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SPECIES
Filter By
Current Database
- EMDB [3102]
- EMPIAR [30]
Current status
- REL [3132]
Sample type
- Protein [2072]
- Complex [1843]
- Ligand [1120]
- Virus [973]
- RNA [632]
- Sample [241]
- Cellular component [171]
- Cell [138]
- DNA [137]
- Other [11]
- Tissue [10]
Organism
- Homo sapiens [754]
- Escherichia coli [176]
- Mus musculus [153]
- Escherichia coli [144]
- (no species) [126]
- Synthetic construct [86]
- (no species) [65]
- Bos taurus [65]
- (no species) [54]
- Rattus norvegicus [46]
- Arabidopsis thaliana [46]
- Pseudomonas phage phi6 [45]
- Staphylococcus phage 812 [42]
- Sus scrofa [39]
- Severe acute respiratory syndrome coronavirus [38]
- (no species) [37]
- Brome mosaic virus [29]
- (no species) [26]
- Paramecium bursaria chlorella virus 1 [25]
- Human immunodeficiency virus 1 [22]
- (no species) [22]
- (no species) [22]
- Mycobacterium phage bxb1 [21]
- Escherichia coli [20]
- Potyvirus atuberosi [19]
- Enquatrovirus n4 [18]
- (no species) [18]
- Bacillus phage phi29 [17]
- Bluetongue virus [16]
- Felixounavirus johannrwettstein [16]
- (no species) [16]
- Apis mellifera [16]
- Hepatitis b virus [15]
- (no species) [15]
- (no species) [14]
- (no species) [14]
- Escherichia virus qbeta [14]
- (no species) [14]
- Escherichia virus t7 [13]
- Cypovirus 1 [13]
- Certrevirus phite [13]
- (no species) [13]
- (no species) [13]
- Oryctolagus cuniculus [13]
- (no species) [12]
- (no species) [12]
- Escherichia virus qbeta [12]
- Bacillus subtilis [11]
- (no species) [11]
- Agrobacterium phage milano [11]
- Thermus virus p74-26 [11]
- (no species) [11]
- Human herpesvirus 3 [10]
- (no species) [10]
- Caulobacter vibrioides [10]
- 2080449 [10]
- (no species) [10]
- Escherichia coli [10]
- African swine fever virus [9]
- Schmittlotzvirus sv771 [9]
- Potato virus y [9]
- Escherichia phage lambda [9]
- Staphylococcus virus 80alpha [9]
- (no species) [8]
- (no species) [8]
- Pseudomonas virus prd1 [8]
- Middle east respiratory syndrome-related coronavirus [8]
- Acinetobacter phage ap205 [8]
- Kehishuvirus primarius [8]
- Pseudomonas virus pa223 [8]
- (no species) [8]
- Rotavirus a [8]
- Salmonella phage p22 [8]
- Vicugna pacos [8]
- Legionella pneumophila [8]
- Dictyostelium discoideum [8]
- (no species) [8]
- Banna virus [8]
- Xenopus laevis [8]
- Porcine circovirus 2 [8]
- Canis lupus [8]
- (no species) [7]
- Simian foamy virus [7]
- Staphylococcus aureus [7]
- Mycobacterium tuberculosis [7]
- Dinoroseobacter phage vb_dshs-r4c [7]
- Escherichia virus t5 [7]
- Autographa californica multiple nucleopolyhedrovirus [7]
- Chikungunya virus [7]
- Komagataella pastoris [7]
- Escherichia coli [7]
- (no species) [7]
- Human herpesvirus 1 [6]
- Human herpesvirus 2 [6]
- Enterobacteria phage t4 [6]
- Pseudomonas phage pp7 [6]
- Enterovirus b [6]
- Phimunavirus fm1 [6]
- Emiliania huxleyi virus 201 [6]
- (no species) [6]
EM Method
- Single-particle [2410]
- Helical reconstruction [296]
- Tomography [240]
- Subtomogram averaging [155]
- Electron Crystallography [1]
Resolution
- < 2Å [14]
- ≥ 2Å and < 3Å [711]
- ≥ 3Å and < 4Å [1249]
- ≥ 4Å and < 5Å [269]
- ≥ 5Å and < 6Å [51]
- ≥ 6Å and < 8Å [125]
- ≥ 8Å and < 12Å [133]
- ≥ 12Å and < 16Å [126]
- ≥ 16Å and < 20Å [62]
- ≥ 20Å and < 30Å [110]
- ≥ 30Å [64]
Model molecular weight
- 0-50 kDa [32]
- 50-100 kDa [149]
- 100-250 kDa [465]
- 250-500 kDa [241]
- 500-1000 kDa [186]
- 1-2 MDa [305]
- 2-5 MDa [495]
- 5-10 MDa [64]
- > 10 MDa [69]
Release Date
- 2026 [360]
- 2025 [599]
- 2024 [528]
- 2023 [423]
- 2022 [223]
- 2021 [148]
- 2020 [179]
- 2019 [214]
- 2018 [57]
- 2017 [85]
- 2016 [104]
- 2015 [52]
- 2014 [26]
- 2013 [51]
- 2012 [15]
- 2011 [7]
- 2010 [7]
- 2009 [9]
- 2008 [3]
- 2007 [26]
- 2006 [6]
- 2005 [6]
- 2004 [1]
- 2003 [2]
- 2002 [1]
Author by name
- Liu H [147]
- Liu J [143]
- Zhang Y [124]
- Zhang X [122]
- Liu C [116]
- Li D [104]
- Zhang J [102]
- Wang J [99]
- Liu Y [95]
- Li Y [90]
- Ren G [86]
- Chen Y [81]
- Zhou ZH [80]
- Huiskonen JT [78]
- Zhang K [78]
- Liu X [76]
- Beckmann R [75]
- Liu Z [74]
- Li W [71]
- Zhao X [67]
- Lei D [66]
- Lei M [65]
- Xu C [65]
- Marino JP [64]
- Li X [63]
- Baumeister W [61]
- Xiao H [61]
- Li S [58]
- Chen W [57]
- Li A [57]
- Plevka P [57]
- Chiu W [54]
- Novacek J [54]
- Hirst J [53]
- Sun L [53]
- Chai P [52]
- Korostelev AA [52]
- Sali A [52]
- Song K [52]
- Wang X [52]
- Wang Y [52]
- Zheng W [52]
- Li J [51]
- Jasnin M [50]
- Stevens R [50]
- Stevens RC [50]
- Tao YQ [50]
- White K [50]
- White KL [50]
- Yu B [50]
- Koritnik N [49]
- Liu HR [49]
- Podobnik M [49]
- Rossmann MG [49]
- Stuart DI [49]
- Lin J [48]
- Berninghausen O [47]
- Demo G [47]
- Loveland AB [46]
- Wang L [46]
- Wang S [45]
- Ward AB [45]
- Yang X [44]
- Rodnina MV [43]
- Song J [43]
- Wu S [43]
- Siborova M [42]
- Spahn CMT [42]
- Sun X [42]
- Cheng L [41]
- Ilca SL [41]
- Yin Z [41]
- Burton DR [40]
- Yang F [40]
- Benesik M [39]
- Cheng J [39]
- Zhang S [39]
- Crotty S [38]
- Irvine DJ [38]
- Zheng J [38]
- Bostina M [37]
- Pantucek R [37]
- Poranen MM [37]
- Yan R [37]
- Murata K [36]
- Nikolay R [36]
- Schmid MF [36]
- Zhu C [36]
- De S [35]
- Guo W [35]
- Hodgkinson-bean J [35]
- Paulo JA [35]
- Rutter GL [35]
- Conway JF [34]
- Li Z [34]
- Liao M [34]
- Shin Y-C [34]
- Shin YC [34]
- Zhang P [34]
- Zhang Z [34]
Author by ORCID
- Ren G [86]
- Lei M [64]
- Xiao H [55]
- Zhou ZH [53]
- Chiu W [53]
- Zhang K [52]
- Hirst J [52]
- Korostelev AA [52]
- Plevka P [52]
- Baumeister W [51]
- Beckmann R [51]
- Chai P [50]
- Huiskonen JT [50]
- Sali A [50]
- Sun L [50]
- Jasnin M [50]
- Zhang X [50]
- Novacek J [49]
- Demo G [47]
- Poranen MM [37]
- Siborova M [37]
- Bostina M [36]
- Nikolay R [36]
- Hodgkinson-bean J [35]
- Yin Z [35]
- Sun X [35]
- Rutter GL [35]
- Rodnina MV [34]
- Schmid MF [34]
- Podobnik M [33]
- Makinen K [33]
- De S [33]
- Pollari M [33]
- Koritnik N [33]
- Kezar A [33]
- Liu J [33]
- Guo W [32]
- Pantucek R [32]
- Conway JF [32]
- Wilson DN [32]
- Zheng J [32]
- Lin J [31]
- Bailey EJ [31]
- Lomakin IB [31]
- Wolf M [31]
- Murata K [31]
- Xiong Y [31]
- Zdorevskyi O [31]
- Wang S [31]
- Wang J [31]
- Zhang Y [31]
- Latorre-muro P [31]
- Sharma V [31]
- Ayala R [31]
- Bridges HR [30]
- Denk T [29]
- Zhang J [29]
- Berninghausen O [29]
- Wang F [29]
- Fischer N [28]
- Bamford DH [28]
- Chung I [27]
- Cheng J [27]
- Pauthner MG [26]
- Murrell B [26]
- Melo MB [26]
- Upadhyay AA [26]
- Schief WR [26]
- Cottrell CA [26]
- Martin JT [26]
- Carnathan DG [26]
- Dunigan DD [25]
- Shao Q [25]
- Fuzik T [25]
- Klose T [25]
- Spahn CMT [25]
- Van Etten Jl [25]
- Ho MC [25]
- Guo M [25]
- Cui Y [25]
- Liu Y [25]
- Noel EA [25]
- Fang Q [25]
- Wang A [25]
- Zhao X [25]
- Agarkova IV [25]
- Lauer SM [25]
- Chakravarty A [24]
- Ishiguro K [24]
- Butcher SJ [24]
- Beren C [24]
- Kotecha A [24]
- Rao ALN [24]
- Klinge S [24]
- Vanden Broeck A [24]
- Knobler CM [24]
- Wright JJ [23]
- Loveland AB [23]
- Eskelin K [23]
- Zhou CZ [23]
Journal
- NAT COMMUN [569]
- TO BE PUBLISHED [390]
- PNAS [197]
- NATURE [194]
- CELL [140]
- SCIENCE [131]
- J VIROL [122]
- COMMUN BIOL [104]
- BIORXIV [95]
- SCI ADV [90]
- NAT STRUCT MOL BIOL [84]
- STRUCTURE [78]
- NUCLEIC ACIDS RES [76]
- SCI REP [76]
- ELIFE [74]
- MOL CELL [73]
- J MOL BIOL [58]
- CELL RES [41]
- ACTA CRYSTALLOGR D STRUCT BIOL [34]
- EMBO J [32]
- NAT MICROBIOL [31]
- PLOS PATHOG [31]
- CELL REP [30]
- PLOS BIOL [26]
- VIRUSES [25]
- NAT CHEM BIOL [22]
- CELL DISCOV [20]
- J STRUCT BIOL [17]
- NEURON [16]
- CURR BIOL [14]
- ISME J [13]
- J STRUCT BIOL X [13]
- NAT PLANTS [13]
- RES SQ [11]
- GENOME BIOL EVOL [10]
- MBIO [10]
- J BIOL CHEM [9]
- J CELL SCI [9]
- PROTEIN CELL [9]
- VIROLOGY [9]
- PLANT COMMUN. [8]
- PNAS NEXUS [8]
- PROTEIN SCI [8]
- ADV SCI [7]
- INT J MOL SCI [7]
- SIGNAL TRANSDUCT TARGET THER [7]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [6]
- BIOCHEM J [6]
- FEBS OPEN BIO [6]
- HEMASPHERE [6]
- NAT METHODS [6]
- SCI IMMUNOL [6]
- ACS NANO [5]
- ISCIENCE [5]
- J AM CHEM SOC [5]
- MICROORGANISMS [5]
- RNA [5]
- ACTA NEUROPATHOL [4]
- BIOCHEM BIOPHYS RES COMMUN [4]
- BIOCHIM BIOPHYS ACTA [4]
- INT J BIOL MACROMOL [4]
- J.BIOCHEM. [4]
- NAT METAB [4]
- NATL SCI REV [4]
- PLANT CELL [4]
- ANGEW CHEM INT ED ENGL [3]
- BIOCHEMISTRY [3]
- BIOCHIM BIOPHYS ACTA MOL CELL RES [3]
- CELL HOST MICROBE [3]
- IUCRJ [3]
- J BACTERIOL [3]
- J GEN PHYSIOL [3]
- MEDRXIV [3]
- SCI TRANSL MED [3]
- BIOCHIM BIOPHYS ACTA BIOENERG [2]
- BLOOD [2]
- CANCER DISCOV [2]
- CIRCULATION [2]
- EMBO REP [2]
- FEBS LETT [2]
- J MED CHEM [2]
- J.MOL.CELL.CARDIOL. [2]
- MOL THER ADV [2]
- ORAL SCIENCE AND HOMEOSTATIC MEDICINE [2]
- PHILOS.TRANS.R.SOC.LOND.B BIOL.SCI. [2]
- PLOS ONE [2]
- VACCINES (BASEL) [2]
- ACS CENTRAL SCIENCE [1]
- ACS CHEM BIOL [1]
- ACTA BIOCHIM.BIOPHYS.SIN. [1]
- ADV HEALTHC MATER [1]
- AGING (ALBANY NY) [1]
- APPL ENVIRON MICROBIOL [1]
- BIO PROTOC [1]
- BIOMOLECULES [1]
- BIOPHYS J [1]
- BRAIN [1]
- CELL CHEM BIOL [1]
- CELL METAB. [1]
- CURR TOP DEV BIOL [1]
Software
- RELION [802]
- CRYOSPARC [582]
- CTFFIND [142]
- GCTF [99]
- FREALIGN [68]
- IMOD [68]
- SPIDER [57]
- EMAN [39]
- JSPR [39]
- CHIMERA [36]
- EMAN2 [32]
- CISTEM [28]
- COOT [26]
- AUTO3DEM [23]
- DYNAMO [21]
- J3DR [16]
- JALIGN [16]
- MRC [11]
- EMAN2, SPIDER, XMIPP [10]
- IMIRS [10]
- BSOFT [9]
- IMAGIC [9]
- WARP [8]
- CTFPHASEFLIP [7]
- AV3 [6]
- CRYOLO [6]
- IMOD, DYNAMO [6]
- PHENIX [6]
- TOM [6]
- XMIPP [6]
- EMCLARITY [5]
- EMPFT, POR, P3DR [5]
- MPSA, EMAN, EMAN2 [5]
- NOVACTF [5]
- UCSF CHIMERA [5]
- CTFFIND4 [4]
- IHRSR [4]
- IMOD, EMAN, EMAN2, TOMOHUNTER [4]
- JSPR, EMAN, EMAN2 [4]
- PEET [4]
- PROTOMO [4]
- CTFFIND3 [3]
- EMFIT [3]
- ETOMO [3]
- IMOD, PROTOMO, I3, EMAN [3]
- PFT [3]
- PFT2, EM3DR2, POR, P3DR [3]
- SCIPION [3]
- SITUS [3]
- TOMO3D [3]
- UCSF CHIMERAX [3]
- AUTO3DEM, CTFFIND3 [2]
- AUTO3DEM, ROBEM, AUTOPP [2]
- BSHOW, XMIPP [2]
- EMAN, JSPR [2]
- EMAN2, RELION [2]
- FREALIGN, UPPSALA_PACKAGE [2]
- IMAGIC5 [2]
- IMOD, PEET, BSOFT [2]
- IMOD, SPIDER, BSOFT [2]
- ISAFS [2]
- ISOLDE [2]
- MOTIONCORR2 [2]
- MPSA [2]
- NAMD [2]
- P3DR [2]
- PHOELIX, SUPRIM [2]
- PYTOM [2]
- RELION, 1.3 [2]
- SAVR [2]
- SPIDER, EMAN [2]
- SPRING [2]
- STOPGAP [2]
- TOM, AV3 [2]
- AIMLESS [1]
- BOXER, CTFFIND3, CTFMIX, AUTO3DEM [1]
- BSOFT, JSUBTOMO [1]
- CCP4 PACKAGE [1]
- CHIMERA, COOT [1]
- CHIMERA, MDFF [1]
- CHIMERA, MDFF, COOT [1]
- CHIMERA,SITUS [1]
- COLORES [1]
- COOT, PHENIX [1]
- ELITE3D, FREALIGN [1]
- EM-PACKAGE, TOM FOR MATLAB [1]
- EMAN PFT P3DR POR [1]
- EMAN SPIDER [1]
- EMAN, BSOFT [1]
- EMAN, HIMPOSE, SPIDER [1]
- EMAN, PYTHON SCRIPT FOR ASYMMETRIC RECONSTRUCTION [1]
- EMAN, RELION, IMOD, IMAGIC [1]
- EMAN, SPIDER [1]
- EMAN,EMAN2 [1]
- EMAN1, EMAN2 [1]
- EMAN2, J3DR, JALIGN, BSOFT [1]
- EMAN2, SPIDER, BRANDEIS, HELICAL, PACKAGE, IHRSR [1]
- EMBL ICOSAHEDRAL [1]
- EMFIT SR5 [1]
- EMREADY [1]
Microscope
- FEI TITAN KRIOS [1586]
- TFS KRIOS [626]
- FEI TALOS ARCTICA [143]
- TFS GLACIOS [104]
- FEI POLARA 300 [89]
- FEI TECNAI F30 [72]
- FEI TECNAI F20 [64]
- ZEISS LIBRA120PLUS [64]
- FEI TITAN [57]
- JEOL CRYO ARM 300 [47]
- JEOL 2200FS [35]
- FEI TECNAI 12 [30]
- JEOL 3200FSC [25]
- FEI/PHILIPS CM300FEG/T [23]
- FEI TECNAI ARCTICA [22]
- FEI TECNAI SPIRIT [17]
- FEI/PHILIPS CM200FEG [15]
- FEI/PHILIPS CM120T [12]
- TFS TALOS [11]
- FEI TECNAI 20 [10]
- JEOL 2010F [9]
- JEOL 2200FSC [8]
- JEOL 3200FS [7]
- FEI/PHILIPS CM200T [4]
- JEOL 2100F [4]
- JEOL 2100 [3]
- TFS TALOS F200C [3]
- FEI MORGAGNI [2]
- FEI TECNAI 10 [2]
- FEI/PHILIPS CM200FEG/ST [2]
- FEI/PHILIPS CM300FEG/HE [2]
- JEOL 1400/HR YPS FEG [2]
- JEOL CRYO ARM 200 [2]
- TFS TALOS L120C [2]
- FEI TECNAI SPHERA [1]
- FEI/PHILIPS CM12 [1]
- FEI/PHILIPS CM300FEG/ST [1]
- FEI/PHILIPS EM400 [1]
- JEOL 2010 [1]
- JEOL 2011 [1]
- OTHER [1]
Electron Source
- FIELD EMISSION GUN [2953]
- LAB6 [132]
- OTHER [14]
- TUNGSTEN HAIRPIN [3]
Film or detector model
- GATAN K3 6K X 4K [827]
- GATAN K2 SUMMIT 4K X 4K [496]
- GATAN K3 BIOQUANTUM 6K X 4K [466]
- FEI FALCON III 4K X 4K [248]
- FEI FALCON IV 4K X 4K [229]
- FEI FALCON II 4K X 4K [168]
- GATAN ULTRASCAN 4000 4K X 4K [136]
- GATAN K2 QUANTUM 4K X 4K [119]
- KODAK SO-163 FILM [93]
- GATAN K3 BIOCONTINUUM 6K X 4K [67]
- TFS FALCON 4I 4K X 4K [67]
- FEI EAGLE 4K X 4K [30]
- OTHER [21]
- FEI EAGLE 2K X 2K [12]
- GATAN K2 BASE 4K X 4K [12]
- GENERIC CCD [12]
- TVIPS TEMCAM-F415 4K X 4K [12]
- DIRECT ELECTRON DE-20 5K X 3K [10]
- GATAN K2 4K X 4K [9]
- FEI CETA 4K X 4K [8]
- TVIPS TEMCAM-F416 4K X 4K [7]
- DIRECT ELECTRON DE-12 4K X 3K [5]
- GATAN ORIUS SC200 2K X 2K [5]
- GENERIC CCD 2K X 2K [5]
- GENERIC GATAN [5]
- GATAN MULTISCAN [3]
- GENERIC TVIPS 4K X 4K [3]
- DECTRIS SINGLA 1K X 1K [2]
- DIRECT ELECTRON DE-10 5K X 4K [2]
- TVIPS TEMCAM-F816 8K X 8K [2]
- DIRECT ELECTRON APOLLO 4K X 4K [1]
- DIRECT ELECTRON DE-16 4K X 4K [1]
- FEI FALCON I 4K X 4K [1]
- GATAN ULTRASCAN 1000 2K X 2K [1]
- GATAN ULTRASCAN 10000 10K X 10K [1]
- GENERIC GATAN 4K X 4K [1]
EMPIAR Experiment type
- EMDB [24]
- SBF-SEM [4]
- FIB-SEM [2]
EMPIAR Image category
- MICROGRAPHS - MULTIFRAME [20]
- MICROGRAPHS - SINGLE FRAME [5]
- TILT SERIES [5]
- STITCHED MAPS [1]
External links
- PDB [3076]
- UniProt [1871]
- PDBe-Kb [1743]
- InterPro [1603]
- Gene Ontology [1575]
- AlphaFold DB [1545]
- Pfam [1460]
- ChEBI [1055]
- DrugBank [968]
- ChEMBL [967]
- Complex Portal [661]
- EMPIAR [302]
- SCOP2 [28]
- CATH [26]
- EMDB [24]
CryoEM
Release date: July 8, 2026
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 28to
Q-score: 0.511
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 28to
Q-score: 0.511
Dlamini LS, Sewell BT
To Be Published
CryoEM
Release date: July 8, 2026
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 9o7m
Q-score: 0.354
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 9o7m
Q-score: 0.354
Merighi DGS, Pompeu GC, Araujo GG, Silva de Souza A, Sgro GG, Farah CS, Guzzo CR
Structure (2026) [ DOI: doi:10.1016/j.str.2026.05.009 Pubmed: 42309054 ]
CryoEM
Release date: July 8, 2026
Resolution: 3.6 Å
EM Method: Helical reconstruction
Fitted PDBs: 9ofn
Q-score: 0.364
Resolution: 3.6 Å
EM Method: Helical reconstruction
Fitted PDBs: 9ofn
Q-score: 0.364
Fernandez IS, Sternberg SH
To Be Published
CryoEM
Release date: July 8, 2026
Resolution: 7.0 Å
EM Method: Helical reconstruction
Resolution: 7.0 Å
EM Method: Helical reconstruction
Fernandez IS, Sternberg SH
To Be Published
CryoEM
Release date: July 8, 2026
Resolution: 2.01 Å
EM Method: Single-particle
Fitted PDBs: 9ow3
Q-score: 0.683
Resolution: 2.01 Å
EM Method: Single-particle
Fitted PDBs: 9ow3
Q-score: 0.683
Jin M, Rini JM
To Be Published
CryoEM
Release date: July 8, 2026
Resolution: 2.03 Å
EM Method: Single-particle
Fitted PDBs: 9ow4
Q-score: 0.655
Resolution: 2.03 Å
EM Method: Single-particle
Fitted PDBs: 9ow4
Q-score: 0.655
Jin M, Rini JM
To Be Published
CryoEM
Release date: July 8, 2026
Resolution: 1.99 Å
EM Method: Single-particle
Fitted PDBs: 9ow5
Q-score: 0.693
Resolution: 1.99 Å
EM Method: Single-particle
Fitted PDBs: 9ow5
Q-score: 0.693
Jin M, Rini JM
To Be Published
CryoEM
Release date: July 8, 2026
Resolution: 2.02 Å
EM Method: Single-particle
Fitted PDBs: 9ow6
Q-score: 0.668
Resolution: 2.02 Å
EM Method: Single-particle
Fitted PDBs: 9ow6
Q-score: 0.668
Jin M, Rini JM
To Be Published
CryoEM
Release date: July 8, 2026
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 36cr
Q-score: 0.559
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 36cr
Q-score: 0.559
King SH, Driscoll CL, Li DB, Guo D, Merchant AT, Brixi G, Wilkinson ME, Hie BL
To Be Published
CryoEM
Release date: July 1, 2026
Resolution: 4.38 Å
EM Method: Single-particle
Resolution: 4.38 Å
EM Method: Single-particle
Jiang Y, Wang Z, Xu Q, Zhang S, Su J, Sun H, Zhang C, Zhou L, Li T, Kong Z, Yu H, Zhang J, Zheng Q, Gu Y, Xia N, Li S
Structure (2026) 34 pp. 588-598.e4 [ DOI: doi:10.1016/j.str.2026.01.012 Pubmed: 41722563 ]
Filter By
Current Database
- EMDB [3102]
- EMPIAR [30]
Current status
- REL [3132]
Sample type
- Protein [2072]
- Complex [1843]
- Ligand [1120]
- Virus [973]
- RNA [632]
- Sample [241]
- Cellular component [171]
- Cell [138]
- DNA [137]
- Other [11]
- Tissue [10]
Organism
- Homo sapiens [754]
- Escherichia coli [176]
- Mus musculus [153]
- Escherichia coli [144]
- (no species) [126]
- Synthetic construct [86]
- (no species) [65]
- Bos taurus [65]
- (no species) [54]
- Rattus norvegicus [46]
- Arabidopsis thaliana [46]
- Pseudomonas phage phi6 [45]
- Staphylococcus phage 812 [42]
- Sus scrofa [39]
- Severe acute respiratory syndrome coronavirus [38]
- (no species) [37]
- Brome mosaic virus [29]
- (no species) [26]
- Paramecium bursaria chlorella virus 1 [25]
- Human immunodeficiency virus 1 [22]
- (no species) [22]
- (no species) [22]
- Mycobacterium phage bxb1 [21]
- Escherichia coli [20]
- Potyvirus atuberosi [19]
- Enquatrovirus n4 [18]
- (no species) [18]
- Bacillus phage phi29 [17]
- Bluetongue virus [16]
- Felixounavirus johannrwettstein [16]
- (no species) [16]
- Apis mellifera [16]
- Hepatitis b virus [15]
- (no species) [15]
- (no species) [14]
- (no species) [14]
- Escherichia virus qbeta [14]
- (no species) [14]
- Escherichia virus t7 [13]
- Cypovirus 1 [13]
- Certrevirus phite [13]
- (no species) [13]
- (no species) [13]
- Oryctolagus cuniculus [13]
- (no species) [12]
- (no species) [12]
- Escherichia virus qbeta [12]
- Bacillus subtilis [11]
- (no species) [11]
- Agrobacterium phage milano [11]
- Thermus virus p74-26 [11]
- (no species) [11]
- Human herpesvirus 3 [10]
- (no species) [10]
- Caulobacter vibrioides [10]
- 2080449 [10]
- (no species) [10]
- Escherichia coli [10]
- African swine fever virus [9]
- Schmittlotzvirus sv771 [9]
- Potato virus y [9]
- Escherichia phage lambda [9]
- Staphylococcus virus 80alpha [9]
- (no species) [8]
- (no species) [8]
- Pseudomonas virus prd1 [8]
- Middle east respiratory syndrome-related coronavirus [8]
- Acinetobacter phage ap205 [8]
- Kehishuvirus primarius [8]
- Pseudomonas virus pa223 [8]
- (no species) [8]
- Rotavirus a [8]
- Salmonella phage p22 [8]
- Vicugna pacos [8]
- Legionella pneumophila [8]
- Dictyostelium discoideum [8]
- (no species) [8]
- Banna virus [8]
- Xenopus laevis [8]
- Porcine circovirus 2 [8]
- Canis lupus [8]
- (no species) [7]
- Simian foamy virus [7]
- Staphylococcus aureus [7]
- Mycobacterium tuberculosis [7]
- Dinoroseobacter phage vb_dshs-r4c [7]
- Escherichia virus t5 [7]
- Autographa californica multiple nucleopolyhedrovirus [7]
- Chikungunya virus [7]
- Komagataella pastoris [7]
- Escherichia coli [7]
- (no species) [7]
- Human herpesvirus 1 [6]
- Human herpesvirus 2 [6]
- Enterobacteria phage t4 [6]
- Pseudomonas phage pp7 [6]
- Enterovirus b [6]
- Phimunavirus fm1 [6]
- Emiliania huxleyi virus 201 [6]
- (no species) [6]
EM Method
- Single-particle [2410]
- Helical reconstruction [296]
- Tomography [240]
- Subtomogram averaging [155]
- Electron Crystallography [1]
Resolution
- < 2Å [14]
- ≥ 2Å and < 3Å [711]
- ≥ 3Å and < 4Å [1249]
- ≥ 4Å and < 5Å [269]
- ≥ 5Å and < 6Å [51]
- ≥ 6Å and < 8Å [125]
- ≥ 8Å and < 12Å [133]
- ≥ 12Å and < 16Å [126]
- ≥ 16Å and < 20Å [62]
- ≥ 20Å and < 30Å [110]
- ≥ 30Å [64]
Model molecular weight
- 0-50 kDa [32]
- 50-100 kDa [149]
- 100-250 kDa [465]
- 250-500 kDa [241]
- 500-1000 kDa [186]
- 1-2 MDa [305]
- 2-5 MDa [495]
- 5-10 MDa [64]
- > 10 MDa [69]
Release Date
- 2026 [360]
- 2025 [599]
- 2024 [528]
- 2023 [423]
- 2022 [223]
- 2021 [148]
- 2020 [179]
- 2019 [214]
- 2018 [57]
- 2017 [85]
- 2016 [104]
- 2015 [52]
- 2014 [26]
- 2013 [51]
- 2012 [15]
- 2011 [7]
- 2010 [7]
- 2009 [9]
- 2008 [3]
- 2007 [26]
- 2006 [6]
- 2005 [6]
- 2004 [1]
- 2003 [2]
- 2002 [1]
Author by name
- Liu H [147]
- Liu J [143]
- Zhang Y [124]
- Zhang X [122]
- Liu C [116]
- Li D [104]
- Zhang J [102]
- Wang J [99]
- Liu Y [95]
- Li Y [90]
- Ren G [86]
- Chen Y [81]
- Zhou ZH [80]
- Huiskonen JT [78]
- Zhang K [78]
- Liu X [76]
- Beckmann R [75]
- Liu Z [74]
- Li W [71]
- Zhao X [67]
- Lei D [66]
- Lei M [65]
- Xu C [65]
- Marino JP [64]
- Li X [63]
- Baumeister W [61]
- Xiao H [61]
- Li S [58]
- Chen W [57]
- Li A [57]
- Plevka P [57]
- Chiu W [54]
- Novacek J [54]
- Hirst J [53]
- Sun L [53]
- Chai P [52]
- Korostelev AA [52]
- Sali A [52]
- Song K [52]
- Wang X [52]
- Wang Y [52]
- Zheng W [52]
- Li J [51]
- Jasnin M [50]
- Stevens R [50]
- Stevens RC [50]
- Tao YQ [50]
- White K [50]
- White KL [50]
- Yu B [50]
- Koritnik N [49]
- Liu HR [49]
- Podobnik M [49]
- Rossmann MG [49]
- Stuart DI [49]
- Lin J [48]
- Berninghausen O [47]
- Demo G [47]
- Loveland AB [46]
- Wang L [46]
- Wang S [45]
- Ward AB [45]
- Yang X [44]
- Rodnina MV [43]
- Song J [43]
- Wu S [43]
- Siborova M [42]
- Spahn CMT [42]
- Sun X [42]
- Cheng L [41]
- Ilca SL [41]
- Yin Z [41]
- Burton DR [40]
- Yang F [40]
- Benesik M [39]
- Cheng J [39]
- Zhang S [39]
- Crotty S [38]
- Irvine DJ [38]
- Zheng J [38]
- Bostina M [37]
- Pantucek R [37]
- Poranen MM [37]
- Yan R [37]
- Murata K [36]
- Nikolay R [36]
- Schmid MF [36]
- Zhu C [36]
- De S [35]
- Guo W [35]
- Hodgkinson-bean J [35]
- Paulo JA [35]
- Rutter GL [35]
- Conway JF [34]
- Li Z [34]
- Liao M [34]
- Shin Y-C [34]
- Shin YC [34]
- Zhang P [34]
- Zhang Z [34]
Author by ORCID
- Ren G [86]
- Lei M [64]
- Xiao H [55]
- Zhou ZH [53]
- Chiu W [53]
- Zhang K [52]
- Hirst J [52]
- Korostelev AA [52]
- Plevka P [52]
- Baumeister W [51]
- Beckmann R [51]
- Chai P [50]
- Huiskonen JT [50]
- Sali A [50]
- Sun L [50]
- Jasnin M [50]
- Zhang X [50]
- Novacek J [49]
- Demo G [47]
- Poranen MM [37]
- Siborova M [37]
- Bostina M [36]
- Nikolay R [36]
- Hodgkinson-bean J [35]
- Yin Z [35]
- Sun X [35]
- Rutter GL [35]
- Rodnina MV [34]
- Schmid MF [34]
- Podobnik M [33]
- Makinen K [33]
- De S [33]
- Pollari M [33]
- Koritnik N [33]
- Kezar A [33]
- Liu J [33]
- Guo W [32]
- Pantucek R [32]
- Conway JF [32]
- Wilson DN [32]
- Zheng J [32]
- Lin J [31]
- Bailey EJ [31]
- Lomakin IB [31]
- Wolf M [31]
- Murata K [31]
- Xiong Y [31]
- Zdorevskyi O [31]
- Wang S [31]
- Wang J [31]
- Zhang Y [31]
- Latorre-muro P [31]
- Sharma V [31]
- Ayala R [31]
- Bridges HR [30]
- Denk T [29]
- Zhang J [29]
- Berninghausen O [29]
- Wang F [29]
- Fischer N [28]
- Bamford DH [28]
- Chung I [27]
- Cheng J [27]
- Pauthner MG [26]
- Murrell B [26]
- Melo MB [26]
- Upadhyay AA [26]
- Schief WR [26]
- Cottrell CA [26]
- Martin JT [26]
- Carnathan DG [26]
- Dunigan DD [25]
- Shao Q [25]
- Fuzik T [25]
- Klose T [25]
- Spahn CMT [25]
- Van Etten Jl [25]
- Ho MC [25]
- Guo M [25]
- Cui Y [25]
- Liu Y [25]
- Noel EA [25]
- Fang Q [25]
- Wang A [25]
- Zhao X [25]
- Agarkova IV [25]
- Lauer SM [25]
- Chakravarty A [24]
- Ishiguro K [24]
- Butcher SJ [24]
- Beren C [24]
- Kotecha A [24]
- Rao ALN [24]
- Klinge S [24]
- Vanden Broeck A [24]
- Knobler CM [24]
- Wright JJ [23]
- Loveland AB [23]
- Eskelin K [23]
- Zhou CZ [23]
Journal
- NAT COMMUN [569]
- TO BE PUBLISHED [390]
- PNAS [197]
- NATURE [194]
- CELL [140]
- SCIENCE [131]
- J VIROL [122]
- COMMUN BIOL [104]
- BIORXIV [95]
- SCI ADV [90]
- NAT STRUCT MOL BIOL [84]
- STRUCTURE [78]
- NUCLEIC ACIDS RES [76]
- SCI REP [76]
- ELIFE [74]
- MOL CELL [73]
- J MOL BIOL [58]
- CELL RES [41]
- ACTA CRYSTALLOGR D STRUCT BIOL [34]
- EMBO J [32]
- NAT MICROBIOL [31]
- PLOS PATHOG [31]
- CELL REP [30]
- PLOS BIOL [26]
- VIRUSES [25]
- NAT CHEM BIOL [22]
- CELL DISCOV [20]
- J STRUCT BIOL [17]
- NEURON [16]
- CURR BIOL [14]
- ISME J [13]
- J STRUCT BIOL X [13]
- NAT PLANTS [13]
- RES SQ [11]
- GENOME BIOL EVOL [10]
- MBIO [10]
- J BIOL CHEM [9]
- J CELL SCI [9]
- PROTEIN CELL [9]
- VIROLOGY [9]
- PLANT COMMUN. [8]
- PNAS NEXUS [8]
- PROTEIN SCI [8]
- ADV SCI [7]
- INT J MOL SCI [7]
- SIGNAL TRANSDUCT TARGET THER [7]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [6]
- BIOCHEM J [6]
- FEBS OPEN BIO [6]
- HEMASPHERE [6]
- NAT METHODS [6]
- SCI IMMUNOL [6]
- ACS NANO [5]
- ISCIENCE [5]
- J AM CHEM SOC [5]
- MICROORGANISMS [5]
- RNA [5]
- ACTA NEUROPATHOL [4]
- BIOCHEM BIOPHYS RES COMMUN [4]
- BIOCHIM BIOPHYS ACTA [4]
- INT J BIOL MACROMOL [4]
- J.BIOCHEM. [4]
- NAT METAB [4]
- NATL SCI REV [4]
- PLANT CELL [4]
- ANGEW CHEM INT ED ENGL [3]
- BIOCHEMISTRY [3]
- BIOCHIM BIOPHYS ACTA MOL CELL RES [3]
- CELL HOST MICROBE [3]
- IUCRJ [3]
- J BACTERIOL [3]
- J GEN PHYSIOL [3]
- MEDRXIV [3]
- SCI TRANSL MED [3]
- BIOCHIM BIOPHYS ACTA BIOENERG [2]
- BLOOD [2]
- CANCER DISCOV [2]
- CIRCULATION [2]
- EMBO REP [2]
- FEBS LETT [2]
- J MED CHEM [2]
- J.MOL.CELL.CARDIOL. [2]
- MOL THER ADV [2]
- ORAL SCIENCE AND HOMEOSTATIC MEDICINE [2]
- PHILOS.TRANS.R.SOC.LOND.B BIOL.SCI. [2]
- PLOS ONE [2]
- VACCINES (BASEL) [2]
- ACS CENTRAL SCIENCE [1]
- ACS CHEM BIOL [1]
- ACTA BIOCHIM.BIOPHYS.SIN. [1]
- ADV HEALTHC MATER [1]
- AGING (ALBANY NY) [1]
- APPL ENVIRON MICROBIOL [1]
- BIO PROTOC [1]
- BIOMOLECULES [1]
- BIOPHYS J [1]
- BRAIN [1]
- CELL CHEM BIOL [1]
- CELL METAB. [1]
- CURR TOP DEV BIOL [1]
Software
- RELION [802]
- CRYOSPARC [582]
- CTFFIND [142]
- GCTF [99]
- FREALIGN [68]
- IMOD [68]
- SPIDER [57]
- EMAN [39]
- JSPR [39]
- CHIMERA [36]
- EMAN2 [32]
- CISTEM [28]
- COOT [26]
- AUTO3DEM [23]
- DYNAMO [21]
- J3DR [16]
- JALIGN [16]
- MRC [11]
- EMAN2, SPIDER, XMIPP [10]
- IMIRS [10]
- BSOFT [9]
- IMAGIC [9]
- WARP [8]
- CTFPHASEFLIP [7]
- AV3 [6]
- CRYOLO [6]
- IMOD, DYNAMO [6]
- PHENIX [6]
- TOM [6]
- XMIPP [6]
- EMCLARITY [5]
- EMPFT, POR, P3DR [5]
- MPSA, EMAN, EMAN2 [5]
- NOVACTF [5]
- UCSF CHIMERA [5]
- CTFFIND4 [4]
- IHRSR [4]
- IMOD, EMAN, EMAN2, TOMOHUNTER [4]
- JSPR, EMAN, EMAN2 [4]
- PEET [4]
- PROTOMO [4]
- CTFFIND3 [3]
- EMFIT [3]
- ETOMO [3]
- IMOD, PROTOMO, I3, EMAN [3]
- PFT [3]
- PFT2, EM3DR2, POR, P3DR [3]
- SCIPION [3]
- SITUS [3]
- TOMO3D [3]
- UCSF CHIMERAX [3]
- AUTO3DEM, CTFFIND3 [2]
- AUTO3DEM, ROBEM, AUTOPP [2]
- BSHOW, XMIPP [2]
- EMAN, JSPR [2]
- EMAN2, RELION [2]
- FREALIGN, UPPSALA_PACKAGE [2]
- IMAGIC5 [2]
- IMOD, PEET, BSOFT [2]
- IMOD, SPIDER, BSOFT [2]
- ISAFS [2]
- ISOLDE [2]
- MOTIONCORR2 [2]
- MPSA [2]
- NAMD [2]
- P3DR [2]
- PHOELIX, SUPRIM [2]
- PYTOM [2]
- RELION, 1.3 [2]
- SAVR [2]
- SPIDER, EMAN [2]
- SPRING [2]
- STOPGAP [2]
- TOM, AV3 [2]
- AIMLESS [1]
- BOXER, CTFFIND3, CTFMIX, AUTO3DEM [1]
- BSOFT, JSUBTOMO [1]
- CCP4 PACKAGE [1]
- CHIMERA, COOT [1]
- CHIMERA, MDFF [1]
- CHIMERA, MDFF, COOT [1]
- CHIMERA,SITUS [1]
- COLORES [1]
- COOT, PHENIX [1]
- ELITE3D, FREALIGN [1]
- EM-PACKAGE, TOM FOR MATLAB [1]
- EMAN PFT P3DR POR [1]
- EMAN SPIDER [1]
- EMAN, BSOFT [1]
- EMAN, HIMPOSE, SPIDER [1]
- EMAN, PYTHON SCRIPT FOR ASYMMETRIC RECONSTRUCTION [1]
- EMAN, RELION, IMOD, IMAGIC [1]
- EMAN, SPIDER [1]
- EMAN,EMAN2 [1]
- EMAN1, EMAN2 [1]
- EMAN2, J3DR, JALIGN, BSOFT [1]
- EMAN2, SPIDER, BRANDEIS, HELICAL, PACKAGE, IHRSR [1]
- EMBL ICOSAHEDRAL [1]
- EMFIT SR5 [1]
- EMREADY [1]
Microscope
- FEI TITAN KRIOS [1586]
- TFS KRIOS [626]
- FEI TALOS ARCTICA [143]
- TFS GLACIOS [104]
- FEI POLARA 300 [89]
- FEI TECNAI F30 [72]
- FEI TECNAI F20 [64]
- ZEISS LIBRA120PLUS [64]
- FEI TITAN [57]
- JEOL CRYO ARM 300 [47]
- JEOL 2200FS [35]
- FEI TECNAI 12 [30]
- JEOL 3200FSC [25]
- FEI/PHILIPS CM300FEG/T [23]
- FEI TECNAI ARCTICA [22]
- FEI TECNAI SPIRIT [17]
- FEI/PHILIPS CM200FEG [15]
- FEI/PHILIPS CM120T [12]
- TFS TALOS [11]
- FEI TECNAI 20 [10]
- JEOL 2010F [9]
- JEOL 2200FSC [8]
- JEOL 3200FS [7]
- FEI/PHILIPS CM200T [4]
- JEOL 2100F [4]
- JEOL 2100 [3]
- TFS TALOS F200C [3]
- FEI MORGAGNI [2]
- FEI TECNAI 10 [2]
- FEI/PHILIPS CM200FEG/ST [2]
- FEI/PHILIPS CM300FEG/HE [2]
- JEOL 1400/HR YPS FEG [2]
- JEOL CRYO ARM 200 [2]
- TFS TALOS L120C [2]
- FEI TECNAI SPHERA [1]
- FEI/PHILIPS CM12 [1]
- FEI/PHILIPS CM300FEG/ST [1]
- FEI/PHILIPS EM400 [1]
- JEOL 2010 [1]
- JEOL 2011 [1]
- OTHER [1]
Electron Source
- FIELD EMISSION GUN [2953]
- LAB6 [132]
- OTHER [14]
- TUNGSTEN HAIRPIN [3]
Film or detector model
- GATAN K3 6K X 4K [827]
- GATAN K2 SUMMIT 4K X 4K [496]
- GATAN K3 BIOQUANTUM 6K X 4K [466]
- FEI FALCON III 4K X 4K [248]
- FEI FALCON IV 4K X 4K [229]
- FEI FALCON II 4K X 4K [168]
- GATAN ULTRASCAN 4000 4K X 4K [136]
- GATAN K2 QUANTUM 4K X 4K [119]
- KODAK SO-163 FILM [93]
- GATAN K3 BIOCONTINUUM 6K X 4K [67]
- TFS FALCON 4I 4K X 4K [67]
- FEI EAGLE 4K X 4K [30]
- OTHER [21]
- FEI EAGLE 2K X 2K [12]
- GATAN K2 BASE 4K X 4K [12]
- GENERIC CCD [12]
- TVIPS TEMCAM-F415 4K X 4K [12]
- DIRECT ELECTRON DE-20 5K X 3K [10]
- GATAN K2 4K X 4K [9]
- FEI CETA 4K X 4K [8]
- TVIPS TEMCAM-F416 4K X 4K [7]
- DIRECT ELECTRON DE-12 4K X 3K [5]
- GATAN ORIUS SC200 2K X 2K [5]
- GENERIC CCD 2K X 2K [5]
- GENERIC GATAN [5]
- GATAN MULTISCAN [3]
- GENERIC TVIPS 4K X 4K [3]
- DECTRIS SINGLA 1K X 1K [2]
- DIRECT ELECTRON DE-10 5K X 4K [2]
- TVIPS TEMCAM-F816 8K X 8K [2]
- DIRECT ELECTRON APOLLO 4K X 4K [1]
- DIRECT ELECTRON DE-16 4K X 4K [1]
- FEI FALCON I 4K X 4K [1]
- GATAN ULTRASCAN 1000 2K X 2K [1]
- GATAN ULTRASCAN 10000 10K X 10K [1]
- GENERIC GATAN 4K X 4K [1]
EMPIAR Experiment type
- EMDB [24]
- SBF-SEM [4]
- FIB-SEM [2]
EMPIAR Image category
- MICROGRAPHS - MULTIFRAME [20]
- MICROGRAPHS - SINGLE FRAME [5]
- TILT SERIES [5]
- STITCHED MAPS [1]
External links
- PDB [3076]
- UniProt [1871]
- PDBe-Kb [1743]
- InterPro [1603]
- Gene Ontology [1575]
- AlphaFold DB [1545]
- Pfam [1460]
- ChEBI [1055]
- DrugBank [968]
- ChEMBL [967]
- Complex Portal [661]
- EMPIAR [302]
- SCOP2 [28]
- CATH [26]
- EMDB [24]