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Filter By

Current Database

  • EMDB [50]

Current status

  • REL [50]

Sample type

  • Cellular component [19]
  • Cell [18]
  • Complex [12]
  • Protein [4]
  • Ligand [2]
  • Virus [2]
  • RNA [1]

Organism

  • Danio rerio [12]
  • Homo sapiens [11]
  • Escherichia coli [4]
  • Mus musculus [3]
  • Allium cepa [3]
  • Escherichia coli [3]
  • Synechocystis sp. pcc 6803 [2]
  • Hiv-1 vector pnl4-3 [2]
  • Venezuelan equine encephalitis virus [1]
  • Acanthamoeba polyphaga mimivirus [1]
  • Varicellovirus suidalpha1 [1]
  • Toxoplasma gondii [1]
  • Schizosaccharomyces pombe [1]
  • Saccharomyces cerevisiae [1]
  • Vibrio cholerae [1]
  • Ostreococcus tauri [1]
  • Apis mellifera [1]
  • (no species) [1]
  • Canis lupus [1]
  • Oryctolagus cuniculus [1]

EM Method

  • Tomography [30]
  • Subtomogram averaging [16]
  • Single-particle [4]

Resolution

  • ≥ 3Å and < 4Å [3]
  • ≥ 6Å and < 8Å [1]
  • ≥ 12Å and < 16Å [1]
  • ≥ 16Å and < 20Å [4]
  • ≥ 20Å and < 30Å [9]
  • ≥ 30Å [4]

Model molecular weight

  • 250-500 kDa [1]
  • 2-5 MDa [1]
  • > 10 MDa [1]

Release Date

  • 2025 [3]
  • 2024 [15]
  • 2023 [13]
  • 2022 [9]
  • 2021 [2]
  • 2020 [1]
  • 2019 [1]
  • 2018 [1]
  • 2017 [3]
  • 2016 [2]

Author by name

  • Kikkawa M [12]
  • Morikawa M [12]
  • Yamaguchi H [12]
  • Wang Y [8]
  • Ananda VY [7]
  • Bernhardt TG [7]
  • Chao LH [7]
  • Navarro PP [7]
  • Vettiger A [7]
  • Carlson LA [6]
  • Dahmane S [6]
  • Mai X [6]
  • Stjepanovic G [6]
  • Ti R [6]
  • Wang N [6]
  • Zhu L [6]
  • Baumeister W [5]
  • Allolio C [4]
  • Guo Q [4]
  • Jensen GJ [4]
  • Llopis PM [4]
  • Montero Llopis P [4]
  • Dutka P [3]
  • Fassler F [3]
  • Hajdu R [3]
  • Jensen G [3]
  • Loose M [3]
  • Lopez-tavares A [3]
  • Meyerowitz E [3]
  • Meyerowitz EM [3]
  • Nicolas WJ [3]
  • Schmid EW [3]
  • Schur FKM [3]
  • Walter JC [3]
  • Zhang L [3]
  • Abe KM [2]
  • Adams DJ [2]
  • Ay S [2]
  • Basta T [2]
  • Brunger AT [2]
  • Burlaud-gaillard J [2]
  • Cai S [2]
  • Chait BT [2]
  • Chen F [2]
  • Cuche C [2]
  • Di Nunzio F [2]
  • Di Santo Jp [2]
  • Diana JS [2]
  • Echeverria I [2]
  • Engel BD [2]
  • Esquivies L [2]
  • Fernandez-martinez J [2]
  • Gan L [2]
  • Gazi A [2]
  • Gazi AD [2]
  • Grant T [2]
  • Gries K [2]
  • Gupta TK [2]
  • Hampton L [2]
  • He Q [2]
  • Heinz S [2]
  • Held RG [2]
  • Holthauzen LM [2]
  • Jian R [2]
  • Jiang L [2]
  • Jiang W [2]
  • Kalichava A [2]
  • Klumpe S [2]
  • Leitz J [2]
  • Li G [2]
  • Lim C [2]
  • Lim CJ [2]
  • Liu J [2]
  • Liu JF [2]
  • Liu JK [2]
  • Lu Z [2]
  • Mammano F [2]
  • Nickelsen J [2]
  • Niemeyer J [2]
  • Ohnishi N [2]
  • Ostermeier M [2]
  • Plitzko JM [2]
  • Rast A [2]
  • Reddy MS [2]
  • Reddy MV [2]
  • Ren G [2]
  • Roingeard P [2]
  • Rout MP [2]
  • Rudack T [2]
  • Rudenko G [2]
  • Sakamoto W [2]
  • Sali A [2]
  • Schaffer M [2]
  • Schroda M [2]
  • Schuller JM [2]
  • Scoca V [2]
  • Seshadrinathan S [2]
  • Shen X [2]
  • Shi J [2]
  • Shi Y [2]

Author by ORCID

  • Kikkawa M [12]
  • Yamaguchi H [12]
  • Morikawa M [12]
  • Ananda VY [7]
  • Vettiger A [7]
  • Chao LH [7]
  • Navarro PP [7]
  • Zhu L [6]
  • Wang Y [6]
  • Stjepanovic G [6]
  • Ti R [6]
  • Carlson LA [6]
  • Mai X [6]
  • Allolio C [4]
  • Guo Q [4]
  • Bernhardt TG [4]
  • Nicolas WJ [3]
  • Walter JC [3]
  • Schmid EW [3]
  • Meyerowitz E [3]
  • Brunger AT [2]
  • Abe KM [2]
  • Schroda M [2]
  • Stowell MHB [2]
  • Baumeister W [2]
  • Held RG [2]
  • Diana JS [2]
  • Roingeard P [2]
  • Sakamoto W [2]
  • Heinz S [2]
  • He Q [2]
  • Engel BD [2]
  • Strauss M [2]
  • Adams DJ [2]
  • Esquivies L [2]
  • Gazi A [2]
  • Grant T [2]
  • Zhang L [2]
  • Plitzko JM [2]
  • Di Santo Jp [2]
  • Ay S [2]
  • Ren G [2]
  • Yang K [2]
  • Klumpe S [2]
  • Schuller JM [2]
  • Mammano F [2]
  • Shen X [2]
  • White MA [2]
  • Wang C [2]
  • Jian R [2]
  • Di Nunzio F [2]
  • Lim CJ [2]
  • Echeverria I [2]
  • Smalinskaite L [1]
  • Heumann JM [1]
  • Sanders S [1]
  • Bosse JB [1]
  • Prazak V [1]
  • Hegde RS [1]
  • Lewis AJO [1]
  • Abrahao JS [1]
  • Wang J [1]
  • Jiang Z [1]
  • Bylund T [1]
  • Shi Y [1]
  • Grunewald K [1]
  • Varberg JM [1]
  • Martinez-sanchez A [1]
  • Schrad JR [1]
  • Young EJ [1]
  • Salfer M [1]
  • Fernandez-busnadiego R [1]
  • Rusu M [1]
  • Cai S [1]
  • Gan L [1]
  • Collado JF [1]
  • Cerutti G [1]
  • Hagen C [1]
  • Fernandez-martinez J [1]
  • Fang F [1]
  • Keenan RJ [1]
  • Jensen Y [1]
  • Trinick J [1]
  • Cortines JR [1]
  • Grange M [1]
  • Unruh J [1]
  • Kwong PD [1]
  • Ouch C [1]
  • Villa E [1]
  • Sutton MS [1]

Journal

  • ELIFE [12]
  • BIORXIV [10]
  • NAT MICROBIOL [6]
  • NAT STRUCT MOL BIOL [6]
  • CELL [5]
  • CURR BIOL [3]
  • NATURE [3]
  • EMBO J [2]
  • J BIOL CHEM [2]
  • NAT COMMUN [2]
  • TO BE PUBLISHED [2]
  • CELL MOL IMMUNOL [1]
  • J MUSCLE RES CELL MOTIL [1]
  • MOL BIOL CELL [1]
  • PLOS COMPUT BIOL [1]
  • VIRUSES [1]

Software

  • IMOD [28]
  • PEET [13]
  • CRYOSPARC [3]
  • IPET [2]
  • TOMOCTF [2]
  • EMAN2 [1]
  • I3 [1]
  • TOMO3D [1]

Microscope

  • TFS KRIOS [27]
  • FEI TITAN KRIOS [14]
  • FEI POLARA 300 [2]
  • FEI TALOS ARCTICA [2]
  • JEOL 1400 [2]
  • ZEISS LIBRA120PLUS [2]
  • JEOL 2200FS [1]

Electron Source

  • FIELD EMISSION GUN [46]
  • LAB6 [4]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [16]
  • GATAN K3 6K X 4K [14]
  • GATAN K2 SUMMIT 4K X 4K [12]
  • FEI FALCON II 4K X 4K [3]
  • GATAN ULTRASCAN 4000 4K X 4K [2]
  • OTHER [2]
  • DIRECT ELECTRON DE-20 5K X 3K [1]

External links

  • EMPIAR [11]
  • Gene Ontology [3]
  • InterPro [3]
  • PDB [3]
  • PDBe-Kb [3]
  • UniProt [3]
  • AlphaFold DB [2]
  • ChEBI [2]
  • ChEMBL [2]
  • Pfam [2]
  • DrugBank [1]
  • SCOP2 [1]
Sort by: Download
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Preview first 10
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EMD-53351
Download Map
3D View
Cryo-electron tomograms of cryo-FIB milled E. coli cells lacking PBP1b.
Release date: April 23, 2025
EM Method: Tomography

Navarro PP, Vettiger A, Hajdu R, Ananda VY, Lopez-Tavares A, Schmid EW, Walter JC, Loose M, Chao LH, Bernhardt TG

bioRxiv (2025) [ Pubmed: 40236067 DOI: doi:10.1101/2025.04.02.646830 ]

EMD-53357
Download Map
3D View
Cryo-electron tomograms of cryo-FIB milled E. coli lacking LpoB.
Release date: April 23, 2025
EM Method: Tomography

Navarro PP, Vettiger A, Hajdu R, Ananda VY, Lopez-Tavares A, Schmid EW, Walter JC, Loose M, Chao LH, Bernhardt TG

bioRxiv (2025) [ Pubmed: 40236067 DOI: doi:10.1101/2025.04.02.646830 ]

EMD-53363
Download Map
3D View
Cryo-electron tomogram of cryo-FIB milled E. coli cells lacking PBP1a
Release date: April 23, 2025
EM Method: Tomography

Navarro PP, Vettiger A, Hajdu R, Ananda VY, Lopez-Tavares A, Schmid EW, Walter JC, Loose M, Chao LH, Bernhardt TG

bioRxiv (2025) [ Pubmed: 40236067 DOI: doi:10.1101/2025.04.02.646830 ]

EMD-51462
Download Map
3D View
Nuclear HIV-1 Condensate
Release date: Dec. 18, 2024
EM Method: Tomography

Ay S, Burlaud-Gaillard J, Gazi A, Tatirovsky Y, Cuche C, Diana JS, Scoca V, Di Santo JP, Roingeard P, Mammano F, Di Nunzio F

EMBO J (2025) 44 pp. 166-199 [ Pubmed: 39623137 DOI: doi:10.1038/s44318-024-00316-w ]

EMD-51466
Download Map
3D View
HIV-1 Nuclear Condensate under NEV treatment
Release date: Dec. 18, 2024
EM Method: Tomography

Ay S, Burlaud-Gaillard J, Gazi A, Tatirovsky Y, Cuche C, Diana JS, Scoca V, Di Santo JP, Roingeard P, Mammano F, Di Nunzio F

EMBO J (2025) 44 pp. 166-199 [ Pubmed: 39623137 DOI: doi:10.1038/s44318-024-00316-w ]

EMD-43619
Download Map
3D View
Raw data
EMPIAR-11963
Human DNA polymerase alpha/primase - AavLEA1 1:8 molar ratio
Release date: Sept. 4, 2024
Resolution: 3.63 Å
EM Method: Single-particle

Abe KM, Li G, He Q, Grant T, Lim CJ

Nat Commun (2024) 15 pp. 7705-7705 [ Pubmed: 39231985 DOI: doi:10.1038/s41467-024-52091-1 ]

EMD-43621
Download Map
3D View
Raw data
EMPIAR-11976
Human PRC2 - RvLEAM short 1:6 molar ratio
Release date: Sept. 4, 2024
Resolution: 3.76 Å
EM Method: Single-particle

Abe KM, Li G, He Q, Grant T, Lim CJ

Nat Commun (2024) 15 pp. 7705-7705 [ Pubmed: 39231985 DOI: doi:10.1038/s41467-024-52091-1 ]

EMD-44381
Composite map
Download Map
3D View
In-cell Toxoplasma gondii nuclear pore complex
Release date: Aug. 21, 2024
Resolution: 50.0 Å
EM Method: Subtomogram averaging

Singh D, Soni N, Hutchings J, Echeverria I, Shaikh F, Duquette M, Suslov S, Li Z, van Eeuwen T, Molloy K, Shi Y, Wang J, Guo Q, Chait BT, Fernandez-Martinez J, Rout MP, Sali A, Villa E

Cell (2024) 187 pp. 5267-5281.e13 [ Pubmed: 39127037 DOI: doi:10.1016/j.cell.2024.07.020 ]

EMD-35019
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3D View
MAVS fibrils surrounding the mitochondria
Release date: July 10, 2024
EM Method: Tomography

Yu X, Wang P, Zhou N, Zhang L, Gong X, Guo Q, Jiang Z

Cell Mol Immunol (2026) [ DOI: doi:10.1038/s41423-025-01382-8 Pubmed: 41495444 ]

EMD-50658
Download Map
3D View
Cryo-electron tomogram of ATG2A and small unilamellar vesicles
Release date: June 26, 2024
EM Method: Tomography

Wang Y, Dahmane S, Ti R, Mai X, Zhu L, Carlson LA, Stjepanovic G

Nat Struct Mol Biol (2025) 32 pp. 35-47 [ DOI: doi:10.1038/s41594-024-01376-6 Pubmed: 39174844 ]

Sort by: Download
Showing 1 - 10 of 50. Page 1 of 5
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMDB [50]

Current status

  • REL [50]

Sample type

  • Cellular component [19]
  • Cell [18]
  • Complex [12]
  • Protein [4]
  • Ligand [2]
  • Virus [2]
  • RNA [1]

Organism

  • Danio rerio [12]
  • Homo sapiens [11]
  • Escherichia coli [4]
  • Mus musculus [3]
  • Allium cepa [3]
  • Escherichia coli [3]
  • Synechocystis sp. pcc 6803 [2]
  • Hiv-1 vector pnl4-3 [2]
  • Venezuelan equine encephalitis virus [1]
  • Acanthamoeba polyphaga mimivirus [1]
  • Varicellovirus suidalpha1 [1]
  • Toxoplasma gondii [1]
  • Schizosaccharomyces pombe [1]
  • Saccharomyces cerevisiae [1]
  • Vibrio cholerae [1]
  • Ostreococcus tauri [1]
  • Apis mellifera [1]
  • (no species) [1]
  • Canis lupus [1]
  • Oryctolagus cuniculus [1]

EM Method

  • Tomography [30]
  • Subtomogram averaging [16]
  • Single-particle [4]

Resolution

  • ≥ 3Å and < 4Å [3]
  • ≥ 6Å and < 8Å [1]
  • ≥ 12Å and < 16Å [1]
  • ≥ 16Å and < 20Å [4]
  • ≥ 20Å and < 30Å [9]
  • ≥ 30Å [4]

Model molecular weight

  • 250-500 kDa [1]
  • 2-5 MDa [1]
  • > 10 MDa [1]

Release Date

  • 2025 [3]
  • 2024 [15]
  • 2023 [13]
  • 2022 [9]
  • 2021 [2]
  • 2020 [1]
  • 2019 [1]
  • 2018 [1]
  • 2017 [3]
  • 2016 [2]

Author by name

  • Kikkawa M [12]
  • Morikawa M [12]
  • Yamaguchi H [12]
  • Wang Y [8]
  • Ananda VY [7]
  • Bernhardt TG [7]
  • Chao LH [7]
  • Navarro PP [7]
  • Vettiger A [7]
  • Carlson LA [6]
  • Dahmane S [6]
  • Mai X [6]
  • Stjepanovic G [6]
  • Ti R [6]
  • Wang N [6]
  • Zhu L [6]
  • Baumeister W [5]
  • Allolio C [4]
  • Guo Q [4]
  • Jensen GJ [4]
  • Llopis PM [4]
  • Montero Llopis P [4]
  • Dutka P [3]
  • Fassler F [3]
  • Hajdu R [3]
  • Jensen G [3]
  • Loose M [3]
  • Lopez-tavares A [3]
  • Meyerowitz E [3]
  • Meyerowitz EM [3]
  • Nicolas WJ [3]
  • Schmid EW [3]
  • Schur FKM [3]
  • Walter JC [3]
  • Zhang L [3]
  • Abe KM [2]
  • Adams DJ [2]
  • Ay S [2]
  • Basta T [2]
  • Brunger AT [2]
  • Burlaud-gaillard J [2]
  • Cai S [2]
  • Chait BT [2]
  • Chen F [2]
  • Cuche C [2]
  • Di Nunzio F [2]
  • Di Santo Jp [2]
  • Diana JS [2]
  • Echeverria I [2]
  • Engel BD [2]
  • Esquivies L [2]
  • Fernandez-martinez J [2]
  • Gan L [2]
  • Gazi A [2]
  • Gazi AD [2]
  • Grant T [2]
  • Gries K [2]
  • Gupta TK [2]
  • Hampton L [2]
  • He Q [2]
  • Heinz S [2]
  • Held RG [2]
  • Holthauzen LM [2]
  • Jian R [2]
  • Jiang L [2]
  • Jiang W [2]
  • Kalichava A [2]
  • Klumpe S [2]
  • Leitz J [2]
  • Li G [2]
  • Lim C [2]
  • Lim CJ [2]
  • Liu J [2]
  • Liu JF [2]
  • Liu JK [2]
  • Lu Z [2]
  • Mammano F [2]
  • Nickelsen J [2]
  • Niemeyer J [2]
  • Ohnishi N [2]
  • Ostermeier M [2]
  • Plitzko JM [2]
  • Rast A [2]
  • Reddy MS [2]
  • Reddy MV [2]
  • Ren G [2]
  • Roingeard P [2]
  • Rout MP [2]
  • Rudack T [2]
  • Rudenko G [2]
  • Sakamoto W [2]
  • Sali A [2]
  • Schaffer M [2]
  • Schroda M [2]
  • Schuller JM [2]
  • Scoca V [2]
  • Seshadrinathan S [2]
  • Shen X [2]
  • Shi J [2]
  • Shi Y [2]

Author by ORCID

  • Kikkawa M [12]
  • Yamaguchi H [12]
  • Morikawa M [12]
  • Ananda VY [7]
  • Vettiger A [7]
  • Chao LH [7]
  • Navarro PP [7]
  • Zhu L [6]
  • Wang Y [6]
  • Stjepanovic G [6]
  • Ti R [6]
  • Carlson LA [6]
  • Mai X [6]
  • Allolio C [4]
  • Guo Q [4]
  • Bernhardt TG [4]
  • Nicolas WJ [3]
  • Walter JC [3]
  • Schmid EW [3]
  • Meyerowitz E [3]
  • Brunger AT [2]
  • Abe KM [2]
  • Schroda M [2]
  • Stowell MHB [2]
  • Baumeister W [2]
  • Held RG [2]
  • Diana JS [2]
  • Roingeard P [2]
  • Sakamoto W [2]
  • Heinz S [2]
  • He Q [2]
  • Engel BD [2]
  • Strauss M [2]
  • Adams DJ [2]
  • Esquivies L [2]
  • Gazi A [2]
  • Grant T [2]
  • Zhang L [2]
  • Plitzko JM [2]
  • Di Santo Jp [2]
  • Ay S [2]
  • Ren G [2]
  • Yang K [2]
  • Klumpe S [2]
  • Schuller JM [2]
  • Mammano F [2]
  • Shen X [2]
  • White MA [2]
  • Wang C [2]
  • Jian R [2]
  • Di Nunzio F [2]
  • Lim CJ [2]
  • Echeverria I [2]
  • Smalinskaite L [1]
  • Heumann JM [1]
  • Sanders S [1]
  • Bosse JB [1]
  • Prazak V [1]
  • Hegde RS [1]
  • Lewis AJO [1]
  • Abrahao JS [1]
  • Wang J [1]
  • Jiang Z [1]
  • Bylund T [1]
  • Shi Y [1]
  • Grunewald K [1]
  • Varberg JM [1]
  • Martinez-sanchez A [1]
  • Schrad JR [1]
  • Young EJ [1]
  • Salfer M [1]
  • Fernandez-busnadiego R [1]
  • Rusu M [1]
  • Cai S [1]
  • Gan L [1]
  • Collado JF [1]
  • Cerutti G [1]
  • Hagen C [1]
  • Fernandez-martinez J [1]
  • Fang F [1]
  • Keenan RJ [1]
  • Jensen Y [1]
  • Trinick J [1]
  • Cortines JR [1]
  • Grange M [1]
  • Unruh J [1]
  • Kwong PD [1]
  • Ouch C [1]
  • Villa E [1]
  • Sutton MS [1]

Journal

  • ELIFE [12]
  • BIORXIV [10]
  • NAT MICROBIOL [6]
  • NAT STRUCT MOL BIOL [6]
  • CELL [5]
  • CURR BIOL [3]
  • NATURE [3]
  • EMBO J [2]
  • J BIOL CHEM [2]
  • NAT COMMUN [2]
  • TO BE PUBLISHED [2]
  • CELL MOL IMMUNOL [1]
  • J MUSCLE RES CELL MOTIL [1]
  • MOL BIOL CELL [1]
  • PLOS COMPUT BIOL [1]
  • VIRUSES [1]

Software

  • IMOD [28]
  • PEET [13]
  • CRYOSPARC [3]
  • IPET [2]
  • TOMOCTF [2]
  • EMAN2 [1]
  • I3 [1]
  • TOMO3D [1]

Microscope

  • TFS KRIOS [27]
  • FEI TITAN KRIOS [14]
  • FEI POLARA 300 [2]
  • FEI TALOS ARCTICA [2]
  • JEOL 1400 [2]
  • ZEISS LIBRA120PLUS [2]
  • JEOL 2200FS [1]

Electron Source

  • FIELD EMISSION GUN [46]
  • LAB6 [4]

Film or detector model

  • GATAN K3 BIOQUANTUM 6K X 4K [16]
  • GATAN K3 6K X 4K [14]
  • GATAN K2 SUMMIT 4K X 4K [12]
  • FEI FALCON II 4K X 4K [3]
  • GATAN ULTRASCAN 4000 4K X 4K [2]
  • OTHER [2]
  • DIRECT ELECTRON DE-20 5K X 3K [1]

External links

  • EMPIAR [11]
  • Gene Ontology [3]
  • InterPro [3]
  • PDB [3]
  • PDBe-Kb [3]
  • UniProt [3]
  • AlphaFold DB [2]
  • ChEBI [2]
  • ChEMBL [2]
  • Pfam [2]
  • DrugBank [1]
  • SCOP2 [1]