Electron Microscopy Data Bank

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Current Database

Current status

Sample type

Organism

Homo sapiens [116]
Escherichia coli [45]
Mus musculus [31]
Synthetic construct [27]
Saccharomyces cerevisiae [20]
Severe acute respiratory syndrome coronavirus [15]
Escherichia coli [14]
Danio rerio [12]
Sus scrofa [9]
Rattus norvegicus [8]
Pseudomonas aeruginosa [8]
Latrodectus tredecimguttatus [8]
Xenopus laevis [7]
Lama glama [6]
Human immunodeficiency virus 1 [5]
Varicellovirus suidalpha1 [5]
Saccharomyces cerevisiae [5]
Aquifex aeolicus [5]
Aquifex aeolicus [4]
Neospora caninum [4]
Chlamydomonas reinhardtii [4]
Plasmodium falciparum [4]
Human cytomegalovirus [3]
Severe acute respiratory syndrome coronavirus [3]
Plasmodium falciparum [3]
Allium cepa [3]
Gallus gallus [3]
Synechocystis sp. pcc 6803 [2]
Mumps orthorubulavirus [2]
Hiv-1 vector pnl4-3 [2]
Mycobacterium tuberculosis [2]
Staphylococcus aureus [2]
Pseudomonas protegens [2]
Bacillus sp. (strain ps3) [2]
Mycolicibacterium smegmatis [2]
Arabidopsis thaliana [2]
Candidatus amoebophilus asiaticus [2]
Saccharomyces cerevisiae [2]
Tetrahymena thermophila [2]
Vibrio cholerae [2]
Adeno-associated dependoparvovirus b [2]
Meleagris gallopavo [2]
Sus scrofa [2]
Bos taurus [2]
Oryctolagus cuniculus [2]
Cricetulus griseus [1]
Mesocricetus auratus [1]
(no species) [1]
Human cytomegalovirus [1]
Salmonella virus spn3us [1]
Venezuelan equine encephalitis virus [1]
Hepacivirus c [1]
Influenza a virus [1]
Pseudomonas aeruginosa [1]
Nostoc sp. [1]
Cowpea chlorotic mottle virus [1]
Staphylococcus aureus [1]
Lachnospiraceae bacterium ma2020 [1]
Acanthamoeba polyphaga mimivirus [1]
Caulobacter vibrioides [1]
Candidatus heimdallarchaeota archaeon [1]
Staphylococcaceae bacterium [1]
Chaetomium thermophilum [1]
Metamycoplasma arthritidis [1]
(no species) [1]
Methanosarcina mazei [1]
(no species) [1]
Burkholderia thailandensis [1]
Adeno-associated virus [1]
Cyanidium caldarium [1]
Pseudomonas phage phikz [1]
Limonium bicolor [1]
Physcomitrium patens [1]
(no species) [1]
Thalassiosira pseudonana [1]
Dictyostelium discoideum [1]
Toxoplasma gondii [1]
Solanum lycopersicum [1]
Alphainfluenzavirus influenzae [1]
Leptospira biflexa [1]
Phytophthora infestans [1]
Schizosaccharomyces pombe [1]
Vaccinia virus [1]
Plasmodium falciparum [1]
Klebsiella pneumoniae [1]
Toxoplasma gondii [1]
Ostreococcus tauri [1]
Drosophila melanogaster [1]
Apis mellifera [1]
Chaetomium thermophilum [1]
Strongylocentrotus purpuratus [1]
Phage #d [1]
Mycobacterium tuberculosis [1]
Shewanella sp. (strain ana-3) [1]
(no species) [1]
Canis lupus [1]

EM Method

Resolution

Release Date

Author by name

Liu J [20]
Darst SA [18]
Heumann JM [18]
Wang Y [18]
Kikkawa M [16]
Zhang L [15]
Mueller AU [14]
Bousquet C [13]
Chretien D [13]
Duchesne L [13]
Gaillard N [13]
Gibeaux R [13]
Guilloux G [13]
Guyomar C [13]
Heichette C [13]
Ku S [13]
Steinmetz MO [13]
Baumeister W [12]
Chen F [12]
Hite RK [12]
Holthauzen LM [12]
Kalichava A [12]
Liu JF [12]
Liu JK [12]
Lu Z [12]
Morikawa M [12]
Reddy MS [12]
Reddy MV [12]
Ren G [12]
Rudenko G [12]
Seshadrinathan S [12]
White MA [12]
Yamaguchi H [12]
Zhong X [12]
Zhong XY [12]
Baker RW [11]
Chen M [11]
Plitzko JM [10]
Campbell EA [9]
Nixon BT [9]
Alavizargar A [8]
Chen J [8]
Gatsogiannis C [8]
Grange M [8]
Heuer A [8]
Jensen GJ [8]
Kalyankumar KS [8]
Klink BU [8]
Laugks U [8]
Ananda VY [7]
Bernhardt TG [7]
Cannon KS [7]
Chao LH [7]
Engel BD [7]
Gagnon MG [7]
Navarro PP [7]
Paknejad N [7]
Vettiger A [7]
Wang N [7]
Carlson LA [6]
Dahmane S [6]
Gui L [6]
Kumar S [6]
Li L [6]
Mai X [6]
S Cannon K [6]
Sarsam RD [6]
Stjepanovic G [6]
Tedamrongwanish T [6]
Ti R [6]
Zhang K [6]
Zhu L [6]
Abdelkareem M [5]
Ahmed R [5]
Asante-appiah E [5]
Bajpai P [5]
Bao Y [5]
Bosse JB [5]
Buscher J [5]
Calero G [5]
Castaneda JC [5]
Chakravarthy C [5]
Chandele A [5]
Cheedarla N [5]
Cheng J [5]
Chiu C [5]
Crucifix C [5]
Davis CW [5]
Davis-gardner ME [5]
Devbhandari S [5]
Diamond TL [5]
Dixit K [5]
Edara VV [5]
Engstrom MD [5]
Frank F [5]
Gabelli SB [5]
Gomez-llorente Y [5]
Gottimukkala K [5]
Grunewald K [5]
Guo X [5]

Journal

NAT COMMUN [54]
BIORXIV [51]
ELIFE [39]
TO BE PUBLISHED [29]
NATURE [24]
NAT STRUCT MOL BIOL [21]
PNAS [20]
SCIENCE [15]
CELL [13]
J BIOL CHEM [13]
NAT MICROBIOL [11]
MOL CELL [9]
SCI ADV [8]
EMBO J [7]
J STRUCT BIOL [7]
ACS INFECT DIS. [5]
STRUCTURE [5]
CELL REP [4]
CURR BIOL [4]
VIRUSES [4]
EMBO REP [3]
ISCIENCE [3]
J BACTERIOL [3]
PLOS BIOL [3]
PLOS COMPUT BIOL [3]
RNA [3]
BIOCHIM BIOPHYS ACTA BIOENERG [2]
BIOCHIM BIOPHYS ACTA MOL CELL RES [2]
COMMUN BIOL [2]
J CELL BIOL [2]
NUCLEIC ACIDS RES [2]
ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [1]
BLOOD [1]
CELL MOL IMMUNOL [1]
FRONT CELL INFECT MICROBIOL [1]
J MUSCLE RES CELL MOTIL [1]
MBIO [1]
METHODS [1]
MICRO PUBL BIOL [1]
MOL BIOL CELL [1]
MOL MICROBIOL [1]
NANOSCALE [1]
NAT BIOTECHNOL [1]
NAT CHEM BIOL [1]
NAT METHODS [1]
NAT NANOTECHNOL [1]

Software

Microscope

Electron Source

Film or detector model

External links

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Showing 1 - 10 of 343. Page 1 of 35

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EMD-55103

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CryoEM density of NBEAL2 BEACH protein at secondary structure resolution

CryoEM

Release date: Sept. 30, 2026
Resolution: 6.6 Å
EM Method: Single-particle

Dahl AK, Mann D, Lystad AH, Sachse C, Simonsen A, Pankiv S

J Cell Biol (2026) 225 [ DOI: doi:10.1083/jcb.202510098 Pubmed: 42560489 ]

EMD-56168

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Bacterial antiviral defense protein PD-T7-3 H122A in complex with single-stranded DNA

Composite map

CryoEM

Release date: Sept. 16, 2026
Resolution: 2.92 Å
EM Method: Single-particle
Fitted PDBs: 9trc

Q-score: 0.447
Similar entry percentile: 26%

Puteikiene R, Vassallo CN, Silanskas A, Songailiene I, Juozapaitis J, Laub MT, Sasnauskas G

To Be Published

EMD-56172

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Bacterial antiviral defense protein PD-T7-3 H122A in complex with single-stranded DNA and a fragment of RNA

Composite map

CryoEM

Release date: Sept. 16, 2026
Resolution: 3.38 Å
EM Method: Single-particle
Fitted PDBs: 9trd

Q-score: 0.392
Similar entry percentile: 24%

Puteikiene R, Vassallo CN, Silanskas A, Songailiene I, Juozapaitis J, Laub MT, Sasnauskas G

To Be Published

EMD-56176

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3D View

Bacterial antiviral defense protein PD-T7-3 H122A in complex with a fragment of RNA

Composite map

CryoEM

Release date: Sept. 16, 2026
Resolution: 3.08 Å
EM Method: Single-particle
Fitted PDBs: 9tre

Q-score: 0.425
Similar entry percentile: 23%

Puteikiene R, Vassallo CN, Silanskas A, Songailiene I, Juozapaitis J, Laub MT, Sasnauskas G

To Be Published

EMD-52908

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Cryo-EM structure of the NLRP3 decamer bound to the inhibitor BAL-1516

CryoEM

Release date: Sept. 9, 2026
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 9q8v

Q-score: 0.232
Similar entry percentile: 2%

Torp J, Geyer M

To Be Published

EMD-66008

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Cryo-electron tomography of AF647-gold-conjugated W27 binding to E.Coli membrane blebs.

CryoEM

Release date: Sept. 9, 2026
EM Method: Tomography

Furuya G, Usui F, Takahashi K, Nagatoishi S, Maeda R, Tamano R, Ohno T, Sasaki K, Morita N, Gao P, Eisenstein F, Kosuge H, Shirakawa M, Arai H, Danev R, Mori H, Kikkawa M, Sando S, Dohmae N, Hakoshima T, Sugiura Y, Tsumoto K, Shinkura R

To Be Published

EMD-77368

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HIV-1 reverse transcriptase in complex with DNAddG Aptamer and unincorporated ISL-triphosphate

CryoEM

Release date: Sept. 2, 2026
Resolution: 1.85 Å
EM Method: Single-particle
Fitted PDBs: 36bt

Q-score: 0.675
Similar entry percentile: 54%

Hecksel CW, Walker SN, Raheem I, Asante-Appiah E, Calero G, Diamond TL, Gabelli SB, Gomez-Llorente Y, Hayes RP, Tummala S, Vergara S, Klein DJ

Acs Infect Dis. (2026) 12 pp. 3179-3190 [ Pubmed: 42725963 DOI: doi:10.1021/acsinfecdis.6c00431 ]

EMD-77389

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HIV-1 reverse transcriptase in complex with DNA Aptamer and Incorporated dATP

CryoEM

Release date: Sept. 2, 2026
Resolution: 1.9 Å
EM Method: Single-particle
Fitted PDBs: 36cp

Q-score: 0.635
Similar entry percentile: 40%

Hecksel CW, Walker SN, Raheem I, Asante-Appiah E, Calero G, Diamond TL, Gabelli SB, Gomez-Llorente Y, Hayes RP, Tummala S, Vergara S, Klein DJ

Acs Infect Dis. (2026) 12 pp. 3179-3190 [ Pubmed: 42725963 DOI: doi:10.1021/acsinfecdis.6c00431 ]

EMD-77393

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HIV-1 reverse transcriptase F227C in complex with DNAddG Aptamer and unincorporated ISL-triphosphate

CryoEM

Release date: Sept. 2, 2026
Resolution: 1.9 Å
EM Method: Single-particle
Fitted PDBs: 36cw

Q-score: 0.644
Similar entry percentile: 45%

Hecksel CW, Walker SN, Raheem I, Asante-Appiah E, Calero G, Diamond TL, Gabelli SB, Gomez-Llorente Y, Hayes RP, Tummala S, Vergara S, Klein DJ

Acs Infect Dis. (2026) 12 pp. 3179-3190 [ Pubmed: 42725963 DOI: doi:10.1021/acsinfecdis.6c00431 ]

EMD-77401

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3D View

HIV-1 reverse transcriptase F227C in complex with DNA Aptamer and Incorporated dATP

CryoEM

Release date: Sept. 2, 2026
Resolution: 2.1 Å
EM Method: Single-particle
Fitted PDBs: 36dk

Q-score: 0.657
Similar entry percentile: 72%

Hecksel CW, Walker SN, Raheem I, Asante-Appiah E, Calero G, Diamond TL, Gabelli SB, Gomez-Llorente Y, Hayes RP, Tummala S, Vergara S, Klein DJ

Acs Infect Dis. (2026) 12 pp. 3179-3190 [ Pubmed: 42725963 DOI: doi:10.1021/acsinfecdis.6c00431 ]

Sort by: Download

Showing 1 - 10 of 343. Page 1 of 35

Display:

Statistics

Filter By

Current Database

Current status

Sample type

Organism

Homo sapiens [116]
Escherichia coli [45]
Mus musculus [31]
Synthetic construct [27]
Saccharomyces cerevisiae [20]
Severe acute respiratory syndrome coronavirus [15]
Escherichia coli [14]
Danio rerio [12]
Sus scrofa [9]
Rattus norvegicus [8]
Pseudomonas aeruginosa [8]
Latrodectus tredecimguttatus [8]
Xenopus laevis [7]
Lama glama [6]
Human immunodeficiency virus 1 [5]
Varicellovirus suidalpha1 [5]
Saccharomyces cerevisiae [5]
Aquifex aeolicus [5]
Aquifex aeolicus [4]
Neospora caninum [4]
Chlamydomonas reinhardtii [4]
Plasmodium falciparum [4]
Human cytomegalovirus [3]
Severe acute respiratory syndrome coronavirus [3]
Plasmodium falciparum [3]
Allium cepa [3]
Gallus gallus [3]
Synechocystis sp. pcc 6803 [2]
Mumps orthorubulavirus [2]
Hiv-1 vector pnl4-3 [2]
Mycobacterium tuberculosis [2]
Staphylococcus aureus [2]
Pseudomonas protegens [2]
Bacillus sp. (strain ps3) [2]
Mycolicibacterium smegmatis [2]
Arabidopsis thaliana [2]
Candidatus amoebophilus asiaticus [2]
Saccharomyces cerevisiae [2]
Tetrahymena thermophila [2]
Vibrio cholerae [2]
Adeno-associated dependoparvovirus b [2]
Meleagris gallopavo [2]
Sus scrofa [2]
Bos taurus [2]
Oryctolagus cuniculus [2]
Cricetulus griseus [1]
Mesocricetus auratus [1]
(no species) [1]
Human cytomegalovirus [1]
Salmonella virus spn3us [1]
Venezuelan equine encephalitis virus [1]
Hepacivirus c [1]
Influenza a virus [1]
Pseudomonas aeruginosa [1]
Nostoc sp. [1]
Cowpea chlorotic mottle virus [1]
Staphylococcus aureus [1]
Lachnospiraceae bacterium ma2020 [1]
Acanthamoeba polyphaga mimivirus [1]
Caulobacter vibrioides [1]
Candidatus heimdallarchaeota archaeon [1]
Staphylococcaceae bacterium [1]
Chaetomium thermophilum [1]
Metamycoplasma arthritidis [1]
(no species) [1]
Methanosarcina mazei [1]
(no species) [1]
Burkholderia thailandensis [1]
Adeno-associated virus [1]
Cyanidium caldarium [1]
Pseudomonas phage phikz [1]
Limonium bicolor [1]
Physcomitrium patens [1]
(no species) [1]
Thalassiosira pseudonana [1]
Dictyostelium discoideum [1]
Toxoplasma gondii [1]
Solanum lycopersicum [1]
Alphainfluenzavirus influenzae [1]
Leptospira biflexa [1]
Phytophthora infestans [1]
Schizosaccharomyces pombe [1]
Vaccinia virus [1]
Plasmodium falciparum [1]
Klebsiella pneumoniae [1]
Toxoplasma gondii [1]
Ostreococcus tauri [1]
Drosophila melanogaster [1]
Apis mellifera [1]
Chaetomium thermophilum [1]
Strongylocentrotus purpuratus [1]
Phage #d [1]
Mycobacterium tuberculosis [1]
Shewanella sp. (strain ana-3) [1]
(no species) [1]
Canis lupus [1]

EM Method

Resolution

Release Date

Author by name

Liu J [20]
Darst SA [18]
Heumann JM [18]
Wang Y [18]
Kikkawa M [16]
Zhang L [15]
Mueller AU [14]
Bousquet C [13]
Chretien D [13]
Duchesne L [13]
Gaillard N [13]
Gibeaux R [13]
Guilloux G [13]
Guyomar C [13]
Heichette C [13]
Ku S [13]
Steinmetz MO [13]
Baumeister W [12]
Chen F [12]
Hite RK [12]
Holthauzen LM [12]
Kalichava A [12]
Liu JF [12]
Liu JK [12]
Lu Z [12]
Morikawa M [12]
Reddy MS [12]
Reddy MV [12]
Ren G [12]
Rudenko G [12]
Seshadrinathan S [12]
White MA [12]
Yamaguchi H [12]
Zhong X [12]
Zhong XY [12]
Baker RW [11]
Chen M [11]
Plitzko JM [10]
Campbell EA [9]
Nixon BT [9]
Alavizargar A [8]
Chen J [8]
Gatsogiannis C [8]
Grange M [8]
Heuer A [8]
Jensen GJ [8]
Kalyankumar KS [8]
Klink BU [8]
Laugks U [8]
Ananda VY [7]
Bernhardt TG [7]
Cannon KS [7]
Chao LH [7]
Engel BD [7]
Gagnon MG [7]
Navarro PP [7]
Paknejad N [7]
Vettiger A [7]
Wang N [7]
Carlson LA [6]
Dahmane S [6]
Gui L [6]
Kumar S [6]
Li L [6]
Mai X [6]
S Cannon K [6]
Sarsam RD [6]
Stjepanovic G [6]
Tedamrongwanish T [6]
Ti R [6]
Zhang K [6]
Zhu L [6]
Abdelkareem M [5]
Ahmed R [5]
Asante-appiah E [5]
Bajpai P [5]
Bao Y [5]
Bosse JB [5]
Buscher J [5]
Calero G [5]
Castaneda JC [5]
Chakravarthy C [5]
Chandele A [5]
Cheedarla N [5]
Cheng J [5]
Chiu C [5]
Crucifix C [5]
Davis CW [5]
Davis-gardner ME [5]
Devbhandari S [5]
Diamond TL [5]
Dixit K [5]
Edara VV [5]
Engstrom MD [5]
Frank F [5]
Gabelli SB [5]
Gomez-llorente Y [5]
Gottimukkala K [5]
Grunewald K [5]
Guo X [5]

Journal

NAT COMMUN [54]
BIORXIV [51]
ELIFE [39]
TO BE PUBLISHED [29]
NATURE [24]
NAT STRUCT MOL BIOL [21]
PNAS [20]
SCIENCE [15]
CELL [13]
J BIOL CHEM [13]
NAT MICROBIOL [11]
MOL CELL [9]
SCI ADV [8]
EMBO J [7]
J STRUCT BIOL [7]
ACS INFECT DIS. [5]
STRUCTURE [5]
CELL REP [4]
CURR BIOL [4]
VIRUSES [4]
EMBO REP [3]
ISCIENCE [3]
J BACTERIOL [3]
PLOS BIOL [3]
PLOS COMPUT BIOL [3]
RNA [3]
BIOCHIM BIOPHYS ACTA BIOENERG [2]
BIOCHIM BIOPHYS ACTA MOL CELL RES [2]
COMMUN BIOL [2]
J CELL BIOL [2]
NUCLEIC ACIDS RES [2]
ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [1]
BLOOD [1]
CELL MOL IMMUNOL [1]
FRONT CELL INFECT MICROBIOL [1]
J MUSCLE RES CELL MOTIL [1]
MBIO [1]
METHODS [1]
MICRO PUBL BIOL [1]
MOL BIOL CELL [1]
MOL MICROBIOL [1]
NANOSCALE [1]
NAT BIOTECHNOL [1]
NAT CHEM BIOL [1]
NAT METHODS [1]
NAT NANOTECHNOL [1]

Software

Microscope

Electron Source

Film or detector model

External links