Electron Microscopy Data Bank

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Current Database

Current status

Sample type

Organism

Homo sapiens [131]
Saccharomyces cerevisiae [34]
Human immunodeficiency virus 1 [24]
Mus musculus [18]
Oryctolagus cuniculus [17]
Influenza a virus [16]
Synthetic construct [16]
Severe acute respiratory syndrome coronavirus [15]
Azotobacter vinelandii [14]
Escherichia coli [13]
Saccharomyces cerevisiae [9]
Mycobacterium tuberculosis [9]
Danio rerio [7]
Macaca mulatta [7]
Middle east respiratory syndrome-related coronavirus [5]
Vibrio cholerae [5]
Sulfolobus islandicus [5]
Vicugna pacos [4]
Drosophila melanogaster [4]
Escherichia coli [4]
Primate t-lymphotropic virus 1 [3]
Lama glama [3]
Bos taurus [3]
Rattus rattus [2]
Human cytomegalovirus [2]
Simian immunodeficiency virus [2]
Bacillus thuringiensis [2]
Sporosarcina pasteurii [2]
Hiv-1 vector pnl4-3 [2]
Helicobacter pylori [2]
(no species) [2]
Streptomyces lasalocidi [2]
Plasmodium falciparum [2]
Yarrowia lipolytica [2]
African swine fever virus [1]
Dengue virus [1]
Vesicular stomatitis virus [1]
Indiana vesiculovirus [1]
Indiana vesiculovirus [1]
Lassa mammarenavirus [1]
Quasibacillus thermotolerans [1]
Human immunodeficiency virus [1]
Staphylococcus aureus [1]
Bombus ignitus [1]
Bacillus subtilis [1]
Clostridium acetobutylicum [1]
Human metapneumovirus [1]
Mycobacterium tuberculosis [1]
Pseudomonas phage 201phi2-1 [1]
Pseudomonas aeruginosa [1]
Chaetomium thermophilum [1]
Clostridium tetani [1]
Binjari virus [1]
Mycolicibacterium smegmatis [1]
Escherichia virus goslar [1]
(no species) [1]
Schizosaccharomyces pombe [1]
Severe acute respiratory syndrome coronavirus [1]
Bos indicus x bos taurus [1]
Chlamydomonas reinhardtii [1]
Haloarcula hispanica virus sh1 [1]
Influenza a virus [1]
Ligilactobacillus salivarius [1]
African horse sickness virus [1]
Arabidopsis thaliana [1]
Bacteriophage sp. [1]
Toxoplasma gondii [1]
Linum usitatissimum [1]
Rotavirus a [1]
Bacillus subtilis [1]
Candida albicans [1]
(no species) [1]
Aquifex aeolicus [1]
Vibrio alginolyticus [1]
Chaetomium thermophilum [1]
Xenopus laevis [1]
Gallus gallus [1]
Canis lupus [1]
Equus caballus [1]
Sus scrofa [1]
Salmonella enterica [1]
Camelus bactrianus [1]
Camelus dromedarius [1]
Ovis aries [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Li Y [61]
Cook BD [45]
Herzik MA [45]
Narehood SM [45]
Kwong PD [33]
Rahmani H [32]
Bachochin MJ [31]
Dukakis P [31]
Enos SE [31]
Grotjahn DA [31]
Ji D [31]
Kuschnerus IC [31]
Redford HT [31]
Redford TH [31]
Gorman J [30]
Bagde SR [29]
Fromme JC [29]
Chaker-margot M [28]
Klinge S [28]
Miller L [28]
Singh S [28]
Vanden Broeck A [28]
Zhang B [17]
Zhou T [16]
Herzik Jr Ma [15]
Akif Tezcan F [14]
Hite RK [14]
Mcguire KL [14]
Olia AS [14]
Tezcan FA [14]
Yang Y [14]
Diver MM [13]
Mascola JR [13]
Zhu Q [13]
Doria-rose NA [11]
Earl CP [11]
Guo Y [11]
Louder MK [11]
Rawi R [11]
Shapiro L [11]
Clark M [10]
Cowan SR [10]
Di Daniel E [10]
Fisher S [10]
Holvey RS [10]
Jackson SM [10]
Johnson CN [10]
Liu C [10]
Lloyd-evans E [10]
Mahajan P [10]
Morgillo CM [10]
Mortenson PN [10]
O Reilly M [10]
Reeks J [10]
Richardson CJ [10]
Schopf P [10]
Tams DM [10]
Waller-evans H [10]
Wang S [10]
Ward SE [10]
Whibley S [10]
Williams PA [10]
Allwein B [9]
Bahng S [9]
Batra S [9]
Bruning JG [9]
Bylund T [9]
Chuang GY [9]
Devbhandari S [9]
Hite R [9]
Kumar C [9]
Lee CM [9]
Liu T [9]
Marians KJ [9]
Mason RD [9]
Remus D [9]
Roederer M [9]
Shen CH [9]
Cao X [8]
Tsybovsky Y [8]
Baker D [7]
Blundell TL [7]
Braun N [7]
Cerutti G [7]
Chaplin AK [7]
Chirgadze DY [7]
Cong Q [7]
Cooper LR [7]
Costa TRD [7]
De Oliveira Tm [7]
Hardwick SW [7]
Hnizda A [7]
Jessen HJ [7]
Jork N [7]
Kefala Stavridi A [7]
Liang S [7]
Lin BC [7]
Lu F [7]
Lukoyanova N [7]
Mace K [7]

Author by ORCID

Narehood SM [45]
Cook BD [45]
Li Y [45]
Rahmani H [32]
Grotjahn DA [31]
Herzik MA [31]
Enos SE [31]
Bachochin MJ [31]
Kuschnerus IC [31]
Redford TH [31]
Dukakis P [31]
Ji D [31]
Bagde SR [28]
Fromme JC [28]
Herzik Jr Ma [15]
Akif Tezcan F [14]
Mcguire KL [14]
Diver MM [13]
Kwong PD [13]
Gorman J [12]
Remus D [9]
Allwein B [9]
Hite RK [9]
Bruning JG [9]
Batra S [9]
Lee CM [9]
Zhu Q [7]
Jessen HJ [7]
Almakki O [6]
Kikkawa M [5]
Inaba K [5]
Shapiro L [5]
Wu B [5]
Watanabe S [5]
Nomura N [5]
Seebacher J [5]
Bleichert F [5]
Iwata S [5]
Seeger MA [5]
Bunduc CM [4]
Striednig B [4]
Guo Y [4]
Marlovits TC [4]
Bitter W [4]
Galazzo L [4]
Lay K [4]
Lubbe L [4]
Zhong FL [4]
Wald J [4]
Januliene D [4]
Harris DR [4]
Zhou T [4]
Reversade B [4]
Borek D [4]
Meier G [4]
Parey K [4]
Hilbi H [4]
Shukla S [4]
Sewell BT [4]
Woodward JD [4]
De Vecchis D [4]
Schafer LV [4]
Houben ENG [4]
Kuprov I [4]
Fahrenkamp D [4]
Sturrock ED [4]
Bordignon E [4]
Guo Y [3]
Lewis E [3]
Gillespie RA [3]
Kanekiyo M [3]
Seaman MS [3]
Mason RD [3]
Li H [3]
Saunders KO [3]
Roederer M [3]
Singh A [3]
Shimberg GD [3]
Hinde E [3]
Andrabi R [3]
Smith SJ [3]
Pye VE [3]
Das AK [3]
Vanzo T [3]
Burke Jr Tr [3]
Zhang B [3]
Kulp DW [3]
Cherepanov P [3]
Rouiller I [3]
Rando JM [3]
Maertens GN [3]
Bylund T [3]
Shaw GM [3]
Andrews SF [3]
Habib R [3]
Creanga A [3]
Sheng Z [3]
Hogarty MP [3]
Baral J [3]
Lei QP [3]

Journal

NAT COMMUN [70]
SCIENCE [43]
BIORXIV [42]
SCI ADV [36]
NATURE [21]
NAT STRUCT MOL BIOL [16]
STRUCTURE [14]
PNAS [13]
CELL REP [11]
EMBO J [10]
TO BE PUBLISHED [10]
MOL CELL [9]
ACS INFECT DIS. [5]
NUCLEIC ACIDS RES [5]
CELL [4]
PROTEIN SCI [4]
CELL HOST MICROBE [3]
ELIFE [3]
J EXP MED [3]
NAT CHEM BIOL [3]
SCI TRANSL MED [3]
CURR TOP DEV BIOL [2]
INT J BIOL MACROMOL [2]
INT J MOL SCI [2]
MBIO [2]
NAT MED [2]
NAT MICROBIOL [2]
ACTA CRYSTALLOGR D STRUCT BIOL [1]
AM J KIDNEY DIS [1]
ANNU REV BIOPHYS [1]
BIOCHEM J [1]
BIOL CELLULAIRE [1]
COMMUN BIOL [1]
EMERG MICROBES INFECT [1]
FRONT MOL BIOSCI [1]
IUCRJ [1]
J STRUCT BIOL [1]
KIDNEY INT [1]
MABS [1]
MOL BIOL CELL [1]
NAT CELL BIOL [1]
NAT METHODS [1]
NEW PHYTOL. [1]
PROC SOC EXP BIOL MED [1]

Software

Microscope

Electron Source

Film or detector model

External links

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Showing 1 - 10 of 329. Page 1 of 33

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EMD-72511

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CryoEM structure of SufR from Mycobacterium tuberculosis bound to the promoter of the suf operon

CryoEM

Release date: Sept. 16, 2026
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9y5k

Q-score: 0.449
Similar entry percentile: 55%

Lu ZF, Zhang LM

To Be Published

EMD-77368

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HIV-1 reverse transcriptase in complex with DNAddG Aptamer and unincorporated ISL-triphosphate

CryoEM

Release date: Sept. 2, 2026
Resolution: 1.85 Å
EM Method: Single-particle
Fitted PDBs: 36bt

Q-score: 0.675
Similar entry percentile: 54%

Hecksel CW, Walker SN, Raheem I, Asante-Appiah E, Calero G, Diamond TL, Gabelli SB, Gomez-Llorente Y, Hayes RP, Tummala S, Vergara S, Klein DJ

Acs Infect Dis. (2026) 12 pp. 3179-3190 [ DOI: doi:10.1021/acsinfecdis.6c00431 Pubmed: 42725963 ]

EMD-77389

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HIV-1 reverse transcriptase in complex with DNA Aptamer and Incorporated dATP

CryoEM

Release date: Sept. 2, 2026
Resolution: 1.9 Å
EM Method: Single-particle
Fitted PDBs: 36cp

Q-score: 0.635
Similar entry percentile: 40%

Hecksel CW, Walker SN, Raheem I, Asante-Appiah E, Calero G, Diamond TL, Gabelli SB, Gomez-Llorente Y, Hayes RP, Tummala S, Vergara S, Klein DJ

Acs Infect Dis. (2026) 12 pp. 3179-3190 [ DOI: doi:10.1021/acsinfecdis.6c00431 Pubmed: 42725963 ]

EMD-77393

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HIV-1 reverse transcriptase F227C in complex with DNAddG Aptamer and unincorporated ISL-triphosphate

CryoEM

Release date: Sept. 2, 2026
Resolution: 1.9 Å
EM Method: Single-particle
Fitted PDBs: 36cw

Q-score: 0.644
Similar entry percentile: 45%

Hecksel CW, Walker SN, Raheem I, Asante-Appiah E, Calero G, Diamond TL, Gabelli SB, Gomez-Llorente Y, Hayes RP, Tummala S, Vergara S, Klein DJ

Acs Infect Dis. (2026) 12 pp. 3179-3190 [ DOI: doi:10.1021/acsinfecdis.6c00431 Pubmed: 42725963 ]

EMD-77401

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HIV-1 reverse transcriptase F227C in complex with DNA Aptamer and Incorporated dATP

CryoEM

Release date: Sept. 2, 2026
Resolution: 2.1 Å
EM Method: Single-particle
Fitted PDBs: 36dk

Q-score: 0.657
Similar entry percentile: 72%

Hecksel CW, Walker SN, Raheem I, Asante-Appiah E, Calero G, Diamond TL, Gabelli SB, Gomez-Llorente Y, Hayes RP, Tummala S, Vergara S, Klein DJ

Acs Infect Dis. (2026) 12 pp. 3179-3190 [ DOI: doi:10.1021/acsinfecdis.6c00431 Pubmed: 42725963 ]

EMD-77403

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HIV-1 reverse transcriptase F227C in complex with DNAddG Aptamer

CryoEM

Release date: Sept. 2, 2026
Resolution: 2.2 Å
EM Method: Single-particle
Fitted PDBs: 36dn

Q-score: 0.602
Similar entry percentile: 54%

Hecksel CW, Walker SN, Raheem I, Asante-Appiah E, Calero G, Diamond TL, Gabelli SB, Gomez-Llorente Y, Hayes RP, Tummala S, Vergara S, Klein DJ

Acs Infect Dis. (2026) 12 pp. 3179-3190 [ DOI: doi:10.1021/acsinfecdis.6c00431 Pubmed: 42725963 ]

EMD-72185

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Cryo-EM structure of designed Orb2 amyloid LVLVF, polymorph 3

CryoEM

Release date: Aug. 19, 2026
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 9q37

Q-score: 0.435
Similar entry percentile: 45%

Singh R, Kaili L, Si K, Joachimiak L

To Be Published

EMD-72686

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Cryo-EM structure of Broadly neutralizing antibody VRC48.02 in complex with HIV-1 Env BG505 DS-SOSIP trimer

CryoEM

Release date: Aug. 5, 2026
Resolution: 3.43 Å
EM Method: Single-particle
Fitted PDBs: 9y90

Q-score: 0.479
Similar entry percentile: 67%

Gorman J, Kwong PD

To Be Published

EMD-72857

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Cryo-EM structure of double-bound FDG antibody VRC49.01 in complex with HIV-1 Env BG505 DS-SOSIP trimer

CryoEM

Release date: Aug. 5, 2026
Resolution: 3.64 Å
EM Method: Single-particle
Fitted PDBs: 9yeo

Q-score: 0.404
Similar entry percentile: 42%

Gorman J, Kwong PD

To Be Published

EMD-72923

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Cryo-EM structure of L9-L4 in complex with Plasmodium falciparum circumsporozoite protein PfCSP

CryoEM

Release date: Aug. 5, 2026
Resolution: 4.02 Å
EM Method: Single-particle
Fitted PDBs: 9ygg

Q-score: 0.327
Similar entry percentile: 35%

Tripathi P, Kwong PD

To Be Published

Sort by: Download

Showing 1 - 10 of 329. Page 1 of 33

Display:

Statistics

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [131]
Saccharomyces cerevisiae [34]
Human immunodeficiency virus 1 [24]
Mus musculus [18]
Oryctolagus cuniculus [17]
Influenza a virus [16]
Synthetic construct [16]
Severe acute respiratory syndrome coronavirus [15]
Azotobacter vinelandii [14]
Escherichia coli [13]
Saccharomyces cerevisiae [9]
Mycobacterium tuberculosis [9]
Danio rerio [7]
Macaca mulatta [7]
Middle east respiratory syndrome-related coronavirus [5]
Vibrio cholerae [5]
Sulfolobus islandicus [5]
Vicugna pacos [4]
Drosophila melanogaster [4]
Escherichia coli [4]
Primate t-lymphotropic virus 1 [3]
Lama glama [3]
Bos taurus [3]
Rattus rattus [2]
Human cytomegalovirus [2]
Simian immunodeficiency virus [2]
Bacillus thuringiensis [2]
Sporosarcina pasteurii [2]
Hiv-1 vector pnl4-3 [2]
Helicobacter pylori [2]
(no species) [2]
Streptomyces lasalocidi [2]
Plasmodium falciparum [2]
Yarrowia lipolytica [2]
African swine fever virus [1]
Dengue virus [1]
Vesicular stomatitis virus [1]
Indiana vesiculovirus [1]
Indiana vesiculovirus [1]
Lassa mammarenavirus [1]
Quasibacillus thermotolerans [1]
Human immunodeficiency virus [1]
Staphylococcus aureus [1]
Bombus ignitus [1]
Bacillus subtilis [1]
Clostridium acetobutylicum [1]
Human metapneumovirus [1]
Mycobacterium tuberculosis [1]
Pseudomonas phage 201phi2-1 [1]
Pseudomonas aeruginosa [1]
Chaetomium thermophilum [1]
Clostridium tetani [1]
Binjari virus [1]
Mycolicibacterium smegmatis [1]
Escherichia virus goslar [1]
(no species) [1]
Schizosaccharomyces pombe [1]
Severe acute respiratory syndrome coronavirus [1]
Bos indicus x bos taurus [1]
Chlamydomonas reinhardtii [1]
Haloarcula hispanica virus sh1 [1]
Influenza a virus [1]
Ligilactobacillus salivarius [1]
African horse sickness virus [1]
Arabidopsis thaliana [1]
Bacteriophage sp. [1]
Toxoplasma gondii [1]
Linum usitatissimum [1]
Rotavirus a [1]
Bacillus subtilis [1]
Candida albicans [1]
(no species) [1]
Aquifex aeolicus [1]
Vibrio alginolyticus [1]
Chaetomium thermophilum [1]
Xenopus laevis [1]
Gallus gallus [1]
Canis lupus [1]
Equus caballus [1]
Sus scrofa [1]
Salmonella enterica [1]
Camelus bactrianus [1]
Camelus dromedarius [1]
Ovis aries [1]

EM Method

Resolution

Model molecular weight

Release Date

Author by name

Li Y [61]
Cook BD [45]
Herzik MA [45]
Narehood SM [45]
Kwong PD [33]
Rahmani H [32]
Bachochin MJ [31]
Dukakis P [31]
Enos SE [31]
Grotjahn DA [31]
Ji D [31]
Kuschnerus IC [31]
Redford HT [31]
Redford TH [31]
Gorman J [30]
Bagde SR [29]
Fromme JC [29]
Chaker-margot M [28]
Klinge S [28]
Miller L [28]
Singh S [28]
Vanden Broeck A [28]
Zhang B [17]
Zhou T [16]
Herzik Jr Ma [15]
Akif Tezcan F [14]
Hite RK [14]
Mcguire KL [14]
Olia AS [14]
Tezcan FA [14]
Yang Y [14]
Diver MM [13]
Mascola JR [13]
Zhu Q [13]
Doria-rose NA [11]
Earl CP [11]
Guo Y [11]
Louder MK [11]
Rawi R [11]
Shapiro L [11]
Clark M [10]
Cowan SR [10]
Di Daniel E [10]
Fisher S [10]
Holvey RS [10]
Jackson SM [10]
Johnson CN [10]
Liu C [10]
Lloyd-evans E [10]
Mahajan P [10]
Morgillo CM [10]
Mortenson PN [10]
O Reilly M [10]
Reeks J [10]
Richardson CJ [10]
Schopf P [10]
Tams DM [10]
Waller-evans H [10]
Wang S [10]
Ward SE [10]
Whibley S [10]
Williams PA [10]
Allwein B [9]
Bahng S [9]
Batra S [9]
Bruning JG [9]
Bylund T [9]
Chuang GY [9]
Devbhandari S [9]
Hite R [9]
Kumar C [9]
Lee CM [9]
Liu T [9]
Marians KJ [9]
Mason RD [9]
Remus D [9]
Roederer M [9]
Shen CH [9]
Cao X [8]
Tsybovsky Y [8]
Baker D [7]
Blundell TL [7]
Braun N [7]
Cerutti G [7]
Chaplin AK [7]
Chirgadze DY [7]
Cong Q [7]
Cooper LR [7]
Costa TRD [7]
De Oliveira Tm [7]
Hardwick SW [7]
Hnizda A [7]
Jessen HJ [7]
Jork N [7]
Kefala Stavridi A [7]
Liang S [7]
Lin BC [7]
Lu F [7]
Lukoyanova N [7]
Mace K [7]

Author by ORCID

Narehood SM [45]
Cook BD [45]
Li Y [45]
Rahmani H [32]
Grotjahn DA [31]
Herzik MA [31]
Enos SE [31]
Bachochin MJ [31]
Kuschnerus IC [31]
Redford TH [31]
Dukakis P [31]
Ji D [31]
Bagde SR [28]
Fromme JC [28]
Herzik Jr Ma [15]
Akif Tezcan F [14]
Mcguire KL [14]
Diver MM [13]
Kwong PD [13]
Gorman J [12]
Remus D [9]
Allwein B [9]
Hite RK [9]
Bruning JG [9]
Batra S [9]
Lee CM [9]
Zhu Q [7]
Jessen HJ [7]
Almakki O [6]
Kikkawa M [5]
Inaba K [5]
Shapiro L [5]
Wu B [5]
Watanabe S [5]
Nomura N [5]
Seebacher J [5]
Bleichert F [5]
Iwata S [5]
Seeger MA [5]
Bunduc CM [4]
Striednig B [4]
Guo Y [4]
Marlovits TC [4]
Bitter W [4]
Galazzo L [4]
Lay K [4]
Lubbe L [4]
Zhong FL [4]
Wald J [4]
Januliene D [4]
Harris DR [4]
Zhou T [4]
Reversade B [4]
Borek D [4]
Meier G [4]
Parey K [4]
Hilbi H [4]
Shukla S [4]
Sewell BT [4]
Woodward JD [4]
De Vecchis D [4]
Schafer LV [4]
Houben ENG [4]
Kuprov I [4]
Fahrenkamp D [4]
Sturrock ED [4]
Bordignon E [4]
Guo Y [3]
Lewis E [3]
Gillespie RA [3]
Kanekiyo M [3]
Seaman MS [3]
Mason RD [3]
Li H [3]
Saunders KO [3]
Roederer M [3]
Singh A [3]
Shimberg GD [3]
Hinde E [3]
Andrabi R [3]
Smith SJ [3]
Pye VE [3]
Das AK [3]
Vanzo T [3]
Burke Jr Tr [3]
Zhang B [3]
Kulp DW [3]
Cherepanov P [3]
Rouiller I [3]
Rando JM [3]
Maertens GN [3]
Bylund T [3]
Shaw GM [3]
Andrews SF [3]
Habib R [3]
Creanga A [3]
Sheng Z [3]
Hogarty MP [3]
Baral J [3]
Lei QP [3]

Journal

NAT COMMUN [70]
SCIENCE [43]
BIORXIV [42]
SCI ADV [36]
NATURE [21]
NAT STRUCT MOL BIOL [16]
STRUCTURE [14]
PNAS [13]
CELL REP [11]
EMBO J [10]
TO BE PUBLISHED [10]
MOL CELL [9]
ACS INFECT DIS. [5]
NUCLEIC ACIDS RES [5]
CELL [4]
PROTEIN SCI [4]
CELL HOST MICROBE [3]
ELIFE [3]
J EXP MED [3]
NAT CHEM BIOL [3]
SCI TRANSL MED [3]
CURR TOP DEV BIOL [2]
INT J BIOL MACROMOL [2]
INT J MOL SCI [2]
MBIO [2]
NAT MED [2]
NAT MICROBIOL [2]
ACTA CRYSTALLOGR D STRUCT BIOL [1]
AM J KIDNEY DIS [1]
ANNU REV BIOPHYS [1]
BIOCHEM J [1]
BIOL CELLULAIRE [1]
COMMUN BIOL [1]
EMERG MICROBES INFECT [1]
FRONT MOL BIOSCI [1]
IUCRJ [1]
J STRUCT BIOL [1]
KIDNEY INT [1]
MABS [1]
MOL BIOL CELL [1]
NAT CELL BIOL [1]
NAT METHODS [1]
NEW PHYTOL. [1]
PROC SOC EXP BIOL MED [1]

Software

Microscope

Electron Source

Film or detector model

External links