  • 250-500 kDa [1]
  • 500-1000 kDa [4]

Release Date

  • 2023 [1]
  • 2021 [5]
  • 2020 [26]

Author by name

  • Acharya P [32]
  • Andersen H [32]
  • Baric RS [32]
  • Barr M [32]
  • Bock KW [32]
  • Cain DW [32]
  • Demarco CT [32]
  • Denny TN [32]
  • Edwards RJ [32]
  • Haynes BF [32]
  • Lee E [32]
  • Lewis MG [32]
  • Li D [32]
  • Lu X [32]
  • Manne K [32]
  • Mansouri K [32]
  • Martinez DR [32]
  • Minai M [32]
  • Montefiori DC [32]
  • Moore IN [32]
  • Nagata BM [32]
  • Parks R [32]
  • Saunders KO [32]
  • Schafer A [32]
  • Seder R [32]
  • Sempowski GD [32]
  • Stalls V [32]
  • Sutherland LL [32]
  • Alam SM [31]
  • Cai F [31]
  • Caradonna TM [31]
  • Cronin K [31]
  • Deyton M [31]
  • Feldman J [31]
  • Foulger A [31]
  • Gee-lai V [31]
  • Gobeil SMC [31]
  • Graham BS [31]
  • Hauser BM [31]
  • Hernandez GE [31]
  • Janowska K [31]
  • Jiang C [31]
  • Kopp M [31]
  • Kwong PD [31]
  • Macintyre AN [31]
  • Mascola JR [31]
  • Mcdanal C [31]
  • Moody MA [31]
  • Perez LG [31]
  • Petzold EW [31]
  • Rountree W [31]
  • Sanzone A [31]
  • Schmidt AG [31]
  • Scobey TD [31]
  • Stover E [31]
  • Teng IT [31]
  • Tilahun K [31]
  • Tse LV [31]
  • Von Holle T [31]
  • Wang Y [31]
  • Wiehe K [31]
  • Woods CW [31]
  • Zhou T [31]
  • Oguin 3Rd Th [5]
  • Barbosa C [1]
  • Beck WE [1]
  • Eaton A [1]
  • Gobeil S [1]
  • Golding H [1]
  • Henderson R [1]
  • Khurana S [1]
  • Malewana RD [1]
  • May A [1]
  • May AJ [1]
  • Muramatsu H [1]
  • Newman A [1]
  • Oguin TH [1]
  • Pardi N [1]
  • Santra S [1]
  • Tam Y [1]
  • Tang J [1]
  • Weissman D [1]

Author by ORCID

  • Gobeil SMC [31]
  • Hauser BM [31]
  • Mansouri K [30]
  • Caradonna TM [30]
  • Macintyre AN [30]
  • Sempowski GD [30]
  • Tilahun K [30]
  • Kwong PD [30]
  • Edwards RJ [30]
  • Oguin 3Rd Th [4]
  • Saunders KO [1]
  • Graham BS [1]
  • Malewana RD [1]

Journal

  • BIORXIV [32]
  • CELL [30]

Software

  • CTFFIND [26]
  • RELION [26]
  • CRYOSPARC [4]

Microscope

  • FEI/PHILIPS EM420 [26]
  • FEI TITAN KRIOS [5]
  • TFS KRIOS [1]

Electron Source

  • LAB6 [26]
  • FIELD EMISSION GUN [6]

Film or detector model

  • OTHER [26]
  • GATAN K3 6K X 4K [6]

External links

  • Complex Portal [6]
  • InterPro [6]
  • PDB [6]
  • PDBe-Kb [6]
  • Pfam [6]
  • UniProt [6]
  • AlphaFold DB [5]
  • ChEBI [5]
  • ChEMBL [5]
  • Gene Ontology [5]
Sort by: Download
Showing 1 - 10 of 32. Page 1 of 4
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EMD-27703
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3D View
Structure of RBD directed antibody DH1047 in complex with SARS-CoV-2 spike: Local refinement of RBD-Fab interace
Release date: Aug. 2, 2023
Resolution: 3.77 Å
EM Method: Single-particle
Fitted PDBs: 8dtk
Q-score: 0.437

Malewana RD, Stalls V, May A, Lu X, Martinez DR, Schafer A, Li D, Barr M, Sutherland LL, Lee E, Parks R, Beck WE, Newman A, Bock KW, Minai M, Nagata BM, DeMarco CT, Denny TN, Oguin 3rd TH, Rountree W, Wang Y, Mansouri K, Edwards RJ, Sempowski GD, Eaton A, Muramatsu H, Henderson R, Tam Y, Barbosa C, Tang J, Cain DW, Santra S, Moore IN, Andersen H, Lewis MG, Golding H, Seder R, Khurana S, Montefiori DC, Pardi N, Weissman D, Baric RS, Acharya P, Haynes BF, Saunders KO

bioRxiv (2023) [ DOI: doi:10.1101/2023.12.18.572191 Pubmed: 38187726 ]

EMD-23400
Download Map
3D View
SARS-CoV-2 Spike Protein Trimer bound to DH1043 fab
Release date: March 31, 2021
Resolution: 3.66 Å
EM Method: Single-particle
Fitted PDBs: 7ljr
Q-score: 0.35

Li D, Edwards RJ, Manne K, Martinez DR, Schafer A, Alam SM, Wiehe K, Lu X, Parks R, Sutherland LL, Oguin TH, McDanal C, Perez LG, Mansouri K, Gobeil SMC, Janowska K, Stalls V, Kopp M, Cai F, Lee E, Foulger A, Hernandez GE, Sanzone A, Tilahun K, Jiang C, Tse LV, Bock KW, Minai M, Nagata BM, Cronin K, Gee-Lai V, Deyton M, Barr M, Von Holle T, Macintyre AN, Stover E, Feldman J, Hauser BM, Caradonna TM, Scobey TD, Moody MA, Cain DW, DeMarco CT, Denny TN, Woods CW, Petzold EW, Schmidt AG, Teng IT, Zhou T, Kwong PD, Mascola JR, Graham BS, Moore IN, Seder R, Andersen H, Lewis MG, Montefiori DC, Sempowski GD, Baric RS, Acharya P, Haynes BF, Saunders KO

bioRxiv (2021) [ DOI: doi:10.1101/2020.12.31.424729 Pubmed: 33442694 ]

EMD-23246
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CryoEM map of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1041
Release date: March 17, 2021
Resolution: 3.42 Å
EM Method: Single-particle
Fitted PDBs: 7laa
Q-score: 0.416

Li D, Edwards RJ, Manne K, Martinez DR, Schafer A, Alam SM, Wiehe K, Lu X, Parks R, Sutherland LL, Oguin 3rd TH, McDanal C, Perez LG, Mansouri K, Gobeil SMC, Janowska K, Stalls V, Kopp M, Cai F, Lee E, Foulger A, Hernandez GE, Sanzone A, Tilahun K, Jiang C, Tse LV, Bock KW, Minai M, Nagata BM, Cronin K, Gee-Lai V, Deyton M, Barr M, Von Holle T, Macintyre AN, Stover E, Feldman J, Hauser BM, Caradonna TM, Scobey TD, Rountree W, Wang Y, Moody MA, Cain DW, DeMarco CT, Denny TN, Woods CW, Petzold EW, Schmidt AG, Teng IT, Zhou T, Kwong PD, Mascola JR, Graham BS, Moore IN, Seder R, Andersen H, Lewis MG, Montefiori DC, Sempowski GD, Baric RS, Acharya P, Haynes BF, Saunders KO

Cell (2021) 184 pp. 4203- [ DOI: doi:10.1016/j.cell.2021.06.021 Pubmed: 34242577 ]

EMD-23248
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CryoEM map of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1052
Release date: March 10, 2021
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 7lab
Q-score: 0.429

Li D, Edwards RJ, Manne K, Martinez DR, Schafer A, Alam SM, Wiehe K, Lu X, Parks R, Sutherland LL, Oguin 3rd TH, McDanal C, Perez LG, Mansouri K, Gobeil SMC, Janowska K, Stalls V, Kopp M, Cai F, Lee E, Foulger A, Hernandez GE, Sanzone A, Tilahun K, Jiang C, Tse LV, Bock KW, Minai M, Nagata BM, Cronin K, Gee-Lai V, Deyton M, Barr M, Von Holle T, Macintyre AN, Stover E, Feldman J, Hauser BM, Caradonna TM, Scobey TD, Rountree W, Wang Y, Moody MA, Cain DW, DeMarco CT, Denny TN, Woods CW, Petzold EW, Schmidt AG, Teng IT, Zhou T, Kwong PD, Mascola JR, Graham BS, Moore IN, Seder R, Andersen H, Lewis MG, Montefiori DC, Sempowski GD, Baric RS, Acharya P, Haynes BF, Saunders KO

Cell (2021) 184 pp. 4203- [ DOI: doi:10.1016/j.cell.2021.06.021 Pubmed: 34242577 ]

EMD-23277
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3D View
CryoEM map of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1050.1
Release date: Jan. 27, 2021
Resolution: 3.35 Å
EM Method: Single-particle
Fitted PDBs: 7lcn
Q-score: 0.329

Li D, Edwards RJ, Manne K, Martinez DR, Schafer A, Alam SM, Wiehe K, Lu X, Parks R, Sutherland LL, Oguin 3rd TH, McDanal C, Perez LG, Mansouri K, Gobeil SMC, Janowska K, Stalls V, Kopp M, Cai F, Lee E, Foulger A, Hernandez GE, Sanzone A, Tilahun K, Jiang C, Tse LV, Bock KW, Minai M, Nagata BM, Cronin K, Gee-Lai V, Deyton M, Barr M, Von Holle T, Macintyre AN, Stover E, Feldman J, Hauser BM, Caradonna TM, Scobey TD, Rountree W, Wang Y, Moody MA, Cain DW, DeMarco CT, Denny TN, Woods CW, Petzold EW, Schmidt AG, Teng IT, Zhou T, Kwong PD, Mascola JR, Graham BS, Moore IN, Seder R, Andersen H, Lewis MG, Montefiori DC, Sempowski GD, Baric RS, Acharya P, Haynes BF, Saunders KO

Cell (2021) 184 pp. 4203- [ DOI: doi:10.1016/j.cell.2021.06.021 Pubmed: 34242577 ]

EMD-23279
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3D View
CryoEM map of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1047
Release date: Jan. 27, 2021
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7ld1
Q-score: 0.372

Li D, Edwards RJ, Manne K, Martinez DR, Schafer A, Alam SM, Wiehe K, Lu X, Parks R, Sutherland LL, Oguin 3rd TH, McDanal C, Perez LG, Mansouri K, Gobeil SMC, Janowska K, Stalls V, Kopp M, Cai F, Lee E, Foulger A, Hernandez GE, Sanzone A, Tilahun K, Jiang C, Tse LV, Bock KW, Minai M, Nagata BM, Cronin K, Gee-Lai V, Deyton M, Barr M, Von Holle T, Macintyre AN, Stover E, Feldman J, Hauser BM, Caradonna TM, Scobey TD, Rountree W, Wang Y, Moody MA, Cain DW, DeMarco CT, Denny TN, Woods CW, Petzold EW, Schmidt AG, Teng IT, Zhou T, Kwong PD, Mascola JR, Graham BS, Moore IN, Seder R, Andersen H, Lewis MG, Montefiori DC, Sempowski GD, Baric RS, Acharya P, Haynes BF, Saunders KO

Cell (2021) 184 pp. 4203- [ DOI: doi:10.1016/j.cell.2021.06.021 Pubmed: 34242577 ]

EMD-22929
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3D View
Negative stain electron microscopy structure of RBD-directed Fab DH1044 in complex with 2P SARS-CoV-2 spike ectodomain
Release date: Nov. 18, 2020
Resolution: 13.8 Å
EM Method: Single-particle

Li D, Edwards RJ, Manne K, Martinez DR, Schafer A, Alam SM, Wiehe K, Lu X, Parks R, Sutherland LL, McDanal C, Perez LG, Mansouri K, Gobeil SMC, Janowska K, Stalls V, Kopp M, Cai F, Lee E, Foulger A, Hernandez GE, Sanzone A, Tilahun K, Jiang C, Tse LV, Bock KW, Minai M, Nagata BM, Cronin K, Gee-Lai V, Deyton M, Barr M, Von Holle T, Macintyre AN, Stover E, Feldman J, Hauser BM, Caradonna TM, Scobey TD, Rountree W, Wang Y, Moody MA, Cain DW, DeMarco CT, Denny TN, Woods CW, Petzold EW, Schmidt AG, Teng IT, Zhou T, Kwong PD, Mascola JR, Graham BS, Moore IN, Seder R, Andersen H, Lewis MG, Montefiori DC, Sempowski GD, Baric RS, Acharya P, Haynes BF, Saunders KO

Cell (2021) 184 pp. 4203-4219.e32 [ DOI: doi:10.1016/j.cell.2021.06.021 Pubmed: 34242577 ]

EMD-22930
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3D View
Negative stain electron microscopy reconstruction of cross-reactive RBD-directed Fab DH1045 complexed with hexapro SARS-CoV-2 spike ectodomain
Release date: Nov. 18, 2020
Resolution: 10.2 Å
EM Method: Single-particle

Li D, Edwards RJ, Manne K, Martinez DR, Schafer A, Alam SM, Wiehe K, Lu X, Parks R, Sutherland LL, McDanal C, Perez LG, Mansouri K, Gobeil SMC, Janowska K, Stalls V, Kopp M, Cai F, Lee E, Foulger A, Hernandez GE, Sanzone A, Tilahun K, Jiang C, Tse LV, Bock KW, Minai M, Nagata BM, Cronin K, Gee-Lai V, Deyton M, Barr M, Von Holle T, Macintyre AN, Stover E, Feldman J, Hauser BM, Caradonna TM, Scobey TD, Rountree W, Wang Y, Moody MA, Cain DW, DeMarco CT, Denny TN, Woods CW, Petzold EW, Schmidt AG, Teng IT, Zhou T, Kwong PD, Mascola JR, Graham BS, Moore IN, Seder R, Andersen H, Lewis MG, Montefiori DC, Sempowski GD, Baric RS, Acharya P, Haynes BF, Saunders KO

Cell (2021) 184 pp. 4203-4219.e32 [ DOI: doi:10.1016/j.cell.2021.06.021 Pubmed: 34242577 ]

EMD-22933
Download Map
3D View
Negative stain electro microscopy reconstruction of cross-reactive RBD-directed Fab DH1047 in complex with hexapro SARS-CoV-2 spike ectodomain
Release date: Nov. 18, 2020
Resolution: 8.4 Å
EM Method: Single-particle

Li D, Edwards RJ, Manne K, Martinez DR, Schafer A, Alam SM, Wiehe K, Lu X, Parks R, Sutherland LL, McDanal C, Perez LG, Mansouri K, Gobeil SMC, Janowska K, Stalls V, Kopp M, Cai F, Lee E, Foulger A, Hernandez GE, Sanzone A, Tilahun K, Jiang C, Tse LV, Bock KW, Minai M, Nagata BM, Cronin K, Gee-Lai V, Deyton M, Barr M, Von Holle T, Macintyre AN, Stover E, Feldman J, Hauser BM, Caradonna TM, Scobey TD, Rountree W, Wang Y, Moody MA, Cain DW, DeMarco CT, Denny TN, Woods CW, Petzold EW, Schmidt AG, Teng IT, Zhou T, Kwong PD, Mascola JR, Graham BS, Moore IN, Seder R, Andersen H, Lewis MG, Montefiori DC, Sempowski GD, Baric RS, Acharya P, Haynes BF, Saunders KO

Cell (2021) 184 pp. 4203-4219.e32 [ DOI: doi:10.1016/j.cell.2021.06.021 Pubmed: 34242577 ]

EMD-22936
Download Map
3D View
Negative stain electron microscopy reconstruction of NTD-directed neutralizing antibody Fab DH1048 in complex with hexapro SARS-CoV-2 spike ectodomain
Release date: Nov. 18, 2020
Resolution: 16.8 Å
EM Method: Single-particle

Li D, Edwards RJ, Manne K, Martinez DR, Schafer A, Alam SM, Wiehe K, Lu X, Parks R, Sutherland LL, McDanal C, Perez LG, Mansouri K, Gobeil SMC, Janowska K, Stalls V, Kopp M, Cai F, Lee E, Foulger A, Hernandez GE, Sanzone A, Tilahun K, Jiang C, Tse LV, Bock KW, Minai M, Nagata BM, Cronin K, Gee-Lai V, Deyton M, Barr M, Von Holle T, Macintyre AN, Stover E, Feldman J, Hauser BM, Caradonna TM, Scobey TD, Rountree W, Wang Y, Moody MA, Cain DW, DeMarco CT, Denny TN, Woods CW, Petzold EW, Schmidt AG, Teng IT, Zhou T, Kwong PD, Mascola JR, Graham BS, Moore IN, Seder R, Andersen H, Lewis MG, Montefiori DC, Sempowski GD, Baric RS, Acharya P, Haynes BF, Saunders KO

Cell (2021) 184 pp. 4203-4219.e32 [ DOI: doi:10.1016/j.cell.2021.06.021 Pubmed: 34242577 ]

Sort by: Download
Showing 1 - 10 of 32. Page 1 of 4
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [32]

Current status

  • REL [32]

Sample type

  • Complex [32]
  • Protein [6]
  • Ligand [5]

Organism

  • Severe acute respiratory syndrome coronavirus [32]
  • Homo sapiens [12]

EM Method

  • Single-particle [32]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [5]
  • ≥ 8Å and < 12Å [3]
  • ≥ 12Å and < 16Å [4]
  • ≥ 16Å and < 20Å [19]

Model molecular weight

  • 50-100 kDa [1]
  • 250-500 kDa [1]
  • 500-1000 kDa [4]

Release Date

  • 2023 [1]
  • 2021 [5]
  • 2020 [26]

Author by name

  • Acharya P [32]
  • Andersen H [32]
  • Baric RS [32]
  • Barr M [32]
  • Bock KW [32]
  • Cain DW [32]
  • Demarco CT [32]
  • Denny TN [32]
  • Edwards RJ [32]
  • Haynes BF [32]
  • Lee E [32]
  • Lewis MG [32]
  • Li D [32]
  • Lu X [32]
  • Manne K [32]
  • Mansouri K [32]
  • Martinez DR [32]
  • Minai M [32]
  • Montefiori DC [32]
  • Moore IN [32]
  • Nagata BM [32]
  • Parks R [32]
  • Saunders KO [32]
  • Schafer A [32]
  • Seder R [32]
  • Sempowski GD [32]
  • Stalls V [32]
  • Sutherland LL [32]
  • Alam SM [31]
  • Cai F [31]
  • Caradonna TM [31]
  • Cronin K [31]
  • Deyton M [31]
  • Feldman J [31]
  • Foulger A [31]
  • Gee-lai V [31]
  • Gobeil SMC [31]
  • Graham BS [31]
  • Hauser BM [31]
  • Hernandez GE [31]
  • Janowska K [31]
  • Jiang C [31]
  • Kopp M [31]
  • Kwong PD [31]
  • Macintyre AN [31]
  • Mascola JR [31]
  • Mcdanal C [31]
  • Moody MA [31]
  • Perez LG [31]
  • Petzold EW [31]
  • Rountree W [31]
  • Sanzone A [31]
  • Schmidt AG [31]
  • Scobey TD [31]
  • Stover E [31]
  • Teng IT [31]
  • Tilahun K [31]
  • Tse LV [31]
  • Von Holle T [31]
  • Wang Y [31]
  • Wiehe K [31]
  • Woods CW [31]
  • Zhou T [31]
  • Oguin 3Rd Th [5]
  • Barbosa C [1]
  • Beck WE [1]
  • Eaton A [1]
  • Gobeil S [1]
  • Golding H [1]
  • Henderson R [1]
  • Khurana S [1]
  • Malewana RD [1]
  • May A [1]
  • May AJ [1]
  • Muramatsu H [1]
  • Newman A [1]
  • Oguin TH [1]
  • Pardi N [1]
  • Santra S [1]
  • Tam Y [1]
  • Tang J [1]
  • Weissman D [1]

Author by ORCID

  • Gobeil SMC [31]
  • Hauser BM [31]
  • Mansouri K [30]
  • Caradonna TM [30]
  • Macintyre AN [30]
  • Sempowski GD [30]
  • Tilahun K [30]
  • Kwong PD [30]
  • Edwards RJ [30]
  • Oguin 3Rd Th [4]
  • Saunders KO [1]
  • Graham BS [1]
  • Malewana RD [1]

Journal

  • BIORXIV [32]
  • CELL [30]

Software

  • CTFFIND [26]
  • RELION [26]
  • CRYOSPARC [4]

Microscope

  • FEI/PHILIPS EM420 [26]
  • FEI TITAN KRIOS [5]
  • TFS KRIOS [1]

Electron Source

  • LAB6 [26]
  • FIELD EMISSION GUN [6]

Film or detector model

  • OTHER [26]
  • GATAN K3 6K X 4K [6]

External links

  • Complex Portal [6]
  • InterPro [6]
  • PDB [6]
  • PDBe-Kb [6]
  • Pfam [6]
  • UniProt [6]
  • AlphaFold DB [5]
  • ChEBI [5]
  • ChEMBL [5]
  • Gene Ontology [5]