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author:"Ching C"

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Current Database

  • EMDB [6]
  • EMPIAR [1]

Current status

  • REL [7]

Sample type

  • Cell [4]
  • Protein [3]
  • RNA [3]
  • Complex [2]

Organism

  • Mumps orthorubulavirus [6]

EM Method

  • Subtomogram averaging [3]
  • Tomography [3]

Resolution

  • ≥ 4Å and < 5Å [1]
  • ≥ 6Å and < 8Å [2]

Model molecular weight

  • 500-1000 kDa [1]

Release Date

  • 2023 [7]

Author by name

  • Mahamid J [7]
  • Zhang X [7]
  • Becher I [6]
  • Ching C [6]
  • Eugster Oegema C [6]
  • Fung HKH [6]
  • Hyman AA [6]
  • Muller CW [6]
  • Pflaesterer T [6]
  • Poser I [6]
  • Savitski MM [6]
  • Sridharan S [6]
  • Zagoriy I [6]

Author by ORCID

  • Fung HKH [6]
  • Muller CW [6]
  • Zagoriy I [6]

Journal

  • CELL [6]
  • BIORXIV [1]

Software

  • DYNAMO [3]
  • IMOD [3]
  • RELION [3]
  • WARP [3]

Microscope

  • FEI TITAN KRIOS [6]

Electron Source

  • FIELD EMISSION GUN [6]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [4]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]

EMPIAR Experiment type

  • EMDB [1]

EMPIAR Image category

  • TILT SERIES [1]

External links

  • EMPIAR [2]
  • EMDB [1]
  • PDB [1]
  • UniProt [1]
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EMPIAR-10751
Related EMDB
EMD-13136 EMD-13133
Tilt series of authentic mumps virus nucleocapsid isolated from lysate of chronically infected HeLa cells under arsenite stress
Release date: March 13, 2023
Dataset size: 27.9 GB
Experiment type: EMDB

Zhang X, Sridharan S, Zagoriy I, Oegema CE, Ching C, Pflaesterer T, Fung HKH, Poser I, Müller CW, Hyman AA, Savitski MM, Mahamid J

To Be Published

Image sets:
  • Unaligned tilt movies of authentic mumps virus nucleocapsid isolated from lysate of chronically infected HeLa cells under acute arsenite stress
EMD-13133
Download Map
3D View
Raw data
EMPIAR-10751
Subtomogram average of authentic mumps virus nucleocapsid from HeLa cell lysate of long helical pitch
Release date: March 1, 2023
Resolution: 4.5 Å
EM Method: Subtomogram averaging
Fitted PDBs: 7ozr
Q-score: 0.356

Zhang X, Sridharan S, Zagoriy I, Eugster Oegema C, Ching C, Pflaesterer T, Fung HKH, Becher I, Poser I, Muller CW, Hyman AA, Savitski MM, Mahamid J

Cell (2023) 186 pp. 1877-1894.e27 [ Pubmed: 37116470 DOI: doi:10.1016/j.cell.2023.03.015 ]

EMD-13136
Download Map
3D View
Raw data
EMPIAR-10751
Subtomogram average of authentic mumps virus nucleocapsid from HeLa cell lysate of short helical pitch
Release date: March 1, 2023
Resolution: 6.3 Å
EM Method: Subtomogram averaging

Zhang X, Sridharan S, Zagoriy I, Eugster Oegema C, Ching C, Pflaesterer T, Fung HKH, Becher I, Poser I, Muller CW, Hyman AA, Savitski MM, Mahamid J

Cell (2023) 186 pp. 1877-1894.e27 [ Pubmed: 37116470 DOI: doi:10.1016/j.cell.2023.03.015 ]

EMD-13137
Download Map
3D View
In-cell subtomogram average of authentic mumps virus nucleocapsid in HeLa cells
Release date: March 1, 2023
Resolution: 6.5 Å
EM Method: Subtomogram averaging

Zhang X, Sridharan S, Zagoriy I, Eugster Oegema C, Ching C, Pflaesterer T, Fung HKH, Becher I, Poser I, Muller CW, Hyman AA, Savitski MM, Mahamid J

Cell (2023) 186 pp. 1877-1894.e27 [ Pubmed: 37116470 DOI: doi:10.1016/j.cell.2023.03.015 ]

EMD-13165
Download Map
3D View
Mumps viral factory in a non-stressed HeLa cell in a chronic infection stage
Release date: March 1, 2023
EM Method: Tomography

Zhang X, Sridharan S, Zagoriy I, Eugster Oegema C, Ching C, Pflaesterer T, Fung HKH, Becher I, Poser I, Muller CW, Hyman AA, Savitski MM, Mahamid J

Cell (2023) 186 pp. 1877-1894.e27 [ Pubmed: 37116470 DOI: doi:10.1016/j.cell.2023.03.015 ]

EMD-13166
Download Map
3D View
Mumps viral factory at a chronic infection stage in a HeLa cell under acute arsenite stress
Release date: March 1, 2023
EM Method: Tomography

Zhang X, Sridharan S, Zagoriy I, Eugster Oegema C, Ching C, Pflaesterer T, Fung HKH, Becher I, Poser I, Muller CW, Hyman AA, Savitski MM, Mahamid J

Cell (2023) 186 pp. 1877-1894.e27 [ Pubmed: 37116470 DOI: doi:10.1016/j.cell.2023.03.015 ]

EMD-13167
Download Map
3D View
Mumps viral factory at a chronic infection stage in a HeLa cell under prolonged mild arsenite stress
Release date: March 1, 2023
EM Method: Tomography

Zhang X, Sridharan S, Zagoriy I, Eugster Oegema C, Ching C, Pflaesterer T, Fung HKH, Becher I, Poser I, Muller CW, Hyman AA, Savitski MM, Mahamid J

Cell (2023) 186 pp. 1877-1894.e27 [ Pubmed: 37116470 DOI: doi:10.1016/j.cell.2023.03.015 ]

Sort by: Download
Showing 1 - 7 of 7. Page 1 of 1
Display:
Statistics
×

Download












































Preview first 10
Download

Filter By

Current Database

  • EMDB [6]
  • EMPIAR [1]

Current status

  • REL [7]

Sample type

  • Cell [4]
  • Protein [3]
  • RNA [3]
  • Complex [2]

Organism

  • Mumps orthorubulavirus [6]

EM Method

  • Subtomogram averaging [3]
  • Tomography [3]

Resolution

  • ≥ 4Å and < 5Å [1]
  • ≥ 6Å and < 8Å [2]

Model molecular weight

  • 500-1000 kDa [1]

Release Date

  • 2023 [7]

Author by name

  • Mahamid J [7]
  • Zhang X [7]
  • Becher I [6]
  • Ching C [6]
  • Eugster Oegema C [6]
  • Fung HKH [6]
  • Hyman AA [6]
  • Muller CW [6]
  • Pflaesterer T [6]
  • Poser I [6]
  • Savitski MM [6]
  • Sridharan S [6]
  • Zagoriy I [6]

Author by ORCID

  • Fung HKH [6]
  • Muller CW [6]
  • Zagoriy I [6]

Journal

  • CELL [6]
  • BIORXIV [1]

Software

  • DYNAMO [3]
  • IMOD [3]
  • RELION [3]
  • WARP [3]

Microscope

  • FEI TITAN KRIOS [6]

Electron Source

  • FIELD EMISSION GUN [6]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [4]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]

EMPIAR Experiment type

  • EMDB [1]

EMPIAR Image category

  • TILT SERIES [1]

External links

  • EMPIAR [2]
  • EMDB [1]
  • PDB [1]
  • UniProt [1]