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author:"Poolman B"

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Current Database

  • EMDB [7]

Current status

  • REL [7]

Sample type

  • Complex [7]
  • Protein [7]
  • Ligand [4]
  • RNA [1]

Organism

  • Lactococcus lactis [6]
  • Lactococcus lactis subsp. cremoris [1]

EM Method

  • Single-particle [7]

Resolution

  • ≥ 3Å and < 4Å [3]
  • ≥ 4Å and < 5Å [3]
  • ≥ 5Å and < 6Å [1]

Model molecular weight

  • 100-250 kDa [5]
  • 2-5 MDa [1]

Release Date

  • 2025 [1]
  • 2020 [5]
  • 2017 [1]

Author by name

  • Poolman B [7]
  • Paulino C [6]
  • Schuurman-wolters GK [6]
  • Krepel ST [5]
  • Rheinberger J [5]
  • Sikkema HR [5]
  • De Boer M [5]
  • Van Den Noort M [5]
  • Arkhipova V [1]
  • Boekema EJ [1]
  • Drougkas P [1]
  • Foster AJ [1]
  • Franken LE [1]
  • Guskov A [1]
  • Li H [1]
  • Oostergetel GT [1]
  • Pijning T [1]
  • Puri P [1]
  • Ten Kate J [1]

Author by ORCID

  • Paulino C [6]
  • Poolman B [6]
  • Krepel ST [5]
  • De Boer M [5]
  • Van Den Noort M [5]
  • Sikkema HR [5]
  • Rheinberger J [5]
  • Oostergetel GT [1]
  • Arkhipova V [1]
  • Franken LE [1]
  • Foster AJ [1]
  • Guskov A [1]
  • Pijning T [1]
  • Drougkas P [1]
  • Li H [1]

Journal

  • SCI ADV [5]
  • COMMUN BIOL [1]
  • NAT COMMUN [1]

Software

  • RELION [7]
  • CTFFIND [1]
  • XMIPP [1]

Microscope

  • FEI TALOS ARCTICA [6]
  • FEI TITAN KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [7]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [6]
  • FEI FALCON II 4K X 4K [1]

External links

  • AlphaFold DB [6]
  • Gene Ontology [6]
  • InterPro [6]
  • PDB [6]
  • PDBe-Kb [6]
  • Pfam [6]
  • UniProt [6]
  • ChEBI [4]
  • ChEMBL [4]
  • DrugBank [3]
  • SCOP2 [1]
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EMD-51096
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3D View
Cryo-EM structure of CdaA-DAC domain in complex with GlmM
Release date: Jan. 8, 2025
Resolution: 4.84 Å
EM Method: Single-particle
Fitted PDBs: 9g69
Q-score: 0.329

Foster AJ, Li H, Drougkas P, Schuurman-Wolters GK, Ten Kate J, Paulino C, Poolman B

Commun Biol (2024) 7 pp. 1710-1710 [ DOI: doi:10.1038/s42003-024-07420-x Pubmed: 39739009 ]

EMD-11782
Download Map
3D View
OpuA apo inward-facing
Release date: Nov. 25, 2020
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7ahc
Q-score: 0.473

Sikkema HR, van den Noort M, Rheinberger J, de Boer M, Krepel ST, Schuurman-Wolters GK, Paulino C, Poolman B

Sci Adv (2020) 6 [ DOI: doi:10.1126/sciadv.abd7697 Pubmed: 33208376 ]

EMD-11783
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3D View
OpuA E190Q occluded
Release date: Nov. 25, 2020
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7ahd
Q-score: 0.496

Sikkema HR, van den Noort M, Rheinberger J, de Boer M, Krepel ST, Schuurman-Wolters GK, Paulino C, Poolman B

Sci Adv (2020) 6 [ DOI: doi:10.1126/sciadv.abd7697 Pubmed: 33208376 ]

EMD-11784
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3D View
OpuA inhibited inward facing
Release date: Nov. 25, 2020
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 7ahe
Q-score: 0.329

Sikkema HR, van den Noort M, Rheinberger J, de Boer M, Krepel ST, Schuurman-Wolters GK, Paulino C, Poolman B

Sci Adv (2020) 6 [ DOI: doi:10.1126/sciadv.abd7697 Pubmed: 33208376 ]

EMD-11785
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3D View
OpuA inward-facing in the presence of glycine betaine
Release date: Nov. 25, 2020
Resolution: 4.5 Å
EM Method: Single-particle

Sikkema HR, van den Noort M, Rheinberger J, de Boer M, Krepel ST, Schuurman-Wolters GK, Paulino C, Poolman B

Sci Adv (2020) 6 [ DOI: doi:10.1126/sciadv.abd7697 Pubmed: 33208376 ]

EMD-11786
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3D View
OpuA inhibited inward-facing, SBD docked
Release date: Nov. 25, 2020
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7ahh
Q-score: 0.463

Sikkema HR, van den Noort M, Rheinberger J, de Boer M, Krepel ST, Schuurman-Wolters GK, Paulino C, Poolman B

Sci Adv (2020) 6 [ DOI: doi:10.1126/sciadv.abd7697 Pubmed: 33208376 ]

EMD-3581
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Structure of 70S ribosome from Lactococcus lactis
Release date: Oct. 11, 2017
Resolution: 5.6 Å
EM Method: Single-particle
Fitted PDBs: 5myj
Q-score: 0.248

Franken LE, Oostergetel GT, Pijning T, Puri P, Arkhipova V, Boekema EJ, Poolman B, Guskov A

Nat Commun (2017) 8 pp. 722-722 [ Pubmed: 28959045 DOI: doi:10.1038/s41467-017-00718-x ]

Sort by: Download
Showing 1 - 7 of 7. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [7]

Current status

  • REL [7]

Sample type

  • Complex [7]
  • Protein [7]
  • Ligand [4]
  • RNA [1]

Organism

  • Lactococcus lactis [6]
  • Lactococcus lactis subsp. cremoris [1]

EM Method

  • Single-particle [7]

Resolution

  • ≥ 3Å and < 4Å [3]
  • ≥ 4Å and < 5Å [3]
  • ≥ 5Å and < 6Å [1]

Model molecular weight

  • 100-250 kDa [5]
  • 2-5 MDa [1]

Release Date

  • 2025 [1]
  • 2020 [5]
  • 2017 [1]

Author by name

  • Poolman B [7]
  • Paulino C [6]
  • Schuurman-wolters GK [6]
  • Krepel ST [5]
  • Rheinberger J [5]
  • Sikkema HR [5]
  • De Boer M [5]
  • Van Den Noort M [5]
  • Arkhipova V [1]
  • Boekema EJ [1]
  • Drougkas P [1]
  • Foster AJ [1]
  • Franken LE [1]
  • Guskov A [1]
  • Li H [1]
  • Oostergetel GT [1]
  • Pijning T [1]
  • Puri P [1]
  • Ten Kate J [1]

Author by ORCID

  • Paulino C [6]
  • Poolman B [6]
  • Krepel ST [5]
  • De Boer M [5]
  • Van Den Noort M [5]
  • Sikkema HR [5]
  • Rheinberger J [5]
  • Oostergetel GT [1]
  • Arkhipova V [1]
  • Franken LE [1]
  • Foster AJ [1]
  • Guskov A [1]
  • Pijning T [1]
  • Drougkas P [1]
  • Li H [1]

Journal

  • SCI ADV [5]
  • COMMUN BIOL [1]
  • NAT COMMUN [1]

Software

  • RELION [7]
  • CTFFIND [1]
  • XMIPP [1]

Microscope

  • FEI TALOS ARCTICA [6]
  • FEI TITAN KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [7]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [6]
  • FEI FALCON II 4K X 4K [1]

External links

  • AlphaFold DB [6]
  • Gene Ontology [6]
  • InterPro [6]
  • PDB [6]
  • PDBe-Kb [6]
  • Pfam [6]
  • UniProt [6]
  • ChEBI [4]
  • ChEMBL [4]
  • DrugBank [3]
  • SCOP2 [1]