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author:"Rodriguez OL"

Filter By

Current Database

  • EMDB [34]

Current status

  • REL [34]

Sample type

  • Complex [34]
  • Protein [8]
  • Ligand [6]

Organism

  • (no species) [26]
  • Homo sapiens [16]
  • Human immunodeficiency virus 1 [7]
  • Macaca mulatta [6]
  • Mus musculus [1]
  • Synthetic construct [1]

EM Method

  • Single-particle [34]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [5]
  • ≥ 4Å and < 5Å [1]
  • ≥ 16Å and < 20Å [9]
  • ≥ 20Å and < 30Å [18]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [5]

Release Date

  • 2024 [7]
  • 2019 [27]

Author by name

  • Burton DR [34]
  • Cottrell CA [34]
  • Crotty S [34]
  • Rodriguez OL [34]
  • Schief WR [34]
  • Smith ML [34]
  • Ward AB [34]
  • Watson CT [34]
  • Bosinger SE [33]
  • Carnathan DG [28]
  • Kulp DW [28]
  • Silvestri G [28]
  • Bastidas R [27]
  • Choe Y [27]
  • Cirelli KM [27]
  • Cossette B [27]
  • Enemuo CA [27]
  • Gebru EH [27]
  • Gibson W [27]
  • Irvine DJ [27]
  • Kumar V [27]
  • Martin JT [27]
  • Melo MB [27]
  • Menis S [27]
  • Murrell B [27]
  • Nakao C [27]
  • Nogal B [27]
  • Patel NB [27]
  • Pauthner MG [27]
  • Reiss S [27]
  • Tokatlian T [27]
  • Upadhyay AA [27]
  • Viviano F [27]
  • Wolabaugh AN [27]
  • Adachi Y [7]
  • Allen JD [7]
  • Baboo S [7]
  • Crispin M [7]
  • Diedrich JK [7]
  • Georgeson E [7]
  • Kalyuzhniy O [7]
  • Kubitz M [7]
  • Lee JH [7]
  • Liguori A [7]
  • Ozorowski G [7]
  • Paulson JC [7]
  • Phung I [7]
  • Saha S [7]
  • Schiffner T [7]
  • Shields K [7]
  • Sok D [7]
  • Willis JR [7]
  • Yates 3Rd Jr [7]
  • Altheide TK [6]
  • Barman S [6]
  • Burns A [6]
  • Ma KM [6]
  • Madden PJ [6]
  • Metz A [6]
  • Mopuri R [6]
  • Mullen TM [6]
  • Salcedo E [6]
  • Schultze SE [6]
  • Steichen JM [6]
  • Sutton HJ [6]
  • Torres JL [6]
  • Alt FW [1]
  • Amara RR [1]
  • Batista FD [1]
  • Briney B [1]
  • Cheng HL [1]
  • Cho SY [1]
  • Davis J [1]
  • Elsliger MA [1]
  • Eskandarzadeh S [1]
  • Flynn CT [1]
  • Grigoryan G [1]
  • Havenar-daughton C [1]
  • Himansu S [1]
  • Hu X [1]
  • Huang J [1]
  • Hurtado J [1]
  • Irimia A [1]
  • Kirsch KH [1]
  • Landais E [1]
  • Lee CD [1]
  • Lewis V [1]
  • Liang CH [1]
  • Lin YC [1]
  • Marina-zarate E [1]
  • Mckenney K [1]
  • Nair U [1]
  • Ngo JT [1]
  • Pecetta S [1]
  • Phelps N [1]
  • Rantalainen K [1]
  • Ray R [1]
  • Ruiz J [1]
  • Schulze S [1]
  • Serra AM [1]

Author by ORCID

  • Pauthner MG [27]
  • Murrell B [27]
  • Melo MB [27]
  • Upadhyay AA [27]
  • Martin JT [27]
  • Georgeson E [7]
  • Yates 3Rd Jr [7]
  • Burton DR [7]
  • Schiffner T [7]
  • Ward AB [7]
  • Watson CT [7]
  • Phung I [7]
  • Willis JR [7]
  • Crispin M [7]
  • Schief WR [7]
  • Cottrell CA [7]
  • Baboo S [7]
  • Kalyuzhniy O [7]
  • Crotty S [7]
  • Sok D [7]
  • Ozorowski G [7]
  • Allen JD [7]
  • Paulson JC [7]
  • Mullen TM [6]
  • Diedrich JK [6]
  • Ma KM [6]
  • Smith ML [6]
  • Salcedo E [6]
  • Lee JH [6]
  • Adachi Y [6]
  • Mopuri R [6]
  • Bosinger SE [6]
  • Steichen JM [6]
  • Sutton HJ [6]
  • Liguori A [6]
  • Barman S [6]
  • Torres JL [6]
  • Burns A [6]
  • Madden PJ [6]
  • Metz A [6]
  • Silvestri G [1]
  • Swanson O [1]
  • Spencer S [1]
  • Pecetta S [1]
  • Kulp DW [1]
  • Alt FW [1]
  • Batista FD [1]
  • Rantalainen K [1]
  • Lin YC [1]
  • Rodriguez OL [1]
  • Lee CD [1]
  • Amara RR [1]
  • Wilson IA [1]
  • Himansu S [1]
  • Landais E [1]
  • Davis J [1]
  • Marina-zarate E [1]
  • Grigoryan G [1]
  • Saha S [1]

Journal

  • CELL [27]
  • SCIENCE [6]
  • NAT IMMUNOL [1]

Software

  • RELION [27]
  • CRYOSPARC [7]

Microscope

  • FEI TECNAI 12 [14]
  • FEI TECNAI SPIRIT [12]
  • FEI TALOS ARCTICA [4]
  • TFS GLACIOS [3]
  • FEI TITAN KRIOS [1]

Electron Source

  • LAB6 [26]
  • FIELD EMISSION GUN [8]

Film or detector model

  • OTHER [14]
  • FEI EAGLE 2K X 2K [12]
  • FEI FALCON IV 4K X 4K [3]
  • GATAN K2 SUMMIT 4K X 4K [3]
  • FEI CETA 4K X 4K [1]
  • GATAN K3 6K X 4K [1]

External links

  • PDB [7]
  • ChEBI [6]
  • ChEMBL [6]
  • PDBe-Kb [2]
  • UniProt [2]
  • AlphaFold DB [1]
  • Complex Portal [1]
  • Gene Ontology [1]
  • InterPro [1]
  • Pfam [1]
Sort by: Download
Showing 1 - 10 of 34. Page 1 of 4
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EMD-40825
Download Map
3D View
10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10
Release date: May 22, 2024
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 8sx3
Q-score: 0.378

Schiffner T, Phung I, Ray R, Irimia A, Tian M, Swanson O, Lee JH, Lee CD, Marina-Zarate E, Cho SY, Huang J, Ozorowski G, Skog PD, Serra AM, Rantalainen K, Allen JD, Baboo S, Rodriguez OL, Himansu S, Zhou J, Hurtado J, Flynn CT, McKenney K, Havenar-Daughton C, Saha S, Shields K, Schulze S, Smith ML, Liang CH, Toy L, Pecetta S, Lin YC, Willis JR, Sesterhenn F, Kulp DW, Hu X, Cottrell CA, Zhou X, Ruiz J, Wang X, Nair U, Kirsch KH, Cheng HL, Davis J, Kalyuzhniy O, Liguori A, Diedrich JK, Ngo JT, Lewis V, Phelps N, Tingle RD, Spencer S, Georgeson E, Adachi Y, Kubitz M, Eskandarzadeh S, Elsliger MA, Amara RR, Landais E, Briney B, Burton DR, Carnathan DG, Silvestri G, Watson CT, Yates 3rd JR, Paulson JC, Crispin M, Grigoryan G, Ward AB, Sok D, Alt FW, Wilson IA, Batista FD, Crotty S, Schief WR

Nat Immunol (2024) 25 pp. 1073-1082 [ Pubmed: 38816615 DOI: doi:10.1038/s41590-024-01833-w ]

EMD-41024
Download Map
3D View
MD65 N332-GT5 SOSIP in complex with RM_N332_03 Fab and RM20A3 Fab
Release date: May 8, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8t49
Q-score: 0.495

Steichen JM, Phung I, Salcedo E, Ozorowski G, Willis JR, Baboo S, Liguori A, Cottrell CA, Torres JL, Madden PJ, Ma KM, Sutton HJ, Lee JH, Kalyuzhniy O, Allen JD, Rodriguez OL, Adachi Y, Mullen TM, Georgeson E, Kubitz M, Burns A, Barman S, Mopuri R, Metz A, Altheide TK, Diedrich JK, Saha S, Shields K, Schultze SE, Smith ML, Schiffner T, Burton DR, Watson CT, Bosinger SE, Crispin M, Yates 3rd JR, Paulson JC, Ward AB, Sok D, Crotty S, Schief WR

Science (2024) 384 pp. eadj8321-eadj8321 [ DOI: doi:10.1126/science.adj8321 Pubmed: 38753769 ]

EMD-41025
Download Map
3D View
MD65 N332-GT5 SOSIP in complex with RM_N332_36 Fab and RM20A3 Fab
Release date: May 8, 2024
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8t4a
Q-score: 0.466

Steichen JM, Phung I, Salcedo E, Ozorowski G, Willis JR, Baboo S, Liguori A, Cottrell CA, Torres JL, Madden PJ, Ma KM, Sutton HJ, Lee JH, Kalyuzhniy O, Allen JD, Rodriguez OL, Adachi Y, Mullen TM, Georgeson E, Kubitz M, Burns A, Barman S, Mopuri R, Metz A, Altheide TK, Diedrich JK, Saha S, Shields K, Schultze SE, Smith ML, Schiffner T, Burton DR, Watson CT, Bosinger SE, Crispin M, Yates 3rd JR, Paulson JC, Ward AB, Sok D, Crotty S, Schief WR

Science (2024) 384 pp. eadj8321-eadj8321 [ DOI: doi:10.1126/science.adj8321 Pubmed: 38753769 ]

EMD-41026
Download Map
3D View
MD65 N332-GT5 SOSIP in complex with RM_N332_32 Fab and RM20A3
Release date: May 8, 2024
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8t4b
Q-score: 0.483

Steichen JM, Phung I, Salcedo E, Ozorowski G, Willis JR, Baboo S, Liguori A, Cottrell CA, Torres JL, Madden PJ, Ma KM, Sutton HJ, Lee JH, Kalyuzhniy O, Allen JD, Rodriguez OL, Adachi Y, Mullen TM, Georgeson E, Kubitz M, Burns A, Barman S, Mopuri R, Metz A, Altheide TK, Diedrich JK, Saha S, Shields K, Schultze SE, Smith ML, Schiffner T, Burton DR, Watson CT, Bosinger SE, Crispin M, Yates 3rd JR, Paulson JC, Ward AB, Sok D, Crotty S, Schief WR

Science (2024) 384 pp. eadj8321-eadj8321 [ DOI: doi:10.1126/science.adj8321 Pubmed: 38753769 ]

EMD-41027
Download Map
3D View
MD65 N332-GT5 SOSIP in complex with RM_N332_08 Fab and RM20A3 Fab
Release date: May 8, 2024
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8t4d
Q-score: 0.509

Steichen JM, Phung I, Salcedo E, Ozorowski G, Willis JR, Baboo S, Liguori A, Cottrell CA, Torres JL, Madden PJ, Ma KM, Sutton HJ, Lee JH, Kalyuzhniy O, Allen JD, Rodriguez OL, Adachi Y, Mullen TM, Georgeson E, Kubitz M, Burns A, Barman S, Mopuri R, Metz A, Altheide TK, Diedrich JK, Saha S, Shields K, Schultze SE, Smith ML, Schiffner T, Burton DR, Watson CT, Bosinger SE, Crispin M, Yates 3rd JR, Paulson JC, Ward AB, Sok D, Crotty S, Schief WR

Science (2024) 384 pp. eadj8321-eadj8321 [ DOI: doi:10.1126/science.adj8321 Pubmed: 38753769 ]

EMD-41034
Download Map
3D View
MD64 N332-GT5 SOSIP
Release date: May 8, 2024
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8t4k
Q-score: 0.62

Steichen JM, Phung I, Salcedo E, Ozorowski G, Willis JR, Baboo S, Liguori A, Cottrell CA, Torres JL, Madden PJ, Ma KM, Sutton HJ, Lee JH, Kalyuzhniy O, Allen JD, Rodriguez OL, Adachi Y, Mullen TM, Georgeson E, Kubitz M, Burns A, Barman S, Mopuri R, Metz A, Altheide TK, Diedrich JK, Saha S, Shields K, Schultze SE, Smith ML, Schiffner T, Burton DR, Watson CT, Bosinger SE, Crispin M, Yates 3rd JR, Paulson JC, Ward AB, Sok D, Crotty S, Schief WR

Science (2024) 384 pp. eadj8321-eadj8321 [ DOI: doi:10.1126/science.adj8321 Pubmed: 38753769 ]

EMD-41035
Download Map
3D View
MD65 N332-GT5 SOSIP in complex with RM_N332_07 Fab and RM20A3 Fab
Release date: May 8, 2024
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8t4l
Q-score: 0.476

Steichen JM, Phung I, Salcedo E, Ozorowski G, Willis JR, Baboo S, Liguori A, Cottrell CA, Torres JL, Madden PJ, Ma KM, Sutton HJ, Lee JH, Kalyuzhniy O, Allen JD, Rodriguez OL, Adachi Y, Mullen TM, Georgeson E, Kubitz M, Burns A, Barman S, Mopuri R, Metz A, Altheide TK, Diedrich JK, Saha S, Shields K, Schultze SE, Smith ML, Schiffner T, Burton DR, Watson CT, Bosinger SE, Crispin M, Yates 3rd JR, Paulson JC, Ward AB, Sok D, Crotty S, Schief WR

Science (2024) 384 pp. eadj8321-eadj8321 [ DOI: doi:10.1126/science.adj8321 Pubmed: 38753769 ]

EMD-9175
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3D View
Negative Stain EM map of polyclonal serum in complex with BG505 SOSIP.664 from non-human primate 224-13
Release date: June 5, 2019
Resolution: 26.8 Å
EM Method: Single-particle

Cirelli KM, Carnathan DG, Nogal B, Martin JT, Rodriguez OL, Upadhyay AA, Enemuo CA, Gebru EH, Choe Y, Viviano F, Nakao C, Pauthner MG, Reiss S, Cottrell CA, Smith ML, Bastidas R, Gibson W, Wolabaugh AN, Melo MB, Cossette B, Kumar V, Patel NB, Tokatlian T, Menis S, Kulp DW, Burton DR, Murrell B, Schief WR, Bosinger SE, Ward AB, Watson CT, Silvestri G, Irvine DJ, Crotty S

Cell (2019) 177 pp. 1153-1171.e28 [ Pubmed: 31080066 DOI: doi:10.1016/j.cell.2019.04.012 ]

EMD-9176
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3D View
Negative Stain EM map of polyclonal serum in complex with BG505 SOSIP.664 from non-human primate RCn
Release date: June 5, 2019
Resolution: 26.8 Å
EM Method: Single-particle

Cirelli KM, Carnathan DG, Nogal B, Martin JT, Rodriguez OL, Upadhyay AA, Enemuo CA, Gebru EH, Choe Y, Viviano F, Nakao C, Pauthner MG, Reiss S, Cottrell CA, Smith ML, Bastidas R, Gibson W, Wolabaugh AN, Melo MB, Cossette B, Kumar V, Patel NB, Tokatlian T, Menis S, Kulp DW, Burton DR, Murrell B, Schief WR, Bosinger SE, Ward AB, Watson CT, Silvestri G, Irvine DJ, Crotty S

Cell (2019) 177 pp. 1153-1171.e28 [ Pubmed: 31080066 DOI: doi:10.1016/j.cell.2019.04.012 ]

EMD-9177
Download Map
3D View
Negative Stain EM map of polyclonal serum in complex with BG505 SOSIP.664 from non-human primate RFr16
Release date: June 5, 2019
Resolution: 26.8 Å
EM Method: Single-particle

Cirelli KM, Carnathan DG, Nogal B, Martin JT, Rodriguez OL, Upadhyay AA, Enemuo CA, Gebru EH, Choe Y, Viviano F, Nakao C, Pauthner MG, Reiss S, Cottrell CA, Smith ML, Bastidas R, Gibson W, Wolabaugh AN, Melo MB, Cossette B, Kumar V, Patel NB, Tokatlian T, Menis S, Kulp DW, Burton DR, Murrell B, Schief WR, Bosinger SE, Ward AB, Watson CT, Silvestri G, Irvine DJ, Crotty S

Cell (2019) 177 pp. 1153-1171.e28 [ Pubmed: 31080066 DOI: doi:10.1016/j.cell.2019.04.012 ]

Sort by: Download
Showing 1 - 10 of 34. Page 1 of 4
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [34]

Current status

  • REL [34]

Sample type

  • Complex [34]
  • Protein [8]
  • Ligand [6]

Organism

  • (no species) [26]
  • Homo sapiens [16]
  • Human immunodeficiency virus 1 [7]
  • Macaca mulatta [6]
  • Mus musculus [1]
  • Synthetic construct [1]

EM Method

  • Single-particle [34]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [5]
  • ≥ 4Å and < 5Å [1]
  • ≥ 16Å and < 20Å [9]
  • ≥ 20Å and < 30Å [18]

Model molecular weight

  • 100-250 kDa [2]
  • 250-500 kDa [5]

Release Date

  • 2024 [7]
  • 2019 [27]

Author by name

  • Burton DR [34]
  • Cottrell CA [34]
  • Crotty S [34]
  • Rodriguez OL [34]
  • Schief WR [34]
  • Smith ML [34]
  • Ward AB [34]
  • Watson CT [34]
  • Bosinger SE [33]
  • Carnathan DG [28]
  • Kulp DW [28]
  • Silvestri G [28]
  • Bastidas R [27]
  • Choe Y [27]
  • Cirelli KM [27]
  • Cossette B [27]
  • Enemuo CA [27]
  • Gebru EH [27]
  • Gibson W [27]
  • Irvine DJ [27]
  • Kumar V [27]
  • Martin JT [27]
  • Melo MB [27]
  • Menis S [27]
  • Murrell B [27]
  • Nakao C [27]
  • Nogal B [27]
  • Patel NB [27]
  • Pauthner MG [27]
  • Reiss S [27]
  • Tokatlian T [27]
  • Upadhyay AA [27]
  • Viviano F [27]
  • Wolabaugh AN [27]
  • Adachi Y [7]
  • Allen JD [7]
  • Baboo S [7]
  • Crispin M [7]
  • Diedrich JK [7]
  • Georgeson E [7]
  • Kalyuzhniy O [7]
  • Kubitz M [7]
  • Lee JH [7]
  • Liguori A [7]
  • Ozorowski G [7]
  • Paulson JC [7]
  • Phung I [7]
  • Saha S [7]
  • Schiffner T [7]
  • Shields K [7]
  • Sok D [7]
  • Willis JR [7]
  • Yates 3Rd Jr [7]
  • Altheide TK [6]
  • Barman S [6]
  • Burns A [6]
  • Ma KM [6]
  • Madden PJ [6]
  • Metz A [6]
  • Mopuri R [6]
  • Mullen TM [6]
  • Salcedo E [6]
  • Schultze SE [6]
  • Steichen JM [6]
  • Sutton HJ [6]
  • Torres JL [6]
  • Alt FW [1]
  • Amara RR [1]
  • Batista FD [1]
  • Briney B [1]
  • Cheng HL [1]
  • Cho SY [1]
  • Davis J [1]
  • Elsliger MA [1]
  • Eskandarzadeh S [1]
  • Flynn CT [1]
  • Grigoryan G [1]
  • Havenar-daughton C [1]
  • Himansu S [1]
  • Hu X [1]
  • Huang J [1]
  • Hurtado J [1]
  • Irimia A [1]
  • Kirsch KH [1]
  • Landais E [1]
  • Lee CD [1]
  • Lewis V [1]
  • Liang CH [1]
  • Lin YC [1]
  • Marina-zarate E [1]
  • Mckenney K [1]
  • Nair U [1]
  • Ngo JT [1]
  • Pecetta S [1]
  • Phelps N [1]
  • Rantalainen K [1]
  • Ray R [1]
  • Ruiz J [1]
  • Schulze S [1]
  • Serra AM [1]

Author by ORCID

  • Pauthner MG [27]
  • Murrell B [27]
  • Melo MB [27]
  • Upadhyay AA [27]
  • Martin JT [27]
  • Georgeson E [7]
  • Yates 3Rd Jr [7]
  • Burton DR [7]
  • Schiffner T [7]
  • Ward AB [7]
  • Watson CT [7]
  • Phung I [7]
  • Willis JR [7]
  • Crispin M [7]
  • Schief WR [7]
  • Cottrell CA [7]
  • Baboo S [7]
  • Kalyuzhniy O [7]
  • Crotty S [7]
  • Sok D [7]
  • Ozorowski G [7]
  • Allen JD [7]
  • Paulson JC [7]
  • Mullen TM [6]
  • Diedrich JK [6]
  • Ma KM [6]
  • Smith ML [6]
  • Salcedo E [6]
  • Lee JH [6]
  • Adachi Y [6]
  • Mopuri R [6]
  • Bosinger SE [6]
  • Steichen JM [6]
  • Sutton HJ [6]
  • Liguori A [6]
  • Barman S [6]
  • Torres JL [6]
  • Burns A [6]
  • Madden PJ [6]
  • Metz A [6]
  • Silvestri G [1]
  • Swanson O [1]
  • Spencer S [1]
  • Pecetta S [1]
  • Kulp DW [1]
  • Alt FW [1]
  • Batista FD [1]
  • Rantalainen K [1]
  • Lin YC [1]
  • Rodriguez OL [1]
  • Lee CD [1]
  • Amara RR [1]
  • Wilson IA [1]
  • Himansu S [1]
  • Landais E [1]
  • Davis J [1]
  • Marina-zarate E [1]
  • Grigoryan G [1]
  • Saha S [1]

Journal

  • CELL [27]
  • SCIENCE [6]
  • NAT IMMUNOL [1]

Software

  • RELION [27]
  • CRYOSPARC [7]

Microscope

  • FEI TECNAI 12 [14]
  • FEI TECNAI SPIRIT [12]
  • FEI TALOS ARCTICA [4]
  • TFS GLACIOS [3]
  • FEI TITAN KRIOS [1]

Electron Source

  • LAB6 [26]
  • FIELD EMISSION GUN [8]

Film or detector model

  • OTHER [14]
  • FEI EAGLE 2K X 2K [12]
  • FEI FALCON IV 4K X 4K [3]
  • GATAN K2 SUMMIT 4K X 4K [3]
  • FEI CETA 4K X 4K [1]
  • GATAN K3 6K X 4K [1]

External links

  • PDB [7]
  • ChEBI [6]
  • ChEMBL [6]
  • PDBe-Kb [2]
  • UniProt [2]
  • AlphaFold DB [1]
  • Complex Portal [1]
  • Gene Ontology [1]
  • InterPro [1]
  • Pfam [1]