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Filter By

Current Database

  • EMDB [54]

Current status

  • REL [54]

Sample type

  • Cell [19]
  • Cellular component [19]
  • Complex [12]
  • Protein [4]
  • Tissue [3]
  • Ligand [2]
  • Virus [2]
  • RNA [1]

Organism

  • Danio rerio [12]
  • Homo sapiens [11]
  • Escherichia coli [4]
  • Mus musculus [3]
  • Allium cepa [3]
  • Escherichia coli [3]
  • Synechocystis sp. pcc 6803 [2]
  • Hiv-1 vector pnl4-3 [2]
  • Venezuelan equine encephalitis virus [1]
  • Acanthamoeba polyphaga mimivirus [1]
  • Limonium bicolor [1]
  • Physcomitrium patens [1]
  • Varicellovirus suidalpha1 [1]
  • Arabidopsis thaliana [1]
  • Toxoplasma gondii [1]
  • Schizosaccharomyces pombe [1]
  • Saccharomyces cerevisiae [1]
  • Plasmodium falciparum [1]
  • Vibrio cholerae [1]
  • Ostreococcus tauri [1]
  • Apis mellifera [1]
  • (no species) [1]
  • Canis lupus [1]
  • Oryctolagus cuniculus [1]

EM Method

  • Tomography [34]
  • Subtomogram averaging [16]
  • Single-particle [4]

Resolution

  • ≥ 3Å and < 4Å [3]
  • ≥ 6Å and < 8Å [1]
  • ≥ 12Å and < 16Å [1]
  • ≥ 16Å and < 20Å [4]
  • ≥ 20Å and < 30Å [9]
  • ≥ 30Å [4]

Model molecular weight

  • 250-500 kDa [1]
  • 2-5 MDa [1]
  • > 10 MDa [1]

Release Date

  • 2026 [4]
  • 2025 [3]
  • 2024 [15]
  • 2023 [13]
  • 2022 [9]
  • 2021 [2]
  • 2020 [1]
  • 2019 [1]
  • 2018 [1]
  • 2017 [3]
  • 2016 [2]

Author by name

  • Kikkawa M [12]
  • Morikawa M [12]
  • Yamaguchi H [12]
  • Baumeister W [8]
  • Wang Y [8]
  • Ananda VY [7]
  • Bernhardt TG [7]
  • Chao LH [7]
  • Navarro PP [7]
  • Vettiger A [7]
  • Carlson LA [6]
  • Dahmane S [6]
  • Mai X [6]
  • Stjepanovic G [6]
  • Ti R [6]
  • Wang N [6]
  • Zhu L [6]
  • Plitzko JM [5]
  • Allolio C [4]
  • Guo Q [4]
  • Jensen GJ [4]
  • Llopis PM [4]
  • Montero Llopis P [4]
  • Bieber A [3]
  • Brenner JA [3]
  • Capitanio C [3]
  • Dickmanns M [3]
  • Dutka P [3]
  • Fassler F [3]
  • Frommer WB [3]
  • Hajdu R [3]
  • Jensen G [3]
  • Kaiser COJ [3]
  • Kazemein Jasemi Ns [3]
  • Li M [3]
  • Loose M [3]
  • Lopez-tavares A [3]
  • Ma J [3]
  • Meyerowitz E [3]
  • Meyerowitz EM [3]
  • Miras M [3]
  • Nicolas WJ [3]
  • Poege M [3]
  • Riggi M [3]
  • Schioetz OH [3]
  • Schmid EW [3]
  • Schulze SX [3]
  • Schur FKM [3]
  • Simon R [3]
  • Walter JC [3]
  • Xu P [3]
  • Zhang L [3]
  • Abe KM [2]
  • Adams DJ [2]
  • Ay S [2]
  • Basta T [2]
  • Brunger AT [2]
  • Burlaud-gaillard J [2]
  • Cai S [2]
  • Chait BT [2]
  • Chen F [2]
  • Cuche C [2]
  • Di Nunzio F [2]
  • Di Santo Jp [2]
  • Diana JS [2]
  • Echeverria I [2]
  • Engel BD [2]
  • Esquivies L [2]
  • Fernandez-martinez J [2]
  • Gan L [2]
  • Gazi A [2]
  • Gazi AD [2]
  • Grant T [2]
  • Gries K [2]
  • Gupta TK [2]
  • Hampton L [2]
  • He Q [2]
  • Heinz S [2]
  • Held RG [2]
  • Holthauzen LM [2]
  • Jian R [2]
  • Jiang L [2]
  • Jiang W [2]
  • Kalichava A [2]
  • Klumpe S [2]
  • Leitz J [2]
  • Li G [2]
  • Lim C [2]
  • Lim CJ [2]
  • Liu J [2]
  • Liu JF [2]
  • Liu JK [2]
  • Lu Z [2]
  • Mammano F [2]
  • Nickelsen J [2]
  • Niemeyer J [2]
  • Ohnishi N [2]
  • Ostermeier M [2]
  • Rast A [2]
  • Reddy MS [2]

Author by ORCID

  • Kikkawa M [12]
  • Yamaguchi H [12]
  • Morikawa M [12]
  • Ananda VY [7]
  • Vettiger A [7]
  • Chao LH [7]
  • Navarro PP [7]
  • Zhu L [6]
  • Wang Y [6]
  • Stjepanovic G [6]
  • Ti R [6]
  • Carlson LA [6]
  • Dahmane S [6]
  • Mai X [6]
  • Allolio C [4]
  • Guo Q [4]
  • Bernhardt TG [4]
  • Nicolas WJ [3]
  • Walter JC [3]
  • Schmid EW [3]
  • Meyerowitz E [3]
  • Brunger AT [2]
  • Abe KM [2]
  • Tatirovsky Y [2]
  • Schroda M [2]
  • Stowell MHB [2]
  • Baumeister W [2]
  • Held RG [2]
  • Diana JS [2]
  • Roingeard P [2]
  • Sakamoto W [2]
  • Heinz S [2]
  • He Q [2]
  • Engel BD [2]
  • Strauss M [2]
  • Adams DJ [2]
  • Esquivies L [2]
  • Gazi A [2]
  • Grant T [2]
  • Zhang L [2]
  • Plitzko JM [2]
  • Di Santo Jp [2]
  • Ay S [2]
  • Ren G [2]
  • Yang K [2]
  • Klumpe S [2]
  • Schuller JM [2]
  • Mammano F [2]
  • Ostermeier M [2]
  • Shen X [2]
  • White MA [2]
  • Cuche C [2]
  • Wang C [2]
  • Jian R [2]
  • Di Nunzio F [2]
  • Lim CJ [2]
  • Echeverria I [2]
  • Smalinskaite L [1]
  • Heumann JM [1]
  • Sanders S [1]
  • Bosse JB [1]
  • Prazak V [1]
  • Hegde RS [1]
  • Lewis AJO [1]
  • Abrahao JS [1]
  • Wang J [1]
  • Jiang Z [1]
  • Schon A [1]
  • Bylund T [1]
  • Shi Y [1]
  • Grunewald K [1]
  • Varberg JM [1]
  • Martinez-sanchez A [1]
  • Schrad JR [1]
  • Young EJ [1]
  • Salfer M [1]
  • Fernandez-busnadiego R [1]
  • Rusu M [1]
  • Cai S [1]
  • Gan L [1]
  • Collado JF [1]
  • Cerutti G [1]
  • Soni N [1]
  • Hagen C [1]
  • Fernandez-martinez J [1]
  • Fang F [1]
  • Keenan RJ [1]
  • Jensen Y [1]
  • Trinick J [1]
  • Cortines JR [1]
  • Grange M [1]
  • Unruh J [1]
  • Kwong PD [1]
  • Ouch C [1]
  • Villa E [1]
  • Duquette M [1]
  • Sutton MS [1]

Journal

  • ELIFE [13]
  • BIORXIV [10]
  • NAT MICROBIOL [6]
  • NAT STRUCT MOL BIOL [6]
  • CELL [5]
  • TO BE PUBLISHED [5]
  • CURR BIOL [3]
  • NATURE [3]
  • EMBO J [2]
  • J BIOL CHEM [2]
  • NAT COMMUN [2]
  • CELL MOL IMMUNOL [1]
  • J MUSCLE RES CELL MOTIL [1]
  • MOL BIOL CELL [1]
  • PLOS COMPUT BIOL [1]
  • VIRUSES [1]

Software

  • IMOD [29]
  • PEET [13]
  • CRYOSPARC [3]
  • IPET [2]
  • TOMOCTF [2]
  • EMAN2 [1]
  • I3 [1]
  • TOMO3D [1]

Microscope

  • TFS KRIOS [30]
  • FEI TITAN KRIOS [14]
  • FEI POLARA 300 [2]
  • FEI TALOS ARCTICA [2]
  • JEOL 1400 [2]
  • ZEISS LIBRA120PLUS [2]
  • JEOL 2100 [1]
  • JEOL 2200FS [1]

Electron Source

  • FIELD EMISSION GUN [49]
  • LAB6 [4]
  • OTHER [1]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [16]
  • GATAN K2 SUMMIT 4K X 4K [14]
  • GATAN K3 6K X 4K [14]
  • FEI FALCON II 4K X 4K [3]
  • GATAN ULTRASCAN 4000 4K X 4K [2]
  • OTHER [2]
  • DIRECT ELECTRON DE-20 5K X 3K [1]
  • GATAN ULTRASCAN 1000 2K X 2K [1]
  • TFS FALCON 4I 4K X 4K [1]

External links

  • PDB [54]
  • EMPIAR [11]
  • Gene Ontology [3]
  • InterPro [3]
  • PDBe-Kb [3]
  • UniProt [3]
  • AlphaFold DB [2]
  • ChEBI [2]
  • ChEMBL [2]
  • Pfam [2]
  • DrugBank [1]
  • SCOP2 [1]
Sort by: Download
Showing 1 - 10 of 54. Page 1 of 6
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EMD-55336
Download Map
3D View
electron tomograms of epon embedded P. falciparum stage V gametocytes with PfMIC19/PfMIC60 double knockout
Positive staining
Release date: June 3, 2026
EM Method: Tomography

Tassan-Lugrezin S, Bregy I, Lopez Orra J, Proellochs NI, van Gemert GJ, Stoter R, Evers F, Kooij TW, van Niftrik L

eLife (2026) [ DOI: doi:10.7554/elife.111002.1 ]

EMD-53134
Download Map
3D View
Cryo-electron tomograms of Arabidopsis thaliana embryos.
CryoEM
Release date: March 25, 2026
EM Method: Tomography

Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

To Be Published

EMD-53136
Download Map
3D View
Cryo-electron tomograms of Limonium bicolor salt gland.
CryoEM
Release date: March 25, 2026
EM Method: Tomography

Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

To Be Published

EMD-53142
Download Map
3D View
Cryo-electron tomograms of Physcomitrium patens phyllids.
CryoEM
Release date: March 25, 2026
EM Method: Tomography

Poege M, Dickmanns M, Xu P, Li M, Schioetz OH, Kaiser COJ, Ma J, Bieber A, Capitanio C, Brenner JA, Riggi M, Miras M, Kazemein Jasemi NS, Schulze SX, Simon R, Frommer WB, Plitzko JM, Baumeister W

To Be Published

EMD-53351
Download Map
3D View
Cryo-electron tomograms of cryo-FIB milled E. coli cells lacking PBP1b.
CryoEM
Release date: April 23, 2025
EM Method: Tomography

Navarro PP, Vettiger A, Hajdu R, Ananda VY, Lopez-Tavares A, Schmid EW, Walter JC, Loose M, Chao LH, Bernhardt TG

bioRxiv (2025) [ Pubmed: 40236067 DOI: doi:10.1101/2025.04.02.646830 ]

EMD-53357
Download Map
3D View
Cryo-electron tomograms of cryo-FIB milled E. coli lacking LpoB.
CryoEM
Release date: April 23, 2025
EM Method: Tomography

Navarro PP, Vettiger A, Hajdu R, Ananda VY, Lopez-Tavares A, Schmid EW, Walter JC, Loose M, Chao LH, Bernhardt TG

bioRxiv (2025) [ Pubmed: 40236067 DOI: doi:10.1101/2025.04.02.646830 ]

EMD-53363
Download Map
3D View
Cryo-electron tomogram of cryo-FIB milled E. coli cells lacking PBP1a
CryoEM
Release date: April 23, 2025
EM Method: Tomography

Navarro PP, Vettiger A, Hajdu R, Ananda VY, Lopez-Tavares A, Schmid EW, Walter JC, Loose M, Chao LH, Bernhardt TG

bioRxiv (2025) [ Pubmed: 40236067 DOI: doi:10.1101/2025.04.02.646830 ]

EMD-51462
Download Map
3D View
Nuclear HIV-1 Condensate
Negative staining
Release date: Dec. 18, 2024
EM Method: Tomography

Ay S, Burlaud-Gaillard J, Gazi A, Tatirovsky Y, Cuche C, Diana JS, Scoca V, Di Santo JP, Roingeard P, Mammano F, Di Nunzio F

EMBO J (2025) 44 pp. 166-199 [ Pubmed: 39623137 DOI: doi:10.1038/s44318-024-00316-w ]

EMD-51466
Download Map
3D View
HIV-1 Nuclear Condensate under NEV treatment
Negative staining
Release date: Dec. 18, 2024
EM Method: Tomography

Ay S, Burlaud-Gaillard J, Gazi A, Tatirovsky Y, Cuche C, Diana JS, Scoca V, Di Santo JP, Roingeard P, Mammano F, Di Nunzio F

EMBO J (2025) 44 pp. 166-199 [ Pubmed: 39623137 DOI: doi:10.1038/s44318-024-00316-w ]

EMD-43619
Download Map
3D View
Raw data
EMPIAR-11963
Human DNA polymerase alpha/primase - AavLEA1 1:8 molar ratio
CryoEM
Release date: Sept. 4, 2024
Resolution: 3.63 Å
EM Method: Single-particle

Abe KM, Li G, He Q, Grant T, Lim CJ

Nat Commun (2024) 15 pp. 7705-7705 [ Pubmed: 39231985 DOI: doi:10.1038/s41467-024-52091-1 ]

Sort by: Download
Showing 1 - 10 of 54. Page 1 of 6
Display:
Statistics
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Filter By

Current Database

  • EMDB [54]

Current status

  • REL [54]

Sample type

  • Cell [19]
  • Cellular component [19]
  • Complex [12]
  • Protein [4]
  • Tissue [3]
  • Ligand [2]
  • Virus [2]
  • RNA [1]

Organism

  • Danio rerio [12]
  • Homo sapiens [11]
  • Escherichia coli [4]
  • Mus musculus [3]
  • Allium cepa [3]
  • Escherichia coli [3]
  • Synechocystis sp. pcc 6803 [2]
  • Hiv-1 vector pnl4-3 [2]
  • Venezuelan equine encephalitis virus [1]
  • Acanthamoeba polyphaga mimivirus [1]
  • Limonium bicolor [1]
  • Physcomitrium patens [1]
  • Varicellovirus suidalpha1 [1]
  • Arabidopsis thaliana [1]
  • Toxoplasma gondii [1]
  • Schizosaccharomyces pombe [1]
  • Saccharomyces cerevisiae [1]
  • Plasmodium falciparum [1]
  • Vibrio cholerae [1]
  • Ostreococcus tauri [1]
  • Apis mellifera [1]
  • (no species) [1]
  • Canis lupus [1]
  • Oryctolagus cuniculus [1]

EM Method

  • Tomography [34]
  • Subtomogram averaging [16]
  • Single-particle [4]

Resolution

  • ≥ 3Å and < 4Å [3]
  • ≥ 6Å and < 8Å [1]
  • ≥ 12Å and < 16Å [1]
  • ≥ 16Å and < 20Å [4]
  • ≥ 20Å and < 30Å [9]
  • ≥ 30Å [4]

Model molecular weight

  • 250-500 kDa [1]
  • 2-5 MDa [1]
  • > 10 MDa [1]

Release Date

  • 2026 [4]
  • 2025 [3]
  • 2024 [15]
  • 2023 [13]
  • 2022 [9]
  • 2021 [2]
  • 2020 [1]
  • 2019 [1]
  • 2018 [1]
  • 2017 [3]
  • 2016 [2]

Author by name

  • Kikkawa M [12]
  • Morikawa M [12]
  • Yamaguchi H [12]
  • Baumeister W [8]
  • Wang Y [8]
  • Ananda VY [7]
  • Bernhardt TG [7]
  • Chao LH [7]
  • Navarro PP [7]
  • Vettiger A [7]
  • Carlson LA [6]
  • Dahmane S [6]
  • Mai X [6]
  • Stjepanovic G [6]
  • Ti R [6]
  • Wang N [6]
  • Zhu L [6]
  • Plitzko JM [5]
  • Allolio C [4]
  • Guo Q [4]
  • Jensen GJ [4]
  • Llopis PM [4]
  • Montero Llopis P [4]
  • Bieber A [3]
  • Brenner JA [3]
  • Capitanio C [3]
  • Dickmanns M [3]
  • Dutka P [3]
  • Fassler F [3]
  • Frommer WB [3]
  • Hajdu R [3]
  • Jensen G [3]
  • Kaiser COJ [3]
  • Kazemein Jasemi Ns [3]
  • Li M [3]
  • Loose M [3]
  • Lopez-tavares A [3]
  • Ma J [3]
  • Meyerowitz E [3]
  • Meyerowitz EM [3]
  • Miras M [3]
  • Nicolas WJ [3]
  • Poege M [3]
  • Riggi M [3]
  • Schioetz OH [3]
  • Schmid EW [3]
  • Schulze SX [3]
  • Schur FKM [3]
  • Simon R [3]
  • Walter JC [3]
  • Xu P [3]
  • Zhang L [3]
  • Abe KM [2]
  • Adams DJ [2]
  • Ay S [2]
  • Basta T [2]
  • Brunger AT [2]
  • Burlaud-gaillard J [2]
  • Cai S [2]
  • Chait BT [2]
  • Chen F [2]
  • Cuche C [2]
  • Di Nunzio F [2]
  • Di Santo Jp [2]
  • Diana JS [2]
  • Echeverria I [2]
  • Engel BD [2]
  • Esquivies L [2]
  • Fernandez-martinez J [2]
  • Gan L [2]
  • Gazi A [2]
  • Gazi AD [2]
  • Grant T [2]
  • Gries K [2]
  • Gupta TK [2]
  • Hampton L [2]
  • He Q [2]
  • Heinz S [2]
  • Held RG [2]
  • Holthauzen LM [2]
  • Jian R [2]
  • Jiang L [2]
  • Jiang W [2]
  • Kalichava A [2]
  • Klumpe S [2]
  • Leitz J [2]
  • Li G [2]
  • Lim C [2]
  • Lim CJ [2]
  • Liu J [2]
  • Liu JF [2]
  • Liu JK [2]
  • Lu Z [2]
  • Mammano F [2]
  • Nickelsen J [2]
  • Niemeyer J [2]
  • Ohnishi N [2]
  • Ostermeier M [2]
  • Rast A [2]
  • Reddy MS [2]

Author by ORCID

  • Kikkawa M [12]
  • Yamaguchi H [12]
  • Morikawa M [12]
  • Ananda VY [7]
  • Vettiger A [7]
  • Chao LH [7]
  • Navarro PP [7]
  • Zhu L [6]
  • Wang Y [6]
  • Stjepanovic G [6]
  • Ti R [6]
  • Carlson LA [6]
  • Dahmane S [6]
  • Mai X [6]
  • Allolio C [4]
  • Guo Q [4]
  • Bernhardt TG [4]
  • Nicolas WJ [3]
  • Walter JC [3]
  • Schmid EW [3]
  • Meyerowitz E [3]
  • Brunger AT [2]
  • Abe KM [2]
  • Tatirovsky Y [2]
  • Schroda M [2]
  • Stowell MHB [2]
  • Baumeister W [2]
  • Held RG [2]
  • Diana JS [2]
  • Roingeard P [2]
  • Sakamoto W [2]
  • Heinz S [2]
  • He Q [2]
  • Engel BD [2]
  • Strauss M [2]
  • Adams DJ [2]
  • Esquivies L [2]
  • Gazi A [2]
  • Grant T [2]
  • Zhang L [2]
  • Plitzko JM [2]
  • Di Santo Jp [2]
  • Ay S [2]
  • Ren G [2]
  • Yang K [2]
  • Klumpe S [2]
  • Schuller JM [2]
  • Mammano F [2]
  • Ostermeier M [2]
  • Shen X [2]
  • White MA [2]
  • Cuche C [2]
  • Wang C [2]
  • Jian R [2]
  • Di Nunzio F [2]
  • Lim CJ [2]
  • Echeverria I [2]
  • Smalinskaite L [1]
  • Heumann JM [1]
  • Sanders S [1]
  • Bosse JB [1]
  • Prazak V [1]
  • Hegde RS [1]
  • Lewis AJO [1]
  • Abrahao JS [1]
  • Wang J [1]
  • Jiang Z [1]
  • Schon A [1]
  • Bylund T [1]
  • Shi Y [1]
  • Grunewald K [1]
  • Varberg JM [1]
  • Martinez-sanchez A [1]
  • Schrad JR [1]
  • Young EJ [1]
  • Salfer M [1]
  • Fernandez-busnadiego R [1]
  • Rusu M [1]
  • Cai S [1]
  • Gan L [1]
  • Collado JF [1]
  • Cerutti G [1]
  • Soni N [1]
  • Hagen C [1]
  • Fernandez-martinez J [1]
  • Fang F [1]
  • Keenan RJ [1]
  • Jensen Y [1]
  • Trinick J [1]
  • Cortines JR [1]
  • Grange M [1]
  • Unruh J [1]
  • Kwong PD [1]
  • Ouch C [1]
  • Villa E [1]
  • Duquette M [1]
  • Sutton MS [1]

Journal

  • ELIFE [13]
  • BIORXIV [10]
  • NAT MICROBIOL [6]
  • NAT STRUCT MOL BIOL [6]
  • CELL [5]
  • TO BE PUBLISHED [5]
  • CURR BIOL [3]
  • NATURE [3]
  • EMBO J [2]
  • J BIOL CHEM [2]
  • NAT COMMUN [2]
  • CELL MOL IMMUNOL [1]
  • J MUSCLE RES CELL MOTIL [1]
  • MOL BIOL CELL [1]
  • PLOS COMPUT BIOL [1]
  • VIRUSES [1]

Software

  • IMOD [29]
  • PEET [13]
  • CRYOSPARC [3]
  • IPET [2]
  • TOMOCTF [2]
  • EMAN2 [1]
  • I3 [1]
  • TOMO3D [1]

Microscope

  • TFS KRIOS [30]
  • FEI TITAN KRIOS [14]
  • FEI POLARA 300 [2]
  • FEI TALOS ARCTICA [2]
  • JEOL 1400 [2]
  • ZEISS LIBRA120PLUS [2]
  • JEOL 2100 [1]
  • JEOL 2200FS [1]

Electron Source

  • FIELD EMISSION GUN [49]
  • LAB6 [4]
  • OTHER [1]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [16]
  • GATAN K2 SUMMIT 4K X 4K [14]
  • GATAN K3 6K X 4K [14]
  • FEI FALCON II 4K X 4K [3]
  • GATAN ULTRASCAN 4000 4K X 4K [2]
  • OTHER [2]
  • DIRECT ELECTRON DE-20 5K X 3K [1]
  • GATAN ULTRASCAN 1000 2K X 2K [1]
  • TFS FALCON 4I 4K X 4K [1]

External links

  • PDB [54]
  • EMPIAR [11]
  • Gene Ontology [3]
  • InterPro [3]
  • PDBe-Kb [3]
  • UniProt [3]
  • AlphaFold DB [2]
  • ChEBI [2]
  • ChEMBL [2]
  • Pfam [2]
  • DrugBank [1]
  • SCOP2 [1]