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Filter By

Current Database

  • EMDB [56]

Current status

  • REL [56]

Sample type

  • Protein [53]
  • Complex [50]
  • Ligand [39]
  • DNA [19]
  • RNA [10]
  • Virus [4]
  • Cell [1]
  • Cellular component [1]

Organism

  • Homo sapiens [15]
  • Saccharomyces cerevisiae [10]
  • Mus musculus [4]
  • Escherichia coli [4]
  • Mesocricetus auratus [2]
  • Bacillus subtilis [2]
  • Adeno-associated virus [2]
  • Leishmania major [2]
  • Escherichia coli [2]
  • Saccharomyces cerevisiae [2]
  • Drosophila melanogaster [2]
  • Adeno-associated dependoparvovirus b [2]
  • Bos taurus [2]
  • Human herpesvirus 1 [1]
  • Adeno-associated dependoparvovirus a [1]
  • Vesicular stomatitis virus [1]
  • Indiana vesiculovirus [1]
  • Synechocystis sp. pcc 6803 [1]
  • Human immunodeficiency virus 1 [1]
  • Spraguea lophii [1]
  • Adeno-associated dependoparvovirus a [1]
  • Prevotella copri [1]
  • Thermothielavioides terrestris [1]
  • Schistosoma mansoni [1]
  • Thermococcus kodakarensis [1]

EM Method

  • Single-particle [53]
  • Helical reconstruction [2]
  • Electron Crystallography [1]

Resolution

  • < 2Å [3]
  • ≥ 2Å and < 3Å [26]
  • ≥ 3Å and < 4Å [21]
  • ≥ 4Å and < 5Å [4]
  • ≥ 6Å and < 8Å [2]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [16]
  • 250-500 kDa [18]
  • 500-1000 kDa [8]
  • 2-5 MDa [9]
  • 5-10 MDa [1]

Release Date

  • 2026 [2]
  • 2025 [7]
  • 2024 [5]
  • 2023 [5]
  • 2022 [13]
  • 2021 [3]
  • 2020 [12]
  • 2019 [2]
  • 2018 [4]
  • 2017 [3]

Author by name

  • Hite RK [11]
  • Castaneda JC [10]
  • Devbhandari S [10]
  • Kumar C [10]
  • Remus D [10]
  • Schrecker M [10]
  • Dhar A [5]
  • Pavletich NP [5]
  • Naschberger A [4]
  • Nobe Y [4]
  • Taoka M [4]
  • Aibara S [3]
  • Amunts A [3]
  • Andrell J [3]
  • Barrientos A [3]
  • Chapman MS [3]
  • Chen J [3]
  • Del Olio S [3]
  • Flygaard RK [3]
  • Hassan A [3]
  • Itoh Y [3]
  • Izumikawa K [3]
  • Peralta C [3]
  • Singh V [3]
  • Wang R [3]
  • Wang S [3]
  • Whitford PC [3]
  • Anand G [2]
  • Armache J-P [2]
  • Babitzke P [2]
  • Bashan A [2]
  • Bettler E [2]
  • Boo ZZ [2]
  • Camara-wilpert S [2]
  • Carabias A [2]
  • Carabias Del Rey A [2]
  • Chaptal V [2]
  • Chen L [2]
  • Clarke OB [2]
  • Ding D [2]
  • Dollinger R [2]
  • Falson P [2]
  • Fuglsang A [2]
  • Gilmour DS [2]
  • Gobet A [2]
  • Gong Q [2]
  • Grigorieff N [2]
  • Hagen WJH [2]
  • Hendriks IA [2]
  • Jault JM [2]
  • Johnson ZL [2]
  • Kang Y [2]
  • Khatter H [2]
  • Large EE [2]
  • Lopez-mendez B [2]
  • Luk SH [2]
  • Magnard S [2]
  • Martin J [2]
  • Mestre MR [2]
  • Moissonnier L [2]
  • Montoya G [2]
  • Muller CW [2]
  • Murakami K [2]
  • Nielsen ML [2]
  • Orelle C [2]
  • Pape T [2]
  • Pinilla-redondo R [2]
  • Rajan KS [2]
  • Reversade B [2]
  • Schoehn G [2]
  • Schultz J [2]
  • Silveria M [2]
  • Silveria MA [2]
  • Teo DET [2]
  • Terreux R [2]
  • Venette-smith NL [2]
  • Venkatakrishnan V [2]
  • Vishwakarma RK [2]
  • Vorlaender MK [2]
  • Vorlander MK [2]
  • Wang M [2]
  • Wetzel R [2]
  • White TA [2]
  • Wu B [2]
  • Wu JX [2]
  • Yang H [2]
  • Yonath A [2]
  • Zane GM [2]
  • Zarkadas E [2]
  • Zhang J [2]
  • Zhang Y [2]
  • Zhao R [2]
  • Zhong FL [2]
  • Zhou C [2]
  • Abernathy ME [1]
  • Aboagye SY [1]
  • Aharon-hefetz N [1]
  • Al-amoudi A [1]
  • Alam A [1]
  • Angelucci F [1]

Author by ORCID

  • Hite RK [11]
  • Schrecker M [10]
  • Remus D [10]
  • Taoka M [4]
  • Nobe Y [3]
  • Whitford PC [3]
  • Itoh Y [3]
  • Chapman MS [3]
  • Barrientos A [3]
  • Amunts A [3]
  • Hassan A [3]
  • Aibara S [3]
  • Andrell J [3]
  • Singh V [3]
  • Peralta C [3]
  • Vishwakarma RK [2]
  • Vorlander MK [2]
  • Hagen WJH [2]
  • White TA [2]
  • Kang Y [2]
  • Anand G [2]
  • Armache J-P [2]
  • Wu JX [2]
  • Venette-smith NL [2]
  • Zhao R [2]
  • Zhong FL [2]
  • Pape T [2]
  • Wu B [2]
  • Hendriks IA [2]
  • Schoehn G [2]
  • Grigorieff N [2]
  • Dollinger R [2]
  • Zane GM [2]
  • Reversade B [2]
  • Martin J [2]
  • Pavletich NP [2]
  • Venkatakrishnan V [2]
  • Chen L [2]
  • Montoya G [2]
  • Gobet A [2]
  • Zhou C [2]
  • Zarkadas E [2]
  • Falson P [2]
  • Wang M [2]
  • Jault JM [2]
  • Muller CW [2]
  • Murakami K [2]
  • Babitzke P [2]
  • Chaptal V [2]
  • Orelle C [2]
  • Gilmour DS [2]
  • Jin Y [1]
  • Yonekura K [1]
  • Miao J [1]
  • Sjoberg BM [1]
  • Han L [1]
  • Gadkari VV [1]
  • Goh WI [1]
  • Virshup DM [1]
  • Faraldo-gomez JD [1]
  • Angelucci F [1]
  • Aboagye SY [1]
  • Arkhipova V [1]
  • Tajkhorshid E [1]
  • Rodriguez JA [1]
  • Lay K [1]
  • Mietzsch M [1]
  • Lullo RP [1]
  • Alam A [1]
  • Cornely OA [1]
  • Logan DT [1]
  • Wu F [1]
  • Nygaard R [1]
  • Kosek D [1]
  • Le LTM [1]
  • Ding Z [1]
  • Dang PX [1]
  • Hiregange DG [1]
  • Oh S [1]
  • Kawakami K [1]
  • Harding LNM [1]
  • Mckenna R [1]
  • Takaba K [1]
  • Parisi G [1]
  • Al-amoudi A [1]
  • Gennis R [1]
  • Yin Z [1]
  • Ling WL [1]
  • Richardson BC [1]
  • Vehreschild JJ [1]
  • Liang B [1]
  • Bloyet LM [1]
  • Slotboom DJ [1]
  • Williams DL [1]
  • Effantin G [1]
  • Yu J [1]
  • Naschberger A [1]
  • Huang P [1]
  • Ekstrom S [1]
  • Bashan A [1]

Journal

  • ELIFE [12]
  • NAT COMMUN [10]
  • NATURE [7]
  • CELL [4]
  • CELL REP [4]
  • TO BE PUBLISHED [4]
  • BIORXIV [3]
  • PNAS [3]
  • VIRUSES [3]
  • MOL CELL [2]
  • COMMUN BIOL [1]
  • COMMUN CHEM [1]
  • EMBO J [1]
  • J BIOL CHEM [1]
  • NAT MICROBIOL [1]
  • NAT STRUCT MOL BIOL [1]
  • VIROLOGY [1]

Software

  • CRYOSPARC [21]
  • RELION [21]
  • FREALIGN [4]
  • CISTEM [1]

Microscope

  • FEI TITAN KRIOS [40]
  • TFS KRIOS [6]
  • TFS TALOS [3]
  • FEI TALOS ARCTICA [2]
  • FEI POLARA 300 [1]
  • FEI TECNAI ARCTICA [1]
  • FEI TECNAI F20 [1]
  • FEI TITAN [1]
  • JEOL CRYO ARM 300 [1]
  • TFS GLACIOS [1]

Electron Source

  • FIELD EMISSION GUN [56]

Film or detector model

  • GATAN K3 6K X 4K [21]
  • GATAN K2 SUMMIT 4K X 4K [20]
  • GATAN K2 QUANTUM 4K X 4K [4]
  • GATAN K3 BIOQUANTUM 6K X 4K [4]
  • FEI FALCON III 4K X 4K [3]
  • FEI FALCON IV 4K X 4K [3]
  • GATAN K3 BIOCONTINUUM 6K X 4K [1]
  • TVIPS TEMCAM-F416 4K X 4K [1]

External links

  • PDB [53]
  • UniProt [53]
  • InterPro [48]
  • PDBe-Kb [48]
  • Gene Ontology [47]
  • AlphaFold DB [45]
  • Pfam [42]
  • ChEBI [39]
  • DrugBank [39]
  • ChEMBL [36]
  • Complex Portal [19]
  • EMPIAR [13]
  • CATH [2]
  • SCOP2 [1]
Sort by: Download
Showing 1 - 10 of 56. Page 1 of 6
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EMD-66639
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3D View
Raw data
EMPIAR-13264 EMPIAR-13265 EMPIAR-13211
In situ structure of bacterial 50S ribosomes
Release date: Feb. 4, 2026
Resolution: 2.98 Å
EM Method: Single-particle

Al-Amoudi A, Baradaran R, Yuan X, Wu F, Naschberger A

Commun Biol (2025) [ Pubmed: 41476251 DOI: doi:10.1038/s42003-025-09441-6 ]

EMD-48632
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Mus musculus TASK-1 KCNK3 in MSP1E3D1 lipid nanodisc at pH 6.0 and 100 mM KCl
Release date: Jan. 28, 2026
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9muh
Q-score: 0.426

Docter TA, Brohawn SG

To Be Published

EMD-51374
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Full-lenght Nedd4-2 E3 ubiquitin ligase in presence of Ca2
Release date: June 4, 2025
Resolution: 4.11 Å
EM Method: Single-particle
Fitted PDBs: 9gim
Q-score: 0.388

Janosev M, Kosek D, Tekel A, Joshi R, Honzejkova K, Pohl P, Obsil T, Obsilova V

Nat Commun (2025) 16 pp. 4875-4875 [ Pubmed: 40419858 DOI: doi:10.1038/s41467-025-60207-4 ]

EMD-48625
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Structure of a native Drosophila melanogaster Nucleosome Elongation Complex Pol II EC-nucleosome . Overall structure
Release date: Feb. 19, 2025
Resolution: 7.8 Å
EM Method: Single-particle

Venette-Smith NL, Vishwakarma RK, Dollinger R, Schultz J, Venkatakrishnan V, Babitzke P, Anand G, Gilmour DS, Armache J-P, Murakami K

To Be Published

EMD-48626
Composite map
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Structure of a native Drosophila melanogaster Nucleosome Elongation Complex Pol II EC-nucleosome . Composite map
Release date: Feb. 19, 2025
Resolution: 7.8 Å
EM Method: Single-particle
Fitted PDBs: 9mu9
Q-score: 0.202

Venette-Smith NL, Vishwakarma RK, Dollinger R, Schultz J, Venkatakrishnan V, Babitzke P, Anand G, Gilmour DS, Armache J-P, Murakami K

To Be Published

EMD-18419
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CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : LM32Cs1C1 snoRNA overexpression
Release date: Feb. 12, 2025
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 8qhu
Q-score: 0.622

Rajan KS, Yonath A, Bashan A

To Be Published

EMD-45904
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SapNP Reconstituted Human ABCB1 bound to Taxol in presence of ATP
Release date: Jan. 22, 2025
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 9ctf
Q-score: 0.355

Kurre D, Dang PX, Le LTM, Gadkari VV, Alam A

EMBO J (2025) 44 pp. 991-1006 [ Pubmed: 39806099 DOI: doi:10.1038/s44318-025-00361-z ]

EMD-19131
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BmrA E504-25uMATPMg
Release date: Jan. 1, 2025
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8rga
Q-score: 0.32

Gobet A, Moissonnier L, Zarkadas E, Magnard S, Bettler E, Martin J, Terreux R, Schoehn G, Orelle C, Jault JM, Falson P, Chaptal V

Nat Commun (2025) 16 pp. 1745-1745 [ DOI: doi:10.1038/s41467-025-56849-z Pubmed: 39966360 ]

EMD-19185
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BmrA E504-100uMATPMg-IF
Release date: Jan. 1, 2025
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 8ria
Q-score: 0.267

Gobet A, Moissonnier L, Zarkadas E, Magnard S, Bettler E, Martin J, Terreux R, Schoehn G, Orelle C, Jault JM, Falson P, Chaptal V

Nat Commun (2025) 16 pp. 1745-1745 [ DOI: doi:10.1038/s41467-025-56849-z Pubmed: 39966360 ]

EMD-41460
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Structure of a mutated photosystem II complex reveals perturbation of the oxygen-evolving complex
Release date: June 19, 2024
Resolution: 2.14 Å
EM Method: Single-particle
Fitted PDBs: 8tow
Q-score: 0.686

Flesher DA, Liu J, Wang J, Gisriel CJ, Yang KR, Batista VS, Debus RJ, Brudvig GW

J Biol Chem (2024) 300 pp. 107475-107475 [ Pubmed: 38879008 DOI: doi:10.1016/j.jbc.2024.107475 ]

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Showing 1 - 10 of 56. Page 1 of 6
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Filter By

Current Database

  • EMDB [56]

Current status

  • REL [56]

Sample type

  • Protein [53]
  • Complex [50]
  • Ligand [39]
  • DNA [19]
  • RNA [10]
  • Virus [4]
  • Cell [1]
  • Cellular component [1]

Organism

  • Homo sapiens [15]
  • Saccharomyces cerevisiae [10]
  • Mus musculus [4]
  • Escherichia coli [4]
  • Mesocricetus auratus [2]
  • Bacillus subtilis [2]
  • Adeno-associated virus [2]
  • Leishmania major [2]
  • Escherichia coli [2]
  • Saccharomyces cerevisiae [2]
  • Drosophila melanogaster [2]
  • Adeno-associated dependoparvovirus b [2]
  • Bos taurus [2]
  • Human herpesvirus 1 [1]
  • Adeno-associated dependoparvovirus a [1]
  • Vesicular stomatitis virus [1]
  • Indiana vesiculovirus [1]
  • Synechocystis sp. pcc 6803 [1]
  • Human immunodeficiency virus 1 [1]
  • Spraguea lophii [1]
  • Adeno-associated dependoparvovirus a [1]
  • Prevotella copri [1]
  • Thermothielavioides terrestris [1]
  • Schistosoma mansoni [1]
  • Thermococcus kodakarensis [1]

EM Method

  • Single-particle [53]
  • Helical reconstruction [2]
  • Electron Crystallography [1]

Resolution

  • < 2Å [3]
  • ≥ 2Å and < 3Å [26]
  • ≥ 3Å and < 4Å [21]
  • ≥ 4Å and < 5Å [4]
  • ≥ 6Å and < 8Å [2]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [16]
  • 250-500 kDa [18]
  • 500-1000 kDa [8]
  • 2-5 MDa [9]
  • 5-10 MDa [1]

Release Date

  • 2026 [2]
  • 2025 [7]
  • 2024 [5]
  • 2023 [5]
  • 2022 [13]
  • 2021 [3]
  • 2020 [12]
  • 2019 [2]
  • 2018 [4]
  • 2017 [3]

Author by name

  • Hite RK [11]
  • Castaneda JC [10]
  • Devbhandari S [10]
  • Kumar C [10]
  • Remus D [10]
  • Schrecker M [10]
  • Dhar A [5]
  • Pavletich NP [5]
  • Naschberger A [4]
  • Nobe Y [4]
  • Taoka M [4]
  • Aibara S [3]
  • Amunts A [3]
  • Andrell J [3]
  • Barrientos A [3]
  • Chapman MS [3]
  • Chen J [3]
  • Del Olio S [3]
  • Flygaard RK [3]
  • Hassan A [3]
  • Itoh Y [3]
  • Izumikawa K [3]
  • Peralta C [3]
  • Singh V [3]
  • Wang R [3]
  • Wang S [3]
  • Whitford PC [3]
  • Anand G [2]
  • Armache J-P [2]
  • Babitzke P [2]
  • Bashan A [2]
  • Bettler E [2]
  • Boo ZZ [2]
  • Camara-wilpert S [2]
  • Carabias A [2]
  • Carabias Del Rey A [2]
  • Chaptal V [2]
  • Chen L [2]
  • Clarke OB [2]
  • Ding D [2]
  • Dollinger R [2]
  • Falson P [2]
  • Fuglsang A [2]
  • Gilmour DS [2]
  • Gobet A [2]
  • Gong Q [2]
  • Grigorieff N [2]
  • Hagen WJH [2]
  • Hendriks IA [2]
  • Jault JM [2]
  • Johnson ZL [2]
  • Kang Y [2]
  • Khatter H [2]
  • Large EE [2]
  • Lopez-mendez B [2]
  • Luk SH [2]
  • Magnard S [2]
  • Martin J [2]
  • Mestre MR [2]
  • Moissonnier L [2]
  • Montoya G [2]
  • Muller CW [2]
  • Murakami K [2]
  • Nielsen ML [2]
  • Orelle C [2]
  • Pape T [2]
  • Pinilla-redondo R [2]
  • Rajan KS [2]
  • Reversade B [2]
  • Schoehn G [2]
  • Schultz J [2]
  • Silveria M [2]
  • Silveria MA [2]
  • Teo DET [2]
  • Terreux R [2]
  • Venette-smith NL [2]
  • Venkatakrishnan V [2]
  • Vishwakarma RK [2]
  • Vorlaender MK [2]
  • Vorlander MK [2]
  • Wang M [2]
  • Wetzel R [2]
  • White TA [2]
  • Wu B [2]
  • Wu JX [2]
  • Yang H [2]
  • Yonath A [2]
  • Zane GM [2]
  • Zarkadas E [2]
  • Zhang J [2]
  • Zhang Y [2]
  • Zhao R [2]
  • Zhong FL [2]
  • Zhou C [2]
  • Abernathy ME [1]
  • Aboagye SY [1]
  • Aharon-hefetz N [1]
  • Al-amoudi A [1]
  • Alam A [1]
  • Angelucci F [1]

Author by ORCID

  • Hite RK [11]
  • Schrecker M [10]
  • Remus D [10]
  • Taoka M [4]
  • Nobe Y [3]
  • Whitford PC [3]
  • Itoh Y [3]
  • Chapman MS [3]
  • Barrientos A [3]
  • Amunts A [3]
  • Hassan A [3]
  • Aibara S [3]
  • Andrell J [3]
  • Singh V [3]
  • Peralta C [3]
  • Vishwakarma RK [2]
  • Vorlander MK [2]
  • Hagen WJH [2]
  • White TA [2]
  • Kang Y [2]
  • Anand G [2]
  • Armache J-P [2]
  • Wu JX [2]
  • Venette-smith NL [2]
  • Zhao R [2]
  • Zhong FL [2]
  • Pape T [2]
  • Wu B [2]
  • Hendriks IA [2]
  • Schoehn G [2]
  • Grigorieff N [2]
  • Dollinger R [2]
  • Zane GM [2]
  • Reversade B [2]
  • Martin J [2]
  • Pavletich NP [2]
  • Venkatakrishnan V [2]
  • Chen L [2]
  • Montoya G [2]
  • Gobet A [2]
  • Zhou C [2]
  • Zarkadas E [2]
  • Falson P [2]
  • Wang M [2]
  • Jault JM [2]
  • Muller CW [2]
  • Murakami K [2]
  • Babitzke P [2]
  • Chaptal V [2]
  • Orelle C [2]
  • Gilmour DS [2]
  • Jin Y [1]
  • Yonekura K [1]
  • Miao J [1]
  • Sjoberg BM [1]
  • Han L [1]
  • Gadkari VV [1]
  • Goh WI [1]
  • Virshup DM [1]
  • Faraldo-gomez JD [1]
  • Angelucci F [1]
  • Aboagye SY [1]
  • Arkhipova V [1]
  • Tajkhorshid E [1]
  • Rodriguez JA [1]
  • Lay K [1]
  • Mietzsch M [1]
  • Lullo RP [1]
  • Alam A [1]
  • Cornely OA [1]
  • Logan DT [1]
  • Wu F [1]
  • Nygaard R [1]
  • Kosek D [1]
  • Le LTM [1]
  • Ding Z [1]
  • Dang PX [1]
  • Hiregange DG [1]
  • Oh S [1]
  • Kawakami K [1]
  • Harding LNM [1]
  • Mckenna R [1]
  • Takaba K [1]
  • Parisi G [1]
  • Al-amoudi A [1]
  • Gennis R [1]
  • Yin Z [1]
  • Ling WL [1]
  • Richardson BC [1]
  • Vehreschild JJ [1]
  • Liang B [1]
  • Bloyet LM [1]
  • Slotboom DJ [1]
  • Williams DL [1]
  • Effantin G [1]
  • Yu J [1]
  • Naschberger A [1]
  • Huang P [1]
  • Ekstrom S [1]
  • Bashan A [1]

Journal

  • ELIFE [12]
  • NAT COMMUN [10]
  • NATURE [7]
  • CELL [4]
  • CELL REP [4]
  • TO BE PUBLISHED [4]
  • BIORXIV [3]
  • PNAS [3]
  • VIRUSES [3]
  • MOL CELL [2]
  • COMMUN BIOL [1]
  • COMMUN CHEM [1]
  • EMBO J [1]
  • J BIOL CHEM [1]
  • NAT MICROBIOL [1]
  • NAT STRUCT MOL BIOL [1]
  • VIROLOGY [1]

Software

  • CRYOSPARC [21]
  • RELION [21]
  • FREALIGN [4]
  • CISTEM [1]

Microscope

  • FEI TITAN KRIOS [40]
  • TFS KRIOS [6]
  • TFS TALOS [3]
  • FEI TALOS ARCTICA [2]
  • FEI POLARA 300 [1]
  • FEI TECNAI ARCTICA [1]
  • FEI TECNAI F20 [1]
  • FEI TITAN [1]
  • JEOL CRYO ARM 300 [1]
  • TFS GLACIOS [1]

Electron Source

  • FIELD EMISSION GUN [56]

Film or detector model

  • GATAN K3 6K X 4K [21]
  • GATAN K2 SUMMIT 4K X 4K [20]
  • GATAN K2 QUANTUM 4K X 4K [4]
  • GATAN K3 BIOQUANTUM 6K X 4K [4]
  • FEI FALCON III 4K X 4K [3]
  • FEI FALCON IV 4K X 4K [3]
  • GATAN K3 BIOCONTINUUM 6K X 4K [1]
  • TVIPS TEMCAM-F416 4K X 4K [1]

External links

  • PDB [53]
  • UniProt [53]
  • InterPro [48]
  • PDBe-Kb [48]
  • Gene Ontology [47]
  • AlphaFold DB [45]
  • Pfam [42]
  • ChEBI [39]
  • DrugBank [39]
  • ChEMBL [36]
  • Complex Portal [19]
  • EMPIAR [13]
  • CATH [2]
  • SCOP2 [1]