Filter By
Current Database
- EMDB [1877]
- EMPIAR [1]
Current status
- REL [1878]
Sample type
- Complex [1232]
- Protein [509]
- Sample [455]
- Cellular component [252]
- Virus [93]
- Ligand [40]
- DNA [25]
- Other [16]
- Cell [10]
- RNA [5]
- Tissue [2]
Organism
- Homo sapiens [539]
- Synthetic construct [234]
- Human immunodeficiency virus 1 [168]
- Bos taurus [146]
- Macaca mulatta [121]
- Enterobacteria phage m13 [114]
- Mus musculus [90]
- Severe acute respiratory syndrome coronavirus [72]
- Saccharomyces cerevisiae [69]
- Oryctolagus cuniculus [68]
- Influenza a virus [57]
- Escherichia coli [31]
- (no species) [30]
- Zaire ebolavirus [29]
- Human immunodeficiency virus [24]
- Rattus norvegicus [23]
- Rice dwarf virus [17]
- Escherichia coli [17]
- Plasmodium falciparum [15]
- Human mastadenovirus d [14]
- Betacoronavirus 1 [14]
- Simian-human immunodeficiency virus [14]
- Drosophila melanogaster [14]
- Macaca fascicularis [14]
- Porcine epidemic diarrhea virus [13]
- Sus scrofa [13]
- Severe acute respiratory syndrome coronavirus [11]
- Xenopus laevis [11]
- Sus scrofa [11]
- Epstein-barr virus (strain gd1) [10]
- Hepatitis b virus [10]
- Simian immunodeficiency virus [10]
- Ebola virus sp. [10]
- Human immunodeficiency virus 2 [9]
- Shigella flexneri [8]
- Aggregatibacter actinomycetemcomitans [8]
- Gallus gallus [8]
- Escherichia coli [7]
- Avian infectious bursal disease virus [6]
- Hepacivirus c [6]
- Alphainfluenzavirus influenzae [6]
- Alphapapillomavirus 9 [6]
- Human herpesvirus 8 [6]
- Severe acute respiratory syndrome coronavirus [6]
- (no species) [5]
- Unidentified influenza virus [5]
- Synechocystis sp. pcc 6803 [5]
- Alkalihalobacillus halodurans [5]
- Trypanosoma brucei [5]
- Phage gifsy-2 [4]
- Zaire ebolavirus [4]
- Archaeoglobus fulgidus [4]
- Enterovirus b [4]
- Unidentified adenovirus [3]
- Escherichia phage lambda [3]
- Middle east respiratory syndrome-related coronavirus [3]
- Desulfofustis sp. pb-srb1 [3]
- Tokyovirus a1 [3]
- Desulfacinum sp. [3]
- Thermotoga maritima [3]
- Lactococcus phage p2 [3]
- Thermus thermophilus [3]
- Pseudomonas aeruginosa [3]
- Human coronavirus hku1 [3]
- Photorhabdus luminescens [3]
- Lactococcus phage tuc2009 [3]
- Arabidopsis thaliana [3]
- Human coronavirus hku1 [3]
- Influenza b virus [3]
- Triatoma virus [2]
- Human cytomegalovirus [2]
- Canine mastadenovirus a [2]
- Mamastrovirus 1 [2]
- Hiv-1 vector pnl4-3 [2]
- (no species) [2]
- Sudan ebolavirus [2]
- Pseudomonas aeruginosa [2]
- Mycoplasma genitalium [2]
- Severe acute respiratory syndrome coronavirus [2]
- Synechococcus elongatus [2]
- Alphapapillomavirus 9 [2]
- Myxococcus xanthus [2]
- Plasmodium falciparum [2]
- Methanococcus maripaludis [2]
- Serratia entomophila [2]
- Pichia kudriavzevii [2]
- Neurospora crassa [2]
- Pyrococcus horikoshii [2]
- (no species) [2]
- Salimicrobium flavidum [2]
- Limulus polyphemus [2]
- (no species) [2]
- Magnetospirillum magneticum [2]
- Acidithiobacillus ferrooxidans [2]
- Ovis aries [2]
- Cricetulus griseus [1]
- (no species) [1]
- Cavia porcellus [1]
- Orf virus [1]
- Hepatitis b virus [1]
EM Method
- Single-particle [1265]
- Tomography [516]
- Subtomogram averaging [49]
- Helical reconstruction [41]
- Electron Crystallography [6]
Resolution
- < 2Å [3]
- ≥ 2Å and < 3Å [20]
- ≥ 3Å and < 4Å [19]
- ≥ 4Å and < 5Å [7]
- ≥ 5Å and < 6Å [1]
- ≥ 6Å and < 8Å [8]
- ≥ 8Å and < 12Å [65]
- ≥ 12Å and < 16Å [303]
- ≥ 16Å and < 20Å [276]
- ≥ 20Å and < 30Å [743]
- ≥ 30Å [373]
Model molecular weight
- 0-50 kDa [5]
- 50-100 kDa [8]
- 100-250 kDa [32]
- 250-500 kDa [23]
- 500-1000 kDa [11]
- 1-2 MDa [4]
- 2-5 MDa [2]
- 5-10 MDa [7]
- > 10 MDa [8]
Release Date
- 2026 [26]
- 2025 [157]
- 2024 [86]
- 2023 [102]
- 2022 [135]
- 2021 [72]
- 2020 [233]
- 2019 [173]
- 2018 [310]
- 2017 [61]
- 2016 [130]
- 2015 [71]
- 2014 [65]
- 2013 [52]
- 2012 [37]
- 2011 [36]
- 2010 [32]
- 2009 [19]
- 2008 [6]
- 2007 [39]
- 2006 [7]
- 2005 [8]
- 2004 [6]
- 2003 [15]
Author by name
- Ward AB [631]
- Ren G [484]
- Liu J [432]
- Burton DR [259]
- Lei D [233]
- Cottrell CA [203]
- Sewall LM [183]
- Turner HL [160]
- Rudenko G [156]
- Liu JF [151]
- White MA [151]
- Torres JL [150]
- Wilson IA [147]
- Misra A [130]
- Reddy S [130]
- Nogal B [121]
- Jackson AM [116]
- Su H [116]
- Castro C [115]
- Castro CE [115]
- Huang C [115]
- Huang CM [115]
- Marras A [115]
- Marras AE [115]
- Reddy MVVVS [115]
- Sok D [115]
- Su HJ [115]
- Zhou L [115]
- Han J [112]
- Ozorowski G [107]
- Zhao F [106]
- Bangaru S [105]
- Liu H [104]
- Sanders RW [99]
- Kanekiyo M [93]
- Zhang M [91]
- Lee WH [89]
- Hangartner L [87]
- Montefiori DC [87]
- Richey ST [86]
- Kirchdoerfer RN [83]
- Yang YR [83]
- Schief WR [82]
- Lei M [80]
- Marino JP [80]
- Bianchi M [79]
- Krammer F [78]
- Wu H [78]
- Hu Z [75]
- King NP [75]
- Crotty S [73]
- Wang S [72]
- Gang O [71]
- Irvine DJ [65]
- Gillespie RA [64]
- Wang Y [63]
- Antanasijevic A [62]
- Torrents De La Pena A [61]
- Copps J [60]
- Rodriguez AJ [60]
- Silvestri G [60]
- Zhang L [60]
- Carnathan DG [58]
- Haynes BF [56]
- De Val N [56]
- Yuan M [55]
- Van Gils Mj [54]
- Perrett HR [53]
- Bastidas R [52]
- Moore JP [51]
- Dosey A [50]
- Veesler D [50]
- Wiehe K [50]
- Baric RS [48]
- Schafer A [48]
- Ward A [48]
- Crispin M [47]
- Ellebedy AH [47]
- Schmitz AJ [47]
- Acharya P [45]
- Allen JD [45]
- Kwong PD [45]
- Saunders KO [45]
- Andrabi R [44]
- Mohanty S [44]
- Murin CD [44]
- Shaw AC [44]
- De Paiva Froes Rocha R [44]
- Alam SM [43]
- Berndsen ZT [43]
- Chiu W [43]
- Edwards RJ [43]
- Mansouri K [43]
- Moody MA [43]
- Graham BS [41]
- Saphire EO [41]
- Groschel B [40]
- Lu X [40]
- Parks R [40]
- Zhou T [40]
Author by ORCID
- Ren G [448]
- Liu J [322]
- Ward AB [260]
- Cottrell CA [203]
- Lei D [133]
- White MA [132]
- Torres JL [119]
- Zhou L [115]
- Castro CE [115]
- Marras AE [115]
- Su HJ [115]
- Kanekiyo M [90]
- Schief WR [82]
- Lei M [80]
- King NP [75]
- Ozorowski G [63]
- Burton DR [62]
- Carnathan DG [58]
- Bangaru S [57]
- Perrett HR [53]
- Yuan M [52]
- Krammer F [52]
- Lee WH [49]
- Crispin M [47]
- Crotty S [47]
- Schmitz AJ [47]
- Torrents De La Pena A [45]
- Allen JD [45]
- Wilson IA [41]
- Dosey A [40]
- Andrabi R [40]
- Chiu W [40]
- Edwards RJ [40]
- Yong P [39]
- Tse LV [37]
- Sanders RW [37]
- Irvine DJ [37]
- Kwong PD [37]
- Copps J [37]
- Hauser BM [36]
- De Paiva Froes Rocha R [36]
- Van Gils Mj [36]
- Mansouri K [35]
- Baker D [35]
- Zhou JQ [35]
- Brent RI [35]
- Turner JS [35]
- Alsoussi WB [35]
- Mcintire KM [35]
- Lei T [35]
- Tilahun K [35]
- Kleinstein SH [35]
- Antanasijevic A [33]
- Georgeson E [32]
- Jackson AM [32]
- Chopde A [32]
- Dye JM [31]
- Pallesen J [31]
- Zhang L [31]
- Zhou P [30]
- Chandran K [30]
- Rogers TF [29]
- Musharrafieh R [29]
- Safonova Y [29]
- Parren M [29]
- Sempowski GD [29]
- Beutler N [29]
- He WT [29]
- Song G [28]
- Crowe Jr Je [28]
- Zhao F [28]
- Callaghan S [28]
- Lee KK [27]
- Gobeil SMC [27]
- Sewall LM [27]
- Andersen KG [26]
- Caradonna TM [26]
- Volchkov V [26]
- Gunn BM [26]
- Pauthner MG [26]
- Bock KW [26]
- Crowe Jr. Je [26]
- Murrell B [26]
- Melo M [26]
- Melo MB [26]
- Upadhyay AA [26]
- Halfmann PJ [26]
- Han J [26]
- Martin JT [26]
- Schendel SL [26]
- Macintyre AN [26]
- Davis CW [26]
- Rijal P [26]
- Chretien D [24]
- Rantalainen K [24]
- Lee JH [23]
- Kong L [23]
- Leon AN [22]
- Sashital DG [22]
- Pauthner M [22]
Journal
- NAT COMMUN [240]
- CELL REP [191]
- J MOL BIOL [155]
- TO BE PUBLISHED [143]
- CELL [122]
- SCI REP [96]
- PNAS [71]
- BIORXIV [68]
- ELIFE [66]
- STRUCTURE [56]
- PLOS PATHOG [54]
- NATURE [53]
- SCI TRANSL MED [52]
- J BIOL CHEM [51]
- IMMUNITY [47]
- CELL REP METHODS [36]
- J VIROL [36]
- NAT STRUCT MOL BIOL [31]
- J STRUCT BIOL [29]
- SCI ADV [27]
- EMBO J [23]
- SCIENCE [21]
- BIOCHIM BIOPHYS ACTA MOL CELL BIOL LIPIDS [16]
- MOL CELL [15]
- NPJ VACCINES [13]
- J LIPID RES [12]
- SCI IMMUNOL [12]
- J BACTERIOL [11]
- NAT IMMUNOL [11]
- NUCLEIC ACIDS RES [10]
- MBIO [9]
- PLOS ONE [9]
- EMBO REP [8]
- MOL MICROBIOL [8]
- NAT BIOMED ENG [8]
- FEBS J [7]
- J CELL BIOL [7]
- NAT CELL BIOL [7]
- VIROLOGY [7]
- ISCIENCE [5]
- MOL BIOL CELL [5]
- NAT CARDIOVASC RES [5]
- NAT MICROBIOL [5]
- ANAL CHEM [4]
- CELL HOST MICROBE [4]
- COMMUN BIOL [4]
- J GEN VIROL [4]
- J MICROSC [4]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [3]
- BIOCHIM BIOPHYS ACTA [3]
- CELL REP MED [3]
- DNA REPAIR (AMST) [3]
- J INFECT DIS [3]
- J VIS EXP [3]
- MICROSC MICROANAL [3]
- RNA [3]
- VIRUSES [3]
- BIOCHEMISTRY [2]
- BIOPHYS J [2]
- CELL RES [2]
- DEV CELL [2]
- INT J MOL SCI [2]
- MOL BIOMED [2]
- MOL CELLS [2]
- NAT CHEM BIOL [2]
- PLOS BIOL [2]
- PROTEIN CELL [2]
- PROTEIN SCI [2]
- ACS CHEM BIOL [1]
- APPL ENVIRON MICROBIOL [1]
- APPLIED CELL BIOLOGY [1]
- CELL CYCLE [1]
- FRONT MICROBIOL [1]
- GENES DEV [1]
- J GEN PHYSIOL [1]
- J SCI REP [1]
- JCI INSIGHT [1]
- MICROB BIOTECHNOL [1]
- MOL CELL BIOL [1]
- MOL PSYCHIATRY [1]
- NAT PLANTS [1]
- NEURON [1]
- NPJ BIOFILMS MICROBIOMES [1]
- NPJ BREAST CANCER [1]
- OPEN BIOL [1]
- PLOS GENET [1]
- RETROVIROLOGY [1]
- SMALL [1]
- TRAFFIC [1]
- VACCINE [1]
- VIRUS RES [1]
Software
- RELION [466]
- TOMOCTF [233]
- IMOD [164]
- CRYOSPARC [132]
- IPET [108]
- GCTF [97]
- SPIDER [82]
- CTFFIND [66]
- CHIMERA [60]
- EMAN2 [59]
- EMAN [42]
- EMAN2, SPARX [38]
- SPARX [20]
- XMIPP [19]
- SPIDER, APPION [17]
- MULTI-PATH SA [16]
- PEET [16]
- IPET, FETR, SPIDER, IMOD, EMAN, AND, EMAN2 [14]
- IMAGIC [13]
- UCSF CHIMERA [13]
- MRC [12]
- PHOELIX, SUPRIM [10]
- AUTO3DEM [9]
- MRC, IMAGIC, SPIDER [9]
- PROTOMO [9]
- BSOFT [8]
- EMIRA [8]
- IMAGIC, SPIDER [7]
- SITUS [7]
- CHIMERA, SITUS [6]
- CTFIND3 [6]
- EMAN, SPARX [6]
- EMAN1 [6]
- EMAN2, SPIDER, BESPOKE-2D-ALIGNMENT, BESPOKE-X-AND-Y-SHIFTING [6]
- EMAN2, SPIDER, XMIPP [6]
- ETOMO [5]
- CISTEM [4]
- EMAN, IPET [4]
- EMAN2, XMIPP, IMAGIC [4]
- ETOMO, IMOD [4]
- IMAGIC, FREALIGN [4]
- IPET, AND, FETR [4]
- MRA/MSA [4]
- PFT - EM3DR [4]
- SPIDER,FREALIGN [4]
- APPION, SPIDER, XMIPP, EMAN1 [3]
- CTFFIND3 [3]
- EMAN, SPIDER [3]
- EMAN2, RELION [3]
- EMAN2/SPARX, MULTI-MODEL [3]
- ETOMO, FROM, IMOD, SOFTWARE [3]
- IMAGIC SPIDER [3]
- MANUAL [3]
- PFT EM3DR [3]
- SERIALEM [3]
- SITUS,CHIMERA [3]
- SPARX, EMAN2 [3]
- SPIDER, FREALIGN [3]
- SPIDER, IHRSR [3]
- 2DX [2]
- AMIRA, IMOD [2]
- APPION, SPIDER, XMIPP, EMAN1, EMAN2 [2]
- APPION, SPIDER, XMIPP, EMAN1, SPARX [2]
- AUTO3DEM, RELION, EMAN2 [2]
- CTFFIND4 [2]
- E2HELIXBOXER [2]
- EM3DR2 [2]
- EM3DR2, PFT2, CTFMIX [2]
- EMAN BOXER [2]
- EMAN, XMIPP [2]
- EMAN2, EMAN1 [2]
- EMAN2/SPARX [2]
- EOS [2]
- FOLDHUNTER [2]
- FREALIGN [2]
- INDIVIDUAL-PARTCILE, ELECTRON, TOMOGRPHY, IPET , AND, FETR [2]
- PFT2 AND EM3DR2 [2]
- PFT2, EM3DR2 [2]
- SITUS, CHIMERA [2]
- SPHIRE [2]
- SPIDER, EMAN [2]
- SPIDER, EMAN2 [2]
- XMIPP, SPIDER [2]
- 2DX, BHP [1]
- APPION HELIX BOXER [1]
- APPION, SPIDER, EMAN1, XMIPP [1]
- APPION, SPIDER, EMAN1, XMIPP, EMAN2 [1]
- BSOFT, PFT2, EM3DR2 [1]
- BUSTER-TNT [1]
- CHIMERA, NAMD [1]
- CHIMERA,SCULPTOR [1]
- CHMIERA [1]
- COLORES [1]
- COOT [1]
- EMAN SPIDER [1]
- EMAN, EMAN2, XMIPP, IMAGIC [1]
- EMAN, IMAGIC [1]
- EMAN, SPIDER, XMIPP [1]
- EMAN2, RELION, SPIDER [1]
- EMAN2, SPIDER, BRANDEIS, HELICAL, PACKAGE, IHRSR [1]
Microscope
- FEI TECNAI SPIRIT [683]
- ZEISS LIBRA120PLUS [478]
- FEI TECNAI 12 [225]
- FEI TECNAI 20 [78]
- TFS TALOS L120C [75]
- JEOL 2100 [63]
- FEI/PHILIPS EM420 [46]
- FEI/PHILIPS CM120T [35]
- FEI TITAN KRIOS [33]
- FEI/PHILIPS CM200T [20]
- JEOL 1400 [20]
- JEOL 4000 [17]
- JEOL 4000EX [17]
- TFS KRIOS [10]
- FEI/PHILIPS CM300FEG/T [9]
- FEI TECNAI F20 [8]
- FEI/PHILIPS CM12 [8]
- JEOL 2010 [7]
- JEOL 1200EX [5]
- JEOL 1200EXII [5]
- HITACHI H3000 UHVEM [4]
- JEOL 1230 [4]
- HITACHI H-9500SD [3]
- JEOL 1000EES [3]
- JEOL 1200 [3]
- FEI TALOS ARCTICA [2]
- FEI TECNAI SPHERA [2]
- JEOL 2010HC [2]
- OTHER [2]
- TFS GLACIOS [2]
- TFS TALOS [2]
- FEI TECNAI ARCTICA [1]
- FEI TECNAI F30 [1]
- FEI TITAN [1]
- FEI/PHILIPS CM200FEG/UT [1]
- HITACHI H7600 [1]
- JEOL 2010HT [1]
- JEOL 2011 [1]
- JEOL 2100F [1]
- JEOL 3000SFF [1]
Electron Source
- LAB6 [1877]
- FIELD EMISSION GUN [1]
Film or detector model
- GATAN ULTRASCAN 4000 4K X 4K [587]
- TVIPS TEMCAM-F416 4K X 4K [375]
- FEI EAGLE 4K X 4K [295]
- OTHER [163]
- KODAK SO-163 FILM [139]
- FEI CETA 4K X 4K [82]
- FEI EAGLE 2K X 2K [41]
- GATAN ULTRASCAN 1000 2K X 2K [20]
- GATAN K3 6K X 4K [16]
- TVIPS TEMCAM-F415 4K X 4K [16]
- TVIPS TEMCAM-F216 2K X 2K [15]
- GENERIC GATAN [13]
- GATAN K2 SUMMIT 4K X 4K [11]
- GENERIC CCD [10]
- GENERIC CCD 2K X 2K [10]
- GATAN K3 BIOCONTINUUM 6K X 4K [9]
- GATAN K3 BIOQUANTUM 6K X 4K [8]
- GENERIC TVIPS 4K X 4K [7]
- AGFA SCIENTA FILM [5]
- FEI FALCON III 4K X 4K [5]
- TVIPS TEMCAM-F224 2K X 2K [5]
- GATAN ORIUS SC200 2K X 2K [4]
- GATAN ALPINE 2.3K X 3.2K [3]
- GATAN K2 IS 4K X 4K [3]
- GENERIC GATAN 4K X 4K [2]
- GENERIC IMAGE PLATES [2]
- TFS FALCON 4I 4K X 4K [2]
- DIRECT ELECTRON DE-10 5K X 4K [1]
- DIRECT ELECTRON DE-20 5K X 3K [1]
- FEI FALCON IV 4K X 4K [1]
- GATAN ORIUS SC1000 4K X 2.7K [1]
- KODAK 4489 FILM [1]
EMPIAR Experiment type
- EMDB [1]
EMPIAR Image category
- MICROGRAPHS - MULTIFRAME [1]
External links
- PDB [1877]
- UniProt [198]
- PDBe-Kb [186]
- AlphaFold DB [183]
- Gene Ontology [67]
- InterPro [64]
- Pfam [47]
- Complex Portal [43]
- ChEBI [32]
- ChEMBL [31]
- DrugBank [31]
- EMPIAR [24]
- EMDB [1]
Resolution: 3.55 Å
EM Method: Single-particle
Fitted PDBs: 9zfy
Q-score: 0.482
Jain M, Cannac F, Agrawal S, Lee WH, Loeffler JR, Fernandez-Quintero ML, Gonzalez-Paez GE, Moskovitz R, Ward AB, Wilson IA
PLoS Pathog (2026) 22 pp. e1014243-e1014243 [ DOI: doi:10.1371/journal.ppat.1014243 Pubmed: 42234703 ]
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 9zfz
Q-score: 0.479
Jain M, Cannac F, Agrawal S, Lee WH, Loeffler JR, Fernandez-Quintero ML, Gonzalez-Paez GE, Moskovitz R, Ward AB, Wilson IA
PLoS Pathog (2026) 22 pp. e1014243-e1014243 [ DOI: doi:10.1371/journal.ppat.1014243 Pubmed: 42234703 ]
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 9rws
Q-score: 0.503
Vilchez-Garcia J, Martinez-Jimenez A, Jiang H, Luengo M, Ochoa-Lizarralde B, Lopez-Alonso JP, Perez-Lorente J, Bartoccioni P, Estevez R, Guallar V, Errasti-Murugarren E, Ubarretxena-Belandia I, Tascon I
Sci Adv (2026) 12 pp. eaec1241-eaec1241 [ Pubmed: 42213839 DOI: doi:10.1126/sciadv.aec1241 ]
Resolution: 2.83 Å
EM Method: Single-particle
Fitted PDBs: 9rwt
Q-score: 0.511
Vilchez-Garcia J, Martinez-Jimenez A, Jiang H, Luengo M, Ochoa-Lizarralde B, Lopez-Alonso JP, Perez-Lorente J, Bartoccioni P, Estevez R, Guallar V, Errasti-Murugarren E, Ubarretxena-Belandia I, Tascon I
Sci Adv (2026) 12 pp. eaec1241-eaec1241 [ Pubmed: 42213839 DOI: doi:10.1126/sciadv.aec1241 ]
EM Method: Tomography
Voichek M, Bernhard A, Novatchkova M, Handle D, Moeseneder P, Rafanel B, Duchek P, Senti KA, Brennecke J
bioRxiv () [ DOI: doi:10.1101/2025.03.14.642691 ]
Resolution: 20.0 Å
EM Method: Single-particle
Fisher A, Corcoran M, Chernyshev M, Brouwer PJM, Gillespie R, Nicoletto A, Loeffler JR, Ferguson JA, Rodriguez AJ, Narang S, Adori M, Angeletti D, van Gils MJ, Castro Dopico X, Kanekiyo M, Ward AB, Han J, Karlsson Hedestam GB
To Be Published
Resolution: 20.0 Å
EM Method: Single-particle
Fisher A, Corcoran M, Chernyshev M, Brouwer PJM, Gillespie R, Nicoletto A, Loeffler JR, Ferguson JA, Rodriguez AJ, Narang S, Adori M, Angeletti D, van Gils MJ, Castro Dopico X, Kanekiyo M, Ward AB, Han J, Karlsson Hedestam GB
To Be Published
Resolution: 20.0 Å
EM Method: Single-particle
Fisher A, Corcoran M, Chernyshev M, Brouwer PJM, Gillespie R, Nicoletto A, Loeffler JR, Ferguson JA, Rodriguez AJ, Narang S, Adori M, Angeletti D, van Gils MJ, Castro Dopico X, Kanekiyo M, Ward AB, Han J, Karlsson Hedestam GB
To Be Published
EM Method: Tomography
Liu J, Zhang M, Wang S, Hu Z, Wu H, Gang O, Ren G
To Be Published
Resolution: 18.99 Å
EM Method: Single-particle
Dosey A, Dadonaite B, Gillespie RA, Leaf EM, Vukovich MJ, McGowan J, Grey E, Muramatsu H, Jun RHJ, Pardi N, Kanekiyo M, Bloom JD, King NP
Sci Transl Med (2026) 18 pp. eaea8770-eaea8770 [ DOI: doi:10.1126/scitranslmed.aea8770 Pubmed: 41779867 ]
Filter By
Current Database
- EMDB [1877]
- EMPIAR [1]
Current status
- REL [1878]
Sample type
- Complex [1232]
- Protein [509]
- Sample [455]
- Cellular component [252]
- Virus [93]
- Ligand [40]
- DNA [25]
- Other [16]
- Cell [10]
- RNA [5]
- Tissue [2]
Organism
- Homo sapiens [539]
- Synthetic construct [234]
- Human immunodeficiency virus 1 [168]
- Bos taurus [146]
- Macaca mulatta [121]
- Enterobacteria phage m13 [114]
- Mus musculus [90]
- Severe acute respiratory syndrome coronavirus [72]
- Saccharomyces cerevisiae [69]
- Oryctolagus cuniculus [68]
- Influenza a virus [57]
- Escherichia coli [31]
- (no species) [30]
- Zaire ebolavirus [29]
- Human immunodeficiency virus [24]
- Rattus norvegicus [23]
- Rice dwarf virus [17]
- Escherichia coli [17]
- Plasmodium falciparum [15]
- Human mastadenovirus d [14]
- Betacoronavirus 1 [14]
- Simian-human immunodeficiency virus [14]
- Drosophila melanogaster [14]
- Macaca fascicularis [14]
- Porcine epidemic diarrhea virus [13]
- Sus scrofa [13]
- Severe acute respiratory syndrome coronavirus [11]
- Xenopus laevis [11]
- Sus scrofa [11]
- Epstein-barr virus (strain gd1) [10]
- Hepatitis b virus [10]
- Simian immunodeficiency virus [10]
- Ebola virus sp. [10]
- Human immunodeficiency virus 2 [9]
- Shigella flexneri [8]
- Aggregatibacter actinomycetemcomitans [8]
- Gallus gallus [8]
- Escherichia coli [7]
- Avian infectious bursal disease virus [6]
- Hepacivirus c [6]
- Alphainfluenzavirus influenzae [6]
- Alphapapillomavirus 9 [6]
- Human herpesvirus 8 [6]
- Severe acute respiratory syndrome coronavirus [6]
- (no species) [5]
- Unidentified influenza virus [5]
- Synechocystis sp. pcc 6803 [5]
- Alkalihalobacillus halodurans [5]
- Trypanosoma brucei [5]
- Phage gifsy-2 [4]
- Zaire ebolavirus [4]
- Archaeoglobus fulgidus [4]
- Enterovirus b [4]
- Unidentified adenovirus [3]
- Escherichia phage lambda [3]
- Middle east respiratory syndrome-related coronavirus [3]
- Desulfofustis sp. pb-srb1 [3]
- Tokyovirus a1 [3]
- Desulfacinum sp. [3]
- Thermotoga maritima [3]
- Lactococcus phage p2 [3]
- Thermus thermophilus [3]
- Pseudomonas aeruginosa [3]
- Human coronavirus hku1 [3]
- Photorhabdus luminescens [3]
- Lactococcus phage tuc2009 [3]
- Arabidopsis thaliana [3]
- Human coronavirus hku1 [3]
- Influenza b virus [3]
- Triatoma virus [2]
- Human cytomegalovirus [2]
- Canine mastadenovirus a [2]
- Mamastrovirus 1 [2]
- Hiv-1 vector pnl4-3 [2]
- (no species) [2]
- Sudan ebolavirus [2]
- Pseudomonas aeruginosa [2]
- Mycoplasma genitalium [2]
- Severe acute respiratory syndrome coronavirus [2]
- Synechococcus elongatus [2]
- Alphapapillomavirus 9 [2]
- Myxococcus xanthus [2]
- Plasmodium falciparum [2]
- Methanococcus maripaludis [2]
- Serratia entomophila [2]
- Pichia kudriavzevii [2]
- Neurospora crassa [2]
- Pyrococcus horikoshii [2]
- (no species) [2]
- Salimicrobium flavidum [2]
- Limulus polyphemus [2]
- (no species) [2]
- Magnetospirillum magneticum [2]
- Acidithiobacillus ferrooxidans [2]
- Ovis aries [2]
- Cricetulus griseus [1]
- (no species) [1]
- Cavia porcellus [1]
- Orf virus [1]
- Hepatitis b virus [1]
EM Method
- Single-particle [1265]
- Tomography [516]
- Subtomogram averaging [49]
- Helical reconstruction [41]
- Electron Crystallography [6]
Resolution
- < 2Å [3]
- ≥ 2Å and < 3Å [20]
- ≥ 3Å and < 4Å [19]
- ≥ 4Å and < 5Å [7]
- ≥ 5Å and < 6Å [1]
- ≥ 6Å and < 8Å [8]
- ≥ 8Å and < 12Å [65]
- ≥ 12Å and < 16Å [303]
- ≥ 16Å and < 20Å [276]
- ≥ 20Å and < 30Å [743]
- ≥ 30Å [373]
Model molecular weight
- 0-50 kDa [5]
- 50-100 kDa [8]
- 100-250 kDa [32]
- 250-500 kDa [23]
- 500-1000 kDa [11]
- 1-2 MDa [4]
- 2-5 MDa [2]
- 5-10 MDa [7]
- > 10 MDa [8]
Release Date
- 2026 [26]
- 2025 [157]
- 2024 [86]
- 2023 [102]
- 2022 [135]
- 2021 [72]
- 2020 [233]
- 2019 [173]
- 2018 [310]
- 2017 [61]
- 2016 [130]
- 2015 [71]
- 2014 [65]
- 2013 [52]
- 2012 [37]
- 2011 [36]
- 2010 [32]
- 2009 [19]
- 2008 [6]
- 2007 [39]
- 2006 [7]
- 2005 [8]
- 2004 [6]
- 2003 [15]
Author by name
- Ward AB [631]
- Ren G [484]
- Liu J [432]
- Burton DR [259]
- Lei D [233]
- Cottrell CA [203]
- Sewall LM [183]
- Turner HL [160]
- Rudenko G [156]
- Liu JF [151]
- White MA [151]
- Torres JL [150]
- Wilson IA [147]
- Misra A [130]
- Reddy S [130]
- Nogal B [121]
- Jackson AM [116]
- Su H [116]
- Castro C [115]
- Castro CE [115]
- Huang C [115]
- Huang CM [115]
- Marras A [115]
- Marras AE [115]
- Reddy MVVVS [115]
- Sok D [115]
- Su HJ [115]
- Zhou L [115]
- Han J [112]
- Ozorowski G [107]
- Zhao F [106]
- Bangaru S [105]
- Liu H [104]
- Sanders RW [99]
- Kanekiyo M [93]
- Zhang M [91]
- Lee WH [89]
- Hangartner L [87]
- Montefiori DC [87]
- Richey ST [86]
- Kirchdoerfer RN [83]
- Yang YR [83]
- Schief WR [82]
- Lei M [80]
- Marino JP [80]
- Bianchi M [79]
- Krammer F [78]
- Wu H [78]
- Hu Z [75]
- King NP [75]
- Crotty S [73]
- Wang S [72]
- Gang O [71]
- Irvine DJ [65]
- Gillespie RA [64]
- Wang Y [63]
- Antanasijevic A [62]
- Torrents De La Pena A [61]
- Copps J [60]
- Rodriguez AJ [60]
- Silvestri G [60]
- Zhang L [60]
- Carnathan DG [58]
- Haynes BF [56]
- De Val N [56]
- Yuan M [55]
- Van Gils Mj [54]
- Perrett HR [53]
- Bastidas R [52]
- Moore JP [51]
- Dosey A [50]
- Veesler D [50]
- Wiehe K [50]
- Baric RS [48]
- Schafer A [48]
- Ward A [48]
- Crispin M [47]
- Ellebedy AH [47]
- Schmitz AJ [47]
- Acharya P [45]
- Allen JD [45]
- Kwong PD [45]
- Saunders KO [45]
- Andrabi R [44]
- Mohanty S [44]
- Murin CD [44]
- Shaw AC [44]
- De Paiva Froes Rocha R [44]
- Alam SM [43]
- Berndsen ZT [43]
- Chiu W [43]
- Edwards RJ [43]
- Mansouri K [43]
- Moody MA [43]
- Graham BS [41]
- Saphire EO [41]
- Groschel B [40]
- Lu X [40]
- Parks R [40]
- Zhou T [40]
Author by ORCID
- Ren G [448]
- Liu J [322]
- Ward AB [260]
- Cottrell CA [203]
- Lei D [133]
- White MA [132]
- Torres JL [119]
- Zhou L [115]
- Castro CE [115]
- Marras AE [115]
- Su HJ [115]
- Kanekiyo M [90]
- Schief WR [82]
- Lei M [80]
- King NP [75]
- Ozorowski G [63]
- Burton DR [62]
- Carnathan DG [58]
- Bangaru S [57]
- Perrett HR [53]
- Yuan M [52]
- Krammer F [52]
- Lee WH [49]
- Crispin M [47]
- Crotty S [47]
- Schmitz AJ [47]
- Torrents De La Pena A [45]
- Allen JD [45]
- Wilson IA [41]
- Dosey A [40]
- Andrabi R [40]
- Chiu W [40]
- Edwards RJ [40]
- Yong P [39]
- Tse LV [37]
- Sanders RW [37]
- Irvine DJ [37]
- Kwong PD [37]
- Copps J [37]
- Hauser BM [36]
- De Paiva Froes Rocha R [36]
- Van Gils Mj [36]
- Mansouri K [35]
- Baker D [35]
- Zhou JQ [35]
- Brent RI [35]
- Turner JS [35]
- Alsoussi WB [35]
- Mcintire KM [35]
- Lei T [35]
- Tilahun K [35]
- Kleinstein SH [35]
- Antanasijevic A [33]
- Georgeson E [32]
- Jackson AM [32]
- Chopde A [32]
- Dye JM [31]
- Pallesen J [31]
- Zhang L [31]
- Zhou P [30]
- Chandran K [30]
- Rogers TF [29]
- Musharrafieh R [29]
- Safonova Y [29]
- Parren M [29]
- Sempowski GD [29]
- Beutler N [29]
- He WT [29]
- Song G [28]
- Crowe Jr Je [28]
- Zhao F [28]
- Callaghan S [28]
- Lee KK [27]
- Gobeil SMC [27]
- Sewall LM [27]
- Andersen KG [26]
- Caradonna TM [26]
- Volchkov V [26]
- Gunn BM [26]
- Pauthner MG [26]
- Bock KW [26]
- Crowe Jr. Je [26]
- Murrell B [26]
- Melo M [26]
- Melo MB [26]
- Upadhyay AA [26]
- Halfmann PJ [26]
- Han J [26]
- Martin JT [26]
- Schendel SL [26]
- Macintyre AN [26]
- Davis CW [26]
- Rijal P [26]
- Chretien D [24]
- Rantalainen K [24]
- Lee JH [23]
- Kong L [23]
- Leon AN [22]
- Sashital DG [22]
- Pauthner M [22]
Journal
- NAT COMMUN [240]
- CELL REP [191]
- J MOL BIOL [155]
- TO BE PUBLISHED [143]
- CELL [122]
- SCI REP [96]
- PNAS [71]
- BIORXIV [68]
- ELIFE [66]
- STRUCTURE [56]
- PLOS PATHOG [54]
- NATURE [53]
- SCI TRANSL MED [52]
- J BIOL CHEM [51]
- IMMUNITY [47]
- CELL REP METHODS [36]
- J VIROL [36]
- NAT STRUCT MOL BIOL [31]
- J STRUCT BIOL [29]
- SCI ADV [27]
- EMBO J [23]
- SCIENCE [21]
- BIOCHIM BIOPHYS ACTA MOL CELL BIOL LIPIDS [16]
- MOL CELL [15]
- NPJ VACCINES [13]
- J LIPID RES [12]
- SCI IMMUNOL [12]
- J BACTERIOL [11]
- NAT IMMUNOL [11]
- NUCLEIC ACIDS RES [10]
- MBIO [9]
- PLOS ONE [9]
- EMBO REP [8]
- MOL MICROBIOL [8]
- NAT BIOMED ENG [8]
- FEBS J [7]
- J CELL BIOL [7]
- NAT CELL BIOL [7]
- VIROLOGY [7]
- ISCIENCE [5]
- MOL BIOL CELL [5]
- NAT CARDIOVASC RES [5]
- NAT MICROBIOL [5]
- ANAL CHEM [4]
- CELL HOST MICROBE [4]
- COMMUN BIOL [4]
- J GEN VIROL [4]
- J MICROSC [4]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [3]
- BIOCHIM BIOPHYS ACTA [3]
- CELL REP MED [3]
- DNA REPAIR (AMST) [3]
- J INFECT DIS [3]
- J VIS EXP [3]
- MICROSC MICROANAL [3]
- RNA [3]
- VIRUSES [3]
- BIOCHEMISTRY [2]
- BIOPHYS J [2]
- CELL RES [2]
- DEV CELL [2]
- INT J MOL SCI [2]
- MOL BIOMED [2]
- MOL CELLS [2]
- NAT CHEM BIOL [2]
- PLOS BIOL [2]
- PROTEIN CELL [2]
- PROTEIN SCI [2]
- ACS CHEM BIOL [1]
- APPL ENVIRON MICROBIOL [1]
- APPLIED CELL BIOLOGY [1]
- CELL CYCLE [1]
- FRONT MICROBIOL [1]
- GENES DEV [1]
- J GEN PHYSIOL [1]
- J SCI REP [1]
- JCI INSIGHT [1]
- MICROB BIOTECHNOL [1]
- MOL CELL BIOL [1]
- MOL PSYCHIATRY [1]
- NAT PLANTS [1]
- NEURON [1]
- NPJ BIOFILMS MICROBIOMES [1]
- NPJ BREAST CANCER [1]
- OPEN BIOL [1]
- PLOS GENET [1]
- RETROVIROLOGY [1]
- SMALL [1]
- TRAFFIC [1]
- VACCINE [1]
- VIRUS RES [1]
Software
- RELION [466]
- TOMOCTF [233]
- IMOD [164]
- CRYOSPARC [132]
- IPET [108]
- GCTF [97]
- SPIDER [82]
- CTFFIND [66]
- CHIMERA [60]
- EMAN2 [59]
- EMAN [42]
- EMAN2, SPARX [38]
- SPARX [20]
- XMIPP [19]
- SPIDER, APPION [17]
- MULTI-PATH SA [16]
- PEET [16]
- IPET, FETR, SPIDER, IMOD, EMAN, AND, EMAN2 [14]
- IMAGIC [13]
- UCSF CHIMERA [13]
- MRC [12]
- PHOELIX, SUPRIM [10]
- AUTO3DEM [9]
- MRC, IMAGIC, SPIDER [9]
- PROTOMO [9]
- BSOFT [8]
- EMIRA [8]
- IMAGIC, SPIDER [7]
- SITUS [7]
- CHIMERA, SITUS [6]
- CTFIND3 [6]
- EMAN, SPARX [6]
- EMAN1 [6]
- EMAN2, SPIDER, BESPOKE-2D-ALIGNMENT, BESPOKE-X-AND-Y-SHIFTING [6]
- EMAN2, SPIDER, XMIPP [6]
- ETOMO [5]
- CISTEM [4]
- EMAN, IPET [4]
- EMAN2, XMIPP, IMAGIC [4]
- ETOMO, IMOD [4]
- IMAGIC, FREALIGN [4]
- IPET, AND, FETR [4]
- MRA/MSA [4]
- PFT - EM3DR [4]
- SPIDER,FREALIGN [4]
- APPION, SPIDER, XMIPP, EMAN1 [3]
- CTFFIND3 [3]
- EMAN, SPIDER [3]
- EMAN2, RELION [3]
- EMAN2/SPARX, MULTI-MODEL [3]
- ETOMO, FROM, IMOD, SOFTWARE [3]
- IMAGIC SPIDER [3]
- MANUAL [3]
- PFT EM3DR [3]
- SERIALEM [3]
- SITUS,CHIMERA [3]
- SPARX, EMAN2 [3]
- SPIDER, FREALIGN [3]
- SPIDER, IHRSR [3]
- 2DX [2]
- AMIRA, IMOD [2]
- APPION, SPIDER, XMIPP, EMAN1, EMAN2 [2]
- APPION, SPIDER, XMIPP, EMAN1, SPARX [2]
- AUTO3DEM, RELION, EMAN2 [2]
- CTFFIND4 [2]
- E2HELIXBOXER [2]
- EM3DR2 [2]
- EM3DR2, PFT2, CTFMIX [2]
- EMAN BOXER [2]
- EMAN, XMIPP [2]
- EMAN2, EMAN1 [2]
- EMAN2/SPARX [2]
- EOS [2]
- FOLDHUNTER [2]
- FREALIGN [2]
- INDIVIDUAL-PARTCILE, ELECTRON, TOMOGRPHY, IPET , AND, FETR [2]
- PFT2 AND EM3DR2 [2]
- PFT2, EM3DR2 [2]
- SITUS, CHIMERA [2]
- SPHIRE [2]
- SPIDER, EMAN [2]
- SPIDER, EMAN2 [2]
- XMIPP, SPIDER [2]
- 2DX, BHP [1]
- APPION HELIX BOXER [1]
- APPION, SPIDER, EMAN1, XMIPP [1]
- APPION, SPIDER, EMAN1, XMIPP, EMAN2 [1]
- BSOFT, PFT2, EM3DR2 [1]
- BUSTER-TNT [1]
- CHIMERA, NAMD [1]
- CHIMERA,SCULPTOR [1]
- CHMIERA [1]
- COLORES [1]
- COOT [1]
- EMAN SPIDER [1]
- EMAN, EMAN2, XMIPP, IMAGIC [1]
- EMAN, IMAGIC [1]
- EMAN, SPIDER, XMIPP [1]
- EMAN2, RELION, SPIDER [1]
- EMAN2, SPIDER, BRANDEIS, HELICAL, PACKAGE, IHRSR [1]
Microscope
- FEI TECNAI SPIRIT [683]
- ZEISS LIBRA120PLUS [478]
- FEI TECNAI 12 [225]
- FEI TECNAI 20 [78]
- TFS TALOS L120C [75]
- JEOL 2100 [63]
- FEI/PHILIPS EM420 [46]
- FEI/PHILIPS CM120T [35]
- FEI TITAN KRIOS [33]
- FEI/PHILIPS CM200T [20]
- JEOL 1400 [20]
- JEOL 4000 [17]
- JEOL 4000EX [17]
- TFS KRIOS [10]
- FEI/PHILIPS CM300FEG/T [9]
- FEI TECNAI F20 [8]
- FEI/PHILIPS CM12 [8]
- JEOL 2010 [7]
- JEOL 1200EX [5]
- JEOL 1200EXII [5]
- HITACHI H3000 UHVEM [4]
- JEOL 1230 [4]
- HITACHI H-9500SD [3]
- JEOL 1000EES [3]
- JEOL 1200 [3]
- FEI TALOS ARCTICA [2]
- FEI TECNAI SPHERA [2]
- JEOL 2010HC [2]
- OTHER [2]
- TFS GLACIOS [2]
- TFS TALOS [2]
- FEI TECNAI ARCTICA [1]
- FEI TECNAI F30 [1]
- FEI TITAN [1]
- FEI/PHILIPS CM200FEG/UT [1]
- HITACHI H7600 [1]
- JEOL 2010HT [1]
- JEOL 2011 [1]
- JEOL 2100F [1]
- JEOL 3000SFF [1]
Electron Source
- LAB6 [1877]
- FIELD EMISSION GUN [1]
Film or detector model
- GATAN ULTRASCAN 4000 4K X 4K [587]
- TVIPS TEMCAM-F416 4K X 4K [375]
- FEI EAGLE 4K X 4K [295]
- OTHER [163]
- KODAK SO-163 FILM [139]
- FEI CETA 4K X 4K [82]
- FEI EAGLE 2K X 2K [41]
- GATAN ULTRASCAN 1000 2K X 2K [20]
- GATAN K3 6K X 4K [16]
- TVIPS TEMCAM-F415 4K X 4K [16]
- TVIPS TEMCAM-F216 2K X 2K [15]
- GENERIC GATAN [13]
- GATAN K2 SUMMIT 4K X 4K [11]
- GENERIC CCD [10]
- GENERIC CCD 2K X 2K [10]
- GATAN K3 BIOCONTINUUM 6K X 4K [9]
- GATAN K3 BIOQUANTUM 6K X 4K [8]
- GENERIC TVIPS 4K X 4K [7]
- AGFA SCIENTA FILM [5]
- FEI FALCON III 4K X 4K [5]
- TVIPS TEMCAM-F224 2K X 2K [5]
- GATAN ORIUS SC200 2K X 2K [4]
- GATAN ALPINE 2.3K X 3.2K [3]
- GATAN K2 IS 4K X 4K [3]
- GENERIC GATAN 4K X 4K [2]
- GENERIC IMAGE PLATES [2]
- TFS FALCON 4I 4K X 4K [2]
- DIRECT ELECTRON DE-10 5K X 4K [1]
- DIRECT ELECTRON DE-20 5K X 3K [1]
- FEI FALCON IV 4K X 4K [1]
- GATAN ORIUS SC1000 4K X 2.7K [1]
- KODAK 4489 FILM [1]
EMPIAR Experiment type
- EMDB [1]
EMPIAR Image category
- MICROGRAPHS - MULTIFRAME [1]
External links
- PDB [1877]
- UniProt [198]
- PDBe-Kb [186]
- AlphaFold DB [183]
- Gene Ontology [67]
- InterPro [64]
- Pfam [47]
- Complex Portal [43]
- ChEBI [32]
- ChEMBL [31]
- DrugBank [31]
- EMPIAR [24]
- EMDB [1]