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PDBe
Filter By
Current Database
- EMDB [42440]
Current status
- REL [42440]
Sample type
- Protein [35160]
- Complex [35010]
- Ligand [20650]
- RNA [4328]
- DNA [3262]
- Sample [2678]
- Virus [2210]
- Cellular component [2172]
- Cell [1479]
- Tissue [304]
- Other [92]
- Em label [2]
Organism
- Homo sapiens [18139]
- Mus musculus [3105]
- Synthetic construct [2907]
- Escherichia coli [2456]
- Saccharomyces cerevisiae [2119]
- Severe acute respiratory syndrome coronavirus [2011]
- Rattus norvegicus [1155]
- Escherichia coli [1007]
- Bos taurus [995]
- Oryctolagus cuniculus [837]
- Saccharomyces cerevisiae [771]
- Sus scrofa [697]
- Lama glama [663]
- Human immunodeficiency virus 1 [612]
- Xenopus laevis [548]
- Arabidopsis thaliana [507]
- Drosophila melanogaster [345]
- Chlamydomonas reinhardtii [264]
- Mycolicibacterium smegmatis [254]
- Mycoplasma pneumoniae [245]
- Gallus gallus [210]
- Vicugna pacos [182]
- Caenorhabditis elegans [173]
- Influenza a virus [166]
- Mycobacterium tuberculosis [163]
- Chaetomium thermophilum [162]
- Bacillus subtilis [159]
- Escherichia coli [157]
- Thermus thermophilus [144]
- Mycobacterium tuberculosis [139]
- Danio rerio [137]
- Staphylococcus aureus [133]
- Chaetomium thermophilum [133]
- Macaca mulatta [131]
- Ovis aries [123]
- Bacillus subtilis [119]
- Aequorea victoria [117]
- Enterobacteria phage t4 [115]
- Pseudomonas aeruginosa [115]
- Synechocystis sp. pcc 6803 [105]
- Plasmodium falciparum [97]
- Streptococcus pyogenes [87]
- Plasmodium falciparum [85]
- Salmonella enterica [82]
- Spinacia oleracea [77]
- Schizosaccharomyces pombe [77]
- Escherichia coli [76]
- Mycolicibacterium smegmatis [75]
- Pseudomonas aeruginosa [75]
- Escherichia virus t7 [73]
- Sus scrofa [73]
- Tetrahymena thermophila [70]
- Hepatitis b virus [67]
- Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [66]
- Pseudomonas phage phi6 [65]
- Thermus thermophilus [65]
- Cricetulus griseus [63]
- Schizosaccharomyces pombe [63]
- Severe acute respiratory syndrome coronavirus [62]
- Enterovirus d [61]
- Enterobacteria phage t4 [60]
- Dictyostelium discoideum [60]
- Canis lupus [60]
- Clostridioides difficile [59]
- Polytomella sp. pringsheim 198.80 [59]
- Trypanosoma brucei [58]
- Salmonella enterica [57]
- (no species) [56]
- Parengyodontium album [55]
- Amanita phalloides [54]
- Escherichia phage lambda [53]
- Neurospora crassa [53]
- Clostridium botulinum [52]
- Klebsiella pneumoniae [50]
- Human herpesvirus 1 [49]
- Middle east respiratory syndrome-related coronavirus [49]
- Dna molecule [48]
- Enterovirus a [47]
- Komagataella phaffii [47]
- Torpedo marmorata [47]
- Unidentified adenovirus [46]
- Human coronavirus hku1 [46]
- Saccharomyces cerevisiae [46]
- Staphylococcus phage 812 [45]
- Saccharomyces cerevisiae [44]
- Yarrowia lipolytica [44]
- Methanothermobacter marburgensis [43]
- Thermoplasma acidophilum [43]
- Shigella flexneri [43]
- Pyrococcus furiosus [41]
- Nipah virus [41]
- Legionella pneumophila [41]
- Equus caballus [41]
- Human herpesvirus 1 [40]
- Human cytomegalovirus [39]
- Potato virus y [39]
- Aquifex aeolicus [38]
- Thermotoga maritima [37]
- Chikungunya virus [37]
- (no species) [36]
EM Method
- Single-particle [36995]
- Helical reconstruction [2130]
- Subtomogram averaging [2114]
- Tomography [1056]
- Electron Crystallography [145]
Resolution
- < 2Å [365]
- ≥ 2Å and < 3Å [10211]
- ≥ 3Å and < 4Å [18963]
- ≥ 4Å and < 5Å [4148]
- ≥ 5Å and < 6Å [903]
- ≥ 6Å and < 8Å [1799]
- ≥ 8Å and < 12Å [1660]
- ≥ 12Å and < 16Å [683]
- ≥ 16Å and < 20Å [588]
- ≥ 20Å and < 30Å [1181]
- ≥ 30Å [819]
Model molecular weight
- 0-50 kDa [676]
- 50-100 kDa [2099]
- 100-250 kDa [10022]
- 250-500 kDa [8112]
- 500-1000 kDa [4727]
- 1-2 MDa [2193]
- 2-5 MDa [2181]
- 5-10 MDa [577]
- > 10 MDa [321]
Release Date
- 2026 [6045]
- 2025 [7612]
- 2024 [6561]
- 2023 [5215]
- 2022 [4510]
- 2021 [3357]
- 2020 [2664]
- 2019 [1579]
- 2018 [1032]
- 2017 [770]
- 2016 [752]
- 2015 [425]
- 2014 [398]
- 2013 [318]
- 2012 [285]
- 2011 [178]
- 2010 [136]
- 2009 [152]
- 2008 [60]
- 2007 [134]
- 2006 [126]
- 2005 [45]
- 2004 [34]
- 2003 [44]
- 2002 [8]
Author by name
- Zhang Y [1369]
- Wang Y [1322]
- Zhang X [1080]
- Wang X [991]
- Li Y [931]
- Wang J [867]
- Li X [775]
- Zhang Z [765]
- Liu Y [719]
- Li J [672]
- Gao Y [659]
- Li Z [648]
- Zhang J [639]
- Wang L [636]
- Li S [620]
- Zhang L [575]
- Beckmann R [559]
- Chen Y [544]
- Chen X [543]
- Li H [538]
- Liu C [525]
- Wang Q [519]
- Wang H [510]
- Liu S [489]
- Li D [478]
- Liu J [477]
- Xu Y [462]
- Liu X [452]
- Wang C [451]
- Zhang H [449]
- Liu Z [448]
- Chen Z [443]
- Zhang S [441]
- Kotecha A [440]
- Ward AB [434]
- Zhu Y [433]
- Chen J [421]
- Xu J [420]
- Liu L [419]
- Jiang Y [417]
- Shi Y [413]
- Cheng J [401]
- Cramer P [398]
- Wang Z [397]
- Zhang P [397]
- Zhang K [393]
- Berninghausen O [386]
- Wang S [383]
- Zhao J [380]
- Mahamid J [371]
- Zhao Y [366]
- Yang Y [365]
- Wang W [358]
- Xu HE [355]
- Scheres SHW [349]
- Li W [341]
- Chen L [340]
- Zhang C [334]
- Zhou Y [334]
- Zhang B [331]
- Yang X [324]
- Zhang W [321]
- Pilhofer M [317]
- Liu B [315]
- Baumeister W [313]
- Xu C [308]
- Wang M [303]
- Beck M [301]
- Yang W [300]
- Yu X [298]
- Liu H [297]
- Huang Y [294]
- Wang P [294]
- Li M [291]
- Yang H [291]
- Skiniotis G [287]
- Zhao X [286]
- Zhou Q [286]
- Zhang M [280]
- Wu J [279]
- Rao Z [278]
- Zhu X [274]
- Chen Q [272]
- Lu Y [268]
- Wu Y [268]
- Cheng Y [266]
- Huang J [266]
- Yang J [264]
- Plevka P [262]
- Sun L [259]
- Sun Y [257]
- Raunser S [256]
- Zhou J [255]
- Chen H [253]
- Huang X [253]
- Yuan Q [253]
- Briggs JAG [248]
- Kwong PD [247]
- Schulman BA [247]
- Kobilka BK [246]
Author by ORCID
- Beckmann R [272]
- Zhang P [188]
- Kobilka BK [164]
- Ward AB [159]
- Denk T [151]
- Beck M [151]
- Gmeiner P [147]
- Kotecha A [147]
- Raunser S [144]
- Pilhofer M [144]
- Xu HE [142]
- Skiniotis G [142]
- Hurt E [136]
- Plevka P [133]
- Rubinstein JL [129]
- Cheng J [129]
- Welsch S [127]
- Gao Y [127]
- Murphy BJ [126]
- Hummer G [124]
- He F [123]
- Hilger D [121]
- Papasergi-scott MM [121]
- Nureki O [120]
- Rappsilber J [119]
- Batebi H [119]
- Panova O [119]
- Perez-hernandez G [119]
- Hildebrand PW [119]
- Kuhlbrandt W [118]
- Mahamid J [117]
- Scheres SHW [116]
- Fuzik T [114]
- Spahn CMT [111]
- Hirst J [106]
- Sobolevsky AI [105]
- Xu J [103]
- Rao Z [102]
- Amunts A [102]
- Gao GF [101]
- Novacek J [100]
- Lander GC [98]
- Ranson NA [95]
- Berninghausen O [94]
- Plaschka C [91]
- Carter AP [90]
- Li H [90]
- Baumeister W [90]
- Stahlberg H [90]
- Turonova B [90]
- Dominguez R [89]
- Wang X [85]
- Cong Y [84]
- Wilson DN [84]
- Briggs JAG [84]
- Flemming D [83]
- Grange M [82]
- Blaza JN [81]
- Bridges HR [81]
- Sachse C [81]
- Schulman BA [81]
- Khusainov I [80]
- Yang M [80]
- Klusch N [80]
- Kwong PD [80]
- Xu Y [79]
- Weixlbaumer A [79]
- Steyaert J [79]
- Zhang K [78]
- Mielke T [78]
- Chung I [78]
- Kato T [78]
- Dutzler R [75]
- Greber BJ [74]
- Robinson CV [73]
- Hardwick SW [72]
- Xiong X [72]
- Gouaux E [72]
- Hite RK [72]
- Phillips AW [71]
- Bottcher B [71]
- Cheng Y [70]
- Zhou ZH [70]
- Sun JP [70]
- Aricescu AR [70]
- Thoms M [69]
- Sun L [69]
- Wang Y [69]
- Yamashita K [69]
- Ozorowski G [69]
- Pardon E [68]
- Yin Z [68]
- Bashan A [68]
- Cusack S [68]
- Larsson DSD [67]
- Mclaughlin SH [67]
- Lee SY [67]
- Rosenthal PB [66]
- Haynes BF [66]
- Pollak MN [66]
Journal
- NAT COMMUN [8287]
- NATURE [3771]
- TO BE PUBLISHED [3729]
- NAT STRUCT MOL BIOL [2579]
- PNAS [2498]
- BIORXIV [2042]
- SCIENCE [1953]
- CELL [1762]
- SCI ADV [1600]
- MOL CELL [1567]
- ELIFE [1307]
- STRUCTURE [1024]
- CELL REP [848]
- NUCLEIC ACIDS RES [841]
- EMBO J [666]
- CELL RES [535]
- COMMUN BIOL [502]
- J MOL BIOL [436]
- J BIOL CHEM [414]
- ACTA CRYSTALLOGR D STRUCT BIOL [402]
- NAT CHEM BIOL [392]
- CELL DISCOV [379]
- J VIROL [347]
- NAT MICROBIOL [341]
- PLOS PATHOG [329]
- J STRUCT BIOL [223]
- EMBO REP [195]
- NAT METHODS [190]
- SCI REP [184]
- PLOS BIOL [177]
- NAT PLANTS [176]
- CELL HOST MICROBE [150]
- PROTEIN SCI [137]
- J CELL BIOL [128]
- J AM CHEM SOC [126]
- IMMUNITY [114]
- MBIO [113]
- PROTEIN CELL [104]
- NEURON [101]
- J MED CHEM [87]
- PLOS ONE [86]
- DEV CELL [83]
- LIFE SCI ALLIANCE [82]
- ISCIENCE [81]
- IUCRJ [81]
- INT J MOL SCI [78]
- RES SQ [73]
- ADV SCI [71]
- COMMUN CHEM [63]
- NPJ VACCINES [62]
- J STRUCT BIOL X [59]
- VIRUSES [56]
- ACTA NEUROPATHOL [54]
- BLOOD [53]
- ACS NANO [51]
- NAT CELL BIOL [50]
- FEBS J [49]
- PNAS NEXUS [47]
- SIGNAL TRANSDUCT TARGET THER [46]
- BIOCHEM BIOPHYS RES COMMUN [44]
- SCI TRANSL MED [42]
- FEBS LETT [40]
- BIOMOLECULES [39]
- CURR BIOL [39]
- ANGEW CHEM INT ED ENGL [38]
- SCI IMMUNOL [37]
- FRONT MOL BIOSCI [35]
- ISME J [35]
- J CELL SCI [35]
- NAT CATAL [34]
- PLANT COMMUN. [34]
- GENES DEV [32]
- BIOCHEMISTRY [31]
- BIOCHEM J [30]
- INT J BIOL MACROMOL [30]
- VITA [29]
- J EXP MED [27]
- MOL MICROBIOL [27]
- MOL PLANT [27]
- NAT NEUROSCI [27]
- ULTRAMICROSCOPY [27]
- VIROLOGY [27]
- CELL REP MED [26]
- RNA [26]
- ACTA PHARMACOL.SIN. [25]
- J GEN VIROL [25]
- NATL SCI REV [25]
- SCI SIGNAL [25]
- NAT NANOTECHNOL [24]
- J.MOL.CELL.CARDIOL. [23]
- NAT CHEM [23]
- OPEN BIOL [23]
- EMERG MICROBES INFECT [22]
- PLANT CELL [22]
- FRONT MICROBIOL [21]
- NAT MATER [21]
- ACS CHEM BIOL [20]
- BIOCHIM BIOPHYS ACTA BIOENERG [20]
- FRONT IMMUNOL [20]
- J BACTERIOL [20]
Software
- CRYOSPARC [12232]
- RELION [11180]
- CTFFIND [2054]
- GCTF [1060]
- IMOD [756]
- WARP [687]
- SPIDER [379]
- CISTEM [346]
- CHIMERA [338]
- PHENIX [328]
- COOT [298]
- FREALIGN [285]
- DYNAMO [238]
- UCSF CHIMERAX [223]
- EMAN [215]
- M [184]
- PYTOM [164]
- UCSF CHIMERA [162]
- EMAN2 [157]
- PEET [146]
- IMAGIC [131]
- CRYOLO [129]
- SPHIRE [108]
- XMIPP [107]
- MATLAB [86]
- AV3 [83]
- EMCLARITY [69]
- CTFPHASEFLIP [68]
- NOVACTF [66]
- TOM TOOLBOX [65]
- NOVASTA [62]
- ETOMO [60]
- STOPGAP [56]
- AUTO3DEM [52]
- JSPR [52]
- TOM [49]
- SITUS [47]
- MRC [46]
- AIMLESS [44]
- ISOLDE [41]
- SPARX [40]
- URO [40]
- IMAGIC, SPIDER [37]
- SIMPLE [37]
- SPIDER, FREALIGN [34]
- APPION, SPIDER [32]
- PROTOMO [32]
- CTFFIND3, RELION [30]
- SPRING [29]
- EMAN2, SPARX [27]
- IHRSR [27]
- BSOFT [26]
- MDFF [26]
- PRIISM/IVE [23]
- SUBTOM [23]
- EMAN1 [22]
- SCIPION [22]
- SPIDER, APPION [22]
- J3DR [21]
- O [21]
- FREALIX [20]
- IMOD, BSOFT, SPIDER, TOM, PACKAGE, MATLAB [20]
- ARETOMO [19]
- JALIGN [19]
- MOTIONCORR2 [19]
- IMOD, TOMO3D, PEET [18]
- MOLREP [18]
- SERIALEM [18]
- TOMO3D [18]
- CHIMERA, MDFF [17]
- CRYODRGN [17]
- SPIDER, IMAGIC [17]
- CHIMERA, COOT [16]
- CHIMERA, SITUS [16]
- EM3DR2 [16]
- EMFIT [16]
- IMAGIC, CUSTOM, SPIDER [16]
- MULTI-PATH SA [16]
- POINTLESS [16]
- APPION, SPIDER, EMAN [15]
- EMAN2, RELION [15]
- IMOD, DYNAMO [15]
- SPIDER, RELION [15]
- UNBLUR, CTFFIND4, FREALIGN [15]
- CHIMERA, FLEX-EM [14]
- COMET [14]
- IMAGIC-5 [14]
- IPET, FETR, SPIDER, IMOD, EMAN, AND, EMAN2 [14]
- TOPAZ [14]
- EMREADY [13]
- IMAGIC-5, SPIDER [13]
- PHOELIX, SUPRIM [13]
- REFMAC [13]
- AMIRA [12]
- CTFFIND4 [12]
- DIREX [12]
- EMAN1, EMAN2 [12]
- IMIRS [12]
- PHASER [12]
- EMAN2, SPIDER, XMIPP [11]
Microscope
- FEI TITAN KRIOS [22379]
- TFS KRIOS [11329]
- FEI TALOS ARCTICA [1968]
- TFS GLACIOS [1519]
- FEI POLARA 300 [940]
- FEI TECNAI F20 [932]
- JEOL CRYO ARM 300 [525]
- FEI TECNAI F30 [403]
- FEI TITAN [338]
- FEI TECNAI ARCTICA [269]
- FEI TECNAI 20 [218]
- FEI/PHILIPS CM200FEG [215]
- FEI TECNAI 12 [159]
- JEOL 3200FSC [134]
- TFS TALOS [126]
- FEI TECNAI SPIRIT [124]
- FEI/PHILIPS CM300FEG/T [90]
- JEOL 2200FS [84]
- JEOL CRYO ARM 200 [64]
- JEOL 2010F [60]
- JEOL 1230 [39]
- JEOL 2100 [36]
- FEI/PHILIPS CM120T [34]
- FEI MORGAGNI [32]
- JEOL 3200FS [32]
- JEOL 2100F [31]
- JEOL 1400 [28]
- FEI/PHILIPS CM200FEG/ST [26]
- FEI/PHILIPS CM200T [24]
- TFS TITAN THEMIS [24]
- JEOL KYOTO-3000SFF [22]
- TFS TALOS L120C [22]
- JEOL 1200EXII [21]
- TFS TUNDRA [21]
- JEOL 3000SFF [17]
- JEOL 4000 [17]
- OTHER [17]
- ZEISS LIBRA120PLUS [16]
- FEI TECNAI 10 [14]
- JEOL 2200FSC [14]
- TFS TALOS F200C [13]
- JEOL 1200EX [11]
- JEOL 1400/HR YPS FEG [11]
- FEI/PHILIPS CM200FEG/UT [10]
- FEI/PHILIPS CM12 [8]
- FEI/PHILIPS CM300FEG/HE [7]
- FEI/PHILIPS CM300FEG/ST [6]
- FEI/PHILIPS EM420 [6]
- JEOL 2000EX [6]
- JEOL 4000EX [6]
- JEOL 100CX [5]
- FEI TECNAI SPHERA [4]
- JEOL 1200 [3]
- JEOL 3100FFC [3]
- FEI/PHILIPS EM400 [2]
- HITACHI H-9500SD [2]
- JEOL 1010 [2]
- JEOL 2010 [2]
- JEOL 2010HC [2]
- JEOL 2010HT [2]
- JEOL 2010UHR [2]
- FEI/PHILIPS CM10 [1]
- FEI/PHILIPS CM200FEG/SOPHIE [1]
- HITACHI EF2000 [1]
- HITACHI H7600 [1]
- JEOL 2000EXII [1]
- JEOL 2011 [1]
- SHUIMU TOTEM 300S [1]
- ZEISS LEO912 [1]
Electron Source
- FIELD EMISSION GUN [41465]
- LAB6 [515]
- OTHER [293]
- TUNGSTEN HAIRPIN [168]
Film or detector model
- GATAN K3 6K X 4K [10811]
- GATAN K3 BIOQUANTUM 6K X 4K [8476]
- GATAN K2 SUMMIT 4K X 4K [8140]
- FEI FALCON IV 4K X 4K [4681]
- FEI FALCON III 4K X 4K [2585]
- GATAN K2 QUANTUM 4K X 4K [1573]
- TFS FALCON 4I 4K X 4K [1262]
- FEI FALCON II 4K X 4K [1149]
- KODAK SO-163 FILM [801]
- GATAN K3 BIOCONTINUUM 6K X 4K [600]
- GATAN ULTRASCAN 4000 4K X 4K [493]
- TVIPS TEMCAM-F416 4K X 4K [292]
- OTHER [194]
- GATAN K2 BASE 4K X 4K [179]
- GATAN K2 4K X 4K [160]
- FEI EAGLE 4K X 4K [155]
- TVIPS TEMCAM-F415 4K X 4K [82]
- FEI CETA 4K X 4K [77]
- GENERIC GATAN 4K X 4K [77]
- FEI FALCON I 4K X 4K [64]
- GATAN ULTRASCAN 1000 2K X 2K [63]
- GENERIC CCD [61]
- GENERIC TVIPS 4K X 4K [60]
- GATAN MULTISCAN [38]
- DIRECT ELECTRON DE-20 5K X 3K [37]
- TVIPS TEMCAM-F224 2K X 2K [33]
- TVIPS TEMCAM-F816 8K X 8K [33]
- FEI EAGLE 2K X 2K [32]
- GATAN K2 IS 4K X 4K [27]
- GENERIC GATAN [27]
- DIRECT ELECTRON APOLLO 4K X 4K [24]
- DIRECT ELECTRON DE-64 8K X 8K [24]
- DIRECT ELECTRON DE-10 5K X 4K [16]
- DIRECT ELECTRON DE-16 4K X 4K [15]
- GENERIC GATAN 2K X 2K [13]
- DECTRIS SINGLA 1K X 1K [12]
- KODAK 4489 FILM [11]
- GENERIC CCD 2K X 2K [10]
- GENERIC TVIPS [10]
- AGFA SCIENTA FILM [9]
- GATAN ORIUS SC1000 4K X 2.7K [7]
- GATAN ORIUS SC200 2K X 2K [7]
- GENERIC FILM [7]
- TVIPS TEMCAM-F216 2K X 2K [7]
- DECTRIS ELA 1K X 0.5K [6]
- DIRECT ELECTRON DE-12 4K X 3K [6]
- DECTRIS ARINA 0.2K X 0.2K [5]
- GATAN ULTRASCAN 10000 10K X 10K [4]
- GENERIC TVIPS 2K X 2K [3]
- SIA 15C 3K X 3K [2]
- GATAN ORIUS SC600 2.7K X 2.7K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- UniProt [33313]
- PDBe-Kb [31715]
- PDB [31069]
- AlphaFold DB [30724]
- InterPro [25993]
- Gene Ontology [25859]
- Pfam [24677]
- ChEBI [19220]
- ChEMBL [17607]
- DrugBank [15556]
- Complex Portal [10335]
- EMPIAR [4367]
- SCOP2 [603]
- CATH [419]
CryoEM
Q-score:
0.66
Similar entry percentile: 98%
Similar entry percentile: 98%
Ashworth M, Bayfield OW, Noble OW, Plevin MJ, Antson AA
To Be Published
Consensus map
CryoEM
Release date: Oct. 7, 2026
Resolution: 3.65 Å
EM Method: Single-particle
Resolution: 3.65 Å
EM Method: Single-particle
Manger S, Keles I, Frangakis AS, Scheffer MP, Mantanya MS
To Be Published
Focused map
CryoEM
Release date: Oct. 7, 2026
Resolution: 4.07 Å
EM Method: Single-particle
Resolution: 4.07 Å
EM Method: Single-particle
Manger S, Keles I, Frangakis AS, Scheffer MP, Mantanya MS
To Be Published
CryoEM
Release date: Oct. 7, 2026
Resolution: 6.76 Å
EM Method: Helical reconstruction
Resolution: 6.76 Å
EM Method: Helical reconstruction
Inayathulla M, Tomas M
To Be Published
CryoEM
Q-score:
0.371
Similar entry percentile: 35%
Similar entry percentile: 35%
Manger S, Keles I, Frangakis AS, Scheffer MP, Mantanya MS
To Be Published
Composite map
CryoEM
Q-score:
0.347
Similar entry percentile: 22%
Similar entry percentile: 22%
Manger S, Keles I, Frangakis AS, Scheffer MP, Mantanya MS
To Be Published
Consensus map
CryoEM
Release date: Oct. 7, 2026
Resolution: 2.1 Å
EM Method: Single-particle
Resolution: 2.1 Å
EM Method: Single-particle
Rajan KS, Yonath A
To Be Published
CryoEM
Focused map
Release date: Oct. 7, 2026
Resolution: 2.1 Å
EM Method: Single-particle
Resolution: 2.1 Å
EM Method: Single-particle
Rajan KS, Yonath A
To Be Published
Composite map
CryoEM
Q-score:
0.711
Similar entry percentile: 90%
Similar entry percentile: 90%
Rajan KS, Yonath A
To Be Published
CryoEM
Q-score:
0.278
Similar entry percentile: 12%
Similar entry percentile: 12%
Bloyet LM, Whelan SPJ
To Be Published
Filter By
Current Database
- EMDB [42440]
Current status
- REL [42440]
Sample type
- Protein [35160]
- Complex [35010]
- Ligand [20650]
- RNA [4328]
- DNA [3262]
- Sample [2678]
- Virus [2210]
- Cellular component [2172]
- Cell [1479]
- Tissue [304]
- Other [92]
- Em label [2]
Organism
- Homo sapiens [18139]
- Mus musculus [3105]
- Synthetic construct [2907]
- Escherichia coli [2456]
- Saccharomyces cerevisiae [2119]
- Severe acute respiratory syndrome coronavirus [2011]
- Rattus norvegicus [1155]
- Escherichia coli [1007]
- Bos taurus [995]
- Oryctolagus cuniculus [837]
- Saccharomyces cerevisiae [771]
- Sus scrofa [697]
- Lama glama [663]
- Human immunodeficiency virus 1 [612]
- Xenopus laevis [548]
- Arabidopsis thaliana [507]
- Drosophila melanogaster [345]
- Chlamydomonas reinhardtii [264]
- Mycolicibacterium smegmatis [254]
- Mycoplasma pneumoniae [245]
- Gallus gallus [210]
- Vicugna pacos [182]
- Caenorhabditis elegans [173]
- Influenza a virus [166]
- Mycobacterium tuberculosis [163]
- Chaetomium thermophilum [162]
- Bacillus subtilis [159]
- Escherichia coli [157]
- Thermus thermophilus [144]
- Mycobacterium tuberculosis [139]
- Danio rerio [137]
- Staphylococcus aureus [133]
- Chaetomium thermophilum [133]
- Macaca mulatta [131]
- Ovis aries [123]
- Bacillus subtilis [119]
- Aequorea victoria [117]
- Enterobacteria phage t4 [115]
- Pseudomonas aeruginosa [115]
- Synechocystis sp. pcc 6803 [105]
- Plasmodium falciparum [97]
- Streptococcus pyogenes [87]
- Plasmodium falciparum [85]
- Salmonella enterica [82]
- Spinacia oleracea [77]
- Schizosaccharomyces pombe [77]
- Escherichia coli [76]
- Mycolicibacterium smegmatis [75]
- Pseudomonas aeruginosa [75]
- Escherichia virus t7 [73]
- Sus scrofa [73]
- Tetrahymena thermophila [70]
- Hepatitis b virus [67]
- Nostoc sp. (strain pcc 7120 / sag 25.82 / utex 2576) [66]
- Pseudomonas phage phi6 [65]
- Thermus thermophilus [65]
- Cricetulus griseus [63]
- Schizosaccharomyces pombe [63]
- Severe acute respiratory syndrome coronavirus [62]
- Enterovirus d [61]
- Enterobacteria phage t4 [60]
- Dictyostelium discoideum [60]
- Canis lupus [60]
- Clostridioides difficile [59]
- Polytomella sp. pringsheim 198.80 [59]
- Trypanosoma brucei [58]
- Salmonella enterica [57]
- (no species) [56]
- Parengyodontium album [55]
- Amanita phalloides [54]
- Escherichia phage lambda [53]
- Neurospora crassa [53]
- Clostridium botulinum [52]
- Klebsiella pneumoniae [50]
- Human herpesvirus 1 [49]
- Middle east respiratory syndrome-related coronavirus [49]
- Dna molecule [48]
- Enterovirus a [47]
- Komagataella phaffii [47]
- Torpedo marmorata [47]
- Unidentified adenovirus [46]
- Human coronavirus hku1 [46]
- Saccharomyces cerevisiae [46]
- Staphylococcus phage 812 [45]
- Saccharomyces cerevisiae [44]
- Yarrowia lipolytica [44]
- Methanothermobacter marburgensis [43]
- Thermoplasma acidophilum [43]
- Shigella flexneri [43]
- Pyrococcus furiosus [41]
- Nipah virus [41]
- Legionella pneumophila [41]
- Equus caballus [41]
- Human herpesvirus 1 [40]
- Human cytomegalovirus [39]
- Potato virus y [39]
- Aquifex aeolicus [38]
- Thermotoga maritima [37]
- Chikungunya virus [37]
- (no species) [36]
EM Method
- Single-particle [36995]
- Helical reconstruction [2130]
- Subtomogram averaging [2114]
- Tomography [1056]
- Electron Crystallography [145]
Resolution
- < 2Å [365]
- ≥ 2Å and < 3Å [10211]
- ≥ 3Å and < 4Å [18963]
- ≥ 4Å and < 5Å [4148]
- ≥ 5Å and < 6Å [903]
- ≥ 6Å and < 8Å [1799]
- ≥ 8Å and < 12Å [1660]
- ≥ 12Å and < 16Å [683]
- ≥ 16Å and < 20Å [588]
- ≥ 20Å and < 30Å [1181]
- ≥ 30Å [819]
Model molecular weight
- 0-50 kDa [676]
- 50-100 kDa [2099]
- 100-250 kDa [10022]
- 250-500 kDa [8112]
- 500-1000 kDa [4727]
- 1-2 MDa [2193]
- 2-5 MDa [2181]
- 5-10 MDa [577]
- > 10 MDa [321]
Release Date
- 2026 [6045]
- 2025 [7612]
- 2024 [6561]
- 2023 [5215]
- 2022 [4510]
- 2021 [3357]
- 2020 [2664]
- 2019 [1579]
- 2018 [1032]
- 2017 [770]
- 2016 [752]
- 2015 [425]
- 2014 [398]
- 2013 [318]
- 2012 [285]
- 2011 [178]
- 2010 [136]
- 2009 [152]
- 2008 [60]
- 2007 [134]
- 2006 [126]
- 2005 [45]
- 2004 [34]
- 2003 [44]
- 2002 [8]
Author by name
- Zhang Y [1369]
- Wang Y [1322]
- Zhang X [1080]
- Wang X [991]
- Li Y [931]
- Wang J [867]
- Li X [775]
- Zhang Z [765]
- Liu Y [719]
- Li J [672]
- Gao Y [659]
- Li Z [648]
- Zhang J [639]
- Wang L [636]
- Li S [620]
- Zhang L [575]
- Beckmann R [559]
- Chen Y [544]
- Chen X [543]
- Li H [538]
- Liu C [525]
- Wang Q [519]
- Wang H [510]
- Liu S [489]
- Li D [478]
- Liu J [477]
- Xu Y [462]
- Liu X [452]
- Wang C [451]
- Zhang H [449]
- Liu Z [448]
- Chen Z [443]
- Zhang S [441]
- Kotecha A [440]
- Ward AB [434]
- Zhu Y [433]
- Chen J [421]
- Xu J [420]
- Liu L [419]
- Jiang Y [417]
- Shi Y [413]
- Cheng J [401]
- Cramer P [398]
- Wang Z [397]
- Zhang P [397]
- Zhang K [393]
- Berninghausen O [386]
- Wang S [383]
- Zhao J [380]
- Mahamid J [371]
- Zhao Y [366]
- Yang Y [365]
- Wang W [358]
- Xu HE [355]
- Scheres SHW [349]
- Li W [341]
- Chen L [340]
- Zhang C [334]
- Zhou Y [334]
- Zhang B [331]
- Yang X [324]
- Zhang W [321]
- Pilhofer M [317]
- Liu B [315]
- Baumeister W [313]
- Xu C [308]
- Wang M [303]
- Beck M [301]
- Yang W [300]
- Yu X [298]
- Liu H [297]
- Huang Y [294]
- Wang P [294]
- Li M [291]
- Yang H [291]
- Skiniotis G [287]
- Zhao X [286]
- Zhou Q [286]
- Zhang M [280]
- Wu J [279]
- Rao Z [278]
- Zhu X [274]
- Chen Q [272]
- Lu Y [268]
- Wu Y [268]
- Cheng Y [266]
- Huang J [266]
- Yang J [264]
- Plevka P [262]
- Sun L [259]
- Sun Y [257]
- Raunser S [256]
- Zhou J [255]
- Chen H [253]
- Huang X [253]
- Yuan Q [253]
- Briggs JAG [248]
- Kwong PD [247]
- Schulman BA [247]
- Kobilka BK [246]
Author by ORCID
- Beckmann R [272]
- Zhang P [188]
- Kobilka BK [164]
- Ward AB [159]
- Denk T [151]
- Beck M [151]
- Gmeiner P [147]
- Kotecha A [147]
- Raunser S [144]
- Pilhofer M [144]
- Xu HE [142]
- Skiniotis G [142]
- Hurt E [136]
- Plevka P [133]
- Rubinstein JL [129]
- Cheng J [129]
- Welsch S [127]
- Gao Y [127]
- Murphy BJ [126]
- Hummer G [124]
- He F [123]
- Hilger D [121]
- Papasergi-scott MM [121]
- Nureki O [120]
- Rappsilber J [119]
- Batebi H [119]
- Panova O [119]
- Perez-hernandez G [119]
- Hildebrand PW [119]
- Kuhlbrandt W [118]
- Mahamid J [117]
- Scheres SHW [116]
- Fuzik T [114]
- Spahn CMT [111]
- Hirst J [106]
- Sobolevsky AI [105]
- Xu J [103]
- Rao Z [102]
- Amunts A [102]
- Gao GF [101]
- Novacek J [100]
- Lander GC [98]
- Ranson NA [95]
- Berninghausen O [94]
- Plaschka C [91]
- Carter AP [90]
- Li H [90]
- Baumeister W [90]
- Stahlberg H [90]
- Turonova B [90]
- Dominguez R [89]
- Wang X [85]
- Cong Y [84]
- Wilson DN [84]
- Briggs JAG [84]
- Flemming D [83]
- Grange M [82]
- Blaza JN [81]
- Bridges HR [81]
- Sachse C [81]
- Schulman BA [81]
- Khusainov I [80]
- Yang M [80]
- Klusch N [80]
- Kwong PD [80]
- Xu Y [79]
- Weixlbaumer A [79]
- Steyaert J [79]
- Zhang K [78]
- Mielke T [78]
- Chung I [78]
- Kato T [78]
- Dutzler R [75]
- Greber BJ [74]
- Robinson CV [73]
- Hardwick SW [72]
- Xiong X [72]
- Gouaux E [72]
- Hite RK [72]
- Phillips AW [71]
- Bottcher B [71]
- Cheng Y [70]
- Zhou ZH [70]
- Sun JP [70]
- Aricescu AR [70]
- Thoms M [69]
- Sun L [69]
- Wang Y [69]
- Yamashita K [69]
- Ozorowski G [69]
- Pardon E [68]
- Yin Z [68]
- Bashan A [68]
- Cusack S [68]
- Larsson DSD [67]
- Mclaughlin SH [67]
- Lee SY [67]
- Rosenthal PB [66]
- Haynes BF [66]
- Pollak MN [66]
Journal
- NAT COMMUN [8287]
- NATURE [3771]
- TO BE PUBLISHED [3729]
- NAT STRUCT MOL BIOL [2579]
- PNAS [2498]
- BIORXIV [2042]
- SCIENCE [1953]
- CELL [1762]
- SCI ADV [1600]
- MOL CELL [1567]
- ELIFE [1307]
- STRUCTURE [1024]
- CELL REP [848]
- NUCLEIC ACIDS RES [841]
- EMBO J [666]
- CELL RES [535]
- COMMUN BIOL [502]
- J MOL BIOL [436]
- J BIOL CHEM [414]
- ACTA CRYSTALLOGR D STRUCT BIOL [402]
- NAT CHEM BIOL [392]
- CELL DISCOV [379]
- J VIROL [347]
- NAT MICROBIOL [341]
- PLOS PATHOG [329]
- J STRUCT BIOL [223]
- EMBO REP [195]
- NAT METHODS [190]
- SCI REP [184]
- PLOS BIOL [177]
- NAT PLANTS [176]
- CELL HOST MICROBE [150]
- PROTEIN SCI [137]
- J CELL BIOL [128]
- J AM CHEM SOC [126]
- IMMUNITY [114]
- MBIO [113]
- PROTEIN CELL [104]
- NEURON [101]
- J MED CHEM [87]
- PLOS ONE [86]
- DEV CELL [83]
- LIFE SCI ALLIANCE [82]
- ISCIENCE [81]
- IUCRJ [81]
- INT J MOL SCI [78]
- RES SQ [73]
- ADV SCI [71]
- COMMUN CHEM [63]
- NPJ VACCINES [62]
- J STRUCT BIOL X [59]
- VIRUSES [56]
- ACTA NEUROPATHOL [54]
- BLOOD [53]
- ACS NANO [51]
- NAT CELL BIOL [50]
- FEBS J [49]
- PNAS NEXUS [47]
- SIGNAL TRANSDUCT TARGET THER [46]
- BIOCHEM BIOPHYS RES COMMUN [44]
- SCI TRANSL MED [42]
- FEBS LETT [40]
- BIOMOLECULES [39]
- CURR BIOL [39]
- ANGEW CHEM INT ED ENGL [38]
- SCI IMMUNOL [37]
- FRONT MOL BIOSCI [35]
- ISME J [35]
- J CELL SCI [35]
- NAT CATAL [34]
- PLANT COMMUN. [34]
- GENES DEV [32]
- BIOCHEMISTRY [31]
- BIOCHEM J [30]
- INT J BIOL MACROMOL [30]
- VITA [29]
- J EXP MED [27]
- MOL MICROBIOL [27]
- MOL PLANT [27]
- NAT NEUROSCI [27]
- ULTRAMICROSCOPY [27]
- VIROLOGY [27]
- CELL REP MED [26]
- RNA [26]
- ACTA PHARMACOL.SIN. [25]
- J GEN VIROL [25]
- NATL SCI REV [25]
- SCI SIGNAL [25]
- NAT NANOTECHNOL [24]
- J.MOL.CELL.CARDIOL. [23]
- NAT CHEM [23]
- OPEN BIOL [23]
- EMERG MICROBES INFECT [22]
- PLANT CELL [22]
- FRONT MICROBIOL [21]
- NAT MATER [21]
- ACS CHEM BIOL [20]
- BIOCHIM BIOPHYS ACTA BIOENERG [20]
- FRONT IMMUNOL [20]
- J BACTERIOL [20]
Software
- CRYOSPARC [12232]
- RELION [11180]
- CTFFIND [2054]
- GCTF [1060]
- IMOD [756]
- WARP [687]
- SPIDER [379]
- CISTEM [346]
- CHIMERA [338]
- PHENIX [328]
- COOT [298]
- FREALIGN [285]
- DYNAMO [238]
- UCSF CHIMERAX [223]
- EMAN [215]
- M [184]
- PYTOM [164]
- UCSF CHIMERA [162]
- EMAN2 [157]
- PEET [146]
- IMAGIC [131]
- CRYOLO [129]
- SPHIRE [108]
- XMIPP [107]
- MATLAB [86]
- AV3 [83]
- EMCLARITY [69]
- CTFPHASEFLIP [68]
- NOVACTF [66]
- TOM TOOLBOX [65]
- NOVASTA [62]
- ETOMO [60]
- STOPGAP [56]
- AUTO3DEM [52]
- JSPR [52]
- TOM [49]
- SITUS [47]
- MRC [46]
- AIMLESS [44]
- ISOLDE [41]
- SPARX [40]
- URO [40]
- IMAGIC, SPIDER [37]
- SIMPLE [37]
- SPIDER, FREALIGN [34]
- APPION, SPIDER [32]
- PROTOMO [32]
- CTFFIND3, RELION [30]
- SPRING [29]
- EMAN2, SPARX [27]
- IHRSR [27]
- BSOFT [26]
- MDFF [26]
- PRIISM/IVE [23]
- SUBTOM [23]
- EMAN1 [22]
- SCIPION [22]
- SPIDER, APPION [22]
- J3DR [21]
- O [21]
- FREALIX [20]
- IMOD, BSOFT, SPIDER, TOM, PACKAGE, MATLAB [20]
- ARETOMO [19]
- JALIGN [19]
- MOTIONCORR2 [19]
- IMOD, TOMO3D, PEET [18]
- MOLREP [18]
- SERIALEM [18]
- TOMO3D [18]
- CHIMERA, MDFF [17]
- CRYODRGN [17]
- SPIDER, IMAGIC [17]
- CHIMERA, COOT [16]
- CHIMERA, SITUS [16]
- EM3DR2 [16]
- EMFIT [16]
- IMAGIC, CUSTOM, SPIDER [16]
- MULTI-PATH SA [16]
- POINTLESS [16]
- APPION, SPIDER, EMAN [15]
- EMAN2, RELION [15]
- IMOD, DYNAMO [15]
- SPIDER, RELION [15]
- UNBLUR, CTFFIND4, FREALIGN [15]
- CHIMERA, FLEX-EM [14]
- COMET [14]
- IMAGIC-5 [14]
- IPET, FETR, SPIDER, IMOD, EMAN, AND, EMAN2 [14]
- TOPAZ [14]
- EMREADY [13]
- IMAGIC-5, SPIDER [13]
- PHOELIX, SUPRIM [13]
- REFMAC [13]
- AMIRA [12]
- CTFFIND4 [12]
- DIREX [12]
- EMAN1, EMAN2 [12]
- IMIRS [12]
- PHASER [12]
- EMAN2, SPIDER, XMIPP [11]
Microscope
- FEI TITAN KRIOS [22379]
- TFS KRIOS [11329]
- FEI TALOS ARCTICA [1968]
- TFS GLACIOS [1519]
- FEI POLARA 300 [940]
- FEI TECNAI F20 [932]
- JEOL CRYO ARM 300 [525]
- FEI TECNAI F30 [403]
- FEI TITAN [338]
- FEI TECNAI ARCTICA [269]
- FEI TECNAI 20 [218]
- FEI/PHILIPS CM200FEG [215]
- FEI TECNAI 12 [159]
- JEOL 3200FSC [134]
- TFS TALOS [126]
- FEI TECNAI SPIRIT [124]
- FEI/PHILIPS CM300FEG/T [90]
- JEOL 2200FS [84]
- JEOL CRYO ARM 200 [64]
- JEOL 2010F [60]
- JEOL 1230 [39]
- JEOL 2100 [36]
- FEI/PHILIPS CM120T [34]
- FEI MORGAGNI [32]
- JEOL 3200FS [32]
- JEOL 2100F [31]
- JEOL 1400 [28]
- FEI/PHILIPS CM200FEG/ST [26]
- FEI/PHILIPS CM200T [24]
- TFS TITAN THEMIS [24]
- JEOL KYOTO-3000SFF [22]
- TFS TALOS L120C [22]
- JEOL 1200EXII [21]
- TFS TUNDRA [21]
- JEOL 3000SFF [17]
- JEOL 4000 [17]
- OTHER [17]
- ZEISS LIBRA120PLUS [16]
- FEI TECNAI 10 [14]
- JEOL 2200FSC [14]
- TFS TALOS F200C [13]
- JEOL 1200EX [11]
- JEOL 1400/HR YPS FEG [11]
- FEI/PHILIPS CM200FEG/UT [10]
- FEI/PHILIPS CM12 [8]
- FEI/PHILIPS CM300FEG/HE [7]
- FEI/PHILIPS CM300FEG/ST [6]
- FEI/PHILIPS EM420 [6]
- JEOL 2000EX [6]
- JEOL 4000EX [6]
- JEOL 100CX [5]
- FEI TECNAI SPHERA [4]
- JEOL 1200 [3]
- JEOL 3100FFC [3]
- FEI/PHILIPS EM400 [2]
- HITACHI H-9500SD [2]
- JEOL 1010 [2]
- JEOL 2010 [2]
- JEOL 2010HC [2]
- JEOL 2010HT [2]
- JEOL 2010UHR [2]
- FEI/PHILIPS CM10 [1]
- FEI/PHILIPS CM200FEG/SOPHIE [1]
- HITACHI EF2000 [1]
- HITACHI H7600 [1]
- JEOL 2000EXII [1]
- JEOL 2011 [1]
- SHUIMU TOTEM 300S [1]
- ZEISS LEO912 [1]
Electron Source
- FIELD EMISSION GUN [41465]
- LAB6 [515]
- OTHER [293]
- TUNGSTEN HAIRPIN [168]
Film or detector model
- GATAN K3 6K X 4K [10811]
- GATAN K3 BIOQUANTUM 6K X 4K [8476]
- GATAN K2 SUMMIT 4K X 4K [8140]
- FEI FALCON IV 4K X 4K [4681]
- FEI FALCON III 4K X 4K [2585]
- GATAN K2 QUANTUM 4K X 4K [1573]
- TFS FALCON 4I 4K X 4K [1262]
- FEI FALCON II 4K X 4K [1149]
- KODAK SO-163 FILM [801]
- GATAN K3 BIOCONTINUUM 6K X 4K [600]
- GATAN ULTRASCAN 4000 4K X 4K [493]
- TVIPS TEMCAM-F416 4K X 4K [292]
- OTHER [194]
- GATAN K2 BASE 4K X 4K [179]
- GATAN K2 4K X 4K [160]
- FEI EAGLE 4K X 4K [155]
- TVIPS TEMCAM-F415 4K X 4K [82]
- FEI CETA 4K X 4K [77]
- GENERIC GATAN 4K X 4K [77]
- FEI FALCON I 4K X 4K [64]
- GATAN ULTRASCAN 1000 2K X 2K [63]
- GENERIC CCD [61]
- GENERIC TVIPS 4K X 4K [60]
- GATAN MULTISCAN [38]
- DIRECT ELECTRON DE-20 5K X 3K [37]
- TVIPS TEMCAM-F224 2K X 2K [33]
- TVIPS TEMCAM-F816 8K X 8K [33]
- FEI EAGLE 2K X 2K [32]
- GATAN K2 IS 4K X 4K [27]
- GENERIC GATAN [27]
- DIRECT ELECTRON APOLLO 4K X 4K [24]
- DIRECT ELECTRON DE-64 8K X 8K [24]
- DIRECT ELECTRON DE-10 5K X 4K [16]
- DIRECT ELECTRON DE-16 4K X 4K [15]
- GENERIC GATAN 2K X 2K [13]
- DECTRIS SINGLA 1K X 1K [12]
- KODAK 4489 FILM [11]
- GENERIC CCD 2K X 2K [10]
- GENERIC TVIPS [10]
- AGFA SCIENTA FILM [9]
- GATAN ORIUS SC1000 4K X 2.7K [7]
- GATAN ORIUS SC200 2K X 2K [7]
- GENERIC FILM [7]
- TVIPS TEMCAM-F216 2K X 2K [7]
- DECTRIS ELA 1K X 0.5K [6]
- DIRECT ELECTRON DE-12 4K X 3K [6]
- DECTRIS ARINA 0.2K X 0.2K [5]
- GATAN ULTRASCAN 10000 10K X 10K [4]
- GENERIC TVIPS 2K X 2K [3]
- SIA 15C 3K X 3K [2]
- GATAN ORIUS SC600 2.7K X 2.7K [1]
- PROSCAN TEM-PIV 2K X 2K [1]
External links
- UniProt [33313]
- PDBe-Kb [31715]
- PDB [31069]
- AlphaFold DB [30724]
- InterPro [25993]
- Gene Ontology [25859]
- Pfam [24677]
- ChEBI [19220]
- ChEMBL [17607]
- DrugBank [15556]
- Complex Portal [10335]
- EMPIAR [4367]
- SCOP2 [603]
- CATH [419]