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author:"Howes SC"

Filter By

Current Database

  • EMDB [55]
  • EMPIAR [3]

Current status

  • REL [58]

Sample type

  • Cellular component [28]
  • Complex [15]
  • Cell [14]
  • Protein [14]
  • Ligand [9]
  • RNA [1]

Organism

  • Homo sapiens [29]
  • Sus scrofa [8]
  • Mus musculus [7]
  • Equus caballus [6]
  • Saccharomyces cerevisiae [5]
  • Severe acute respiratory syndrome coronavirus [2]
  • Sus scrofa [2]
  • Pyrococcus furiosus [1]
  • Severe acute respiratory syndrome coronavirus [1]

EM Method

  • Subtomogram averaging [41]
  • Helical reconstruction [7]
  • Single-particle [5]
  • Tomography [2]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [5]
  • ≥ 4Å and < 5Å [8]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [11]
  • ≥ 8Å and < 12Å [5]
  • ≥ 16Å and < 20Å [2]
  • ≥ 20Å and < 30Å [2]
  • ≥ 30Å [17]

Model molecular weight

  • 50-100 kDa [3]
  • 100-250 kDa [3]
  • 250-500 kDa [4]
  • 500-1000 kDa [1]
  • 1-2 MDa [1]

Release Date

  • 2025 [5]
  • 2023 [1]
  • 2022 [21]
  • 2021 [22]
  • 2018 [2]
  • 2017 [5]
  • 2016 [2]

Author by name

  • Howes SC [56]
  • Fedry J [24]
  • Forster F [24]
  • Albanese P [23]
  • Chaillet ML [23]
  • Scheltema RA [23]
  • Cuevas Arenas R [22]
  • Gemmer M [22]
  • Koh FA [22]
  • Kotecha A [22]
  • Vismpas D [22]
  • Van Loenhout J [22]
  • Forster FG [21]
  • Grollers-mulderij M [21]
  • Bromfield EG [20]
  • Gadella BM [20]
  • Henning H [20]
  • Leung MR [20]
  • Maitan P [20]
  • Ravi RT [20]
  • Roelofs MC [20]
  • Zeev-ben-mordehai T [20]
  • Zhang M [20]
  • Bloomfield-gadelha H [16]
  • Nogales E [7]
  • Geyer EA [5]
  • Kellogg EH [5]
  • Lafrance B [5]
  • Rice LM [5]
  • Westermann S [5]
  • Zhang R [5]
  • Fedry JMM [4]
  • Heck AJR [4]
  • Hevler JF [4]
  • Zenezini Chiozzi R [4]
  • Akhmanova A [2]
  • Akhmanova A. [2]
  • Beurskens FJ [2]
  • Bosch BJ [2]
  • Cade NI [2]
  • Drulyte I [2]
  • Du W [2]
  • Duellberg C [2]
  • Forth S [2]
  • Gros P [2]
  • Hoogebeen R.A. [2]
  • Hoogebeen RA [2]
  • Howes S.C. [2]
  • Hurdiss DL [2]
  • Kapoor TM [2]
  • Kleiner RE [2]
  • Koning RI [2]
  • Koster AJ [2]
  • Li W [2]
  • Obal G [2]
  • Pamula MC [2]
  • Parren PWHI [2]
  • Roepman R [2]
  • Roepman R. [2]
  • Saunders H.A.J. [2]
  • Saunders HAJ [2]
  • Schuurman J [2]
  • Schweizer D [2]
  • Schweizer D. [2]
  • Sharp TH [2]
  • Stecker K.E. [2]
  • Stecker KE [2]
  • Surrey T [2]
  • Ti SC [2]
  • Ugurlar D [2]
  • Van Den Berg C.M. [2]
  • Wang C [2]
  • De Jong Rn [2]
  • De Kreuk Bj [2]
  • Van Kuppeveld Fjm [2]
  • Van Den Berg Cm [2]
  • Fiala J [1]
  • Foerster F [1]
  • Förster F [1]
  • Gröllers-mulderij M [1]
  • Heck AJ [1]
  • Howes S [1]
  • Kengen SW [1]
  • Patinios C [1]
  • Skalidis I [1]
  • Song W [1]
  • Ti S-C [1]

Author by ORCID

  • Howes SC [31]
  • Forster F [23]
  • Fedry J [23]
  • Chaillet ML [21]
  • Scheltema RA [21]
  • Cuevas Arenas R [21]
  • Kotecha A [21]
  • Maitan P [20]
  • Bromfield EG [20]
  • Ravi RT [20]
  • Roelofs MC [20]
  • Zeev-ben-mordehai T [20]
  • Leung MR [20]
  • Henning H [20]
  • Bloomfield-gadelha H [16]
  • Rice LM [5]
  • Westermann S [5]
  • Nogales E [5]
  • Lafrance B [5]
  • Hevler JF [4]
  • Gadella BM [4]
  • Heck AJR [4]
  • Zenezini Chiozzi R [4]
  • Van Kuppeveld Fjm [2]
  • Obal G [2]
  • Koning RI [2]
  • Saunders HAJ [2]
  • Ugurlar D [2]
  • Surrey T [2]
  • Ti SC [2]
  • Du W [2]
  • Sharp TH [2]
  • Forth S [2]
  • Bosch BJ [2]
  • Parren PWHI [2]
  • Wang C [2]
  • Roepman R [2]
  • Li W [2]
  • Beurskens FJ [2]
  • Gros P [2]
  • Pamula MC [2]
  • Akhmanova A [2]
  • De Jong Rn [2]
  • Schuurman J [2]
  • Cade NI [2]
  • Drulyte I [2]
  • Koster AJ [2]
  • Hurdiss DL [2]
  • Schweizer D [2]

Journal

  • NATURE [22]
  • BIORXIV [16]
  • EMBO J [16]
  • J CELL BIOL [5]
  • NAT STRUCT MOL BIOL [4]
  • PNAS [4]
  • DEV CELL [2]
  • SCI ADV [2]
  • SCIENCE [2]
  • ELIFE [1]

Software

  • RELION [23]
  • PEET [20]
  • PYTOM [20]
  • FREALIGN [6]
  • IMOD [3]
  • CRYOSPARC [1]
  • DYNAMO [1]

Microscope

  • FEI TALOS ARCTICA [41]
  • FEI TITAN [7]
  • FEI TITAN KRIOS [6]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [55]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [52]
  • FEI FALCON II 4K X 4K [1]
  • FEI FALCON IV 4K X 4K [1]
  • GATAN K3 BIOCONTINUUM 6K X 4K [1]

EMPIAR Experiment type

  • EMDB [3]

EMPIAR Image category

  • TILT SERIES [2]
  • MICROGRAPHS - MULTIFRAME [1]

External links

  • EMPIAR [21]
  • AlphaFold DB [14]
  • UniProt [14]
  • PDBe-Kb [13]
  • PDB [12]
  • InterPro [10]
  • Pfam [10]
  • ChEBI [9]
  • Gene Ontology [9]
  • ChEMBL [8]
  • DrugBank [8]
  • Complex Portal [7]
  • CATH [5]
  • EMDB [3]
Sort by: Download
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EMD-53127
Download Map
3D View
Cryo-EM structure of natively purified Rubrerythrin isolated from OSIT assemblies of the anaerobic extremophile P. furiosus
Release date: July 16, 2025
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9qg1
Q-score: 0.4

Song W, Fiala J, Skalidis I, Albanese P, Patinios C, Chaillet ML, Kengen SW, Scheltema RA, Howes SC, Heck AJ, Forster F

eLife (2025) [ DOI: doi:10.7554/elife.106890.1 ]

EMPIAR-12499
Related EMDB
EMD-52359
Dynamic microtubule plus end architecture in presence of EB3.
Release date: April 7, 2025
Dataset size: 75.9 GB
Experiment type: EMDB

Saunders H.A.J., Van den Berg C.M., Hoogebeen R.A., Schweizer D., Stecker K.E., Roepman R., Howes S.C., Akhmanova A.

Nat Struct Mol Biol ()

Image sets:
  • Cryo-ET non-motion corrected multi-frame micrographs of in vitro microtubules grown in presence of EB3
EMD-52359
Download Map
3D View
Raw data
EMPIAR-12499
Dynamic microtubule plus end architecture in presence of EB3.
Release date: Feb. 5, 2025
EM Method: Tomography

Saunders HAJ, van den Berg CM, Hoogebeen RA, Schweizer D, Stecker KE, Roepman R, Howes SC, Akhmanova A

Nat Struct Mol Biol (2025) 32 pp. 979-994 [ DOI: doi:10.1038/s41594-025-01483-y Pubmed: 39856351 ]

EMD-52360
Download Map
3D View
Raw data
EMPIAR-12498
Microtubule plus end architecture in presence of the ciliary tip module.
Release date: Feb. 5, 2025
EM Method: Tomography

Saunders HAJ, van den Berg CM, Hoogebeen RA, Schweizer D, Stecker KE, Roepman R, Howes SC, Akhmanova A

Nat Struct Mol Biol (2025) 32 pp. 979-994 [ DOI: doi:10.1038/s41594-025-01483-y Pubmed: 39856351 ]

EMPIAR-12498
Related EMDB
EMD-52360
Microtubule plus end architecture in presence of the ciliary tip module.
Release date: Feb. 4, 2025
Dataset size: 58.0 GB
Experiment type: EMDB

Saunders H.A.J., Van den Berg C.M., Hoogebeen R.A., Schweizer D., Stecker K.E., Roepman R., Howes S.C., Akhmanova A.

Nat Struct Mol Biol ()

Image sets:
  • Cryo-ET non-motion corrected multi-frame micrographs of in vitro microtubules grown in presence of the ciliary tip module
EMPIAR-11751
Related EMDB
EMD-15888 EMD-15872 EMD-15875 EMD-15877 EMD-15891 EMD-15876 EMD-15880 EMD-15887 EMD-15890 EMD-15870 EMD-15879 EMD-15884 EMD-15878 EMD-15886 EMD-15892 EMD-15874 EMD-15885 EMD-15873 EMD-15871
Micrographs of ER-derived vesicles from HEK293F cells
Release date: Nov. 6, 2023
Dataset size: 1.1 TB
Experiment type: EMDB

Gemmer M, Chaillet ML, van Loenhout J, Cuevas Arenas R, Vismpas D, Gröllers-Mulderij M, Koh FA, Albanese P, Scheltema RA, Howes SC, Kotecha A, Fedry J, Förster F

Nature (2023) 614 pp. 160-167 [ Pubmed: 36697828 DOI: 10.1038/s41586-022-05638-5 ]

Image sets:
  • Unaligned gain-corrected micrographs of tilt-series on ER-derived vesicles from HEK293F cells
EMD-15870
Download Map
3D View
Raw data
EMPIAR-11751
Subtomogram average of the human Sec61-TRAP-OSTA-translocon
Release date: Dec. 7, 2022
Resolution: 7.6 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8b6l
Q-score: 0.133

Gemmer M, Chaillet ML, van Loenhout J, Cuevas Arenas R, Vismpas D, Grollers-Mulderij M, Koh FA, Albanese P, Scheltema RA, Howes SC, Kotecha A, Fedry J, Forster F

Nature (2023) 614 pp. 160-167 [ DOI: doi:10.1038/s41586-022-05638-5 Pubmed: 36697828 ]

EMD-15871
Download Map
3D View
Raw data
EMPIAR-11751
Subtomogram Average of Soluble and ER Membrane-Associated Ribosomes in the Decoding-Sampling State
Release date: Dec. 7, 2022
Resolution: 4.8 Å
EM Method: Subtomogram averaging

Gemmer M, Chaillet ML, van Loenhout J, Cuevas Arenas R, Vismpas D, Grollers-Mulderij M, Koh FA, Albanese P, Scheltema RA, Howes SC, Kotecha A, Fedry J, Forster F

Nature (2023) 614 pp. 160-167 [ DOI: doi:10.1038/s41586-022-05638-5 Pubmed: 36697828 ]

EMD-15872
Download Map
3D View
Raw data
EMPIAR-11751
Subtomogram Average of Soluble and ER Membrane-Associated Ribosomes in the Classical Pre State
Release date: Dec. 7, 2022
Resolution: 4.6 Å
EM Method: Subtomogram averaging

Gemmer M, Chaillet ML, van Loenhout J, Cuevas Arenas R, Vismpas D, Grollers-Mulderij M, Koh FA, Albanese P, Scheltema RA, Howes SC, Kotecha A, Fedry J, Forster F

Nature (2023) 614 pp. 160-167 [ DOI: doi:10.1038/s41586-022-05638-5 Pubmed: 36697828 ]

EMD-15873
Download Map
3D View
Raw data
EMPIAR-11751
Subtomogram Average of Soluble and ER Membrane-Associated Ribosomes in the Classical Pre State
Release date: Dec. 7, 2022
Resolution: 8.0 Å
EM Method: Subtomogram averaging

Gemmer M, Chaillet ML, van Loenhout J, Cuevas Arenas R, Vismpas D, Grollers-Mulderij M, Koh FA, Albanese P, Scheltema RA, Howes SC, Kotecha A, Fedry J, Forster F

Nature (2023) 614 pp. 160-167 [ DOI: doi:10.1038/s41586-022-05638-5 Pubmed: 36697828 ]

Sort by: Download
Showing 1 - 10 of 58. Page 1 of 6
Display:
Statistics
×

Download












































Preview first 10
Download

Filter By

Current Database

  • EMDB [55]
  • EMPIAR [3]

Current status

  • REL [58]

Sample type

  • Cellular component [28]
  • Complex [15]
  • Cell [14]
  • Protein [14]
  • Ligand [9]
  • RNA [1]

Organism

  • Homo sapiens [29]
  • Sus scrofa [8]
  • Mus musculus [7]
  • Equus caballus [6]
  • Saccharomyces cerevisiae [5]
  • Severe acute respiratory syndrome coronavirus [2]
  • Sus scrofa [2]
  • Pyrococcus furiosus [1]
  • Severe acute respiratory syndrome coronavirus [1]

EM Method

  • Subtomogram averaging [41]
  • Helical reconstruction [7]
  • Single-particle [5]
  • Tomography [2]

Resolution

  • ≥ 2Å and < 3Å [1]
  • ≥ 3Å and < 4Å [5]
  • ≥ 4Å and < 5Å [8]
  • ≥ 5Å and < 6Å [2]
  • ≥ 6Å and < 8Å [11]
  • ≥ 8Å and < 12Å [5]
  • ≥ 16Å and < 20Å [2]
  • ≥ 20Å and < 30Å [2]
  • ≥ 30Å [17]

Model molecular weight

  • 50-100 kDa [3]
  • 100-250 kDa [3]
  • 250-500 kDa [4]
  • 500-1000 kDa [1]
  • 1-2 MDa [1]

Release Date

  • 2025 [5]
  • 2023 [1]
  • 2022 [21]
  • 2021 [22]
  • 2018 [2]
  • 2017 [5]
  • 2016 [2]

Author by name

  • Howes SC [56]
  • Fedry J [24]
  • Forster F [24]
  • Albanese P [23]
  • Chaillet ML [23]
  • Scheltema RA [23]
  • Cuevas Arenas R [22]
  • Gemmer M [22]
  • Koh FA [22]
  • Kotecha A [22]
  • Vismpas D [22]
  • Van Loenhout J [22]
  • Forster FG [21]
  • Grollers-mulderij M [21]
  • Bromfield EG [20]
  • Gadella BM [20]
  • Henning H [20]
  • Leung MR [20]
  • Maitan P [20]
  • Ravi RT [20]
  • Roelofs MC [20]
  • Zeev-ben-mordehai T [20]
  • Zhang M [20]
  • Bloomfield-gadelha H [16]
  • Nogales E [7]
  • Geyer EA [5]
  • Kellogg EH [5]
  • Lafrance B [5]
  • Rice LM [5]
  • Westermann S [5]
  • Zhang R [5]
  • Fedry JMM [4]
  • Heck AJR [4]
  • Hevler JF [4]
  • Zenezini Chiozzi R [4]
  • Akhmanova A [2]
  • Akhmanova A. [2]
  • Beurskens FJ [2]
  • Bosch BJ [2]
  • Cade NI [2]
  • Drulyte I [2]
  • Du W [2]
  • Duellberg C [2]
  • Forth S [2]
  • Gros P [2]
  • Hoogebeen R.A. [2]
  • Hoogebeen RA [2]
  • Howes S.C. [2]
  • Hurdiss DL [2]
  • Kapoor TM [2]
  • Kleiner RE [2]
  • Koning RI [2]
  • Koster AJ [2]
  • Li W [2]
  • Obal G [2]
  • Pamula MC [2]
  • Parren PWHI [2]
  • Roepman R [2]
  • Roepman R. [2]
  • Saunders H.A.J. [2]
  • Saunders HAJ [2]
  • Schuurman J [2]
  • Schweizer D [2]
  • Schweizer D. [2]
  • Sharp TH [2]
  • Stecker K.E. [2]
  • Stecker KE [2]
  • Surrey T [2]
  • Ti SC [2]
  • Ugurlar D [2]
  • Van Den Berg C.M. [2]
  • Wang C [2]
  • De Jong Rn [2]
  • De Kreuk Bj [2]
  • Van Kuppeveld Fjm [2]
  • Van Den Berg Cm [2]
  • Fiala J [1]
  • Foerster F [1]
  • Förster F [1]
  • Gröllers-mulderij M [1]
  • Heck AJ [1]
  • Howes S [1]
  • Kengen SW [1]
  • Patinios C [1]
  • Skalidis I [1]
  • Song W [1]
  • Ti S-C [1]

Author by ORCID

  • Howes SC [31]
  • Forster F [23]
  • Fedry J [23]
  • Chaillet ML [21]
  • Scheltema RA [21]
  • Cuevas Arenas R [21]
  • Kotecha A [21]
  • Maitan P [20]
  • Bromfield EG [20]
  • Ravi RT [20]
  • Roelofs MC [20]
  • Zeev-ben-mordehai T [20]
  • Leung MR [20]
  • Henning H [20]
  • Bloomfield-gadelha H [16]
  • Rice LM [5]
  • Westermann S [5]
  • Nogales E [5]
  • Lafrance B [5]
  • Hevler JF [4]
  • Gadella BM [4]
  • Heck AJR [4]
  • Zenezini Chiozzi R [4]
  • Van Kuppeveld Fjm [2]
  • Obal G [2]
  • Koning RI [2]
  • Saunders HAJ [2]
  • Ugurlar D [2]
  • Surrey T [2]
  • Ti SC [2]
  • Du W [2]
  • Sharp TH [2]
  • Forth S [2]
  • Bosch BJ [2]
  • Parren PWHI [2]
  • Wang C [2]
  • Roepman R [2]
  • Li W [2]
  • Beurskens FJ [2]
  • Gros P [2]
  • Pamula MC [2]
  • Akhmanova A [2]
  • De Jong Rn [2]
  • Schuurman J [2]
  • Cade NI [2]
  • Drulyte I [2]
  • Koster AJ [2]
  • Hurdiss DL [2]
  • Schweizer D [2]

Journal

  • NATURE [22]
  • BIORXIV [16]
  • EMBO J [16]
  • J CELL BIOL [5]
  • NAT STRUCT MOL BIOL [4]
  • PNAS [4]
  • DEV CELL [2]
  • SCI ADV [2]
  • SCIENCE [2]
  • ELIFE [1]

Software

  • RELION [23]
  • PEET [20]
  • PYTOM [20]
  • FREALIGN [6]
  • IMOD [3]
  • CRYOSPARC [1]
  • DYNAMO [1]

Microscope

  • FEI TALOS ARCTICA [41]
  • FEI TITAN [7]
  • FEI TITAN KRIOS [6]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [55]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [52]
  • FEI FALCON II 4K X 4K [1]
  • FEI FALCON IV 4K X 4K [1]
  • GATAN K3 BIOCONTINUUM 6K X 4K [1]

EMPIAR Experiment type

  • EMDB [3]

EMPIAR Image category

  • TILT SERIES [2]
  • MICROGRAPHS - MULTIFRAME [1]

External links

  • EMPIAR [21]
  • AlphaFold DB [14]
  • UniProt [14]
  • PDBe-Kb [13]
  • PDB [12]
  • InterPro [10]
  • Pfam [10]
  • ChEBI [9]
  • Gene Ontology [9]
  • ChEMBL [8]
  • DrugBank [8]
  • Complex Portal [7]
  • CATH [5]
  • EMDB [3]