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author:"Ploder L"

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Current Database

  • EMDB [4]

Current status

  • REL [4]

Sample type

  • Complex [4]
  • Ligand [4]
  • Protein [4]

Organism

  • Severe acute respiratory syndrome coronavirus [4]
  • Homo sapiens [4]

EM Method

  • Single-particle [4]

Resolution

  • ≥ 3Å and < 4Å [1]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [1]

Model molecular weight

  • 500-1000 kDa [4]

Release Date

  • 2021 [4]

Author by name

  • Amarasinghe GK [4]
  • Blazer L [4]
  • Brett Case J [4]
  • Capobianchi MR [4]
  • Chen C [4]
  • Chen RE [4]
  • Colavita F [4]
  • Diamond MS [4]
  • Ganaie S [4]
  • Garcia Perez J [4]
  • Gorelik M [4]
  • Gupta JB [4]
  • Jain S [4]
  • Leung DW [4]
  • Li Z [4]
  • Matusali G [4]
  • Miersch S [4]
  • Novelli G [4]
  • Pandolfi PP [4]
  • Pavlenco A [4]
  • Ploder L [4]
  • Rini J [4]
  • Saberianfar R [4]
  • Sidhu SS [4]
  • Singh S [4]
  • Subramania S [4]
  • Ustav M [4]
  • Ye W [4]
  • Rini JM [2]

Author by ORCID

  • Sidhu SS [4]
  • Li Z [4]
  • Matusali G [4]

Journal

  • J MOL BIOL [4]
  • BIORXIV [2]

Software

  • CRYOSPARC [4]

Microscope

  • FEI TITAN KRIOS [4]

Electron Source

  • FIELD EMISSION GUN [4]

Film or detector model

  • FEI FALCON IV 4K X 4K [4]

External links

  • AlphaFold DB [4]
  • ChEBI [4]
  • ChEMBL [4]
  • Complex Portal [4]
  • Gene Ontology [4]
  • InterPro [4]
  • PDB [4]
  • PDBe-Kb [4]
  • Pfam [4]
  • UniProt [4]
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Showing 1 - 4 of 4. Page 1 of 1
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EMD-22925
Download Map
3D View
cryo-EM structure of SARS-CoV-2 spike in complex with Fab 15033-7, two RBDs bound
Release date: Feb. 10, 2021
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 7kmk
Q-score: 0.191

Miersch S, Li Z, Saberianfar R, Ustav M, Brett Case J, Blazer L, Chen C, Ye W, Pavlenco A, Gorelik M, Garcia Perez J, Subramania S, Singh S, Ploder L, Ganaie S, Chen RE, Leung DW, Pandolfi PP, Novelli G, Matusali G, Colavita F, Capobianchi MR, Jain S, Gupta JB, Amarasinghe GK, Diamond MS, Rini J, Sidhu SS

J Mol Biol (2021) 433 pp. 167177-167177 [ DOI: doi:10.1016/j.jmb.2021.167177 Pubmed: 34329642 ]

EMD-22926
Download Map
3D View
cryo-EM structure of SARS-CoV-2 spike in complex with Fab 15033-7, three RBDs bound
Release date: Feb. 10, 2021
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7kml
Q-score: 0.23

Miersch S, Li Z, Saberianfar R, Ustav M, Brett Case J, Blazer L, Chen C, Ye W, Pavlenco A, Gorelik M, Garcia Perez J, Subramania S, Singh S, Ploder L, Ganaie S, Chen RE, Leung DW, Pandolfi PP, Novelli G, Matusali G, Colavita F, Capobianchi MR, Jain S, Gupta JB, Amarasinghe GK, Diamond MS, Rini J, Sidhu SS

J Mol Biol (2021) 433 pp. 167177-167177 [ DOI: doi:10.1016/j.jmb.2021.167177 Pubmed: 34329642 ]

EMD-23064
Download Map
3D View
SARS-CoV-2 spike protein in complex with Fab 15033-7, 3- up , asymmetric
Release date: Feb. 3, 2021
Resolution: 6.4 Å
EM Method: Single-particle
Fitted PDBs: 7kxj
Q-score: 0.113

Miersch S, Li Z, Saberianfar R, Ustav M, Brett Case J, Blazer L, Chen C, Ye W, Pavlenco A, Gorelik M, Garcia Perez J, Subramania S, Singh S, Ploder L, Ganaie S, Chen RE, Leung DW, Pandolfi PP, Novelli G, Matusali G, Colavita F, Capobianchi MR, Jain S, Gupta JB, Amarasinghe GK, Diamond MS, Rini J, Sidhu SS

J Mol Biol (2021) 433 pp. 167177-167177 [ DOI: doi:10.1016/j.jmb.2021.167177 Pubmed: 34329642 ]

EMD-23065
Download Map
3D View
SARS-CoV-2 spike protein in complex with Fab 15033-7, 2- up -1- down conformation
Release date: Feb. 3, 2021
Resolution: 5.0 Å
EM Method: Single-particle
Fitted PDBs: 7kxk
Q-score: 0.118

Miersch S, Li Z, Saberianfar R, Ustav M, Brett Case J, Blazer L, Chen C, Ye W, Pavlenco A, Gorelik M, Garcia Perez J, Subramania S, Singh S, Ploder L, Ganaie S, Chen RE, Leung DW, Pandolfi PP, Novelli G, Matusali G, Colavita F, Capobianchi MR, Jain S, Gupta JB, Amarasinghe GK, Diamond MS, Rini J, Sidhu SS

J Mol Biol (2021) 433 pp. 167177-167177 [ DOI: doi:10.1016/j.jmb.2021.167177 Pubmed: 34329642 ]

Sort by: Download
Showing 1 - 4 of 4. Page 1 of 1
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [4]

Current status

  • REL [4]

Sample type

  • Complex [4]
  • Ligand [4]
  • Protein [4]

Organism

  • Severe acute respiratory syndrome coronavirus [4]
  • Homo sapiens [4]

EM Method

  • Single-particle [4]

Resolution

  • ≥ 3Å and < 4Å [1]
  • ≥ 4Å and < 5Å [1]
  • ≥ 5Å and < 6Å [1]
  • ≥ 6Å and < 8Å [1]

Model molecular weight

  • 500-1000 kDa [4]

Release Date

  • 2021 [4]

Author by name

  • Amarasinghe GK [4]
  • Blazer L [4]
  • Brett Case J [4]
  • Capobianchi MR [4]
  • Chen C [4]
  • Chen RE [4]
  • Colavita F [4]
  • Diamond MS [4]
  • Ganaie S [4]
  • Garcia Perez J [4]
  • Gorelik M [4]
  • Gupta JB [4]
  • Jain S [4]
  • Leung DW [4]
  • Li Z [4]
  • Matusali G [4]
  • Miersch S [4]
  • Novelli G [4]
  • Pandolfi PP [4]
  • Pavlenco A [4]
  • Ploder L [4]
  • Rini J [4]
  • Saberianfar R [4]
  • Sidhu SS [4]
  • Singh S [4]
  • Subramania S [4]
  • Ustav M [4]
  • Ye W [4]
  • Rini JM [2]

Author by ORCID

  • Sidhu SS [4]
  • Li Z [4]
  • Matusali G [4]

Journal

  • J MOL BIOL [4]
  • BIORXIV [2]

Software

  • CRYOSPARC [4]

Microscope

  • FEI TITAN KRIOS [4]

Electron Source

  • FIELD EMISSION GUN [4]

Film or detector model

  • FEI FALCON IV 4K X 4K [4]

External links

  • AlphaFold DB [4]
  • ChEBI [4]
  • ChEMBL [4]
  • Complex Portal [4]
  • Gene Ontology [4]
  • InterPro [4]
  • PDB [4]
  • PDBe-Kb [4]
  • Pfam [4]
  • UniProt [4]